View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1698_high_4 (Length: 480)

Name: NF1698_high_4
Description: NF1698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1698_high_4
NF1698_high_4
[»] chr4 (22 HSPs)
chr4 (205-470)||(40806396-40806656)
chr4 (206-470)||(6333560-6333832)
chr4 (207-470)||(30193553-30193819)
chr4 (206-470)||(32136936-32137203)
chr4 (205-463)||(48996330-48996591)
chr4 (205-465)||(40899655-40899918)
chr4 (208-470)||(52344952-52345216)
chr4 (205-470)||(10218927-10219185)
chr4 (242-470)||(23937130-23937361)
chr4 (207-470)||(8176185-8176441)
chr4 (206-470)||(31301643-31301900)
chr4 (243-470)||(43630795-43631007)
chr4 (195-354)||(52345214-52345363)
chr4 (205-294)||(29639994-29640083)
chr4 (205-294)||(50570593-50570682)
chr4 (205-312)||(26477764-26477871)
chr4 (344-437)||(29639732-29639828)
chr4 (205-294)||(42558082-42558171)
chr4 (205-294)||(29643342-29643431)
chr4 (205-294)||(36078683-36078772)
chr4 (18-107)||(40806197-40806292)
chr4 (206-296)||(5261427-5261517)
[»] chr7 (27 HSPs)
chr7 (205-470)||(13852552-13852818)
chr7 (205-470)||(24360866-24361132)
chr7 (205-465)||(43429417-43429680)
chr7 (205-464)||(32823846-32824098)
chr7 (205-460)||(31876217-31876470)
chr7 (272-470)||(22366694-22366895)
chr7 (205-424)||(42910252-42910469)
chr7 (205-463)||(36921127-36921385)
chr7 (205-461)||(10069816-10070065)
chr7 (205-470)||(47903478-47903731)
chr7 (258-464)||(48675362-48675571)
chr7 (242-375)||(27054336-27054469)
chr7 (205-375)||(18672791-18672961)
chr7 (206-464)||(31982243-31982480)
chr7 (229-356)||(5932980-5933101)
chr7 (205-294)||(3211777-3211866)
chr7 (205-294)||(47070027-47070116)
chr7 (206-294)||(47204093-47204181)
chr7 (205-294)||(10672178-10672267)
chr7 (205-275)||(11206013-11206083)
chr7 (205-294)||(12117959-12118048)
chr7 (205-277)||(8768301-8768373)
chr7 (380-472)||(36508932-36509024)
chr7 (399-470)||(18672962-18673033)
chr7 (410-470)||(5932888-5932948)
chr7 (279-339)||(36509024-36509084)
chr7 (428-465)||(27054549-27054586)
[»] chr1 (19 HSPs)
chr1 (205-470)||(33474685-33474953)
chr1 (201-470)||(33910343-33910615)
chr1 (201-470)||(39256202-39256474)
chr1 (205-470)||(24910624-24910892)
chr1 (201-470)||(45692040-45692307)
chr1 (244-470)||(16529101-16529330)
chr1 (195-470)||(32954323-32954596)
chr1 (206-470)||(1160605-1160856)
chr1 (205-470)||(51252001-51252259)
chr1 (283-465)||(44918790-44918975)
chr1 (235-375)||(11899381-11899521)
chr1 (309-465)||(29389281-29389440)
chr1 (201-347)||(6722389-6722529)
chr1 (195-294)||(5154958-5155057)
chr1 (195-294)||(8211639-8211738)
chr1 (195-294)||(20494094-20494193)
chr1 (205-294)||(29707717-29707801)
chr1 (205-259)||(29390137-29390191)
chr1 (428-465)||(11899264-11899301)
[»] chr6 (11 HSPs)
chr6 (235-470)||(13801578-13801816)
chr6 (210-463)||(33550574-33550830)
chr6 (205-470)||(35039509-35039777)
chr6 (205-470)||(25137388-25137655)
chr6 (195-470)||(15859972-15860249)
chr6 (205-464)||(10591099-10591350)
chr6 (207-463)||(10390613-10390858)
chr6 (205-294)||(12270905-12270994)
chr6 (205-294)||(5866653-5866742)
chr6 (201-321)||(10493958-10494078)
chr6 (397-436)||(10494223-10494262)
[»] chr2 (16 HSPs)
chr2 (205-471)||(25297827-25298096)
chr2 (195-470)||(44035553-44035831)
chr2 (206-470)||(11376130-11376392)
chr2 (229-470)||(17916453-17916699)
chr2 (205-470)||(44979346-44979614)
chr2 (206-470)||(19936697-19936959)
chr2 (229-470)||(34910552-34910792)
chr2 (207-399)||(18360115-18360310)
chr2 (344-470)||(20420443-20420572)
chr2 (205-294)||(9811739-9811828)
chr2 (205-294)||(20420777-20420866)
chr2 (205-277)||(16579006-16579078)
chr2 (205-294)||(36412932-36413021)
chr2 (195-295)||(42785091-42785191)
chr2 (395-470)||(18357514-18357589)
chr2 (220-289)||(44085956-44086025)
[»] chr5 (30 HSPs)
chr5 (205-470)||(12680646-12680914)
chr5 (205-464)||(2226454-2226716)
chr5 (205-461)||(12165514-12165773)
chr5 (206-470)||(36103183-36103450)
chr5 (206-470)||(9161226-9161491)
chr5 (205-470)||(32520796-32521059)
chr5 (195-470)||(332842-333122)
chr5 (234-465)||(30265393-30265626)
chr5 (201-462)||(38433937-38434201)
chr5 (205-464)||(10174322-10174566)
chr5 (205-465)||(36176691-36176934)
chr5 (298-461)||(35893238-35893405)
chr5 (286-465)||(42544902-42545086)
chr5 (246-470)||(23780977-23781182)
chr5 (246-470)||(23867930-23868135)
chr5 (205-357)||(36176460-36176612)
chr5 (331-464)||(9988586-9988722)
chr5 (374-470)||(38334707-38334803)
chr5 (202-294)||(701566-701658)
chr5 (279-462)||(17084520-17084706)
chr5 (205-294)||(666903-666992)
chr5 (205-294)||(27885718-27885807)
chr5 (205-294)||(8409335-8409424)
chr5 (205-294)||(11917804-11917893)
chr5 (205-294)||(38334386-38334475)
chr5 (205-294)||(15068825-15068914)
chr5 (205-294)||(30002347-30002436)
chr5 (206-276)||(42545822-42545892)
chr5 (428-470)||(35893205-35893247)
chr5 (222-289)||(691159-691226)
[»] chr3 (17 HSPs)
chr3 (205-465)||(6003964-6004227)
chr3 (208-465)||(35531736-35531991)
chr3 (201-470)||(21586419-21586685)
chr3 (195-470)||(50562152-50562420)
chr3 (266-470)||(33002761-33002968)
chr3 (195-463)||(32880547-32880823)
chr3 (282-465)||(39098187-39098373)
chr3 (234-470)||(43030671-43030895)
chr3 (205-329)||(48032712-48032836)
chr3 (336-470)||(27641870-27642007)
chr3 (205-294)||(10369610-10369699)
chr3 (196-294)||(34794923-34795021)
chr3 (205-294)||(35401805-35401894)
chr3 (205-294)||(51149303-51149392)
chr3 (205-294)||(4669228-4669317)
chr3 (205-294)||(33361312-33361401)
chr3 (206-277)||(27641794-27641865)
[»] chr8 (15 HSPs)
chr8 (207-470)||(36827365-36827631)
chr8 (205-470)||(30392324-30392591)
chr8 (205-463)||(14549478-14549735)
chr8 (206-470)||(10661392-10661658)
chr8 (199-470)||(18169596-18169865)
chr8 (199-470)||(18633162-18633431)
chr8 (234-462)||(33068844-33069075)
chr8 (205-464)||(3682169-3682425)
chr8 (209-464)||(36909923-36910165)
chr8 (205-369)||(44673068-44673236)
chr8 (205-376)||(6200507-6200678)
chr8 (206-277)||(5802528-5802599)
chr8 (234-285)||(3006232-3006283)
chr8 (201-304)||(42496467-42496565)
