View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16981_low_1 (Length: 769)
Name: NF16981_low_1
Description: NF16981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16981_low_1 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 723; Significance: 0; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 723; E-Value: 0
Query Start/End: Original strand, 19 - 753
Target Start/End: Complemental strand, 23597392 - 23596658
Alignment:
| Q |
19 |
acagtgatctgaggaacaccccttggagcaggaggaatacccgacaactcaaacttgcccaacaaattgttatcacgagtccttgttctttctccttcgt |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23597392 |
acagtgatctgaggaacaccccttggagcaggaggaatacccgacagctcaaacttgcccaacaaattgttatcacgagtccttgttctttctccttcgt |
23597293 |
T |
|
| Q |
119 |
agacctgaatcagcacaccaggttggttatcagaataggtcgaaaacacctgctccttcttggtaggaattgttgtgtttctcggaattaacacagtcat |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23597292 |
agacctgaatcagcacaccaggttggttatcagaataggtcgaaaacacctgctccttcttggtaggaattgttgtgtttctcggaattaacacagtcat |
23597193 |
T |
|
| Q |
219 |
gactcctcctgcagtctccaaaccaagggaaagatgagtaacatccagcaacaaaagatcctgtactttctcattgccttcgccgctcaaaatagcagct |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23597192 |
gactcctcctgcagtctccaaaccaagggaaagaggagtaacatccagcaacaaaagatcctgtactttctcattgccttcgccgctcaaaatagcagct |
23597093 |
T |
|
| Q |
319 |
tggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaa |
418 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23597092 |
tggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaa |
23596993 |
T |
|
| Q |
419 |
tcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaa |
518 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23596992 |
tcctagtcgatccgccaacaagaacaacatcatcaacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaa |
23596893 |
T |
|
| Q |
519 |
tagatccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagta |
618 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23596892 |
tagatccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagta |
23596793 |
T |
|
| Q |
619 |
gaggaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattctt |
718 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23596792 |
gaggaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattctt |
23596693 |
T |
|
| Q |
719 |
gaacaaaatggttcaccatcctgttatcaaaatct |
753 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
23596692 |
gaacaaaatggttcaccatcctgttatcaaaatct |
23596658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 571; E-Value: 0
Query Start/End: Original strand, 19 - 753
Target Start/End: Complemental strand, 23588540 - 23587806
Alignment:
| Q |
19 |
acagtgatctgaggaacaccccttggagcaggaggaatacccgacaactcaaacttgcccaacaaattgttatcacgagtccttgttctttctccttcgt |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |
|
|
| T |
23588540 |
acagtgatctgaggaacaccccttggagcaggagggatacccgacaactcaaacttgcccaacaaattgttatcacgagtccttgttctttcgccttcat |
23588441 |
T |
|
| Q |
119 |
agacctgaatcagcacaccaggttggttatcagaataggtcgaaaacacctgctccttcttggtaggaattgttgtgtttctcggaattaacacagtcat |
218 |
Q |
| |
|
|||| ||||||| |||||||||||| |||||||| ||||| |||||||| |||||||||||||||||||| ||||||||||| ||||| || |||||||| |
|
|
| T |
23588440 |
agacttgaatcaacacaccaggttgattatcagagtaggttgaaaacacttgctccttcttggtaggaatggttgtgtttctaggaatcaatacagtcat |
23588341 |
T |
|
| Q |
219 |
gactcctcctgcagtctccaaaccaagggaaagatgagtaacatccagcaacaaaagatcctgtactttctcattgccttcgccgctcaaaatagcagct |
318 |
Q |
| |
|
||| |||||||| ||||||||||||||||| ||| ||||||||||||||||||| |||||||| |||||||||||||| || || ||||||||||||||| |
|
|
| T |
23588340 |
gacacctcctgcggtctccaaaccaagggagagaggagtaacatccagcaacaacagatcctgcactttctcattgccctcaccactcaaaatagcagct |
23588241 |
T |
|
| Q |
319 |
tggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaa |
418 |
Q |
| |
|
||||| || || ||||| |||||||| ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23588240 |
tggacggctgccccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaagttgttgaaccttgggaa |
23588141 |
T |
|
| Q |
419 |
tcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaa |
518 |
Q |
| |
|
||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23588140 |
tcctagtggatccaccaacaagaacaacatcatggacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaa |
23588041 |
T |
|
| Q |
519 |
tagatccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagta |
618 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
23588040 |
cagatccatgttgagctcttcaaaacgagcccgagtgatggtagtgtaaaagtcaataccctcaaacaatgaatcaatttcaatggtggtttgagcagta |
23587941 |
T |
|
| Q |
619 |
gaggaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattctt |
718 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
23587940 |
gaggaaagggtcctcttagctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattctt |
23587841 |
T |
|
| Q |
719 |
gaacaaaatggttcaccatcctgttatcaaaatct |
753 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
23587840 |
gaacaaaatggttcaccatcctgttatcaaaatct |
23587806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 124 - 753
Target Start/End: Original strand, 54395889 - 54396518
Alignment:
| Q |
124 |
tgaatcagcacaccaggttggttatcagaataggtcgaaaacacctgctccttcttggtaggaattgttgtgtttctcggaattaacacagtcatgactc |
223 |
Q |
| |
|
||||||| ||||||||||||||||| || || || || || | |||||||||||| |||||||| || ||||| || ||||| || ||||| || | |
|
|
| T |
54395889 |
tgaatcaaaacaccaggttggttatctgagtaagttgagaaaatctgctccttcttcgtaggaatcgtcgtgttccttggaatcaaagtcgtcataacac |
54395988 |
T |
|
| Q |
224 |
ctcctgcagtctccaaaccaagggaaagatgagtaacatccagcaacaaaagatcctgtactttctcattgccttcgccgctcaaaatagcagcttggac |
323 |
Q |
| |
|
| || ||||| ||||| || | |||| |||||||||| ||||||| |||||| || || || |||| ||||| ||||||||||| || ||||| || |
|
|
| T |
54395989 |
caccagcagtttccaaccccaaactaagaggagtaacatcaagcaacagaagatcttgaaccttttcatcaccttcaccgctcaaaatcgctgcttgaac |
54396088 |
T |
|
| Q |
324 |
tgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatccta |
423 |
Q |
| |
|
||||| |||||||||||||| ||||||||||| || ||||| ||||| || ||||||||||||||||| |||||||| |||||||| || |||||||| |
|
|
| T |
54396089 |
agcagcaccataagcaacagcttcatcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagctgttgaacttttggaatcctt |
54396188 |
T |
|
| Q |
424 |
gtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatagat |
523 |
Q |
| |
|
|| ||||| |||||||||||||| |||| ||| ||||||| |||||||||||||| | ||||||||||||||| |||||||| |||||||| | || |
|
|
| T |
54396189 |
gttgatccaccaacaagaacaacttcatgaacatgactcttatcaatcttagcatcccttagacacttctcaacaggttccatacatttcctaaacaaat |
54396288 |
T |
|
| Q |
524 |
ccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagtagagga |
623 |
Q |
| |
