View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16984_low_7 (Length: 331)
Name: NF16984_low_7
Description: NF16984
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16984_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 12 - 246
Target Start/End: Complemental strand, 47993145 - 47992912
Alignment:
| Q |
12 |
aagaatattggttaaaagctaattgcaccattgagnnnnnnnntccccagttatgatattgaatacctaggactctcgaggccgtggattaaagaaaatc |
111 |
Q |
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| T |
47993145 |
aagaatattggttaaaagctaattgcaccattgagaaaaaaa-tccccagttatgatattgaatacctaggactctcgaggccgtggattaaagaaaatc |
47993047 |
T |
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| Q |
112 |
accatcaataagaataattggttatgaagttgatatgtgtaattatcctcaatggatttaatttaactttgttttagataccaagaaaatctagctagtc |
211 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
47993046 |
accatcaataagaataattggttatgaagttgatatttgtaattatcctcaatggatttaatttaactttgttttagataccaagaaaatctagctaatc |
47992947 |
T |
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| Q |
212 |
acatcacagcaaataaaatggtgtatgaaattcgt |
246 |
Q |
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| T |
47992946 |
acatcacagcaaataaaatggtgtatgaaattcgt |
47992912 |
T |
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