View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1697_low_10 (Length: 237)

Name: NF1697_low_10
Description: NF1697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1697_low_10
NF1697_low_10
[»] chr7 (51 HSPs)
chr7 (1-220)||(11242584-11242803)
chr7 (1-106)||(11281415-11281517)
chr7 (1-106)||(11268680-11268789)
chr7 (104-220)||(11268478-11268595)
chr7 (104-196)||(11281602-11281694)
chr7 (19-102)||(6847702-6847787)
chr7 (104-188)||(1864610-1864694)
chr7 (27-87)||(1941581-1941641)
chr7 (104-177)||(14925823-14925896)
chr7 (104-177)||(15349289-15349362)
chr7 (115-178)||(1941460-1941523)
chr7 (115-179)||(9046420-9046484)
chr7 (109-188)||(6847529-6847608)
chr7 (35-81)||(6712334-6712380)
chr7 (26-80)||(8787178-8787232)
chr7 (104-162)||(15523336-15523394)
chr7 (35-84)||(15061402-15061451)
chr7 (19-82)||(1751127-1751190)
chr7 (26-81)||(3376405-3376460)
chr7 (26-81)||(21005415-21005470)
chr7 (35-81)||(538157-538203)
chr7 (35-81)||(545031-545077)
chr7 (104-162)||(679216-679274)
chr7 (35-81)||(821389-821435)
chr7 (35-81)||(826402-826448)
chr7 (35-81)||(828413-828459)
chr7 (35-81)||(4158572-4158618)
chr7 (35-81)||(4466554-4466600)
chr7 (35-81)||(5840819-5840865)
chr7 (35-81)||(8713137-8713183)
chr7 (35-81)||(8718641-8718687)
chr7 (26-80)||(8780339-8780393)
chr7 (35-81)||(9004766-9004812)
chr7 (35-81)||(9009751-9009797)
chr7 (35-81)||(9258523-9258569)
chr7 (35-81)||(9311684-9311730)
chr7 (35-81)||(12548205-12548251)
chr7 (35-81)||(14229848-14229894)
chr7 (35-81)||(15916190-15916236)
chr7 (35-81)||(15924499-15924545)
chr7 (35-81)||(16330782-16330828)
chr7 (35-81)||(18389808-18389854)
chr7 (35-81)||(19014539-19014585)
chr7 (35-81)||(19364547-19364593)
chr7 (35-81)||(23203939-23203985)
chr7 (35-81)||(23510066-23510112)
chr7 (26-80)||(33609867-33609921)
chr7 (35-81)||(37100257-37100303)
chr7 (26-80)||(39388877-39388931)
chr7 (19-87)||(6531399-6531468)
chr7 (35-80)||(15066491-15066536)
[»] chr8 (34 HSPs)
chr8 (19-103)||(9798347-9798431)
chr8 (112-178)||(13539591-13539657)
chr8 (112-178)||(13684817-13684883)
chr8 (35-81)||(31469554-31469600)
chr8 (112-188)||(9798174-9798251)
chr8 (33-81)||(9317986-9318034)
chr8 (116-156)||(17315222-17315262)
chr8 (116-156)||(17337133-17337173)
chr8 (26-81)||(21319566-21319621)
chr8 (26-81)||(22285118-22285173)
chr8 (35-81)||(1685806-1685852)
chr8 (35-81)||(6570471-6570517)
chr8 (35-81)||(14351544-14351590)
chr8 (35-81)||(14878187-14878233)
chr8 (35-81)||(17126987-17127033)
chr8 (35-81)||(18264284-18264330)
chr8 (35-81)||(18273297-18273343)
chr8 (35-81)||(19997535-19997581)
chr8 (35-81)||(20038371-20038417)
chr8 (35-81)||(20044026-20044072)
chr8 (35-81)||(21103528-21103574)
chr8 (35-81)||(22370699-22370745)
chr8 (26-80)||(23503277-23503331)
chr8 (35-81)||(25751599-25751645)
chr8 (35-81)||(26854221-26854267)
chr8 (35-81)||(29325452-29325498)
chr8 (35-81)||(35996235-35996281)
chr8 (35-81)||(43836170-43836216)
chr8 (35-80)||(21105571-21105616)
chr8 (38-87)||(27933242-27933291)
chr8 (35-80)||(29003784-29003829)
chr8 (112-176)||(17337057-17337121)
chr8 (26-82)||(18008279-18008335)
chr8 (35-79)||(21939378-21939422)
[»] chr1 (34 HSPs)
chr1 (19-104)||(27318718-27318803)
chr1 (109-188)||(2130260-2130339)
chr1 (104-185)||(16527352-16527433)
chr1 (104-188)||(15421406-15421490)
chr1 (104-194)||(12726893-12726983)
chr1 (19-82)||(8236384-8236448)
chr1 (19-82)||(17734986-17735049)
chr1 (19-106)||(12727068-12727157)
chr1 (112-170)||(28553606-28553664)
chr1 (137-188)||(27318869-27318920)
chr1 (115-170)||(12788932-12788987)
chr1 (18-84)||(52755236-52755303)
chr1 (35-81)||(21924812-21924858)
chr1 (35-84)||(36850245-36850294)
chr1 (116-156)||(28553553-28553593)
chr1 (26-81)||(25727092-25727147)
chr1 (26-81)||(25735500-25735555)
chr1 (35-81)||(2386379-2386425)
chr1 (35-81)||(3985407-3985453)
chr1 (35-81)||(3990686-3990732)
chr1 (35-81)||(8649018-8649064)
chr1 (35-81)||(13250887-13250933)
chr1 (35-81)||(16485428-16485474)
chr1 (26-84)||(19788171-19788229)
chr1 (35-81)||(27047589-27047635)
chr1 (35-81)||(27911222-27911268)
chr1 (35-81)||(38045486-38045532)
chr1 (35-81)||(41802424-41802470)
chr1 (35-81)||(46143434-46143480)
chr1 (35-81)||(49379537-49379583)
chr1 (35-84)||(17986709-17986758)
chr1 (115-176)||(37627606-37627667)
chr1 (35-80)||(39286525-39286570)
chr1 (35-84)||(41461877-41461926)
[»] chr2 (24 HSPs)
chr2 (19-92)||(21511815-21511888)
chr2 (104-187)||(21511634-21511717)
chr2 (19-72)||(21516314-21516367)
chr2 (104-188)||(21516112-21516196)
chr2 (104-188)||(25592818-25592902)
chr2 (19-82)||(23482639-23482702)
chr2 (104-162)||(24371162-24371220)
chr2 (115-177)||(35406740-35406802)
chr2 (35-84)||(36684447-36684496)
chr2 (26-81)||(23340708-23340763)
chr2 (26-81)||(24507446-24507501)
chr2 (26-81)||(28496586-28496641)
chr2 (35-81)||(20172708-20172754)
chr2 (35-81)||(20282197-20282243)
chr2 (35-81)||(21468340-21468386)
chr2 (26-80)||(23698700-23698754)
chr2 (26-80)||(24366196-24366250)
chr2 (35-81)||(25358287-25358333)
chr2 (35-81)||(25370230-25370276)
chr2 (38-84)||(27745219-27745265)
chr2 (35-80)||(23139892-23139937)
chr2 (35-80)||(23551682-23551727)
chr2 (36-81)||(32140122-32140167)
chr2 (138-178)||(31603063-31603103)
[»] chr4 (40 HSPs)
chr4 (104-188)||(55268081-55268165)
chr4 (104-178)||(12634271-12634345)
chr4 (30-92)||(21276770-21276832)
chr4 (104-188)||(4743091-4743175)
chr4 (27-87)||(15048141-15048201)
chr4 (27-87)||(15106223-15106283)
chr4 (104-188)||(24493252-24493336)
chr4 (35-92)||(17464992-17465049)
chr4 (104-188)||(17465147-17465231)
chr4 (104-188)||(26493053-26493137)
chr4 (104-163)||(21276930-21276989)
chr4 (114-178)||(8898740-8898804)
chr4 (104-188)||(11377251-11377335)
chr4 (35-81)||(12347523-12347569)
chr4 (116-178)||(15154624-15154686)
chr4 (19-108)||(26493219-26493308)
chr4 (26-81)||(7197364-7197419)
chr4 (104-159)||(17169095-17169150)
chr4 (104-159)||(17174655-17174710)
chr4 (40-87)||(36709600-36709646)
chr4 (35-81)||(3371768-3371814)
