View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16987_high_8 (Length: 320)
Name: NF16987_high_8
Description: NF16987
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16987_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 37 - 296
Target Start/End: Complemental strand, 3284167 - 3283905
Alignment:
| Q |
37 |
taacatcatcaaaccattaaacaaaacaattaggaacataacatt-ataatttacaatgttt-aacaacttgtcagaatctatctaaatcagacaatttt |
134 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
3284167 |
taacatcatcaaaccattaaacacaacaattaggaacataacatttataatttacaatgttttaacaacttgtcagaatctatctaaatcagacaatttt |
3284068 |
T |
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| Q |
135 |
gtttctcttgcttgccaattgagaagcttccaaacaagttgttttcaagttactactcaaattagggcactagtattaacacttagggtctt-ctactac |
233 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
3284067 |
gtttctcctgcttgccaattgagaagcttccaaacaagttgttttcaagttactactcaaattagggcactagtattaacacttagggtcttgctactac |
3283968 |
T |
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| Q |
234 |
acctagatcttctaaaagcatatattaaaaaataaacttccaaatggtatgtttgtattgatg |
296 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
3283967 |
acctagatcttctaaaagcatatattaaaaaataaacttccaaatggtatgttcgtattgatg |
3283905 |
T |
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