|
|||| || | |||||||| | || | ||||| || | || || ||||| || |||||||||||||||||||| || || || |||||||| || || |
|
|
| T |
54396289 |
ccatattcaattcttcaaatctcgcccttgtaatagttgcatagaaatcaattccttcaaacaaagaatcaatttctattgttgtctgagcagttgaaga |
54396388 |
T |
|
| Q |
624 |
aagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaaca |
723 |
Q |
| |
|
||| || |||||||||||||||||||| ||||| || || || | ||| |||| ||| ||||||||||| |||||||| |||||| | || || |||| |
|
|
| T |
54396389 |
aagtgttctcttagctctctcacaagctgttcttaatctcctcaaagctcttgcattaccactaatatccttcttatttttcctcctaaactccgaaaca |
54396488 |
T |
|
| Q |
724 |
aaatggttcaccatcctgttatcaaaatct |
753 |
Q |
| |
|
||||| |||||||| ||||||||||||||| |
|
|
| T |
54396489 |
aaatgattcaccattctgttatcaaaatct |
54396518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 312 - 479
Target Start/End: Original strand, 35132110 - 35132278
Alignment:
| Q |
312 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
411 |
Q |
| |
|
|||||| || ||||| || |||||||| ||||||||||| ||||| |||||||| || | |||||||| ||||| || | |||||| || || || || |
|
|
| T |
35132110 |
agcagcctgaactgctgccccataagctacagcctcatcggggttaatgctcttgcacaactccttccctttgaaaaagttttgcaatagctgctgcact |
35132209 |
T |
|
| Q |
412 |
ttgggaatcctagtcgatccgccaacaagaacaacatcatcgacac-tgttcttatccatcttagcatc |
479 |
Q |
| |
|
||||||||||||| || || |||||||||||||||||||| || | || |||| |||||||||||||| |
|
|
| T |
35132210 |
ttgggaatcctagaagaccctccaacaagaacaacatcatctacccttgctcttgtccatcttagcatc |
35132278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 304 - 452
Target Start/End: Complemental strand, 9336413 - 9336265
Alignment:
| Q |
304 |
ctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagtt |
403 |
Q |
| |
|
||||||||||||||||| || || || |||||||||||||||||||| |||||||| | | | | | ||||||||| ||||| || ||| |||| |||| |
|
|
| T |
9336413 |
ctcaaaatagcagcttgaacagctgcaccataagcaacagcctcatctgggttgatacccatgaataattccttccccttgaaaaattctagcaatagtt |
9336314 |
T |
|
| Q |
404 |
gttgaaccttgggaatcctagtcgatccgccaacaagaacaacatcatc |
452 |
Q |
| |
|
||| || || |||||||||| ||| || || |||||||||| |||||| |
|
|
| T |
9336313 |
cttgcactttcggaatcctagacgagccacccacaagaacaatatcatc |
9336265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 336 - 458
Target Start/End: Original strand, 30774930 - 30775052
Alignment:
| Q |
336 |
agcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatccgcca |
435 |
Q |
| |
|
|||||| ||||||||||| ||||||||||| || | ||||||||||||||||||| |||| |||| || || ||||||||||||| || || || |
|
|
| T |
30774930 |
agcaactgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccg |
30775029 |
T |
|
| Q |
436 |
acaagaacaacatcatcgacact |
458 |
Q |
| |
|
|||||||||| |||||| ||||| |
|
|
| T |
30775030 |
acaagaacaatatcatctacact |
30775052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 27)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 18 - 753
Target Start/End: Original strand, 8102027 - 8102762
Alignment:
| Q |
18 |
aacagtgatctgaggaacaccccttggagcaggaggaatacccgacaactcaaacttgcccaacaaattgttatcacgagtccttgttctttctccttcg |
117 |
Q |
| |
|
||||||||||||||||||||| | || || |||||||| || || | ||||||||| |||||||| |||||||| || || ||||| || ||||| |
|
|
| T |
8102027 |
aacagtgatctgaggaacaccgcggggtgctggaggaattccggaaagctcaaacttacccaacaagttgttatccttggttctggttctctcaccttca |
8102126 |
T |
|
| Q |
118 |
tagacctgaatcagcacaccaggttggttatcagaataggtcgaaaacacctgctccttcttggtaggaattgttgtgtttctcggaattaacacagtca |
217 |
Q |
| |
|
|| || || |||| |||||||||||||| || ||||| || || || || |||||||||||||| ||||| || ||||| || ||||| || ||||||| |
|
|
| T |
8102127 |
taaacttggatcaaaacaccaggttggttgtctgaatacgtagagaaaacttgctccttcttggttggaatggtagtgttccttggaatcaatacagtca |
8102226 |
T |
|
| Q |
218 |
tgactcctcctgcagtctccaaaccaagggaaagatgagtaacatccagcaacaaaagatcctgtactttctcattgccttcgccgctcaaaatagcagc |
317 |
Q |
| |
|
|||| |||||||||||||||||||| | || | | || ||||||| | ||| | ||| || || |||||||| ||||| || ||||| |||||||| |
|
|
| T |
8102227 |
tgacacctcctgcagtctccaaaccttgagacaatggggtgacatccaaaagcaacaaatcttgaaccttctcatttccttcaccactcaagatagcagc |
8102326 |
T |
|
| Q |
318 |
ttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttggga |
417 |
Q |
| |
|
||| || || || ||||||||||||||||| || ||||||||||| || || || ||||| ||||||||||| |||||||| ||||| ||||| |||||| |
|
|
| T |
8102327 |
ttgaacagcggcaccataagcaacagcctcgtcggggttgatgcttttgcatagctccttaccattgaagaagtcttgcaacagttgctgaactttggga |
8102426 |
T |
|
| Q |
418 |
atcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaa |
517 |
Q |
| |
|
|||||||| || || ||||||||||||||||||| || || |||| |||||||||||||| ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
8102427 |
atcctagttgaaccaccaacaagaacaacatcatgaactgtgctcttgtccatcttagcatctctcaaacacttctcaacaggctccatacacttcctga |
8102526 |
T |
|
| Q |
518 |
atagatccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagt |
617 |
Q |
| |
|
| ||||||||||| || || ||||| | || || || || || |||||||| |||| ||||||||||||||||||||| |||||||| ||||| || || |
|
|
| T |
8102527 |
acagatccatgttaagttcctcaaatctggcacgggtgattgtggtgtaaaaatcaacaccctcaaacaaagaatcaatctcaatggtagtttgtgcggt |
8102626 |
T |
|
| Q |
618 |
agaggaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattct |
717 |
Q |
| |
|
|| || ||||| ||||| ||||||||||| || |||||||| || ||||| ||||| || ||||| |||||||| ||||| ||||||||||| || ||| |
|
|
| T |
8102627 |
tgatgagagagttctcttcgctctctcacatgcggttctcaatctcctaagtgccctagggtttccgctaatatccttcttgttcttcctcttaaactct |
8102726 |
T |
|
| Q |
718 |
tgaacaaaatggttcaccatcctgttatcaaaatct |
753 |
Q |
| |
|
|||||||||||| | ||||| ||||||||||||||| |
|
|
| T |
8102727 |
tgaacaaaatgggtaaccattctgttatcaaaatct |
8102762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 22 - 753
Target Start/End: Complemental strand, 8018217 - 8017486
Alignment:
| Q |
22 |
gtgatctgaggaacaccccttggagcaggaggaatacccgacaactcaaacttgcccaacaaattgttatcacgagtccttgttctttctccttcgtaga |
121 |
Q |
| |
|
||||| ||||||||||| | || || |||||||| || || | ||| || || |||||||| ||||| || | || |||| ||| || ||||| || | |
|
|
| T |
8018217 |
gtgatttgaggaacaccacggggtgctggaggaatgccagaaagctcgaattttcccaacaagttgttgtctctggttcttgctctctcaccttcataaa |
8018118 |
T |
|
| Q |
122 |
cctgaatcagcacaccaggttggttatcagaataggtcgaaaacacctgctccttcttggtaggaattgttgtgtttctcggaattaacacagtcatgac |
221 |
Q |
| |
|
| || |||| |||||||||||||||||| || || || || || || |||||||||||||| |||||||| ||||| || |||||||| ||||||||||| |
|
|
| T |
8018117 |
cttggatcaacacaccaggttggttatctgagtaagtagagaaaacttgctccttcttggttggaattgtggtgttccttggaattaatacagtcatgac |
8018018 |
T |
|
| Q |
222 |
tcctcctgcagtctccaaaccaagggaaagatgagtaacatccagcaacaaaagatcctgtactttctcattgccttcgccgctcaaaatagcagcttgg |
321 |
Q |
| |
|
|| || ||||| || | ||| || || | |||| ||||||| | || | ||| || || || ||||||||||| || |||||||| || ||||| |