chr4 (35-81)||(3419206-3419252)
chr4 (35-81)||(6518521-6518567)
chr4 (26-80)||(9857350-9857404)
chr4 (35-81)||(9945090-9945136)
chr4 (35-81)||(10631517-10631563)
chr4 (26-80)||(12808074-12808128)
chr4 (39-81)||(13883359-13883401)
chr4 (35-81)||(14653378-14653424)
chr4 (35-81)||(14690727-14690773)
chr4 (35-81)||(16683510-16683556)
chr4 (35-81)||(18078829-18078875)
chr4 (35-80)||(5717537-5717582)
chr4 (35-80)||(18080848-18080893)
chr4 (115-156)||(53000287-53000328)
chr4 (35-79)||(3392093-3392137)
chr4 (25-81)||(10731280-10731336)
chr4 (25-81)||(10945049-10945105)
chr4 (35-87)||(17295524-17295575)
chr4 (35-79)||(36654250-36654294)
[»] chr5 (35 HSPs)
chr5 (41-106)||(42687542-42687607)
chr5 (104-188)||(19222220-19222304)
chr5 (19-92)||(20055252-20055325)
chr5 (112-178)||(26069494-26069561)
chr5 (104-161)||(23029291-23029348)
chr5 (104-177)||(23114566-23114639)
chr5 (26-81)||(20738496-20738551)
chr5 (26-81)||(22948713-22948768)
chr5 (35-81)||(7761007-7761053)
chr5 (35-81)||(15732091-15732137)
chr5 (35-81)||(15736310-15736356)
chr5 (35-81)||(18613180-18613226)
chr5 (35-81)||(20595222-20595268)
chr5 (35-81)||(20790115-20790161)
chr5 (35-81)||(20795896-20795942)
chr5 (35-81)||(20832364-20832410)
chr5 (35-81)||(21734509-21734555)
chr5 (35-81)||(21812152-21812198)
chr5 (35-81)||(23435475-23435521)
chr5 (35-81)||(23446842-23446888)
chr5 (35-81)||(23618368-23618414)
chr5 (35-81)||(23685000-23685046)
chr5 (35-81)||(23849765-23849811)
chr5 (35-81)||(23973102-23973148)
chr5 (26-80)||(24165395-24165449)
chr5 (35-81)||(24935621-24935667)
chr5 (35-81)||(24941313-24941359)
chr5 (35-81)||(26848421-26848467)
chr5 (26-80)||(34223012-34223066)
chr5 (35-81)||(34780459-34780505)
chr5 (35-81)||(41765679-41765725)
chr5 (36-81)||(12410677-12410722)
chr5 (112-169)||(26266671-26266728)
chr5 (143-188)||(42687384-42687429)
chr5 (37-81)||(23771076-23771120)
[»] chr6 (22 HSPs)
chr6 (115-170)||(31817629-31817684)
chr6 (26-81)||(23523836-23523891)
chr6 (26-81)||(25964058-25964113)
chr6 (26-81)||(25968705-25968760)
chr6 (35-81)||(13168526-13168572)
chr6 (104-160)||(17756829-17756885)
chr6 (26-81)||(5399371-5399426)
chr6 (26-81)||(18396388-18396443)
chr6 (26-81)||(20218364-20218419)
chr6 (26-81)||(22112389-22112444)
chr6 (35-81)||(4188292-4188338)
chr6 (35-81)||(8603651-8603697)
chr6 (35-81)||(15700333-15700379)
chr6 (35-81)||(17743654-17743700)
chr6 (35-81)||(19075237-19075283)
chr6 (35-81)||(22005916-22005962)
chr6 (35-81)||(25786255-25786301)
chr6 (26-80)||(26138804-26138858)
chr6 (26-84)||(30245344-30245402)
chr6 (35-80)||(4741136-4741181)
chr6 (35-80)||(20993661-20993706)
chr6 (39-83)||(28973997-28974041)
[»] chr3 (49 HSPs)
chr3 (19-103)||(13832967-13833058)
chr3 (104-177)||(27992195-27992268)
chr3 (112-178)||(8890726-8890792)
chr3 (112-178)||(11271633-11271699)
chr3 (110-188)||(16998861-16998939)
chr3 (48-106)||(16999029-16999087)
chr3 (26-81)||(20225122-20225177)
chr3 (112-158)||(12881594-12881640)
chr3 (112-170)||(31139226-31139284)
chr3 (35-84)||(14071603-14071652)
chr3 (115-175)||(6461691-6461751)
chr3 (119-170)||(4864093-4864144)
chr3 (116-163)||(9762346-9762393)
chr3 (26-81)||(11399023-11399078)
chr3 (26-81)||(11827301-11827356)
chr3 (26-81)||(17041863-17041918)
chr3 (26-81)||(22038987-22039042)
chr3 (26-81)||(43496342-43496397)
chr3 (26-80)||(1993594-1993648)
chr3 (35-81)||(2781396-2781442)
chr3 (35-81)||(3279988-3280034)
chr3 (35-81)||(3338639-3338685)
chr3 (35-81)||(4768906-4768952)
chr3 (35-81)||(4830203-4830249)
chr3 (35-81)||(6710194-6710240)
chr3 (35-81)||(6809815-6809861)
chr3 (35-81)||(6815637-6815683)
chr3 (35-81)||(9360373-9360419)
chr3 (35-81)||(12246954-12247000)
chr3 (35-81)||(13087671-13087717)
chr3 (35-81)||(13093856-13093902)
chr3 (35-81)||(13418539-13418585)
chr3 (35-81)||(15425060-15425106)
chr3 (35-81)||(15430006-15430052)
chr3 (35-81)||(15854357-15854403)
chr3 (35-81)||(16385347-16385393)
chr3 (35-81)||(17023404-17023450)
chr3 (35-81)||(22164612-22164658)
chr3 (35-81)||(22169916-22169962)
chr3 (35-81)||(24697007-24697053)
chr3 (35-81)||(25055170-25055216)
chr3 (35-81)||(25765725-25765771)
chr3 (35-81)||(41473073-41473119)
chr3 (35-81)||(43841956-43842002)
chr3 (35-81)||(53354694-53354740)
chr3 (35-80)||(4365997-4366042)
chr3 (35-80)||(4383526-4383571)
chr3 (35-80)||(13098461-13098506)
chr3 (115-163)||(20487933-20487981)
[»] scaffold0094 (1 HSPs)
scaffold0094 (35-81)||(1802-1848)
[»] scaffold0197 (1 HSPs)
scaffold0197 (26-82)||(8716-8772)
[»] scaffold0031 (1 HSPs)
scaffold0031 (26-81)||(77972-78027)
[»] scaffold1092 (1 HSPs)
scaffold1092 (35-81)||(1572-1618)
[»] scaffold1058 (1 HSPs)
scaffold1058 (35-81)||(2949-2995)
[»] scaffold0855 (1 HSPs)
scaffold0855 (104-162)||(3777-3835)
[»] scaffold0847 (1 HSPs)
scaffold0847 (104-162)||(3942-4000)
[»] scaffold0816 (1 HSPs)
scaffold0816 (35-81)||(1223-1269)
[»] scaffold0673 (1 HSPs)
scaffold0673 (35-81)||(3107-3153)
[»] scaffold0624 (1 HSPs)
scaffold0624 (35-81)||(4830-4876)
[»] scaffold0607 (1 HSPs)
scaffold0607 (35-81)||(9658-9704)
[»] scaffold0489 (1 HSPs)
scaffold0489 (35-81)||(821-867)
[»] scaffold0230 (2 HSPs)
scaffold0230 (35-81)||(8887-8933)
scaffold0230 (35-81)||(16413-16459)
[»] scaffold0215 (1 HSPs)
scaffold0215 (35-81)||(32-78)
[»] scaffold0146 (1 HSPs)
scaffold0146 (35-81)||(38219-38265)
[»] scaffold0111 (1 HSPs)
scaffold0111 (35-81)||(34937-34983)
[»] scaffold0075 (1 HSPs)
scaffold0075 (35-81)||(19585-19631)
[»] scaffold0071 (2 HSPs)
scaffold0071 (35-81)||(32186-32232)
scaffold0071 (35-81)||(37132-37178)
[»] scaffold0035 (2 HSPs)
scaffold0035 (35-81)||(14471-14517)
scaffold0035 (35-81)||(49919-49965)
[»] scaffold0029 (2 HSPs)
scaffold0029 (35-81)||(117904-117950)
scaffold0029 (35-81)||(124148-124194)
[»] scaffold0022 (1 HSPs)
scaffold0022 (35-81)||(33274-33320)
[»] scaffold0004 (1 HSPs)
scaffold0004 (35-81)||(369403-369449)
[»] scaffold0168 (1 HSPs)
scaffold0168 (35-84)||(8741-8790)


Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 11242584 - 11242803
Alignment:
Q  1 ttctatgcctttttacttagtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatcttttttgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11242584 ttctatgcctttttacttagtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatcttttttgtt 11242683  T
Q  101 taaatttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaaaatgattatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |    
T  11242684 taaatttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaaagtgattatgga 11242783  T
Q  201 aacacaccagatgaatagtt 220  Q
    ||||||||| ||||||||||    
T  11242784 aacacaccacatgaatagtt 11242803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 11281415 - 11281517
Alignment:
Q  1 ttctatgcctttttacttagtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatcttttttgtt 100  Q
    ||||||||||||||||||||||||| ||||||| |||||| |||||||||   ||||||||||||| ||||||||||||||| ||||||||| |||||||    
T  11281415 ttctatgcctttttacttagtagactttctagtcttgggaatgttggaat---ctaatgacttaattctattcaaaccaagtctagatatctattttgtt 11281511  T
Q  101 taaatt 106  Q
    ||||||    
T  11281512 taaatt 11281517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 11268789 - 11268680
Alignment:
Q  1 ttctatgcctttttacttagtagaccttctagtattgggattgttggaatagtc----taatgacttaatcctattcaaaccaagtttagatatcttttt 96  Q
    ||||||||||||||||||||||||| ||||||| |||||| |||||||||||||    |||||||||||| ||||||||||||||| ||||||||| | |    
T  11268789 ttctatgcctttttacttagtagactttctagtcttgggaatgttggaatagtctaattaatgacttaattctattcaaaccaagtctagatatctatgt 11268690  T
Q  97 tgtttaaatt 106  Q
    ||||||||||    
T  11268689 tgtttaaatt 11268680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 11268595 - 11268478
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactaca-caaaaaatgattatgaaaa 202  Q
    |||| ||||||| |||||||||||||||||||| || ||||||||||||| ||||||||| |||||| ||||||||||||  |||||||||||| | |||    
T  11268595 attttatcatcttaaatatcaaacgaatgaccggaaagtgaagtttgatagtggaacaaatgagattggacaagactacagaaaaaaatgattacggaaa 11268496  T
Q  203 cacaccagatgaatagtt 220  Q
    ||| ||| ||||| ||||    
T  11268495 caccccaaatgaacagtt 11268478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 104 - 196
Target Start/End: Original strand, 11281602 - 11281694
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaaaatgatta 196  Q
    |||| ||||||| |||||| |||||||||||||||| ||||||||||||| ||||||||| |||||| |||||||||| | ||||||||||||    
T  11281602 attttatcatcttaaatattaaacgaatgaccgaaaagtgaagtttgatactggaacaaatgagattggacaagactatagaaaaaatgatta 11281694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 6847787 - 6847702
Alignment:
Q  19 agtagaccttctagtattgggattgttggaatagtctaatgactta--atcctattcaaaccaagtttagatatcttttttgttta 102  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||  |||||||||||||||||| || |||||| |||||||||    
T  6847787 agtagacctcctagttttgggattgttggaatagtctaatgacttaatatcctattcaaaccaagtctatatatctattttgttta 6847702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 188
Target Start/End: Original strand, 1864610 - 1864694
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaa 188  Q
    |||| |||||||||||||||||||||| || |||||| |||||||||||||||||||||| || ||| |||||||| ||||||||    
T  1864610 atttcatcatctcaaatatcaaacgaaggatcgaaagatgaagtttgatattggaacaaatgaaattagacaagacgacacaaaa 1864694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 1941641 - 1941581
Alignment:
Q  27 ttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttaga 87  Q
    ||||||| ||||||||||||||||||| |||||||| ||| ||||||||||||||||||||    
T  1941641 ttctagtcttgggattgttggaatagtttaatgactgaattctattcaaaccaagtttaga 1941581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 177
Target Start/End: Original strand, 14925823 - 14925896
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaag 177  Q
    |||| |||||||||||||||||||||| || |||||| |||||||| ||||||||||||| || ||| ||||||    
T  14925823 atttcatcatctcaaatatcaaacgaaggatcgaaagatgaagtttaatattggaacaaatgatattagacaag 14925896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 177
Target Start/End: Original strand, 15349289 - 15349362
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaag 177  Q
    |||| |||||||||||||||||||||| || |||||| |||||||| ||||||||||||| || ||| ||||||    
T  15349289 atttcatcatctcaaatatcaaacgaaggatcgaaagatgaagtttaatattggaacaaatgatattagacaag 15349362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 115 - 178
Target Start/End: Complemental strand, 1941523 - 1941460
Alignment:
Q  115 tcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaaga 178  Q
    ||||||||||||||||  |||||||||||||||||||| || ||||||| |||||| |||||||    
T  1941523 tcaaatatcaaacgaagtaccgaaaggtgaagtttgattttagaacaaatgagattagacaaga 1941460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 9046420 - 9046484
Alignment:
Q  115 tcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagac 179  Q
    |||||||||||||||| |||||||| ||||||||||||||| ||| ||| || ||| ||||||||    
T  9046420 tcaaatatcaaacgaaggaccgaaaagtgaagtttgatattagaataaatgatattagacaagac 9046484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 188
Target Start/End: Complemental strand, 6847608 - 6847529
Alignment:
Q  109 atcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaa 188  Q
    ||||||||||||||||||| ||  || |||  | ||||||||||||||||||||| |||||| ||| |||| ||||||||    
T  6847608 atcatctcaaatatcaaacaaagtactgaacagagaagtttgatattggaacaaatgagattagactagacaacacaaaa 6847529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 6712380 - 6712334
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||    
T  6712380 ttgggattgttggatgagtctaatgacctaatcctattcaaaccaag 6712334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 8787232 - 8787178
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 80  Q
    ||||| |||||||||||||||||  ||||||||||| |||||||| |||||||||    
T  8787232 cttcttgtattgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 8787178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 15523336 - 15523394
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaa 162  Q
    |||| |||||| |||||||||| |||| || |||||| |||||||||||||||||||||    
T  15523336 atttcatcatcacaaatatcaagcgaaggatcgaaagatgaagtttgatattggaacaa 15523394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 15061402 - 15061451
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 84  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||||||    
T  15061402 ttgggattgttggataagtctaatgacataatcctaatcaaaccaagttt 15061451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 1751127 - 1751190
Alignment:
Q  19 agtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagt 82  Q
    |||||||||| |||| ||| ||||||||||   ||||||||||| |||||||||||| ||||||    
T  1751127 agtagaccttttagtcttgagattgttggatgggtctaatgactaaatcctattcaagccaagt 1751190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 3376460 - 3376405
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  3376460 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 3376405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 21005470 - 21005415
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  21005470 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 21005415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 538203 - 538157
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  538203 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 538157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 545077 - 545031
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  545077 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 545031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 679274 - 679216
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaa 162  Q
    |||| |||||| |||||||||| |||| || |||||| |||||||||||| ||||||||    
T  679274 atttcatcatcacaaatatcaagcgaaggatcgaaagatgaagtttgatactggaacaa 679216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 821389 - 821435
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  821389 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 821435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 826402 - 826448
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  826402 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 826448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 828413 - 828459
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  828413 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 828459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 4158618 - 4158572
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  4158618 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 4158572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 4466600 - 4466554
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  4466600 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 4466554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 5840819 - 5840865
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  5840819 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 5840865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 8713137 - 8713183
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  8713137 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 8713183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 8718641 - 8718687
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  8718641 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 8718687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 8780393 - 8780339
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 80  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  8780393 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 8780339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 9004766 - 9004812
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  9004766 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 9004812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 9009751 - 9009797
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  9009751 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 9009797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 9258569 - 9258523
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  9258569 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 9258523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 9311684 - 9311730
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  9311684 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 9311730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 12548251 - 12548205
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  12548251 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 12548205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 14229894 - 14229848
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  14229894 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 14229848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 15916236 - 15916190
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  15916236 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 15916190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 15924545 - 15924499
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  15924545 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 15924499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 16330828 - 16330782
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  16330828 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 16330782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 18389808 - 18389854
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  18389808 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 18389854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 19014585 - 19014539
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  19014585 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 19014539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 19364547 - 19364593
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  19364547 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 19364593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 23203939 - 23203985
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23203939 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 23203985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 23510066 - 23510112
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23510066 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 23510112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 33609867 - 33609921
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 80  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  33609867 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaa 33609921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 37100303 - 37100257
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  37100303 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 37100257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 39388877 - 39388931
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 80  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  39388877 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 39388931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 6531399 - 6531468
Alignment:
Q  19 agtagaccttcta-gtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttaga 87  Q
    |||| |||||||| || ||||||||||||||  |||||||||||| ||| |||||||| |||||| ||||    
T  6531399 agtataccttctatgtcttgggattgttggataagtctaatgactaaattctattcaagccaagtctaga 6531468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 15066491 - 15066536
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 80  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  15066491 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 15066536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 3e-26; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 9798431 - 9798347
Alignment:
Q  19 agtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatcttttttgtttaa 103  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| | ||||| ||||||||| ||||||||||    
T  9798431 agtagaccttctagtcttgggattgtcggaatagtctaatgacttaatcctattcagatcaagtctagatatctattttgtttaa 9798347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 13539657 - 13539591
Alignment:
Q  112 atctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaaga 178  Q
    |||||||||| |||||||| |||||||||||||||||| |||||| | |||| |||||| |||||||    
T  13539657 atctcaaataccaaacgaaagaccgaaaggtgaagtttaatattgaatcaaatgagattagacaaga 13539591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 13684817 - 13684883
Alignment:
Q  112 atctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaaga 178  Q
    |||||||||| |||||||| |||||||||||||||||| |||||| | |||| |||||| |||||||    
T  13684817 atctcaaataccaaacgaaagaccgaaaggtgaagtttaatattgaatcaaatgagattagacaaga 13684883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 31469600 - 31469554
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||    
