View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16981_low_7 (Length: 243)
Name: NF16981_low_7
Description: NF16981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16981_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 17 - 227
Target Start/End: Original strand, 31839685 - 31839895
Alignment:
| Q |
17 |
atgaaatgtcgtcgtcaatgggaccatatccatgtttgtgttgctatacaaagagtacaggatgccatcaaactggagtgccaaaatcatgtaatgcttt |
116 |
Q |
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| T |
31839685 |
atgaaatgtcgtcgtcaatggggccatatccatgtttgtgttgctatacaaagagtacaggatgccatcaaactggagtgccaaaatcatgtaatgcttt |
31839784 |
T |
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| Q |
117 |
taatgaaatgaaatctctgtttggcttctgtgagatattgttctgaaggtgtagatatcatgatcataatttgcagctttttgtgtctttctacctttta |
216 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
31839785 |
taatgaaatgaaatctctgtttggctcctgtgagatattgttctgaaggtgtagatatcatgatcataatttgcagctttttgtttctttctacctttta |
31839884 |
T |
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| Q |
217 |
tataataatat |
227 |
Q |
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| T |
31839885 |
tataataatat |
31839895 |
T |
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