|
|
| T |
8018017 |
accaccagcagtttctagacccagagacaatggagtgacatccaaaagcagcaaatcttgaaccttttcattgccttcaccactcaaaattgctgcttgt |
8017918 |
T |
|
| Q |
322 |
actgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcc |
421 |
Q |
| |
|
|| || || ||||||||||||||||| || |||||||| ||||| ||||| || || |||||||||||||||||||| ||||| ||||| |||||||| | |
|
|
| T |
8017917 |
acagcggcaccataagcaacagcctcgtctgggttgatactcttgcaaagctctttaccattgaagaaatcttgcaacagttgctgaactttgggaattc |
8017818 |
T |
|
| Q |
422 |
tagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatag |
521 |
Q |
| |
|
|||| || |||||||||||||||||||||| ||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||| || || || |
|
|
| T |
8017817 |
tagttgaaccgccaacaagaacaacatcatgaacagagttcttgtccatcttagcatctctcaaacacttctcaacaggctccatacactttctgaacag |
8017718 |
T |
|
| Q |
522 |
atccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagtagag |
621 |
Q |
| |
|
||||||||| || || ||||| | || || || || || |||||||| |||| ||||||||||||||||||||| |||||||| ||||| |||||||| |
|
|
| T |
8017717 |
atccatgttaagttcctcaaatcttgcacgggtgattgtggtgtaaaaatcaacaccctcaaacaaagaatcaatctcaatggtagtttgtgcagtagaa |
8017618 |
T |
|
| Q |
622 |
gaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaa |
721 |
Q |
| |
|
|| ||||| ||||| |||||||||||||| || |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| || || |||| |
|
|
| T |
8017617 |
gagagagttctcttcgctctctcacaagctgtcctcaacctcctaagtgctctagggtttccactaatatccttcttgttcttcctcttaaactcctgaa |
8017518 |
T |
|
| Q |
722 |
caaaatggttcaccatcctgttatcaaaatct |
753 |
Q |
| |
|
||||||| || ||||| ||||| ||||||||| |
|
|
| T |
8017517 |
caaaatgattaaccattctgttgtcaaaatct |
8017486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 19 - 752
Target Start/End: Original strand, 39985007 - 39985740
Alignment:
| Q |
19 |
acagtgatctgaggaacaccccttggagcaggaggaatacccgacaactcaaacttgcccaacaaattgttatcacgagtccttgttctttctccttcgt |
118 |
Q |
| |
|
|||||||| || |||||||| || || ||||||||||| || || | ||||||||||||||||||||||| || | || ||||| || |||||||| |
|
|
| T |
39985007 |
acagtgatttggggaacacctctgggggcaggaggaatgccggaaagttcaaacttgcccaacaaattgttgtctcttgttcttgtcctctctccttcaa |
39985106 |
T |
|
| Q |
119 |
agacctgaatcagcacaccaggttggttatcagaataggtcgaaaacacctgctccttcttggtaggaattgttgtgtttctcggaattaacacagtcat |
218 |
Q |
| |
|
| || || |||| ||| ||||| ||||| |||||||| || || || ||||| || ||||| || ||||| || || || || || || | ||||||||| |
|
|
| T |
39985107 |
aaacttggatcaacacgccaggctggttgtcagaatatgtagagaaaacctgttctttctttgttggaatagtggtattccttgggataagcacagtcat |
39985206 |
T |
|
| Q |
219 |
gactcctcctgcagtctccaaaccaagggaaagatgagtaacatccagcaacaaaagatcctgtactttctcattgccttcgccgctcaaaatagcagct |
318 |
Q |
| |
|
|| || || ||||||||||||||||| || ||| | || ||||||| | | ||||||||| || ||||||||||| || || ||||| |||||||| |
|
|
| T |
39985207 |
cacaccaccagcagtctccaaaccaagagatagaggggtgacatccaaaaggagaagatcctgaaccttctcattgccctcaccactcaagatagcagcc |
39985306 |
T |
|
| Q |
319 |
tggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaa |
418 |
Q |
| |
|
|| || ||||| ||||| ||||||||||||||||| || |||||||| || || ||||| || || ||||||||||||||||||||||||||||| |||| |
|
|
| T |
39985307 |
tgaacagcagcaccatatgcaacagcctcatcaggatttatgctcttgcatagctcctttccgttaaagaaatcttgcaaaagttgttgaacctttggaa |
39985406 |
T |
|
| Q |
419 |
tcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaa |
518 |
Q |
| |
|
| || || || || || ||||| |||||||| | |||||| ||||| |||||||| ||||| |||||||| |||||||| ||||||||||| || ||||| |
|
|
| T |
39985407 |
ttctggtagaacctcctacaaggacaacatcgtggacacttttcttgtccatcttggcatctctcaaacatttctcaactggctccatacattttctaaa |
39985506 |
T |
|
| Q |
519 |
tagatccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagta |
618 |
Q |
| |
|
||||||||||||||||| ||||| | || |||||||||| | ||| || ||||| || ||||| | ||||||||||||||||||||| || |||||| |
|
|
| T |
39985507 |
gagatccatgttgagctcctcaaatcttgcacgagtaatgggggagtagaaatcaattccttcaaaaagagaatcaatttcaatggtggtctgggcagta |
39985606 |
T |
|
| Q |
619 |
gaggaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattctt |
718 |
Q |
| |
|
|| || ||||| ||||| ||||| ||||||||||| |||||||| |||||||| || || || ||||| || || ||||| ||||| |||||||| |||| |
|
|
| T |
39985607 |
gaagagagagttctcttcgctctttcacaagcagtcctcaacctcctaagagctctggggttgccactgatgtccttcttgttctttctcttgaactctt |
39985706 |
T |
|
| Q |
719 |
gaacaaaatggttcaccatcctgttatcaaaatc |
752 |
Q |
| |
|
||||||| ||||||||||| ||||| |||||||| |
|
|
| T |
39985707 |
gaacaaagtggttcaccattctgttgtcaaaatc |
39985740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 312 - 511
Target Start/End: Original strand, 17259895 - 17260094
Alignment:
| Q |
312 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
411 |
Q |
| |
|
|||||| || || ||||| ||||||||||||||||||||||||||||||||||| || | |||||| || ||||||||||| ||||| ||||| || || |
|
|
| T |
17259895 |
agcagcctgaacagcagcaccataagcaacagcctcatcagggttgatgctcttgcataattccttacccttgaagaaatcctgcaatagttgctgcact |
17259994 |
T |
|
| Q |
412 |
ttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacact |
511 |
Q |
| |
|
|| |||||||||| ||||| |||||||| ||||||||||| | ||| |||| || |||||| |||| || | ||||||||||||| |||||| |||| |
|
|
| T |
17259995 |
ttcggaatcctagaagatccaccaacaaggacaacatcatcaattctgctcttgtcaatcttaccatcactaagacacttctcaacaatctccatgcact |
17260094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 312 - 479
Target Start/End: Original strand, 8575980 - 8576147
Alignment:
| Q |
312 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
411 |
Q |
| |
|
|||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||| ||||| | || || || || ||| || |
|
|
| T |
8575980 |
agcagcttggacaacagcaccataagcaacagcctcatcagggttgatgctcttacataattccttccccttgaaaacctcctgtaatagctgtctcact |
8576079 |
T |
|
| Q |
412 |
ttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatc |
479 |
Q |
| |
|
|| |||||||||| || || |||||||| ||||||||||| ||||| ||||| |||||||||||||| |
|
|
| T |
8576080 |
ttaggaatcctagaagaaccaccaacaaggacaacatcatctacactattcttgtccatcttagcatc |
8576147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 312 - 511
Target Start/End: Original strand, 17267593 - 17267792
Alignment:
| Q |
312 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
411 |
Q |
| |
|
|||||| || || ||||| ||||||||||||||||||||||||||||| || || || | ||||||||| |||||||| | ||||| ||||| || || |
|
|
| T |
17267593 |
agcagcctgaacagcagcaccataagcaacagcctcatcagggttgatacttttgcataattccttccccttgaagaagttctgcaatagttgctgcact |
17267692 |
T |
|
| Q |
412 |
ttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacact |
511 |
Q |
| |
|
|| |||||||||| || || |||||||| ||||||||||| || ||| |||| || ||||||||||| || | ||||||||||||| |||||| |||| |
|
|
| T |