T  31469600 ttgggattgttggatgagtctaatgacctaatcctattcaaaccaag 31469554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 188
Target Start/End: Complemental strand, 9798251 - 9798174
Alignment:
Q  112 atctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgag-attcgacaagactacacaaaa 188  Q
    ||||||||||||| | ||| || ||||| ||||||||||||||||||||||| ||| ||| |||| ||| ||||||||    
T  9798251 atctcaaatatcagaagaaggaacgaaatgtgaagtttgatattggaacaaatgagaattagacaggacaacacaaaa 9798174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 9317986 - 9318034
Alignment:
Q  33 tattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  9317986 tattgggattgttggataagtctaatgacataatcctaatcaaaccaag 9318034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 17315262 - 17315222
Alignment:
Q  116 caaatatcaaacgaatgaccgaaaggtgaagtttgatattg 156  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  17315262 caaatatcaaacgaaggactgaaaggtgaagtttgatattg 17315222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 17337173 - 17337133
Alignment:
Q  116 caaatatcaaacgaatgaccgaaaggtgaagtttgatattg 156  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  17337173 caaatatcaaacgaaggaccgaaatgtgaagtttgatattg 17337133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 21319566 - 21319621
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||| || |||||||| |||||  |||||||||||||||||||| ||||||||||    
T  21319566 cttcttgtcttgggattcttggacaagtctaatgacttaatcctaatcaaaccaag 21319621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 22285118 - 22285173
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  22285118 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 22285173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 1685806 - 1685852
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  1685806 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 1685852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 6570517 - 6570471
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  6570517 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 6570471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 14351590 - 14351544
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  14351590 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 14351544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 14878233 - 14878187
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  14878233 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 14878187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 17126987 - 17127033
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  17126987 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 17127033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 18264330 - 18264284
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  18264330 ttgggattgttggataagtctaatgacgtaatcctaatcaaaccaag 18264284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 18273343 - 18273297
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  18273343 ttgggattgttggataagtctaatgacgtaatcctaatcaaaccaag 18273297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 19997535 - 19997581
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  19997535 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 19997581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 20038417 - 20038371
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20038417 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 20038371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 20044072 - 20044026
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20044072 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 20044026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 21103574 - 21103528
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  21103574 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 21103528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 22370699 - 22370745
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  22370699 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 22370745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 23503277 - 23503331
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 80  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  23503277 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaa 23503331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 25751645 - 25751599
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25751645 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 25751599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 26854221 - 26854267
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  26854221 ttgggattgttggatgagtctaatgacctaatcctaatcaaaccaag 26854267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 29325452 - 29325498
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  29325452 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 29325498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 35996235 - 35996281
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  35996235 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 35996281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 43836216 - 43836170
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  43836216 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 43836170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 21105616 - 21105571
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 80  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  21105616 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 21105571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 27933242 - 27933291
Alignment:
Q  38 ggattgttggaatagtctaatgacttaatcctattcaaaccaagtttaga 87  Q
    ||||||||| |||| |||| ||| | ||||||||||||||||||||||||    
T  27933242 ggattgttgaaataatctattgattgaatcctattcaaaccaagtttaga 27933291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 29003784 - 29003829
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 80  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  29003784 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 29003829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 17337121 - 17337057
Alignment:
Q  112 atctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaa 176  Q
    ||||| ||||||||| ||| || ||||| |||||||||||||||| | |||| |||||| |||||    
T  17337121 atctctaatatcaaatgaaggaacgaaaagtgaagtttgatattgaatcaaatgagattagacaa 17337057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 18008279 - 18008335
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagt 82  Q
    ||||| || |||||||||||| |  ||||||||||| |||||||| |||||||||||    
T  18008279 cttcttgttttgggattgttgtataagtctaatgacctaatcctaatcaaaccaagt 18008335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 21939422 - 21939378
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaacca 79  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||    
T  21939422 ttgggattgttggataagtctaatgacataatcctaatcaaacca 21939378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 27318718 - 27318803
Alignment:
Q  19 agtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatcttttttgtttaaa 104  Q
    |||||||||| |||| || | |||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  27318718 agtagaccttttagtcttagaattgttggaacagtctaatgacttaatcctattcaaaccaagtttagatatatattttgtttaaa 27318803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 109 - 188
Target Start/End: Original strand, 2130260 - 2130339
Alignment:
Q  109 atcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaa 188  Q
    |||||||||||||||||||||| || |||||| |||||||||||||||||||||| || ||| |||||||| ||||||||    
T  2130260 atcatctcaaatatcaaacgaaggatcgaaagatgaagtttgatattggaacaaatgaaattagacaagacgacacaaaa 2130339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 16527433 - 16527352
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacaca 185  Q
    |||| ||||||||||||||||||||||||| |||||| ||||||||||| |||||||||| || ||| |||||||| |||||    
T  16527433 atttcatcatctcaaatatcaaacgaatgatcgaaagatgaagtttgattttggaacaaatgaaattagacaagacgacaca 16527352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 188
Target Start/End: Original strand, 15421406 - 15421490
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaa 188  Q
    |||| |||||||||||||| ||||||| || |||||| |||||||||||||||||||||| || ||| |||||||| ||||||||    
T  15421406 atttcatcatctcaaatatgaaacgaaggatcgaaagatgaagtttgatattggaacaaatgaaattagacaagacgacacaaaa 15421490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 194
Target Start/End: Complemental strand, 12726983 - 12726893
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaaaatgat 194  Q
    |||| ||||||||||| || |||| || ||||||||  |||||||||||||||||||||| |||||| ||||||||| ||||||| |||||    
T  12726983 atttcatcatctcaaacattaaacaaaggaccgaaaaatgaagtttgatattggaacaaatgagattggacaagactgcacaaaacatgat 12726893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 8236384 - 8236448
Alignment:
Q  19 agtagaccttctagtatt-gggattgttggaatagtctaatgacttaatcctattcaaaccaagt 82  Q
    |||||||||| |||| || ||||||||||||||||||||||||||||||| ||||||||||||||    
T  8236384 agtagaccttttagtctttgggattgttggaatagtctaatgacttaatcttattcaaaccaagt 8236448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 17735049 - 17734986
Alignment:
Q  19 agtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagt 82  Q
    ||||||| ||||||| || ||||||||| ||||||||||||||| |||||||||||||||||||    
T  17735049 agtagacgttctagtcttaggattgttgaaatagtctaatgactaaatcctattcaaaccaagt 17734986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 12727157 - 12727068
Alignment:
Q  19 agtagaccttctagtattgggattgtt--ggaatagtctaatgacttaatcctattcaaaccaagtttagatatcttttttgtttaaatt 106  Q
    |||| |||||||||| |||| ||| ||  |||||||||||||||||||||||||||||||  |||| ||||||||| ||||| |||||||    
T  12727157 agtaaaccttctagtcttggaattttttaggaatagtctaatgacttaatcctattcaaattaagtctagatatctattttggttaaatt 12727068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 170
Target Start/End: Original strand, 28553606 - 28553664
Alignment:
Q  112 atctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagatt 170  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| | |||| ||||||    
T  28553606 atctcaaatatcaaacgaaggaccgaaaggtgaagtttgatattgaatcaaatgagatt 28553664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 27318869 - 27318920
Alignment:
Q  137 aaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaa 188  Q
    ||||||||||||||||||||||||||| |||||| |||||||| ||||||||    
T  27318869 aaaggtgaagtttgatattggaacaaatgagattagacaagacaacacaaaa 27318920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 170
Target Start/End: Original strand, 12788932 - 12788987
Alignment:
Q  115 tcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagatt 170  Q
    |||||||||||||||| |||||| ||||||||||||||||||  ||||| ||||||    
T  12788932 tcaaatatcaaacgaaggaccgagaggtgaagtttgatattgatacaaatgagatt 12788987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 52755303 - 52755236
Alignment:
Q  18 tagtagac-cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 84  Q
    |||||||| ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||||||    
T  52755303 tagtagactcttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaagttt 52755236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 21924812 - 21924858
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||| ||  |||||||||||||||||||||||||||||||    
T  21924812 ttgggattgttagatgagtctaatgacttaatcctattcaaaccaag 21924858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 36850294 - 36850245
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 84  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||||||    
T  36850294 ttgggattgttggataagtctaatgacataatcctaatcaaaccaagttt 36850245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 28553553 - 28553593
Alignment:
Q  116 caaatatcaaacgaatgaccgaaaggtgaagtttgatattg 156  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  28553553 caaatatcaaacgaaggatcgaaaggtgaagtttgatattg 28553593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 25727092 - 25727147
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25727092 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 25727147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 25735500 - 25735555
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25735500 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 25735555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 2386379 - 2386425
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  2386379 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 2386425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 3985407 - 3985453
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  3985407 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 3985453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 3990686 - 3990732
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  3990686 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 3990732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 8649018 - 8649064
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  8649018 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 8649064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 13250887 - 13250933
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  13250887 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 13250933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 16485428 - 16485474
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  16485428 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 16485474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 19788229 - 19788171
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 84  Q
    ||||| || ||||||||||||||   |||||||||| |||||||| |||||||||||||    
T  19788229 cttcttgtcttgggattgttggatatgtctaatgacataatcctaatcaaaccaagttt 19788171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 27047589 - 27047635
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  27047589 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 27047635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 27911268 - 27911222
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  27911268 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 27911222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 38045486 - 38045532
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  38045486 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 38045532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 41802424 - 41802470
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  41802424 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 41802470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 46143480 - 46143434
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  46143480 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 46143434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 49379583 - 49379537