chr8 (412-462)||(44673023-44673073)
[»] scaffold0059 (2 HSPs)
scaffold0059 (205-470)||(69106-69374)
scaffold0059 (205-375)||(77212-77382)
[»] scaffold0013 (2 HSPs)
scaffold0013 (205-470)||(106278-106547)
scaffold0013 (267-470)||(128885-129092)
[»] scaffold0029 (2 HSPs)
scaffold0029 (205-470)||(40145-40413)
scaffold0029 (205-442)||(47341-47581)
[»] scaffold0308 (1 HSPs)
scaffold0308 (207-294)||(5490-5577)


Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 205 - 470
Target Start/End: Original strand, 40806396 - 40806656
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    |||||||||||||| |||||||||||||| |     ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  40806396 ggatgacttttacactgaaccgcacggtttg-----atttgcggtttgcatctcagcaactgaaccaaaccaaaccaaaccgcaagaataatgaatatta 40806490  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgcatcaggttcgattctaattcctttccatct 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  40806491 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcgattttttcattgttgcaacaggttcgattctaattcctttccatct 40806590  T
Q  405 ctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||    
T  40806591 ctttcaattcatttccaatgataaatttgtttcctttactttccaataatttgtttcatgcttatg 40806656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 206 - 470
Target Start/End: Complemental strand, 6333832 - 6333560
Alignment:
Q  206 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagcc-----aaaccgcaagaataatgaat 300  Q
    ||||||||||||| |||||||| || ||||||||||||||||| |||||||| |||||| |||||||||||| ||     ||||||||||||||||||||    
T  6333832 gatgacttttacactgaaccgcgcgattcggttcgatttgcggcttgcatcttagcaaccgaaccaaaccaaaccaaactaaaccgcaagaataatgaat 6333733  T
Q  301 attacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctt 397  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||   ||||||||||||||||||||| ||    
T  6333732 attacttaaatatgtactagcccaattacatagctcaagaataatctcttttgattcaatttttccatcgttgcaccatcaggttcgattctaattcatt 6333633  T
Q  398 tccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  6333632 tccatctctttcaattcatttccagtgatgaatttgtttcctttacttcccaataatttgtttcatgcttatg 6333560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 207 - 470
Target Start/End: Original strand, 30193553 - 30193819
Alignment:
Q  207 atgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattact 306  Q
    ||||||||| ||||||||||  |||||||||||  ||||| ||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  30193553 atgacttttgcaatgaaccgtgcggttcggttcagtttgcagtttgcatctcagcaaccgaaccaaaccaaaccataccgcaagaataatgaatattact 30193652  T
Q  307 taaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatc 403  Q
    |||||||||| || | ||||||||||||||||||||||| ||||||||||| |||||| ||||||||   |||||||||||||| |||||||||||||||    
T  30193653 taaatatgtattatcccaattacatagctcaagaataatttcttttgattcgatttttccattgttgcaccatcaggttcgattttaattcctttccatc 30193752  T
Q  404 tctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  30193753 tctttcaattcatttacagtgatgaatttgtttcctttacttcccaataatttgtttcatgcttatg 30193819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 206 - 470
Target Start/End: Complemental strand, 32137203 - 32136936
Alignment:
Q  206 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattac 305  Q
    |||||||||| ||||||||||  |||||||||| | ||||||||||||||||||||||| |||||||| ||| ||||||| ||||||| |||||||||||    
T  32137203 gatgacttttgcaatgaaccgtgcggttcggtttggtttgcggtttgcatctcagcaaccgaaccaaatcaaaccaaaccacaagaatgatgaatattac 32137104  T
Q  306 ttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccat 402  Q
    ||||| |||||||||| ||||||||||||| ||||||||| |||||| |||| |||||||||||||||   |||||||||||||| ||||||||||||||    
T  32137103 ttaaacatgtactagcccaattacatagcttaagaataatttctttttattcgattttttcattgttgcaccatcaggttcgattttaattcctttccat 32137004  T
Q  403 ctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||| ||||    
T  32137003 ctctttcaattcatttcaagtgatgaatttgtttcctttacttcccaatcatttgtttcatgcttatg 32136936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 205 - 463
Target Start/End: Complemental strand, 48996591 - 48996330
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  48996591 ggatgacttttgcaatgaaccgcgcggttcggtttgatttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaatatta 48996492  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 401  Q
    |||||| ||||||||||  |||||||||||  ||||||||||||||||||||| |||||||||||||||   |||||  |||||||||||||||||||||    
T  48996491 cttaaacatgtactagcctaattacatagcctaagaataatctcttttgattcgattttttcattgttgcaccatcaaattcgattctaattcctttcca 48996392  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcat 463  Q
     ||||||||||| |||| ||||||| |||||||||| ||| |||  ||||||||||||||||    
T  48996391 cctctttcaatttattttcagtgataaatttgtttcattttcttctcaataatttgtttcat 48996330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 205 - 465
Target Start/End: Original strand, 40899655 - 40899918
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| |  |||||||| ||||| |||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||    
T  40899655 ggatgacttttgcgctgaaccgcgcggtttggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaatgtta 40899754  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 401  Q
    |||||| ||||| |||| |||||||||||| |||| ||||||||||||||||| |||||| ||||||||   |||||  ||| |||||||||||||||||    
T  40899755 cttaaacatgtaatagcccaattacatagcccaaggataatctcttttgattcgatttttccattgttgcaccatcaaattcaattctaattcctttcca 40899854  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgc 465  Q
    ||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||    
T  40899855 tctctttaaattcatttccagtgatgaatttatttcctttacttaccaataatttgattcatgc 40899918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 208 - 470
Target Start/End: Complemental strand, 52345216 - 52344952
Alignment:
Q  208 tgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattactt 307  Q
    |||||||| || ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  52345216 tgacttttgcactgaaccgcacggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaatattactt 52345117  T