17267693 |
ttcggaatcctagaagacccaccaacaaggacaacatcatcaactctgctcttgtcaatcttagcatcactaagacacttctcaacaatctccatgcact |
17267792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 312 - 478
Target Start/End: Original strand, 8590292 - 8590458
Alignment:
| Q |
312 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
411 |
Q |
| |
|
||||||||| || || || |||||||||||||||||||| || |||||||| || |||| |||||||| | || || |||||||| || || || || |
|
|
| T |
8590292 |
agcagcttgaacagctgcaccataagcaacagcctcatctggattgatgctattgtaaagatccttccccataaaaaagtcttgcaatagctgctgcact |
8590391 |
T |
|
| Q |
412 |
ttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcat |
478 |
Q |
| |
|
||||||||||||| || || |||||||| ||||||||||| ||| ||||||| ||||||||||||| |
|
|
| T |
8590392 |
ttgggaatcctagaagaaccaccaacaagtacaacatcatctacaatgttcttgtccatcttagcat |
8590458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 313 - 470
Target Start/End: Complemental strand, 8636856 - 8636699
Alignment:
| Q |
313 |
gcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacct |
412 |
Q |
| |
|
||||| |||||||| || |||||||||||||||||||||| ||||||||||||||| ||||||||| | || || | || || || ||||| || |||| |
|
|
| T |
8636856 |
gcagcctggactgctgctccataagcaacagcctcatcagcgttgatgctcttacacagttccttcgccttaaaaatgtcctgtaatagttgctgcacct |
8636757 |
T |
|
| Q |
413 |
tgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccat |
470 |
Q |
| |
|
| |||||||||| || || |||||||| ||||||||||| | | || |||||||||| |
|
|
| T |
8636756 |
ttggaatcctagaggagccaccaacaaggacaacatcatctatattgctcttatccat |
8636699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 312 - 479
Target Start/End: Original strand, 8609571 - 8609738
Alignment:
| Q |
312 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
411 |
Q |
| |
|
|||||| ||||| ||||| ||||||||||| ||||||||||||||||||||| |||| | ||||| |||||||| || ||||||| || || | || |
|
|
| T |
8609571 |
agcagcctggacagcagcaccataagcaaccgcctcatcagggttgatgctcatacacaaatcctttccattgaaaaagtcttgcagtagctgcttcact |
8609670 |
T |
|
| Q |
412 |
ttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatc |
479 |
Q |
| |
|
|| |||||||||| || || |||||||||||||||||||| || | ||||||||||| | |||||| |
|
|
| T |
8609671 |
ttcggaatcctagaagaacctccaacaagaacaacatcatctacggttttcttatccatttcagcatc |
8609738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 312 - 518
Target Start/End: Original strand, 8601628 - 8601834
Alignment:
| Q |
312 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
411 |
Q |
| |
|
||||||||| ||||| |||||||| ||||| ||||||||||| ||||||||| |||| ||||||| |||||| || |||| || | |||||| || |
|
|
| T |
8601628 |
agcagcttgaactgctgcgccataggcaactgcctcatcaggattgatgctcacgcaaatgtccttccaattgaaaaattctttcagtaattgttgcact |
8601727 |
T |
|
| Q |
412 |
ttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacact |
511 |
Q |
| |
|
||||||||||||| || ||||||||||| ||| ||||||| ||||| |||| || |||| |||||| || | ||| | ||||||| ||| ||||||| |
|
|
| T |
8601728 |
ttgggaatcctagaagaaccgccaacaaggacagcatcatccacactactcttttcgatctgagcatcactaagacaactttcaacagtctctatacact |
8601827 |
T |
|
| Q |
512 |
tcctaaa |
518 |
Q |
| |
|
|| |||| |
|
|
| T |
8601828 |
tcttaaa |
8601834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 312 - 479
Target Start/End: Original strand, 8545287 - 8545454
Alignment:
| Q |
312 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
411 |
Q |
| |
|
|||||| ||||| || || |||||||||||||||||||||||||| |||||||| || | ||||||||| || || || || || || || ||| || |
|
|
| T |
8545287 |
agcagcctggacagctgcaccataagcaacagcctcatcagggttaatgctcttgcataattccttccccttaaaaaactcctgtaatagctgtctcact |
8545386 |
T |
|
| Q |
412 |
ttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatc |
479 |
Q |
| |
|
|| |||||||||| || ||||||||||| ||||||||||| ||||| ||| |||||||||||||| |
|
|
| T |
8545387 |
ttaggaatcctagaagaaccgccaacaaggacaacatcatctacactacccttgtccatcttagcatc |
8545454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 331 - 479
Target Start/End: Complemental strand, 7878228 - 7878080
Alignment:
| Q |
331 |
ccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatc |
430 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||| | |||| |||||||| || || || || ||||| || || || || ||| ||||||||| |||| |
|
|
| T |
7878228 |
ccataagcaacagcttcatccgggttgatgctactgcaaatatccttccccttaaaaaagtcctgcaatagctgctgcactttgagaatcctagatgatc |
7878129 |
T |
|
| Q |
431 |
cgccaacaagaacaacatcatcgacactgttcttatccatcttagcatc |
479 |
Q |
| |
|
| |||||||| ||||||||||| ||| ||||||| |||||| ||||||| |
|
|
| T |
7878128 |
caccaacaagtacaacatcatctacattgttcttgtccatcatagcatc |
7878080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 302 - 476
Target Start/End: Original strand, 6789156 - 6789330
Alignment:
| Q |
302 |
cgctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaag |
401 |
Q |
| |
|
||||||| | |||||| ||||| || || || |||||||||||||||||||||||||||||| | || | ||||| || |||| | |||||||| || |
|
|
| T |
6789156 |
cgctcaacaaagcagcctggacagctgcaccgtaagcaacagcctcatcagggttgatgctcatgcacaaatcctttcccatgaaaacttcttgcaatag |
6789255 |
T |
|
| Q |
402 |
ttgttgaaccttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagc |
476 |
Q |
| |
|
|||||| || |||||||| |||| || || |||||||| |||||||||| ||| | |||| ||||||||||| |
|
|
| T |
6789256 |
ttgttgcactttgggaattctagaagacccaccaacaaggacaacatcatttacaatactcttgtccatcttagc |
6789330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 312 - 746
Target Start/End: Complemental strand, 8383390 - 8382956
Alignment:
| Q |
312 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
411 |
Q |
| |
|
|||||||| ||||| || ||||||||||||||||| ||||| || |||||| |||||| ||||||| |||||| || | |||||| || | ||| || |
|
|
| T |
8383390 |
agcagctttaactgctgcaccataagcaacagcctcgtcaggatttatgctcacacaaaggtccttccaattgaaaaagtgttgcaatagctcttgcact |
8383291 |
T |
|
| Q |
412 |
ttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacact |
511 |
Q |
| |
|
||||||||||| | || || || | |||||||||||||| ||||| |||| | |||||||||||| | | ||| ||||||||| ||||||||||| |
|
|
| T |
8383290 |
ttgggaatcctcgaagaaccaccgatgagaacaacatcatctacactactcttgttcatcttagcatcagtaagacagctctcaacagtctccatacact |
8383191 |
T |
|
| Q |
512 |
tcctaaatagatccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttg |
611 |
Q |
| |
|
| |||||| ||||| ||||| | ||||| || ||||| | | || | ||| |||||||||||| ||| || ||| || ||||| | || | |
|
|
| T |
8383190 |
tttcaaataggtccatattgagttgctcaaatttggcccgagtgactgaagaattaaaatcaataccctcatacagagcatctatgtcaatcgcggcctc |
8383091 |
T |
|
| Q |
612 |
agcagtagaggaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttg |
711 |
Q |
| |
|
| | | | ||||| ||||| || || ||||| ||||| ||||| ||||||||||||||| |||| || |||||||| || || |||| |||||||||| |
|
|
| T |
8383090 |
