View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16987_high_7 (Length: 324)
Name: NF16987_high_7
Description: NF16987
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16987_high_7 |
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Alignment Details
Target: chr5 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 2 - 309
Target Start/End: Complemental strand, 14812938 - 14812631
Alignment:
| Q |
2 |
gaaaactcatcacatcatatccaaaatcatcaataaggatgaacatttctactcattcccaatccatttgtactagcaaaaaacccaaacaactcttgcc |
101 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
14812938 |
gaaaactcatcacatcatatccaaaatcatcaataaggatgaacatttctactcattcccaatccatttgtactagcaaagaacccaaacaactcttgcc |
14812839 |
T |
|
| Q |
102 |
tatacggcaaataagatttccgtttatcattctccttcctagctttactcatcacataatgcttctcatgtgccgacggcgctggggccgcctttttccc |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14812838 |
tatacggcaaataagatttccgtttatcattctccttcctcgctttactcatcacataatgcttctcatgtgccgacggcgctggggccgcctttttccc |
14812739 |
T |
|
| Q |
202 |
tttcaccattttcactttctttacaacatcattcttcgtctcgccggcgctggaactcgttttctctaccttcgacggattcaaaaacacaaaagcgtct |
301 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
14812738 |
tttcaccattttcactttctttacaacatcattcttcgtctcgccggcgctggaactcgttttctctaccttcgacggattcaaaaacacgaaagcgtct |
14812639 |
T |
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| Q |
302 |
tttccgtc |
309 |
Q |
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|||||||| |
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| T |
14812638 |
tttccgtc |
14812631 |
T |
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