Q  308 aaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg--catcaggttcgattctaattcctttccatctc 405  Q
    ||| |||||||||  | ||| ||||||||||||||| || |||||||||  |||||| |||| |||  |||||||||||||||||| |  |||||| |||    
T  52345116 aaacatgtactagtccgattgcatagctcaagaatagtcgcttttgatttgatttttccattattgcacatcaggttcgattctaacttatttccaactc 52345017  T
Q  406 tttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    ||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  52345016 tttcaattcatattcactgatgaatttgtttcctttactttccaataatttgtttcatgcttatg 52344952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 205 - 470
Target Start/End: Complemental strand, 10219185 - 10218927
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    |||||||||||||| |||||||| |||||||||| | ||||||||||||||||||      | ||||||||||     ||||||||||||||||||||||    
T  10219185 ggatgacttttacactgaaccgcgcggttcggtttggtttgcggtttgcatctcaa-----gtaccaaaccaa-----accgcaagaataatgaatatta 10219096  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 401  Q
    |||||| |||||||||| |||||||||||||||||||||||||| |||||||  |||||| ||||||||   |||| |||||||||||||||||||||||    
T  10219095 cttaaacatgtactagcccaattacatagctcaagaataatctcatttgattagatttttccattgttgcaccatctggttcgattctaattcctttcca 10218996  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    ||||||||||||||||| |||||||||||||||||| |||||||  |||||||||||||||||| ||||    
T  10218995 tctctttcaattcattttcagtgatgaatttgtttcttttacttctcaataatttgtttcatgcttatg 10218927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 242 - 470
Target Start/End: Original strand, 23937130 - 23937361
Alignment:
Q  242 tttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaa 341  Q
    |||| ||||||||||||| ||||||||||||||||| | |||||||||||||||| ||||||||||||| || ||||||  |||||||||| ||||||||    
T  23937130 tttgtggtttgcatctcaacaactgaaccaaaccaaactaaaccgcaagaataataaatattacttaaacatatactagtccaattacataactcaagaa 23937229  T
Q  342 taatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcc 438  Q
    |||||||||| ||||  |||||| ||||||||   ||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  23937230 taatctctttagatttgatttttccattgttgcaccatcatgttctattctaattcctttccatctctttcaattcatttctagtgatgaatttgtttca 23937329  T
Q  439 tttactttccaataatttgtttcatgcctatg 470  Q
    |||| || ||||||||||||||||||| ||||    
T  23937330 tttatttcccaataatttgtttcatgcttatg 23937361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 207 - 470
Target Start/End: Original strand, 8176185 - 8176441
Alignment:
Q  207 atgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattact 306  Q
    ||||||||| || ||||||||   ||||||||||||||||||||||||||||||||||          ||| ||||||||||||||||||||| ||||||    
T  8176185 atgacttttgcactgaaccgcgtcgttcggttcgatttgcggtttgcatctcagcaac----------caaaccaaaccgcaagaataatgaagattact 8176274  T
Q  307 taaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatc 403  Q
    |||| |||||||||| |||||||||||| ||| |||||||||||||||||| |||||| ||||||||   ||||||||||||| ||||||||||||||||    
T  8176275 taaacatgtactagcccaattacatagcccaaaaataatctcttttgattcgatttttccattgttgcaccatcaggttcgatcctaattcctttccatc 8176374  T
Q  404 tctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    ||||| ||||||||| |||| |||||||| |||| ||| ||| ||||||||||||||||||| ||||    
T  8176375 tcttttaattcattttcagttatgaatttttttctttttcttcccaataatttgtttcatgcttatg 8176441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 206 - 470
Target Start/End: Complemental strand, 31301900 - 31301643
Alignment:
Q  206 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattac 305  Q
    |||||||||| || |||||| || ||||| ||||| ||||||||||||||||||||||| ||||||||||          ||||||||||| ||||||||    
T  31301900 gatgactttt-cactgaaccacatggttcagttcggtttgcggtttgcatctcagcaaccgaaccaaacc----------gcaagaataatcaatattac 31301812  T
Q  306 ttaaatatgtactagctcaattacatagctcaagaataatctcttttg-attcaattttttcattgttgca---tcaggttcgattctaattcctttcca 401  Q
    |||||  |||| |||| |||||||||| |||||||||||| | ||||  |||| | |||||||||||||||   |||| |||||||||||||| ||||||    
T  31301811 ttaaacttgtattagcccaattacataactcaagaataattttttttttattcgactttttcattgttgcaccatcagtttcgattctaattcatttcca 31301712  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  31301711 tctccttcaattcatttccagtgatgaatttgtttccttttctttccaataatttgtttcatgcttatg 31301643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 243 - 470
Target Start/End: Complemental strand, 43631007 - 43630795
Alignment:
Q  243 ttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaat 342  Q
    ||||||||  |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||| |||| ||| ||||||||||||||||    
T  43631007 ttgcggttgacatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaatattacttaaaaatgtaatagcccaactacatagctcaagaat 43630908  T
Q  343 aatctcttttgattcaattttttcattgttgcatcag---gttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcct 439  Q
                      ||||||||||||||| ||    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  43630907 ------------------tttttcattgttgcaccattaagttcgattctaattcctttccatctctttcaattcatttgcagtgatgaatttgtttcct 43630826  T
Q  440 ttactttccaataatttgtttcatgcctatg 470  Q
    |||||| ||||||||||||||||||| ||||    
T  43630825 ttacttcccaataatttgtttcatgcttatg 43630795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 195 - 354
Target Start/End: Complemental strand, 52345363 - 52345214
Alignment:
Q  195 cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||| || |||||||||||  | |||| |||| ||||||||||| |||| |||||||||||||||||| ||||||||||          |||||||||    
T  52345363 cacttggttcggatgacttttgtactgaatcgcatggttcggttcggtttgtggtttgcatctcagcaaccgaaccaaacc----------gcaagaata 52345274  T
Q  295 atgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttga 354  Q
    |||||||||||||||| |||||||||| ||||| ||||||||||||||| || |||||||    
T  52345273 atgaatattacttaaacatgtactagcccaattgcatagctcaagaatagtcgcttttga 52345214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 294