aatatcaaatgaaagtgtcctttttgccctctcgcaagccgttcttaaccttctaagagcctttgggttcccactaatgtccttattatgcttcctcttg |
8382991 |
T |
|
| Q |
712 |
aattcttgaacaaaatggttcaccatcctgttatc |
746 |
Q |
| |
|
|| || | |||||| | ||||| || |||||||| |
|
|
| T |
8382990 |
aactcgtcaacaaagtacttcacgattctgttatc |
8382956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 325 - 479
Target Start/End: Original strand, 8581367 - 8581521
Alignment:
| Q |
325 |
gcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctag |
424 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| || | ||||||||| | ||| || || || || || ||| || || |||||||||| |
|
|
| T |
8581367 |
gcagcaccataagcaacagcctcatcagggttgatgctcttgcataattccttcccctggaaaaactcctgtaatagctgtctcactttaggaatcctag |
8581466 |
T |
|
| Q |
425 |
tcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatc |
479 |
Q |
| |
|
|| || |||||||| ||||||||||| ||||| | | |||||||||||||| |
|
|
| T |
8581467 |
aagaaccaccaacaaggacaacatcatctacactacccctgtccatcttagcatc |
8581521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 334 - 479
Target Start/End: Original strand, 8569987 - 8570132
Alignment:
| Q |
334 |
taagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatccgc |
433 |
Q |
| |
|
||||||||||||||||||||||| ||||| || || | ||||||||| | ||| || ||||| || || || || || |||||||||| || || | |
|
|
| T |
8569987 |
taagcaacagcctcatcagggttaatgctgttgcataattccttcccctggaaaaactcttgtaatagctgcctcactttaggaatcctagaagaaccac |
8570086 |
T |
|
| Q |
434 |
caacaagaacaacatcatcgacactgttcttatccatcttagcatc |
479 |
Q |
| |
|
||||||| ||||||||||| ||||| ||||| |||||||||||||| |
|
|
| T |
8570087 |
caacaaggacaacatcatctacactattcttttccatcttagcatc |
8570132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 301 - 380
Target Start/End: Original strand, 8537679 - 8537758
Alignment:
| Q |
301 |
ccgctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttccc |
380 |
Q |
| |
|
|||||||| | |||||| ||||| ||||| |||||||||||||| ||||||||||||||||| ||| ||| |||||||| |
|
|
| T |
8537679 |
ccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgcttttaaaaatatccttccc |
8537758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 331 - 424
Target Start/End: Complemental strand, 29582336 - 29582243
Alignment:
| Q |
331 |
ccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctag |
424 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | || | |||||||| ||||| || |||||||| || || || || |||||||| |||| |
|
|
| T |
29582336 |
ccataagcaacagcctcatcagggttgatgctcatgcacaaatccttccccttgaaaaattcttgcaatagctgatgcactttgggaattctag |
29582243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 304 - 452
Target Start/End: Complemental strand, 10494896 - 10494748
Alignment:
| Q |
304 |
ctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagtt |
403 |
Q |
| |
|
|||||||||||||| || || || || |||||||||||||||||||| |||||||| | | | | | ||||||||| ||||| || ||| |||| || | |
|
|
| T |
10494896 |
ctcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatagat |
10494797 |
T |
|
| Q |
404 |
gttgaaccttgggaatcctagtcgatccgccaacaagaacaacatcatc |
452 |
Q |
| |
|
|| || ||||||||||||| ||| || || |||||||||| |||||| |
|
|
| T |
10494796 |
cctgcactttgggaatcctagacgagccacccacaagaacaatatcatc |
10494748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 622 - 753
Target Start/End: Original strand, 8581664 - 8581795
Alignment:
| Q |
622 |
gaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaa |
721 |
Q |
| |
|
||||| ||||| || ||||||||||||||||| ||||||||||||| || ||||||||||| |||| || | |||| || |||||||| || | |
|
|
| T |
8581664 |
gaaagtgtccttttcgctctctcacaagcagtcctcaaccttctaatggcttttggatttccaataatctcctctttatgttttctcttgaactccgaca |
8581763 |
T |
|
| Q |
722 |
caaaatggttcaccatcctgttatcaaaatct |
753 |
Q |
| |
|
|||| || |||||||| ||||||||||||||| |
|
|
| T |
8581764 |
caaagtgattcaccattctgttatcaaaatct |
8581795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 628 - 749
Target Start/End: Complemental strand, 7877931 - 7877810
Alignment:
| Q |
628 |
gtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaat |
727 |
Q |
| |
|
||||| ||||| |||||||| |||||||||||||| ||||| ||||| || ||||||| ||| || |||||||||||||| || || || |||| |
|
|
| T |
7877931 |
gtccttttagccctctcacatgcagttctcaacctcctaagggccctcgggtttccaccaatgtccactttattcttcctcttaaactccatcactaaat |
7877832 |
T |
|
| Q |
728 |
ggttcaccatcctgttatcaaa |
749 |
Q |
| |
|
|||||| ||| ||||||||||| |
|
|
| T |
7877831 |
ggttcaacattctgttatcaaa |
7877810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 622 - 695
Target Start/End: Original strand, 8609881 - 8609954
Alignment:
| Q |
622 |
gaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatcttt |
695 |
Q |
| |
|
||||| |||||||| || |||||||||||||| |||||||| ||||||||||| | || ||||| |||||||| |
|
|
| T |
8609881 |
gaaagtgtcctctttgccctctcacaagcagtcctcaacctcctaagagccctcgagttcccactgatatcttt |
8609954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 312 - 368
Target Start/End: Original strand, 3146918 - 3146974
Alignment:
| Q |
312 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttaca |
368 |
Q |
| |
|
||||||||| || || || ||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
3146918 |
agcagcttgcacagctgcaccataagcaacggcctcatcagggttgatgctgttaca |
3146974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 328 - 451
Target Start/End: Original strand, 8646547 - 8646670
Alignment:
| Q |
328 |
gcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcg |
427 |
Q |
| |
|
|||||||||||||| ||| |||||||||||||||||| || | ||||||| ||||||| || || | || | ||||| || || ||||| |||| | |
|
|
| T |
8646547 |
gcgccataagcaacggccacatcagggttgatgctctcgcataattccttctcattgaaaaactccttcagcatctgttgtacttttggaattctagagg |
8646646 |
T |
|
| Q |
428 |
atccgccaacaagaacaacatcat |
451 |
Q |
| |
|
| || ||||||||||||||||||| |
|
|
| T |
8646647 |
agccaccaacaagaacaacatcat |
8646670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 304 - 359
Target Start/End: Original strand, 8654096 - 8654151
Alignment:
| Q |
304 |
ctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgat |
359 |
Q |
| |
|
|||||||||||||| || || ||||||||||| |||| ||||||||| |||||||| |
|
|
| T |
8654096 |
ctcaaaatagcagcctgaacagcagcgccatatgcaatagcctcatctgggttgat |
8654151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 304 - 359
Target Start/End: Complemental strand, 13333890 - 13333835
Alignment:
| Q |
304 |
ctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgat |
359 |
Q |
| |
|
|||||||||||||| || || || || |||||||||||||||||||| |||||||| |
|
|
| T |
13333890 |
ctcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgat |
13333835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 335 - 365
Target Start/End: Complemental strand, 27846597 - 27846567