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  49379583 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 49379537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 17986709 - 17986758
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 84  Q
    ||||||||||||||  ||||||||||| |||||||| ||||| |||||||    
T  17986709 ttgggattgttggataagtctaatgacataatcctaatcaaatcaagttt 17986758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 37627606 - 37627667
Alignment:
Q  115 tcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaa 176  Q
    ||||||||||||||||  || || ||||||| |||||||||||| |||| |||||| |||||    
T  37627606 tcaaatatcaaacgaagtactgagaggtgaaatttgatattggatcaaatgagattagacaa 37627667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 39286570 - 39286525
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 80  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  39286570 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 39286525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 41461877 - 41461926
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 84  Q
    ||||| ||||||||  ||||||||||| |||||||| |||||||||||||    
T  41461877 ttgggtttgttggataagtctaatgacataatcctaatcaaaccaagttt 41461926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 21511888 - 21511815
Alignment:
Q  19 agtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatct 92  Q
    |||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  21511888 agtagaccatttagtcttgggattgttggaatagtctaatgacttaatcctattcaaaccaagtctaaatatct 21511815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 21511717 - 21511634
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaa 187  Q
    |||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||| || ||| ||||| || |||||||    
T  21511717 atttcatcatctcaaatatcaaacgaatgatcgaaagatgaagtttgatattggaacaaatgaaattagacaatacgacacaaa 21511634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 21516367 - 21516314
Alignment:
Q  19 agtagaccttctagtattgggattgttggaatagtctaatgacttaatcctatt 72  Q
    |||||||| | |||| ||||||||||||||||||||||||||||||||||||||    
T  21516367 agtagaccatttagtgttgggattgttggaatagtctaatgacttaatcctatt 21516314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 188
Target Start/End: Complemental strand, 21516196 - 21516112
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaa 188  Q
    |||| |||||||||||||||||||||| || |||||  |||||||||||||||||| ||| || ||| ||||| || ||||||||    
T  21516196 atttcatcatctcaaatatcaaacgaaggatcgaaaaatgaagtttgatattggaataaatgaaattagacaatacgacacaaaa 21516112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 188
Target Start/End: Complemental strand, 25592902 - 25592818
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaa 188  Q
    |||| |||||||| ||||||||||||| || |||||| ||||||||||||| |||||||| || ||| || ||||| ||||||||    
T  25592902 atttcatcatctccaatatcaaacgaaggatcgaaagatgaagtttgatatgggaacaaatgaaattagaaaagacgacacaaaa 25592818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 23482639 - 23482702
Alignment:
Q  19 agtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagt 82  Q
    ||||||| ||||| | |||||||||| ||||||||||||||||| ||| |||||||||||||||    
T  23482639 agtagactttctactcttgggattgtgggaatagtctaatgactaaattctattcaaaccaagt 23482702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 24371220 - 24371162
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaa 162  Q
    |||| |||||| |||||||||| |||| || |||||| |||||||||||||||||||||    
T  24371220 atttcatcatcacaaatatcaagcgaaggatcgaaagatgaagtttgatattggaacaa 24371162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 35406740 - 35406802
Alignment:
Q  115 tcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaag 177  Q
    |||||||||||||||| ||||||||| |||||||||||||| || || | |||||| ||||||    
T  35406740 tcaaatatcaaacgaaggaccgaaagatgaagtttgatattagagcagatgagattagacaag 35406802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 36684447 - 36684496
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 84  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||||||    
T  36684447 ttgggattgttggataagtctaatgacataatcctaatcaaaccaagttt 36684496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 23340708 - 23340763
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23340708 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 23340763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 24507446 - 24507501
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  24507446 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 24507501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 28496641 - 28496586
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  28496641 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 28496586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 20172754 - 20172708
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20172754 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 20172708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 20282197 - 20282243
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20282197 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 20282243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 21468386 - 21468340
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  21468386 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 21468340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 23698754 - 23698700
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 80  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  23698754 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 23698700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 24366250 - 24366196
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 80  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  24366250 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 24366196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 25358287 - 25358333
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25358287 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 25358333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 25370276 - 25370230
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25370276 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 25370230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 27745219 - 27745265
Alignment:
Q  38 ggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 84  Q
    |||||||||||  ||||||||||| |||||||| |||||||||||||    
T  27745219 ggattgttggataagtctaatgacataatcctaatcaaaccaagttt 27745265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 23139937 - 23139892
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 80  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  23139937 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 23139892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 23551727 - 23551682
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 80  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  23551727 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 23551682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 32140122 - 32140167
Alignment:
Q  36 tgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    |||||||||||||  ||||||||||| |||||||| ||||||||||    
T  32140122 tgggattgttggagaagtctaatgacataatcctaatcaaaccaag 32140167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 31603103 - 31603063
Alignment:
Q  138 aaggtgaagtttgatattggaacaaacgagattcgacaaga 178  Q
    ||||||||||||||||||||| |||| |||||| |||||||    
T  31603103 aaggtgaagtttgatattggatcaaatgagattagacaaga 31603063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 188
Target Start/End: Original strand, 55268081 - 55268165
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaa 188  Q
    |||| |||||||||||||||||||||| || |||||| |||||||||||||||||||||| || ||| |||||||| ||||||||    
T  55268081 atttcatcatctcaaatatcaaacgaaggatcgaaagatgaagtttgatattggaacaaatgaaattagacaagacgacacaaaa 55268165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 104 - 178
Target Start/End: Complemental strand, 12634345 - 12634271
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaaga 178  Q
    |||| |||||||||||||||||| |||||||||||| ||||||||||||||| ||||||| |||||| |||||||    
T  12634345 atttcatcatctcaaatatcaaatgaatgaccgaaatgtgaagtttgatattagaacaaatgagattagacaaga 12634271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 92
Target Start/End: Original strand, 21276770 - 21276832
Alignment:
Q  30 tagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatct 92  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  21276770 tagtcttgggattgttggaatagtctaatgacttaatcctattcaaaccaagtctaaatatct 21276832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 188
Target Start/End: Original strand, 4743091 - 4743175
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaa 188  Q
    |||| |||||||||||||||||||||| || | |||| |||||||||||||||||||||| || ||| |||||||| ||||||||    
T  4743091 atttcatcatctcaaatatcaaacgaaggatcaaaagatgaagtttgatattggaacaaatgaaattagacaagacgacacaaaa 4743175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 15048201 - 15048141
Alignment:
Q  27 ttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttaga 87  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  15048201 ttctagtcttgggattgttggaatagtctaatgactaaatcctattcaaaccaagtctaga 15048141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 15106223 - 15106283
Alignment:
Q  27 ttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttaga 87  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  15106223 ttctagtcttgggattgttggaatagtctaatgactaaatcctattcaaaccaagtctaga 15106283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 188
Target Start/End: Original strand, 24493252 - 24493336
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaa 188  Q
    |||| |||||||||||||||||||||| ||  ||||| |||||||||||||||||||||| || ||| |||||||| ||||||||    
T  24493252 atttcatcatctcaaatatcaaacgaaggattgaaagatgaagtttgatattggaacaaatgaaattagacaagacgacacaaaa 24493336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 17464992 - 17465049
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatct 92  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||    
T  17464992 ttgggattgttggaatagtctaatgacttaatcttattcaaaccaagtctaaatatct 17465049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 188
Target Start/End: Original strand, 17465147 - 17465231
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaa 188  Q
    |||| |||||||||||||||||| ||| ||  ||||| |||||||||||||||||| ||| || ||| |||||||| ||||||||    
T  17465147 atttcatcatctcaaatatcaaatgaaggattgaaagatgaagtttgatattggaataaatgaaattagacaagacgacacaaaa 17465231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 188
Target Start/End: Complemental strand, 26493137 - 26493053
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaa 188  Q
    |||| ||||||||||||||||| |||  || |||||| ||||||||||||||| |||||| | |||| |||||||| ||||||||    
T  26493137 atttcatcatctcaaatatcaaccgatggatcgaaagatgaagtttgatattgaaacaaatgtgattagacaagacaacacaaaa 26493053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 21276930 - 21276989
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaa 163  Q
    |||| |||||||||||||||||||||| || |||||  ||||||||||||||||||||||    
T  21276930 atttcatcatctcaaatatcaaacgaaggatcgaaaaatgaagtttgatattggaacaaa 21276989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 8898740 - 8898804
Alignment:
Q  114 ctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaaga 178  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||  ||| |||||| |||||||    
T  8898740 ctcaaatatcaaacgaataagcgagaggtgaagtttgatattggattaaatgagattagacaaga 8898804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 188
Target Start/End: Complemental strand, 11377335 - 11377251
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaa 188  Q
    |||| ||||||| |||||||||||||  || |||||| |||| |||||| |||||||||| | |||| |||||||| ||||||||    
T  11377335 atttcatcatctgaaatatcaaacgatggatcgaaagatgaattttgatgttggaacaaatgtgattagacaagacaacacaaaa 11377251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 12347523 - 12347569
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||    
T  12347523 ttgggattgttggatgagtctaatgacctaatcctattcaaaccaag 12347569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 15154624 - 15154686
Alignment:
Q  116 caaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaaga 178  Q
    ||||||||||| ||  |||||||| |||||||||||||||||| |||| |||||| |||||||    
T  15154624 caaatatcaaatgagagaccgaaatgtgaagtttgatattggagcaaatgagattagacaaga 15154686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 26493308 - 26493219
Alignment:
Q  19 agtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatcttttttgtttaaatttg 108  Q
    |||||| |||||||| |||||||| |||||  ||||||| |||| |||||||||||| |||||| ||||  | | |||| ||||||||||    
T  26493308 agtagatcttctagtcttgggattattggatgagtctaaggactaaatcctattcaagccaagtctagaactttgttttatttaaatttg 26493219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 7197364 - 7197419
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||| || ||||||||||||||  | |||||||||||||||||| ||||||||||    
T  7197364 cttcttgtcttgggattgttggataattctaatgacttaatcctaatcaaaccaag 7197419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 159
Target Start/End: Original strand, 17169095 - 17169150
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaa 159  Q
    |||| |||||| |||||||||| |||| || |||||| ||||||||||||||||||    
T  17169095 atttcatcatcacaaatatcaagcgaaggatcgaaagatgaagtttgatattggaa 17169150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 159
Target Start/End: Original strand, 17174655 - 17174710
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaa 159  Q
    |||| |||||| |||||||||| |||| || |||||| ||||||||||||||||||    
T  17174655 atttcatcatcacaaatatcaagcgaaggatcgaaagatgaagtttgatattggaa 17174710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 36709646 - 36709600
Alignment:
Q  40 attgttggaatagtctaatgacttaatcctattcaaaccaagtttaga 87  Q
    ||||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  36709646 attgttggaat-gtctaatgactaaatcctattcaaaccaagtctaga 36709600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 3371768 - 3371814
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  3371768 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 3371814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 3419206 - 3419252
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  3419206 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 3419252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 6518521 - 6518567
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  6518521 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 6518567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 9857350 - 9857404
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 80  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  9857350 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaa 9857404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 9945090 - 9945136