Target Start/End: Complemental strand, 29640083 - 29639994
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  29640083 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 29639994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 294
Target Start/End: Original strand, 50570593 - 50570682
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  50570593 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 50570682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 205 - 312
Target Start/End: Original strand, 26477764 - 26477871
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    |||||||||||  | | |||||  |||||||||| | ||||||||||||||||||||||| |||||||||||| |||| || ||||||||||||||||||    
T  26477764 ggatgacttttgtactaaaccgtgcggttcggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaatccacaagaataatgaatatta 26477863  T
Q  305 cttaaata 312  Q
    ||||||||    
T  26477864 cttaaata 26477871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 344 - 437
Target Start/End: Complemental strand, 29639828 - 29639732
Alignment:
Q  344 atctcttttgattcaattttttcattgttgcatca---ggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttc 437  Q
    ||||| ||| |||| |||||| |||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  29639828 atctcctttaattcgatttttccattgttgcatcatcaggttcgattctaattcctttccatctccttcaattcatttccaatgatgaatttgtttc 29639732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 205 - 294
Target Start/End: Complemental strand, 42558171 - 42558082
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||||||||| | |||||||  |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  42558171 ggatgacttttagactgaaccgtgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 42558082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 205 - 294
Target Start/End: Original strand, 29643342 - 29643431
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||||||||| | |||||||| |||||||||||| |||| || ||||||||||||||| |||||||||||| ||||||||||| ||||    
T  29643342 ggatgacttttaaactgaaccgcgcggttcggttcggtttgtggcttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 29643431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 205 - 294
Target Start/End: Complemental strand, 36078772 - 36078683
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||||||||| | |||||||| |||||||||||  ||||| ||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  36078772 ggatgacttttagactgaaccgcgcggttcggttcagtttgcagtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 36078683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 40806197 - 40806292
Alignment:
Q  18 gtataagtaccatacacatatccaataccgatat------gcatgtgacacggatacttcaccattttaaaaattcgcatgcttaagagttttcat 107  Q
    ||||||||||||||||||||||| ||||||||||      | ||||||||||||||||| |||||||||||| ||| |||||||||||||||||||    
T  40806197 gtataagtaccatacacatatccgataccgatatatatgtgtatgtgacacggatactttaccattttaaaagttcacatgcttaagagttttcat 40806292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 206 - 296
Target Start/End: Original strand, 5261427 - 5261517
Alignment:
Q  206 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataat 296  Q
    |||||||||| || |||||||| |||||||||||| ||||||||||||||||||| ||  |||||||| ||| |||||| |||||||||||    
T  5261427 gatgacttttgcactgaaccgcgcggttcggttcggtttgcggtttgcatctcagaaatcgaaccaaatcaaaccaaactgcaagaataat 5261517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 205 - 470
Target Start/End: Complemental strand, 13852818 - 13852552
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| || |||||||   ||||||||||  |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  13852818 ggatgacttttgcactgaaccgagtggttcggttctgtttgcggtttgcatctcagcaactgaaccaaaccaaaccaaactgcaagaataatgaatatta 13852719  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgtt-gcatcaggttcgattctaattcctttccatc 403  Q
     |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||| |||||||||||||||    
T  13852718 tttaaatatgtactaactcaattacatagctcaagaataatctcttttgattcgattttttcattgttaccatcaggttcgattataattcctttccatc 13852619  T
Q  404 tctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13852618 tctttcaattcatttacagtgatgaatttgtttcctttactttccaataatttgtttcatgcttatg 13852552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 205 - 470
Target Start/End: Original strand, 24360866 - 24361132
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| ||  ||||| ||| |||||||||| ||  |||||||| |||||||||| |||||||||||| |||||||||||||||||||| |||||    
T  24360866 ggatgacttttgcacagaaccacacagttcggttcggtt--cggtttgcgtctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgactatta 24360963  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 401  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||   ||||| |||| |||||||||||||||||    
T  24360964 cttaaatatgtactagcccaattacatagctcaagaataatcccttttgattcgattttttcattgttgcaccatcaagttcaattctaattcctttcca 24361063  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  24361064 tttctttcaattcatttccagtgatgaatttgtttcctttacttcccaataatttgtttcatgcttatg 24361132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 205 - 465
Target Start/End: Complemental strand, 43429680 - 43429417
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| || | ||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||    
T  43429680 ggatgacttttgcactaaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgactatta 43429581  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 401  Q
    ||||||  |||||| |  ||||||||||||||||||| ||||||||||||||| |||||| ||||||||   |||||||||| |||||||||||||||||    
T  43429580 cttaaacgtgtactcgtccaattacatagctcaagaaaaatctcttttgattcgatttttccattgttgcaccatcaggttcaattctaattcctttcca 43429481  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgc 465  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  43429480 tctctttcgattcatttccaatgatgaatttgtttcctttactttccaataattagtttcatgc 43429417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 205 - 464
Target Start/End: Complemental strand, 32824098 - 32823846