Alignment:
| Q |
335 |
aagcaacagcctcatcagggttgatgctctt |
365 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
27846597 |
aagcaacagcctcatcagggttgatgctctt |
27846567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 123; Significance: 9e-63; HSPs: 14)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 322 - 752
Target Start/End: Complemental strand, 17648545 - 17648115
Alignment:
| Q |
322 |
actgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcc |
421 |
Q |
| |
|
|||||||| ||||| |||||||||||||| || || ||||| || || || ||||| || | |||||||| ||||| |||||||||||||| ||||| | |
|
|
| T |
17648545 |
actgcagcaccatatgcaacagcctcatcgggattaatgctattgcatagctcctttccgtcaaagaaatcctgcaatagttgttgaacctttggaattc |
17648446 |
T |
|
| Q |
422 |
tagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatag |
521 |
Q |
| |
|
| || || ||||| ||||| |||| ||||| |||||| || || |||||| ||||||| |||||||| ||||||| |||||||||| |||||||| || |
|
|
| T |
17648445 |
ttgtagaaccgcctacaaggacaatatcatggacactttttttgtccatcctagcatctctcaaacatatctcaacttgctccatacatttcctaaagag |
17648346 |
T |
|
| Q |
522 |
atccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagtagag |
621 |
Q |
| |
|
||||||||||||||| ||||| | || |||||||||| | | | || ||||| ||||| || | | |||||||||||||||||||||| |||| | |
|
|
| T |
17648345 |
atccatgttgagctcctcaaatcttgcacgagtaatggaggagcagaaatcaattccctcgaatagacaatcaatttcaatggtggtttggagagtaaat |
17648246 |
T |
|
| Q |
622 |
gaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaa |
721 |
Q |
| |
|
|| ||||| ||||| || ||||||||||||| |||||||| ||||||| ||||| || |||||||| || ||||| ||||| |||||||| |||||| |
|
|
| T |
17648245 |
gatagagttctcttggccttctcacaagcagtcctcaacctcataagagctcttgggttgccactaatgtccttcttgttctttctcttgaacacttgaa |
17648146 |
T |
|
| Q |
722 |
caaaatggttcaccatcctgttatcaaaatc |
752 |
Q |
| |
|
|||| || |||||||| ||||||| |||||| |
|
|
| T |
17648145 |
caaagtgattcaccattctgttattaaaatc |
17648115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 322 - 752
Target Start/End: Complemental strand, 17717191 - 17716761
Alignment:
| Q |
322 |
actgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcc |
421 |
Q |
| |
|
||||| || ||||| |||||||||||||| || || |||||||| || || ||||| | || |||||||| ||||| |||||||||||||| ||||| | |
|
|
| T |
17717191 |
actgccgcaccatatgcaacagcctcatcgggattaatgctcttgcatagctcctttctgttaaagaaatcctgcaatagttgttgaacctttggaattc |
17717092 |
T |
|
| Q |
422 |
tagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatag |
521 |
Q |
| |
|
| || || || || ||||| |||||||||| |||||| || | |||| ||||| |||||||| |||||||| |||||||||| | ||| || || |
|
|
| T |
17717091 |
tggtagaacctcctacaaggacaacatcatggacacttcctttgtacatcccagcatggctcaaacatttctcaacttgctccatacattccctgaagag |
17716992 |
T |
|
| Q |
522 |
atccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagtagag |
621 |
Q |
| |
|
||||| ||||||||||||||| | || |||||||||| || || || ||||| |||||||| | | ||||||||||||||||||| || |||||||| |
|
|
| T |
17716991 |
atccaagttgagctcttcaaatctggcacgagtaatgggggtatagaaatcaattccctcaaatagacaatcaatttcaatggtggtctgggcagtagat |
17716892 |
T |
|
| Q |
622 |
gaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaa |
721 |
Q |
| |
|
|| |||| ||||| || |||||||||||||| |||||||| ||||||| ||||| || |||||||| || ||||| ||||| |||||||| ||| ||| |
|
|
| T |
17716891 |
gatagagctctcttcgccctctcacaagcagtcctcaacctcataagagctcttgggttgccactaatgtccttcttgttctttctcttgaactctcgaa |
17716792 |
T |
|
| Q |
722 |
caaaatggttcaccatcctgttatcaaaatc |
752 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||| |
|
|
| T |
17716791 |
caaagtggttcaccattctgttattaaaatc |
17716761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 322 - 752
Target Start/End: Complemental strand, 17622449 - 17622019
Alignment:
| Q |
322 |
actgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcc |
421 |
Q |
| |
|
|||||||| ||| | ||||||||||| || || || ||||| || || || ||||| || || |||||||| ||||| | |||||||||||| ||||| | |
|
|
| T |
17622449 |
actgcagcaccacacgcaacagcctcgtcgggattaatgctattgcatagctcctttccgttaaagaaatcctgcaataattgttgaacctttggaattc |
17622350 |
T |
|
| Q |
422 |
tagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatag |
521 |
Q |
| |
|
| || || || || ||||| |||||||||| |||||| | || |||||| |||||| |||||||| |||||||| |||||||||| |||||||| || |
|
|
| T |
17622349 |
tggtagaacctcctacaaggacaacatcatggacacttgttttgtccatcctagcatttctcaaacatttctcaacttgctccatacatttcctaaagag |
17622250 |
T |
|
| Q |
522 |
atccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagtagag |
621 |
Q |
| |
|
|||||||||||||| |||||| || |||||||||| | | | || ||||| ||||| || | | |||||||||||||||||||||| ||||| | |
|
|
| T |
17622249 |
atccatgttgagcttttcaaatgtggcacgagtaatgggggagcagaaatcaattccctcgaatagacaatcaatttcaatggtggtttggacagtaaat |
17622150 |
T |
|
| Q |
622 |
gaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaa |
721 |
Q |
| |
|
|| ||||| ||||| || ||||||||||||| |||||||| ||||||| ||||| || ||||| || || ||||| ||||| |||||||| ||||||| |
|
|
| T |
17622149 |
gatagagttctcttggccttctcacaagcagtcctcaacctcataagagctcttgggttgccactgatgtccttcttgttctttctcttgaactcttgaa |
17622050 |
T |
|
| Q |
722 |
caaaatggttcaccatcctgttatcaaaatc |
752 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||| |
|
|
| T |
17622049 |
caaagtggttcaccattctgttattaaaatc |
17622019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 322 - 752
Target Start/End: Complemental strand, 17718455 - 17718025
Alignment:
| Q |
322 |
actgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcc |
421 |
Q |
| |
|
|||||||| ||||| |||||||||||||| || || |||||||| || || ||||| || || |||| ||| ||| | |||||||||||||| ||||| |
|
|
| T |
17718455 |
actgcagcaccatatgcaacagcctcatcgggattaatgctcttgcatagatcctttccgttaaagacatcctgccatagttgttgaacctttggaattt |
17718356 |
T |
|
| Q |
422 |
tagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatag |
521 |
Q |
| |
|
| || || || || ||||| |||||||||| |||||| || | |||| |||| |||||||| |||||||| |||||||||| | ||| || || |
|
|
| T |
17718355 |
tggtagaacctcctacaaggacaacatcatggacacttcctttgttcatcccagcacgtctcaaacatttctcaacttgctccatacattccctgaagag |
17718256 |
T |
|
| Q |
522 |
atccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagtagag |
621 |
Q |
| |
|
||||| ||||||||||||||| | || |||||||||| || || || ||||| |||||||| | | ||||||||||||||||||| || | |||||| |
|
|
| T |
17718255 |
atccaagttgagctcttcaaatctggcacgagtaatgggggtatagaaatcaattccctcaaatagacaatcaatttcaatggtggtctgggaagtagat |
17718156 |
T |
|
| Q |
622 |
gaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaa |
721 |
Q |
| |
|
|| |||| ||||| || |||||||||||||| |||||| | ||||||| ||||| || |||||||| || ||||| ||||| |||||||| ||||||| |
|
|
| T |
17718155 |
gatagagctctcttcgccctctcacaagcagtcctcaacttcataagagctcttgggttgccactaatgtccttcttgttctttctcttgaactcttgaa |
