View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16986_high_4 (Length: 486)
Name: NF16986_high_4
Description: NF16986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16986_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 441; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 441; E-Value: 0
Query Start/End: Original strand, 1 - 471
Target Start/End: Complemental strand, 3284140 - 3283668
Alignment:
| Q |
1 |
aattaggaacataacatt-ataatttacaatgttt-aacaacttgtcagaatctatctaaatcagacaattttgtttctcttgcttgccaattgagaagc |
98 |
Q |
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|||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
3284140 |
aattaggaacataacatttataatttacaatgttttaacaacttgtcagaatctatctaaatcagacaattttgtttctcctgcttgccaattgagaagc |
3284041 |
T |
|
| Q |
99 |
ttccaaacaagttgttttcaagttactactcaaattagggcactagtattaacacttagggtcttgctactacacctagatcttctaaaagcatatatta |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3284040 |
ttccaaacaagttgttttcaagttactactcaaattagggcactagtattaacacttagggtcttgctactacacctagatcttctaaaagcatatatta |
3283941 |
T |
|
| Q |
199 |
aaaaataaacttccaaatggtatgtttgtattgatggtataaaatgaaatgaaataggatatgtccatttttaaaatctaacaagattattctatttcac |
298 |
Q |
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|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3283940 |
aaaaataaacttccaaatggtatgttcgtattgatggtataaaatgaaatgaaataggatatgtccatttttaaaatctaacaagattattctatttcac |
3283841 |
T |
|
| Q |
299 |
ttcatttcaccatatgccaattcaaacatagccgaaaagtctagatgtagtcacgagaacatgagtgtcgataccaatactctttaaattagagctcaac |
398 |
Q |
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| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
3283840 |
tacatttcaccatatgccaattcaaacatagccgaaaagtctagatgtagtcacgagaacatgagtgtcgataccagtactctttaaattagagctcaac |
3283741 |
T |
|
| Q |
399 |
ttttcccatccccacaagcactctactctcaatgtgtatacttccgaaatcatgtgtgattttccgaggaaac |
471 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
3283740 |
ttttcccatccccacaagcactctactctcaatgtgtatacttccgaaatcatgtgtgattttccgaggaaac |
3283668 |
T |
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