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||| ||||| || ||||||||||||||||||||| |||||||||||||||||||||||          ||| |||||||||| |||||||||||||||    
T  32824098 ggatggcttttgcactgaaccgcacggttcggttcggtttgcggtttgcatctcagcaac----------caaaccaaaccgcatgaataatgaatatta 32824009  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 401  Q
    |||||| |||||||||| |||||||||||||||||||||||||| |||||||| |||||| ||||||||   ||||||||||||||||||||||||||||    
T  32824008 cttaaacatgtactagcccaattacatagctcaagaataatctcctttgattcgatttttccattgttgcaccatcaggttcgattctaattcctttcca 32823909  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatg 464  Q
    ||| ||||||||||||  || ||||||||||||||| ||||||||||||||||||| ||||||    
T  32823908 tctatttcaattcattctcactgatgaatttgtttcatttactttccaataatttgcttcatg 32823846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 205 - 460
Target Start/End: Original strand, 31876217 - 31876470
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| ||||||||||  ||||||| || | |||||||||||||||||||||||     |||||||| ||||||||||| ||||||||||||||    
T  31876217 ggatgacttttgcaatgaaccgtgcggttcgatttggtttgcggtttgcatctcagcaac-----caaaccaaaccaaaccgcaaaaataatgaatatta 31876311  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 401  Q
    |||||| |||||||||| || ||||||||||||||||||||||||||| |||| |||||| ||||||||   |||||| |||||||||||||| ||||||    
T  31876312 cttaaacatgtactagcccagttacatagctcaagaataatctcttttaattcgatttttccattgttgcaccatcagattcgattctaattcttttcca 31876411  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgttt 460  Q
    ||||||| ||||||||||||||||||| |||||||||||||||| | ||||||||||||    
T  31876412 tctcttttaattcatttccagtgatgactttgtttcctttacttccaaataatttgttt 31876470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 272 - 470
Target Start/End: Complemental strand, 22366895 - 22366694
Alignment:
Q  272 aaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgt 371  Q
    |||||| |||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||  ||||  ||||| ||||||    
T  22366895 aaccaaaccaaaccgcaagaataatgaatattactcaaacatgtactagcccaattacatagctcaagaataatctctttcaattcggtttttccattgt 22366796  T
Q  372 tgca---tcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgccta 468  Q
    ||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  22366795 tgcaccatcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttacttcccaataatttgtttcatgctta 22366696  T
Q  469 tg 470  Q
    ||    
T  22366695 tg 22366694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 205 - 424
Target Start/End: Original strand, 42910252 - 42910469
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| || |||||||  |||||||||||| ||||||||||||||||||||||| ||||||||||||     ||||||||||||||||||||||    
T  42910252 ggatgacttttgcactgaaccgtgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaa-----accgcaagaataatgaatatta 42910346  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 401  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||  |||||| ||||||||   |||||||| |||||||||||||||||||    
T  42910347 cttaaacatgtactagcccaattacatagctcaagaataatctcttttgatttgatttttccattgttgcaccatcaggtccgattctaattcctttcca 42910446  T
Q  402 tctctttcaattcatttccagtg 424  Q
    |||||||||||||||||||||||    
T  42910447 tctctttcaattcatttccagtg 42910469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 205 - 463
Target Start/End: Original strand, 36921127 - 36921385
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    |||| |||||| || |||||| | |||||||||| | ||||| ||||||||||||||||| ||||||||||||     ||||||||||||||||||||||    
T  36921127 ggattacttttgcattgaaccacgcggttcggtttggtttgcagtttgcatctcagcaaccgaaccaaaccaa-----accgcaagaataatgaatatta 36921221  T
Q  305 cttaaatatgtactagctc--aattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttc 399  Q
    |||||| |||||||| | |  ||||||||||||||||||||||| |||||||||| |||||||||||||||||   ||||||||||||||||||| ||||    
T  36921222 cttaaacatgtactaacccccaattacatagctcaagaataatcgcttttgattcgattttttcattgttgcaccatcaggttcgattctaattcttttc 36921321  T
Q  400 catctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcat 463  Q
    ||||||||||||||||||| || |||| |||||||||| ||||||| |||||||||||||||||    
T  36921322 catctctttcaattcattttcaatgataaatttgtttcttttacttcccaataatttgtttcat 36921385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 205 - 461
Target Start/End: Complemental strand, 10070065 - 10069816
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| || |||||||||| |||| ||||| |||||| ||||||||||||||||          ||| |||||||||||||||||| |||||||    
T  10070065 ggatgacttttgcactgaaccgcacagttcagttcggtttgcgatttgcatctcagcaac----------caaaccaaaccgcaagaataatcaatatta 10069976  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttcca 401  Q
    ||||||  |||||  || |||||||||||| |||||||||||| ||||||||  |||||| ||||||||||   ||||||| ||||||||||||||||||    
T  10069975 cttaaacttgtaccggcccaattacatagcccaagaataatcttttttgatttgatttttccattgttgcaccatcaggtttgattctaattcctttcca 10069876  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttc 461  Q
    |||| ||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||    
T  10069875 tctccttcaattcatttccaatgatgaatttgtttccttttcttcccaataatttgtttc 10069816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 205 - 470
Target Start/End: Complemental strand, 47903731 - 47903478
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| || |||||||| | ||||| |||| ||||||||||||||||||||||| |||||||| ||| ||||||| |||||||||||||||       
T  47903731 ggatgacttttgcactgaaccgcgcagttcgtttcggtttgcggtttgcatctcagcaaccgaaccaaaacaacccaaaccacaagaataatgaata--- 47903635  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttcca 401  Q
                |||||  |||||||||||||||||||| | | ||| ||||| |||||||||||||||||   |||||||||||| |||||| ||||||    
T  47903634 ------------ctagccaaattacatagctcaagaatactatttttcgattcgattttttcattgttgcaccatcaggttcgattataattcatttcca 47903547  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    | ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  47903546 tatctttcaattcatttccagtgatgaatttgtttcctttatttcccaataatttgtttcatgcttatg 47903478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 258 - 464