17718056 |
T |
|
| Q |
722 |
caaaatggttcaccatcctgttatcaaaatc |
752 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||| |
|
|
| T |
17718055 |
caaagtggttcaccattctgttattaaaatc |
17718025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 324 - 752
Target Start/End: Complemental strand, 17667185 - 17666757
Alignment:
| Q |
324 |
tgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatccta |
423 |
Q |
| |
|
|||||| ||||| |||||||||| | || || ||||| || || || ||||| || || |||||||| ||||| | |||||||||||| ||||| || |
|
|
| T |
17667185 |
tgcagcaccatacacaacagcctcgttgggattaatgctattgcatagctcctttccgttaaagaaatcctgcaataattgttgaacctttggaattctg |
17667086 |
T |
|
| Q |
424 |
gtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatagat |
523 |
Q |
| |
|
|| || || || ||||| |||||||||| |||||| | || ||||||||||||| |||||||| |||||||| |||||||||| |||||||| |||| |
|
|
| T |
17667085 |
gtagaacctcctacaaggacaacatcatggacacttcttttgtccatcttagcatttctcaaacatttctcaacttgctccatacatttcctaaagagat |
17666986 |
T |
|
| Q |
524 |
ccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagtagagga |
623 |
Q |
| |
|
||||||||||||||||||| || ||||||||| | | | || ||||| ||||| || | | | ||||||||||||||||| ||||||||||| || |
|
|
| T |
17666985 |
ccatgttgagctcttcaaatgtggcacgagtaatgaaggagcagaaatcaattccctcgaatagacattcaatttcaatggtggtctgagcagtagatga |
17666886 |
T |
|
| Q |
624 |
aagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaaca |
723 |
Q |
| |
|
|||| ||||| || |||||||||||||| | |||||| ||||||| ||||| || ||||| || || || || ||||| || ||||| ||||||||| |
|
|
| T |
17666885 |
tagagctctcttcgccctctcacaagcagtccccaacctcataagagctcttgggttgccactgatgtccttgttgttctttcttttgaactcttgaaca |
17666786 |
T |
|
| Q |
724 |
aaatggttcaccatcctgttatcaaaatc |
752 |
Q |
| |
|
|| || |||||||| ||||||| |||||| |
|
|
| T |
17666785 |
aagtgattcaccattctgttattaaaatc |
17666757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 385 - 752
Target Start/End: Complemental strand, 17704496 - 17704129
Alignment:
| Q |
385 |
aagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctca |
484 |
Q |
| |
|
|||||||| ||||| |||||||||||||| ||||| || || || || || ||||| |||||||||| |||||| | || |||||| ||||| |||| |
|
|
| T |
17704496 |
aagaaatcctgcaatagttgttgaacctttggaattctggtagaacctcctacaaggacaacatcatggacacttgttttgtccatcctagcaaatctca |
17704397 |
T |
|
| Q |
485 |
aacacttctcaacaggctccatacacttcctaaatagatccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaa |
584 |
Q |
| |
|
|| ||||| |||| ||||||||| ||| |||| ||||||||||||||||||||||| | || ||||||||| | ||| | || || || |||| || |
|
|
| T |
17704396 |
aaagtttctcgacagtctccatacatttcataaagagatccatgttgagctcttcaaatctggcacgagtaatgatggtgaagaaatccattcccttgaa |
17704297 |
T |
|
| Q |
585 |
caaagaatcaatttcaatggtggtttgagcagtagaggaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttcca |
684 |
Q |
| |
|
||| || ||||||||||||||||||| |||| | || ||||| ||||| || ||||||||||||| |||||||| ||||||| ||| | | ||| |
|
|
| T |
17704296 |
taaacaaacaatttcaatggtggtttggagagtaaatgatagagttctcttggccttctcacaagcagtcctcaacctcataagagctctttggtcgcca |
17704197 |
T |
|
| Q |
685 |
ctaatatctttcttattcttcctcttgaattcttgaacaaaatggttcaccatcctgttatcaaaatc |
752 |
Q |
| |
|
|| || || ||| | ||||| |||||||| ||||||||||| | ||||||||| ||||||| |||||| |
|
|
| T |
17704196 |
ctgatgtccttcctgttctttctcttgaactcttgaacaaagtagttcaccattctgttattaaaatc |
17704129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 322 - 542
Target Start/End: Complemental strand, 17706216 - 17705997
Alignment:
| Q |
322 |
actgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcc |
421 |
Q |
| |
|
|||||||| ||||| |||||||||||||| || || ||||| || || || ||||| || | |||||||| |||| | ||| ||||||||| ||||| | |
|
|
| T |
17706216 |
actgcagcaccatatgcaacagcctcatcgggattaatgctattgcatagctcctttccgtcaaagaaatcctgcata-gtttttgaacctttggaattc |
17706118 |
T |
|
| Q |
422 |
tagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatag |
521 |
Q |
| |
|
| || || || || ||||| |||||||||| |||||| || || |||||||||||||| |||||||| |||||||| |||||||||| |||||||| || |
|
|
| T |
17706117 |
tggtagaacctcctacaaggacaacatcatggacactttttttgtccatcttagcatctctcaaacatttctcaacttgctccatacatttcctaaagag |
17706018 |
T |
|
| Q |
522 |
atccatgttgagctcttcaaa |
542 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
17706017 |
atccatgttgagctcttcaaa |
17705997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 312 - 452
Target Start/End: Complemental strand, 12245920 - 12245780
Alignment:
| Q |
312 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
411 |
Q |
| |
|
||||||||| || || || ||||||||||||||||| |||||||| |||||||| || | ||||||||| ||||| || || || || || ||||| || |
|
|
| T |
12245920 |
agcagcttgaacagctgccccataagcaacagcctcgtcagggttaatgctcttgcacaattccttcccgttgaaaaagtcctgtaatagctgttggact |
12245821 |
T |
|
| Q |
412 |
ttgggaatcctagtcgatccgccaacaagaacaacatcatc |
452 |
Q |
| |
|
||||||||||||| ||||| |||||||| |||| |||||| |
|
|
| T |
12245820 |
ttgggaatcctagaagatccaccaacaagtacaaaatcatc |
12245780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 312 - 389
Target Start/End: Complemental strand, 16662506 - 16662429
Alignment:
| Q |
312 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaa |
389 |
Q |
| |
|
||||||||| || || || ||||||||||||||||||||||||||||||||||| || | ||||||||||||||||| |
|
|
| T |
16662506 |
agcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaactccttcccattgaagaa |
16662429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 304 - 449
Target Start/End: Original strand, 43625058 - 43625203
Alignment:
| Q |
304 |
ctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagtt |
403 |
Q |
| |
|
|||||||||||||| ||||| || || |||||||||||||||||||||||||| ||||| | || ||||||||| ||||| || || ||||| || | |
|
|
| T |
43625058 |
ctcaaaatagcagcctggacagctgcaccataagcaacagcctcatcagggtttatgctttcgcatgattccttccccttgaaaaactcctgcaacagct |
43625157 |
T |
|
| Q |
404 |
gttgaaccttgggaatcctagtcgatccgccaacaagaacaacatc |
449 |
Q |
| |
|
||| || || ||||| |||| || ||||||||||| |||||||| |
|
|
| T |
43625158 |
gttttacttttggaattctagaggagccgccaacaaggacaacatc |
43625203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 312 - 452
Target Start/End: Original strand, 11999062 - 11999201
Alignment:
| Q |
312 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
411 |
Q |
| |
|
||||||||| || || || |||||||| ||||||||||||||||| |||||||| || | |||||||| ||||| || || || || || ||||| || |
|
|
| T |
11999062 |
agcagcttgaacagctgccccataagctacagcctcatcagggttaatgctcttgcacaactccttcccgttgaaaaagtcatgtaatagctgttggact |
11999161 |
T |
|
| Q |
412 |
ttgggaatcctagtcgatccgccaacaagaacaacatcatc |
452 |
Q |
| |
|
||||| ||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
