View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16984_low_15 (Length: 242)
Name: NF16984_low_15
Description: NF16984
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16984_low_15 |
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Alignment Details
Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 3 - 226
Target Start/End: Original strand, 10503459 - 10503682
Alignment:
| Q |
3 |
acataaggcttagtcatgttgttgaattccaaatttccactatcactaaacttaacacaaattggtgtatcannnnnnncatgcaacctaacatgatgaa |
102 |
Q |
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| T |
10503459 |
acataaggcttagtcatgttgttgaattccaaatttccactatcactaaacttaacacaaattggtgtatcatttttttcatgcaacctaacatgatgaa |
10503558 |
T |
|
| Q |
103 |
aatgaattaaaataggatttccttgtgtgatgaccaaattcatcttctcattgtccatgaatgaatttcctgatgaagtgtaagccacaaaaccaaaaac |
202 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10503559 |
aatgaattaaaataggatttccttgcgtgatgaccaaattcatcttctcattgtccatgaatgaatttcctgatgaagtgtaagccacaaaaccaaaaac |
10503658 |
T |
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| Q |
203 |
aggtgccaccattgtgtaattagg |
226 |
Q |
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|||||||||||||||||||||||| |
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| T |
10503659 |
aggtgccaccattgtgtaattagg |
10503682 |
T |
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