View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1698-Insertion-3 (Length: 318)
Name: NF1698-Insertion-3
Description: NF1698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1698-Insertion-3 |
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Alignment Details
Target: chr4 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 7 - 312
Target Start/End: Complemental strand, 54416128 - 54415823
Alignment:
| Q |
7 |
aaaatttgatgttaatcactcgaaaattaccgctggatgtgtggaaggggagtagggagcctgtgtttaccttatatagcttataagcccacagccaata |
106 |
Q |
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| T |
54416128 |
aaaatttgatgttaatcactcgtaaattaccgctggatgtgtggaaggggagtagggagcctgtgtttaccttatatagcttataagcccacagccaata |
54416029 |
T |
|
| Q |
107 |
acaattcataactaactgactggagttagcagctgtattgtcaatacagtattgacaggagcactggatgtgctaggagaacagtttcccttcccctatc |
206 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
54416028 |
acaattcataactaactgactggagttggcagctgtattgtcaatacagtattgacaggagcactggatgtgcaaggagaacagtttcccttcccctatc |
54415929 |
T |
|
| Q |
207 |
ccccaccactaggagactcctccattaaatatgcagggtagtcataagccttactcaaacagaatgataaatcattagcttatccaacacttgagataat |
306 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
54415928 |
ccccaccactaggagactcctccattaaatatgcagggtagtcataagccttactcaaacagaatgataaatcattagcttatccaacactagagataat |
54415829 |
T |
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| Q |
307 |
ttcaca |
312 |
Q |
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|||||| |
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| T |
54415828 |
ttcaca |
54415823 |
T |
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