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  9945090 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 9945136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 10631517 - 10631563
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  10631517 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 10631563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 12808128 - 12808074
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 80  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  12808128 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 12808074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 13883401 - 13883359
Alignment:
Q  39 gattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||  ||||||||||| |||||||||||||||||||    
T  13883401 gattgttggatgagtctaatgacctaatcctattcaaaccaag 13883359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 14653424 - 14653378
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  14653424 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 14653378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 14690773 - 14690727
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  14690773 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 14690727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 16683510 - 16683556
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  16683510 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 16683556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 18078829 - 18078875
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  18078829 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 18078875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 5717537 - 5717582
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 80  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  5717537 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 5717582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 18080893 - 18080848
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 80  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  18080893 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 18080848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 156
Target Start/End: Complemental strand, 53000328 - 53000287
Alignment:
Q  115 tcaaatatcaaacgaatgaccgaaaggtgaagtttgatattg 156  Q
    ||||||||||||||||| || |||||||||||| ||||||||    
T  53000328 tcaaatatcaaacgaattactgaaaggtgaagtatgatattg 53000287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 3392093 - 3392137
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaacca 79  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||    
T  3392093 ttgggattgttggataagtctaatgacataatcctaatcaaacca 3392137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 10731280 - 10731336
Alignment:
Q  25 ccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    |||||| || ||||||||||||||  ||||||||||| |||||||| ||||| ||||    
T  10731280 ccttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaatcaag 10731336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 10945049 - 10945105
Alignment:
Q  25 ccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    |||||| || ||||||||||||||  ||||||||||| |||||||| ||||| ||||    
T  10945049 ccttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaatcaag 10945105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 17295575 - 17295524
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttaga 87  Q
    |||||||||||||||  ||||||||||| ||||||||||||| ||||| ||||    
T  17295575 ttgggattgttggaag-gtctaatgactaaatcctattcaaatcaagtctaga 17295524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 36654294 - 36654250
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaacca 79  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||    
T  36654294 ttgggattgttggataagtctaatgacataatcctaatcaaacca 36654250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 42687607 - 42687542
Alignment:
Q  41 ttgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatcttttttgtttaaatt 106  Q
    |||||||||||||||||||| | ||||||||||||||||||| ||||||||| |||| ||||||||    
T  42687607 ttgttggaatagtctaatgattaaatcctattcaaaccaagtctagatatctattttatttaaatt 42687542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 188
Target Start/End: Original strand, 19222220 - 19222304
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaa 188  Q
    |||| |||||||||||||||||||||| || || ||| |||||||||||||||||||||| || ||| |||||||| || |||||    
T  19222220 atttcatcatctcaaatatcaaacgaaggatcggaagatgaagtttgatattggaacaaatgaaattagacaagacgacgcaaaa 19222304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 20055252 - 20055325
Alignment:
Q  19 agtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatct 92  Q
    |||||||||| ||||  ||| ||||||| |||||||||||| |||||||||||||||||||||| || ||||||    
T  20055252 agtagaccttttagtcatggaattgttgaaatagtctaatggcttaatcctattcaaaccaagtataaatatct 20055325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 26069561 - 26069494
Alignment:
Q  112 atctcaaatatcaaacgaatgaccgaaaggt-gaagtttgatattggaacaaacgagattcgacaaga 178  Q
    |||||||||||||||||||||| |||||||| |||||| ||||||||| |||| |||||| |||||||    
T  26069561 atctcaaatatcaaacgaatgatcgaaaggtggaagttcgatattggatcaaatgagattagacaaga 26069494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 23029348 - 23029291
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaaca 161  Q
    |||| |||||| |||||||||| |||| || |||||| ||||||||||||||||||||    
T  23029348 atttcatcatcacaaatatcaagcgaaggatcgaaagatgaagtttgatattggaaca 23029291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 177
Target Start/End: Original strand, 23114566 - 23114639
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaag 177  Q
    |||| ||||||||||||||||| |||||||  ||| | |||||||| ||||||||||||| || ||| ||||||    
T  23114566 atttcatcatctcaaatatcaagcgaatgatagaatgatgaagtttaatattggaacaaatgaaattagacaag 23114639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 20738496 - 20738551
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20738496 cttcttgtcttgggattgttggatgagtctaatgacctaatcctaatcaaaccaag 20738551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 22948713 - 22948768
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||| || |||||||||| |||  ||||||||||| |||||||||||||||||||    
T  22948713 cttcttgtcttgggattgtcggataagtctaatgacataatcctattcaaaccaag 22948768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 7761053 - 7761007
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  7761053 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 7761007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 15732091 - 15732137
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  15732091 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 15732137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 15736310 - 15736356
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  15736310 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 15736356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 18613226 - 18613180
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  18613226 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 18613180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 20595268 - 20595222
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20595268 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 20595222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 20790161 - 20790115
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20790161 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 20790115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 20795942 - 20795896
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20795942 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 20795896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 20832410 - 20832364
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20832410 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 20832364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 21734555 - 21734509
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  21734555 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 21734509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 21812198 - 21812152
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  21812198 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 21812152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 23435475 - 23435521
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23435475 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 23435521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 23446842 - 23446888
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23446842 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 23446888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 23618414 - 23618368
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23618414 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 23618368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 23685000 - 23685046
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23685000 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 23685046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 23849811 - 23849765
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23849811 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 23849765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 23973148 - 23973102
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23973148 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 23973102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 24165395 - 24165449
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 80  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  24165395 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 24165449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 24935621 - 24935667
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  24935621 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 24935667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 24941313 - 24941359
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  24941313 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 24941359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 26848421 - 26848467
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  26848421 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 26848467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 34223066 - 34223012
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 80  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  34223066 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 34223012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 34780459 - 34780505
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  34780459 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 34780505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 41765725 - 41765679
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  41765725 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 41765679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 12410677 - 12410722
Alignment:
Q  36 tgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    |||||||||||||  ||||||||||| |||||||| ||||||||||    
T  12410677 tgggattgttggatgagtctaatgacctaatcctaatcaaaccaag 12410722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 26266671 - 26266728
Alignment:
Q  112 atctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagat 169  Q
    ||||||||||||||| ||| ||| |||| |||| ||||||||||||| |||| |||||    
T  26266671 atctcaaatatcaaatgaaggactgaaatgtgaggtttgatattggatcaaatgagat 26266728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 42687429 - 42687384
Alignment:
Q  143 gaagtttgatattggaacaaacgagattcgacaagactacacaaaa 188  Q
    ||||||||||||||||||||| |||||| || ||||| ||||||||    
T  42687429 gaagtttgatattggaacaaatgagattagataagacaacacaaaa 42687384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 23771076 - 23771120
Alignment:
Q  37 gggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23771076 gggattgttggataagtctaatgacataatcctaatcaaaccaag 23771120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 4e-16; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 115 - 170
Target Start/End: Complemental strand, 31817684 - 31817629
Alignment:
Q  115 tcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagatt 170  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||    
T  31817684 tcaaatatcaaacgaaggaccgaaaggtgaagtttgatattagaacaaatgagatt 31817629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 23523891 - 23523836
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||| || ||||||||||||||  |||||||||||||||||||| ||||||||||    
T  23523891 cttcttgttttgggattgttggatgagtctaatgacttaatcctaatcaaaccaag 23523836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 25964058 - 25964113
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||| |||||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25964058 cttcttgtattgggattgttggataagtctaatgacataatcctaatcaaaccaag 25964113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 25968705 - 25968760
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||| |||||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25968705 cttcttgtattgggattgttggataagtctaatgacataatcctaatcaaaccaag 25968760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 13168526 - 13168572
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||    
T  13168526 ttgggattgttggatgagtctaatgacctaatcctattcaaaccaag 13168572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 160
Target Start/End: Original strand, 17756829 - 17756885
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaac 160  Q
    |||| |||||||||||||||||||||| || | |||| ||||||| |||||||||||    
T  17756829 atttcatcatctcaaatatcaaacgaaggatcaaaagatgaagttagatattggaac 17756885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 5399371 - 5399426
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  5399371 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaag 5399426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 18396443 - 18396388
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||| || ||||||||||||||  |||||||||| ||||||||| ||||||||||    
T  18396443 cttcttgtcttgggattgttggacaagtctaatgatttaatcctaatcaaaccaag 18396388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 20218419 - 20218364
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20218419 cttcttgtcttgggattgttggatgagtctaatgacataatcctaatcaaaccaag 20218364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 22112444 - 22112389
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  22112444 cttcttgtcttgggattgttggatgagtctaatgacataatcctaatcaaaccaag 22112389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 4188292 - 4188338
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  4188292 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 4188338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 8603651 - 8603697