Target Start/End: Complemental strand, 48675571 - 48675362
Alignment:
Q  258 cagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattc 357  Q
    ||||||||||||||||| ||  ||||||| ||||||||| ||||||||||||| ||||| ||||  |||||||||||| || ||||| |||||||| ||     
T  48675571 cagcaactgaaccaaacaaaatcaaaccgtaagaataataaatattacttaaacatgtattagcctaattacatagctaaaaaataacctcttttggttt 48675472  T
Q  358 aattttttcattgttgca---tcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataat 454  Q
     ||| || ||||||||||   ||||||| ||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||| | ||||||    
T  48675471 gattattccattgttgcaccatcaggtttgattctaattcatttccatctctttgaattcattttcagtgatgaatttgtttcctttacttcctaataat 48675372  T
Q  455 ttgtttcatg 464  Q
    ||||||||||    
T  48675371 ttgtttcatg 48675362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 242 - 375
Target Start/End: Original strand, 27054336 - 27054469
Alignment:
Q  242 tttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaa 341  Q
    |||||||||||||| |||||||  |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  27054336 tttgcggtttgcatatcagcaatcgaaccaaaccaaaccaaaccacaagaataatgaatattacttaaatatgtactagcccaattacataactcaagaa 27054435  T
Q  342 taatctcttttgattcaattttttcattgttgca 375  Q
    |||||||||||||||| |||||||||||||||||    
T  27054436 taatctcttttgattcgattttttcattgttgca 27054469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 205 - 375
Target Start/End: Original strand, 18672791 - 18672961
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    |||||| |||| || || ||||| | |||||||||| |||| |||||||||||||||||| |||||||||||| ||||||||||| |||||| |||||||    
T  18672791 ggatgatttttgcattggaccgcgcagttcggttcggtttgtggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaataataatcaatatta 18672890  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca 375  Q
    ||||||  ||||||||| |||||||||||| || ||||||||||||||||||  ||||||  |||||||||    
T  18672891 cttaaacttgtactagcccaattacatagcacaggaataatctcttttgattagatttttctattgttgca 18672961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 206 - 464
Target Start/End: Original strand, 31982243 - 31982480
Alignment:
Q  206 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattac 305  Q
    |||||||||| || ||||| || ||||| |||| |||||||||||||||||| ||||||          ||| ||||||||||| |||||| ||||||||    
T  31982243 gatgacttttgcactgaactgcgcggtttggtttgatttgcggtttgcatcttagcaac----------caaaccaaaccgcaaaaataatcaatattac 31982332  T
Q  306 ttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccat 402  Q
    |||||| ||||| ||| |||||||||||| |||||||||||||||||||||  |||||| ||||||||   |||||  |||||||||||||||||         
T  31982333 ttaaatttgtaccagcccaattacatagcccaagaataatctcttttgatttgatttttccattgttgcaccatcaaattcgattctaattcctt----- 31982427  T
Q  403 ctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatg 464  Q
             ||||||| |||||||||||||||||||||| ||| ||||||||||||||||||    
T  31982428 ---------ttcattttcagtgatgaatttgtttccttttcttcccaataatttgtttcatg 31982480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 229 - 356
Target Start/End: Complemental strand, 5933101 - 5932980
Alignment:
Q  229 cggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaatta 328  Q
    |||||||||||| ||||||||||| ||||||||||| |||||||||||| ||||| || ||||||||||      ||||||| |||||||||| ||||||    
T  5933101 cggttcggttcggtttgcggtttgtatctcagcaaccgaaccaaaccaaaccaaatcgtaagaataatg------acttaaacatgtactagcccaatta 5933008  T
Q  329 catagctcaagaataatctcttttgatt 356  Q
    ||||||||||||||||||||||| ||||    
T  5933007 catagctcaagaataatctctttcgatt 5932980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 294
Target Start/End: Original strand, 3211777 - 3211866
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  3211777 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 3211866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 294
Target Start/End: Complemental strand, 47070116 - 47070027
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  47070116 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 47070027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 206 - 294
Target Start/End: Original strand, 47204093 - 47204181
Alignment:
Q  206 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    ||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  47204093 gatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 47204181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 205 - 294
Target Start/End: Complemental strand, 10672267 - 10672178
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||||||||| | |||||||  |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  10672267 ggatgacttttagactgaaccgtgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 10672178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 205 - 275
Target Start/End: Original strand, 11206013 - 11206083
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaacc 275  Q
    |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||    
T  11206013 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaacc 11206083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 205 - 294
Target Start/End: Complemental strand, 12118048 - 12117959
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||||||||| | |||||||| |||||||||||| |||||| ||||||||||||||||  ||||||||||| | ||||||||| ||||    
T  12118048 ggatgacttttagactgaaccgcgcggttcggttcggtttgcgatttgcatctcagcaaccaaaccaaaccaaactaaaccgcaaaaata 12117959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 205 - 277
Target Start/End: Original strand, 8768301 - 8768373
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaa 277  Q
    |||||||||||| | |||||||| |||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  8768301 ggatgacttttagactgaaccgcgcggttcggttcggtttgtggtttgcatctcagcaaccgaaccaaaccaa 8768373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 380 - 472