11999162 |
ttggg-atcctagaagatccaccaacaagtacaacatcatc |
11999201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 332 - 479
Target Start/End: Original strand, 12234364 - 12234510
Alignment:
| Q |
332 |
cataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatcc |
431 |
Q |
| |
|
|||||||||| ||||| |||||||| || ||||| || || |||||||| ||||| ||||| ||||| ||||| || || ||||||||||||| || || |
|
|
| T |
12234364 |
cataagcaaccgcctc-tcagggttaatactcttgcacagctccttccccttgaaaaaatcctgcaatagttgctgcactttgggaatcctagaggaccc |
12234462 |
T |
|
| Q |
432 |
gccaacaagaacaacatcatcgacactgttcttatccatcttagcatc |
479 |
Q |
| |
|
||||| ||| ||||| ||||| || || | || |||||||||||||| |
|
|
| T |
12234463 |
gccaataaggacaacttcatccaccctacttttgtccatcttagcatc |
12234510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 641 - 752
Target Start/End: Complemental strand, 17705923 - 17705812
Alignment:
| Q |
641 |
tctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggttcaccatcct |
740 |
Q |
| |
|
||||||||||||| ||| ||| ||||||| | ||| || |||||||| || ||||| ||||| |||||||| |||| |||||| ||||||||||| || |
|
|
| T |
17705923 |
tctcacaagcagtcctcgaccacataagagctcatgggttgccactaatgtccttcttcttctttctcttgaactcttaaacaaagtggttcaccattct |
17705824 |
T |
|
| Q |
741 |
gttatcaaaatc |
752 |
Q |
| |
|
||||| |||||| |
|
|
| T |
17705823 |
gttattaaaatc |
17705812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 304 - 452
Target Start/End: Complemental strand, 16658039 - 16657891
Alignment:
| Q |
304 |
ctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagtt |
403 |
Q |
| |
|
||||||||||||||||| || || || || ||||||||||| ||||| |||||||| || || || | ||||| || ||||| || |||||||| || | |
|
|
| T |
16658039 |
ctcaaaatagcagcttgaacagctgcaccgtaagcaacagcttcatccgggttgatacttttgcataaatccttgcccttgaaaaagtcttgcaatagat |
16657940 |
T |
|
| Q |
404 |
gttgaaccttgggaatcctagtcgatccgccaacaagaacaacatcatc |
452 |
Q |
| |
|
|| || ||||||||||||| || || || ||||||||||| ||||| |
|
|
| T |
16657939 |
cctgcactttgggaatcctagatgagccacccacaagaacaacgtcatc |
16657891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 331 - 512
Target Start/End: Original strand, 12528177 - 12528358
Alignment:
| Q |
331 |
ccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatc |
430 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | | ||||| || ||||| || || ||||| || || | || ||||||||||||| ||| | |
|
|
| T |
12528177 |
ccataagcaacagcctcatcagggttgatgctcttgtataactccttgcccttgaaaaactcctgcaatagctgcttcactttgggaatcctagacgagc |
12528276 |
T |
|
| Q |
431 |
cgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacactt |
512 |
Q |
| |
|
| |||||||| |||| |||||| ||||| |||| |||||||||||||| ||||||| | ||||| | |||||||||||| |
|
|
| T |
12528277 |
caccaacaagtacaatatcatctacactactcttgtccatcttagcatcggtcaaacaactttcaacggtctccatacactt |
12528358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 336 - 451
Target Start/End: Original strand, 43744494 - 43744609
Alignment:
| Q |
336 |
agcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatccgcca |
435 |
Q |
| |
|
|||||| |||||||||||||| ||| ||||||| | |||||||| || || || ||||| |||||||| || || |||||||||| || || ||| |
|
|
| T |
43744494 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
43744593 |
T |
|
| Q |
436 |
acaagaacaacatcat |
451 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
43744594 |
acaagaacaacatcat |
43744609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 52; Significance: 2e-20; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 312 - 479
Target Start/End: Original strand, 15594688 - 15594855
Alignment:
| Q |
312 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
411 |
Q |
| |
|
|||||| ||||| || || ||||||||||||||||||||||||||||||||| | || | |||||| || | ||| ||||| | ||| |||||||| || |
|
|
| T |
15594688 |
agcagcctggacagctgcaccataagcaacagcctcatcagggttgatgctcatgcacaattcctttccctcgaaaaaatccttcaatagttgttgcact |
15594787 |
T |
|
| Q |
412 |
ttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatc |
479 |
Q |
| |
|
||||||||||||| || || ||||||| |||| ||||| ||||| |||||| |||||||||||| |
|
|
| T |
15594788 |
ttgggaatcctagaagacccaccaacaatgacaatatcatttacactactcttattcatcttagcatc |
15594855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 302 - 452
Target Start/End: Complemental strand, 4679081 - 4678931
Alignment:
| Q |
302 |
cgctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaag |
401 |
Q |
| |
|
||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| || | ||||||| || || || |||||||| || |
|
|
| T |
4679081 |
cgctcaaaatagcagcttggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatag |
4678982 |
T |
|
| Q |
402 |
ttgttgaaccttgggaatcctagtcgatccgccaacaagaacaacatcatc |
452 |
Q |
| |
|
| || || ||||||||||| | || || || ||||||||||||||||| |
|
|
| T |
4678981 |
atcctgcactttgggaatcctcgatgaaccacccacaagaacaacatcatc |
4678931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 312 - 479
Target Start/End: Complemental strand, 34467302 - 34467135
Alignment:
| Q |
312 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
411 |
Q |
| |
|
||||||||| || || ||| ||||||| ||||||||||||||||||||||| || || || ||||| |||||||| || || |||| || || || || |
|
|
| T |
34467302 |
agcagcttgcacagctgcgacataagcgacagcctcatcagggttgatgctattgcatagatccttaccattgaaaaagtcccgcaatagctgctgcact |
34467203 |
T |
|
| Q |
412 |
ttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatc |
479 |
Q |
| |
|
||||||||||||| || || || ||||| ||| |||||| ||||| || | |||||||||||||| |
|
|
| T |
34467202 |
ttgggaatcctagaagagcccccgacaaggacagcatcatgcacactactcgtgtccatcttagcatc |
34467135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 713
Target Start/End: Complemental strand, 34466991 - 34466906
Alignment:
| Q |
628 |
gtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaa |
713 |
Q |
| |
|
|||||||| || |||| || |||||||||||||| || | ||| || || |||||||||||||| || |||| |||||||||||| |
|
|
| T |
34466991 |
gtcctctttgcattctcgcacgcagttctcaacctcctcaaagctctagggtttccactaatatccttattatgcttcctcttgaa |
34466906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 331 - 449
Target Start/End: Original strand, 28219591 - 28219709
Alignment:
| Q |
331 |
ccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatc |
430 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| | ||||||||| || || || |||| |||||||| || || ||||| |||| || | |
|
|
| T |
28219591 |
ccataagcaacagcctcatcagggttaatgctcttacacaattccttccctccaaaaaattcctgcagtagttgttgtacttttggaattctagaggagc |
28219690 |
T |
|
| Q |
431 |
cgccaacaagaacaacatc |
449 |
Q |
| |
|
| ||||||||||||||||| |
|
|
| T |
28219691 |
ctccaacaagaacaacatc |
28219709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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