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  8603651 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 8603697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 15700333 - 15700379
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  15700333 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 15700379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 17743654 - 17743700
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  17743654 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 17743700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 19075283 - 19075237
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  19075283 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 19075237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 22005916 - 22005962
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  22005916 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 22005962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 25786301 - 25786255
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25786301 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 25786255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 26138804 - 26138858
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 80  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  26138804 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 26138858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 30245344 - 30245402
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 84  Q
    ||||| || ||||||||||||||  ||||||||||| ||||| || |||||||||||||    
T  30245344 cttcttgtcttgggattgttggataagtctaatgacataatcatagtcaaaccaagttt 30245402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 4741136 - 4741181
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 80  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  4741136 ttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 4741181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 20993706 - 20993661
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 80  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  20993706 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 20993661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 28973997 - 28974041
Alignment:
Q  39 gattgttggaatagtctaatgacttaatcctattcaaaccaagtt 83  Q
    ||||||||||||| |||||||||| ||||||| |||| |||||||    
T  28973997 gattgttggaataatctaatgactcaatcctaatcaacccaagtt 28974041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 13833058 - 13832967
Alignment:
Q  19 agtagaccttctagtattgggattgttggaatagtctaat-------gacttaatcctattcaaaccaagtttagatatcttttttgtttaa 103  Q
    |||||||||| |||| ||| ||||||||||||||||||||       |||||||||||||||||||||||| || |||||| ||||||||||    
T  13833058 agtagaccttttagttttgtgattgttggaatagtctaatctctaatgacttaatcctattcaaaccaagtctaaatatctattttgtttaa 13832967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 27992268 - 27992195
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaag 177  Q
    |||| ||||||||||||||||| |||| || |||||| |||||||||||||||||||||| || ||| ||||||    
T  27992268 atttcatcatctcaaatatcaagcgaaagatcgaaagatgaagtttgatattggaacaaatgaaattagacaag 27992195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 8890726 - 8890792
Alignment:
Q  112 atctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaaga 178  Q
    |||||||||||||||||||  ||||| | |||||||||||||||||||||||  ||||| |||||||    
T  8890726 atctcaaatatcaaacgaagaaccgagaagtgaagtttgatattggaacaaattagattagacaaga 8890792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 11271633 - 11271699
Alignment:
Q  112 atctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaaga 178  Q
    ||||||||||||||| ||| || |||||| ||||||||||||||||| |||| |||||| |||||||    
T  11271633 atctcaaatatcaaatgaaggatcgaaagatgaagtttgatattggatcaaatgagattagacaaga 11271699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 188
Target Start/End: Complemental strand, 16998939 - 16998861
Alignment:
Q  110 tcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaa 188  Q
    |||||||||||||||||||||  |  ||| || ||||||||||||||||||||| ||| || |||||||| ||||||||    
T  16998939 tcatctcaaatatcaaacgaagtaatgaacggagaagtttgatattggaacaaaagaggttagacaagacaacacaaaa 16998861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 16999087 - 16999029
Alignment:
Q  48 aatagtctaatgacttaatcctattcaaaccaagtttagatatcttttttgtttaaatt 106  Q
    ||||||||||||||| ||||||||||||||||||| |||||| || |||| ||||||||    
T  16999087 aatagtctaatgactgaatcctattcaaaccaagtatagatacctattttatttaaatt 16999029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 20225177 - 20225122
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||| || ||||||||||||||  |||||||||||||||||||| ||||||||||    
T  20225177 cttcttgtcttgggattgttggacaagtctaatgacttaatcctaatcaaaccaag 20225122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 12881594 - 12881640
Alignment:
Q  112 atctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattgga 158  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||||    
T  12881594 atctcaaatatcaaacgaagaaccgagaggtgaagtttgatattgga 12881640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 170
Target Start/End: Complemental strand, 31139284 - 31139226
Alignment:
Q  112 atctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagatt 170  Q
    |||||| ||||||||||||  ||||| |||||||||||||||||||| |||| ||||||    
T  31139284 atctcatatatcaaacgaagaaccgagaggtgaagtttgatattggatcaaatgagatt 31139226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 14071652 - 14071603
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 84  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||||||    
T  14071652 ttgggattgttggataagtctaatgacataatcctaatcaaaccaagttt 14071603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 6461691 - 6461751
Alignment:
Q  115 tcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgaca 175  Q
    ||||||||||| ||||  |||||||||||||| |||||||| ||||||| |||||| ||||    
T  6461691 tcaaatatcaatcgaagtaccgaaaggtgaagattgatattagaacaaatgagattggaca 6461751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 170
Target Start/End: Original strand, 4864093 - 4864144
Alignment:
Q  119 atatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagatt 170  Q
    |||||||||||| |||||| ||||||| ||||||||||||| ||| ||||||    
T  4864093 atatcaaacgaaggaccgagaggtgaaatttgatattggaataaatgagatt 4864144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 163
Target Start/End: Complemental strand, 9762393 - 9762346
Alignment:
Q  116 caaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaa 163  Q
    |||||||||| ||||||| |||||| |||| |||||||||||||||||    
T  9762393 caaatatcaagcgaatgatcgaaagatgaaatttgatattggaacaaa 9762346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 11399023 - 11399078
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  11399023 cttcttgtgttgggattgttggataagtctaatgacataatcctaatcaaaccaag 11399078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 11827356 - 11827301
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  11827356 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaag 11827301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 17041863 - 17041918
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  17041863 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 17041918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 22038987 - 22039042
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  22038987 cttcttgtcttgggattgttggataagtctaatgacctaatcctaatcaaaccaag 22039042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 43496342 - 43496397
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  43496342 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 43496397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 1993594 - 1993648
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 80  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  1993594 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 1993648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 2781396 - 2781442
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  2781396 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 2781442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 3279988 - 3280034
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  3279988 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 3280034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 3338685 - 3338639
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  3338685 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 3338639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 4768952 - 4768906
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  4768952 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 4768906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 4830203 - 4830249
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  4830203 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 4830249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 6710194 - 6710240
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  6710194 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 6710240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 6809815 - 6809861
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  6809815 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 6809861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 6815637 - 6815683
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  6815637 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 6815683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 9360419 - 9360373
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  9360419 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 9360373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 12246954 - 12247000
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  12246954 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 12247000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 13087671 - 13087717
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  13087671 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 13087717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 13093902 - 13093856
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  13093902 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 13093856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 13418539 - 13418585
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  13418539 ttgggattgttggatgagtctaatgacctaatcctaatcaaaccaag 13418585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 15425106 - 15425060
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  15425106 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 15425060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 15430006 - 15430052
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  15430006 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 15430052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 15854357 - 15854403
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  15854357 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 15854403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 16385393 - 16385347
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  16385393 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 16385347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 17023404 - 17023450
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  17023404 ttgggattgttggataagtctaatgacctaatcctaatcaaaccaag 17023450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 22164658 - 22164612
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  22164658 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 22164612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 22169962 - 22169916
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  22169962 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 22169916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 24697007 - 24697053
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  24697007 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 24697053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 25055170 - 25055216
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25055170 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 25055216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 25765771 - 25765725
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25765771 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 25765725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 41473073 - 41473119
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  41473073 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 41473119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 43842002 - 43841956
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  43842002 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 43841956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 53354740 - 53354694
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  53354740 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 53354694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 4365997 - 4366042
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 80  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  4365997 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 4366042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 4383526 - 4383571
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 80  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  4383526 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 4383571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 13098461 - 13098506
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 80  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  13098461 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 13098506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 20487981 - 20487933
Alignment:
Q  115 tcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaa 163  Q
    ||||||||||||| ||  ||||| |||||||||||||||||||| ||||    
T  20487981 tcaaatatcaaacaaagtaccgagaggtgaagtttgatattggatcaaa 20487933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 1802 - 1848
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||    
T  1802 ttgggattgttggatgagtctaatgacctaatcctattcaaaccaag 1848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 8772 - 8716
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagt 82  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||||    
T  8772 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaagt 8716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 77972 - 78027
Alignment:
Q  26 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  77972 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 78027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1092 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1092
Description:

Target: scaffold1092; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 1618 - 1572
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  1618 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 1572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1058 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1058
Description:

Target: scaffold1058; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 2995 - 2949
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  2995 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 2949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0855 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 3777 - 3835
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaa 162  Q
    |||| |||||| ||||||||||  ||| || |||||| |||||||||||||||||||||    
T  3777 atttcatcatcacaaatatcaagagaaggatcgaaagatgaagtttgatattggaacaa 3835  T

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Target: scaffold0847 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 3942 - 4000
Alignment:
Q  104 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaa 162  Q
    |||| |||||| ||||||||||  ||| || |||||| |||||||||||||||||||||    
T  3942 atttcatcatcacaaatatcaagagaaggatcgaaagatgaagtttgatattggaacaa 4000  T

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Target: scaffold0816 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0816
Description:

Target: scaffold0816; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 1269 - 1223
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  1269 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 1223  T

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Target: scaffold0673 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 3153 - 3107
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  3153 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 3107  T

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Target: scaffold0624 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0624
Description:

Target: scaffold0624; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 4830 - 4876
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  4830 ttgggattgttggataagtctaatgacgtaatcctaatcaaaccaag 4876  T

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Target: scaffold0607 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 9658 - 9704
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  9658 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 9704  T

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Target: scaffold0489 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0489
Description:

Target: scaffold0489; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 821 - 867
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  821 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 867  T

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Target: scaffold0230 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 8887 - 8933
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  8887 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 8933  T

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Target: scaffold0230; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 16413 - 16459
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  16413 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 16459  T

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Target: scaffold0215 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 78 - 32
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  78 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 32  T

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Target: scaffold0146 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 38219 - 38265
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  38219 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 38265  T

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Target: scaffold0111 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 34983 - 34937
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  34983 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 34937  T

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Target: scaffold0075 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 19585 - 19631
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  19585 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 19631  T

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Target: scaffold0071 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 32232 - 32186
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  32232 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 32186  T

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Target: scaffold0071; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 37132 - 37178
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  37132 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 37178  T

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Target: scaffold0035 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 14517 - 14471
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  14517 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 14471  T

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Target: scaffold0035; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 49965 - 49919
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  49965 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 49919  T

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Target: scaffold0029 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 117904 - 117950
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  117904 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 117950  T

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Target: scaffold0029; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 124148 - 124194
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  124148 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 124194  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 33320 - 33274
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  33320 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 33274  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 369449 - 369403
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 81  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  369449 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 369403  T

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Target: scaffold0168 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 8790 - 8741
Alignment:
Q  35 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 84  Q
    ||||||||||| ||  ||||||||||| |||||||| |||||||||||||    
T  8790 ttgggattgtttgataagtctaatgacataatcctaatcaaaccaagttt 8741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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