Target Start/End: Complemental strand, 36509024 - 36508932
Alignment:
Q  380 gttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatgct 472  Q
    ||||||||||| || ||||||||||| ||||||| |||| | |||||||||||||||||||| ||  |||||||||||||||| || ||||||    
T  36509024 gttcgattctatttgctttccatctccttcaattaattttcggtgatgaatttgtttccttttctccccaataatttgtttcaggcttatgct 36508932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 399 - 470
Target Start/End: Original strand, 18672962 - 18673033
Alignment:
Q  399 ccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||| | ||||||||||||||||| ||||    
T  18672962 ccatctccttcaattcatttccattgatgaatttgtttccttttcttccaaataatttgtttcatgcttatg 18673033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 410 - 470
Target Start/End: Complemental strand, 5932948 - 5932888
Alignment:
Q  410 aattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||| |||| ||| ||||    
T  5932948 aattcattttcagtgatgaatttgtttcctttactttctaataatttatttcttgcttatg 5932888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 36509084 - 36509024
Alignment:
Q  279 ccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaag 339  Q
    |||||||||||||||||| |||||||||||||| ||||| ||| |||||||||||| ||||    
T  36509084 ccaaaccgcaagaataatcaatattacttaaatttgtacgagcccaattacatagcccaag 36509024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 428 - 465
Target Start/End: Original strand, 27054549 - 27054586
Alignment:
Q  428 aatttgtttcctttactttccaataatttgtttcatgc 465  Q
    |||||||||||||||||| |||||||||||||||||||    
T  27054549 aatttgtttcctttacttcccaataatttgtttcatgc 27054586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 205 - 470
Target Start/End: Complemental strand, 33474953 - 33474685
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| || |||||||| |||||||||||| |||| | ||||||||||| |||| |||||||||||| |||||| |||||||||| ||||||||    
T  33474953 ggatgacttttgcactgaaccgcgcggttcggttcggtttgtgatttgcatctcatcaaccgaaccaaaccaaaccaaactgcaagaataacgaatatta 33474854  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 401  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||   ||||||||||||||||||||||||||||    
T  33474853 cttaaatatgtactagcccaattacatagctcaagaataatctcttttgatttgattttttcattgttgcgtcatcaggttcgattctaattcctttcca 33474754  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||    
T  33474753 tctctttcaattcatttccagtgatgaatttgtttcctttacatcccaataatttgtttcatgcttatg 33474685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 201 - 470
Target Start/End: Original strand, 33910343 - 33910615
Alignment:
Q  201 atttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaat 300  Q
    ||||||||||||||| || |||||||| |||||||||| | ||||||||||||||||||| ||   ||||||||||| ||||||||||||||||||||||    
T  33910343 atttggatgacttttgcactgaaccgcgcggttcggtttggtttgcggtttgcatctcagtaatcaaaccaaaccaaaccaaaccgcaagaataatgaat 33910442  T
Q  301 attacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctt 397  Q
    ||||||||||||||||||||| |||||||||| || ||||||||||||||||||||| |||||| || |||||   ||||||||||||||||||||| ||    
T  33910443 attacttaaatatgtactagcccaattacataacttaagaataatctcttttgattcgatttttccaatgttgcaccatcaggttcgattctaattcttt 33910542  T
Q  398 tccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  33910543 tccatctctttcaattcatttcaagtgatgaatttgtttcctttacttcccaataatttgtttcatgcttatg 33910615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 201 - 470
Target Start/End: Original strand, 39256202 - 39256474
Alignment:
Q  201 atttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaat 300  Q
    ||||||||||||||| || ||||| || ||||| |||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  39256202 atttggatgacttttgcactgaactgcgcggtttggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaat 39256301  T
Q  301 attacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctt 397  Q
    |||||||||| ||||||||||  |||||||||||||| ||||||||| ||| ||||| |||||| ||||||||   ||||||||||||||||||||||||    
T  39256302 attacttaaacatgtactagccaaattacatagctcacgaataatctttttcgattcgatttttccattgttgcaccatcaggttcgattctaattcctt 39256401  T
Q  398 tccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    |||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||| ||||    
T  39256402 tccatctctttcaattcatttccaatgatgaatttgtttcctttatttcccaataatttgtttcatgcttatg 39256474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 205 - 470
Target Start/End: Original strand, 24910624 - 24910892
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| || |||||||  | |||||||||  |||| |||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||    
T  24910624 ggatgacttttgcattgaaccgtgcagttcggttcagtttgtggtttgcatctcagcaaccgaaccaaaccaaaccaaaccggaagaataatgaatatta 24910723  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 401  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||| ||||| ||||||  |||||||   |||||||||||||||||||| |||||||    
T  24910724 cttaaacatgtactagcccaattacatagctcaagaataatctctttcgattcgatttttcaattgttgcaccatcaggttcgattctaatttctttcca 24910823  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  24910824 tctctctcaattcatttcgagtgatgaatttgtttcctttacttcccaataatttgtttcatgcttatg 24910892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 201 - 470
Target Start/End: Complemental strand, 45692307 - 45692040
Alignment:
Q  201 atttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaat 300  Q
    ||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||     |||||||||||||| |||    
T  45692307 atttggatgacttttgcactgaaccgcacggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaacaa-----accgcaagaataataaat 45692213  T
Q  301 attacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctt 397  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||||||||||    
T  45692212 attacttaaatatgtactagtccaattacataactcaagaataatctcttttgattcaattttttcattgttgcaccattaggttcgattctaattcctt 45692113  T
Q  398 tccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    ||||||||||||||||||||| ||| ||||||||| | |||||||||| | ||||||||| ||||||| ||||    
