View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1698_high_30 (Length: 238)
Name: NF1698_high_30
Description: NF1698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1698_high_30 |
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Alignment Details
Target: chr7 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 26971918 - 26972100
Alignment:
| Q |
18 |
tattgtctgtactacactctgtactct--tacgaaatctttagttagtaagtggaaaactgattaaatatatcagtgacaatcaataaatgtatcagctg |
115 |
Q |
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| T |
26971918 |
tattgtctgcactacactctgtactctcttacgaaatctttagttagtaagtggaaatctgattaaatatatcagtgacaatcaataaatgtatcagctg |
26972017 |
T |
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| Q |
116 |
aaaacaaggtcaacaatatgtgcagcatttcagttaatccctttctttgttcaacatttttctttagtccccgcagatctctc |
198 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |
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| T |
26972018 |
aaaacaaggtcaacaatatgtgcagcatttcagttaatccctttctttgttcaacatttttctttagtccctgcagatttctc |
26972100 |
T |
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