T  45692112 tccatctctttcaattcatttacagagatgaatttatatcctttacttcctaataatttgcttcatgcttatg 45692040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 244 - 470
Target Start/End: Original strand, 16529101 - 16529330
Alignment:
Q  244 tgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaata 343  Q
    |||||||||||||||||||||  ||||||||||| |||||||||||||||| ||||||||||||||| ||||| |||| |||||||||||| ||||||||    
T  16529101 tgcggtttgcatctcagcaaccaaaccaaaccaaaccaaaccgcaagaatagtgaatattacttaaacatgtaatagcccaattacatagcccaagaata 16529200  T
Q  344 atctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctt 440  Q
    |||||||||||||| | |||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  16529201 atctcttttgattcgaatttttcattgttgcaccatcaggttcgattctaattcctttccatctctttcaattcatttccagggatcaatttgtttcctt 16529300  T
Q  441 tactttccaataatttgtttcatgcctatg 470  Q
    | ||| | ||||||||||||||||| ||||    
T  16529301 ttcttccaaataatttgtttcatgcttatg 16529330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 195 - 470
Target Start/End: Complemental strand, 32954596 - 32954323
Alignment:
Q  195 cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||| || ||||||||||| || | ||||||||||||| ||||| || |||||||||||||||||||| |||||||||||| ||| |     ||||||    
T  32954596 cacttggttcggatgacttttgcactaaaccgcacggttccgttcggttcgcggtttgcatctcagcaaccgaaccaaaccaaaccata-----agaata 32954502  T
Q  295 atgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaa 391  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||| ||||| |||||| ||||||||||   |||||||| |||||||    
T  32954501 atgaatattacttaaacatgtacaagcccaattacatagctcaagaataatttctttcgattcgatttttccattgttgcaccatcaggttcaattctaa 32954402  T
Q  392 ttcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    || ||||||| |||||||||||||||| ||||||||||||||||||||||||||   ||||||||||||||||| ||||    
T  32954401 ttactttccaactctttcaattcattttcagtgatgaatttgtttcctttacttcataataatttgtttcatgcttatg 32954323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 206 - 470
Target Start/End: Original strand, 1160605 - 1160856
Alignment:
Q  206 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattac 305  Q
    |||||||||| || ||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||        
T  1160605 gatgacttttgcactgaaccgcacgattcggttcgatttgcggtt-gcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaata---- 1160699  T
Q  306 ttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttccat 402  Q
               |||||  |||||||||||||||||||||||| ||| |||||||||||| ||||||||||   |||||| ||||||||||||||||||||    
T  1160700 -----------ctagccaaattacatagctcaagaataatctttttcgattcaatttttccattgttgcaacatcaggtacgattctaattcctttccat 1160788  T
Q  403 ctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    |||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||| ||||    
T  1160789 ctctttcaattcatttccagtgatgattttgtttcctttatttcccaataatttgtttcatgcttatg 1160856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 205 - 470
Target Start/End: Original strand, 51252001 - 51252259
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| ||||||||||| | |||||||| | |||||||||||||||||||||||          ||| |||| |||||||||||||||||||||    
T  51252001 ggatgacttttgcaatgaaccgcgcagttcggtttggtttgcggtttgcatctcagcaac----------caaaccaacccgcaagaataatgaatatta 51252090  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttcca 401  Q
    |||||| ||||||||||  |||||||||||  || |||||||||||||||||| |||||| ||||||||||   |||  |||||||||||||||||||||    
T  51252091 cttaaacatgtactagcctaattacatagccaaataataatctcttttgattcgatttttccattgttgcaccatcaaattcgattctaattcctttcca 51252190  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    |||||||||||||||||||||| || |||||||||| ||| ||| ||||||||||||||||||| ||||    
T  51252191 tctctttcaattcatttccagttataaatttgtttcattttcttcccaataatttgtttcatgcttatg 51252259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 283 - 465
Target Start/End: Complemental strand, 44918975 - 44918790
Alignment:
Q  283 accgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgc---atcag 379  Q
    |||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||| ||||||||  |||||| |||||||||   ||||     
T  44918975 accgcaagaataatgaatattacttaaacatgtactagtccaattacatagctcaagaataatcttttttgatttgatttttccattgttgctccatcaa 44918876  T
Q  380 gttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgc 465  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  44918875 gttcgattctaattcttttccatctctttcgattcatttccagtgattaatttgtttcctttacttcccaataatttgtttcatgc 44918790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 235 - 375
Target Start/End: Complemental strand, 11899521 - 11899381
Alignment:
Q  235 ggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagc 334  Q
    |||| ||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11899521 ggtttgatttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagc 11899422  T
Q  335 tcaagaataatctcttttgattcaattttttcattgttgca 375  Q
    ||||||||||||| ||||||||  |||||| ||||||||||    
T  11899421 tcaagaataatcttttttgatttgatttttccattgttgca 11899381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 309 - 465
Target Start/End: Complemental strand, 29389440 - 29389281
Alignment:
Q  309 aatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttccatctc 405  Q
    |||||||| || || ||||||| | ||||||||||||||||||| |||| |||||| ||||||||||   ||||||||||||||||||||| ||||||||    
T  29389440 aatatgtattatctgaattacacaactcaagaataatctcttttaattcgatttttccattgttgcaccatcaggttcgattctaattcctctccatctc 29389341  T
Q  406 tttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgc 465  Q
    |||||| |||||||||| |||||| ||||||| ||||||| |||||||||||||||||||    
T  29389340 tttcaactcatttccagggatgaacttgtttcttttacttcccaataatttgtttcatgc 29389281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 201 - 347
Target Start/End: Original strand, 6722389 - 6722529
Alignment:
Q  201 atttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaat 300  Q
    ||||||||||||||| || |||||    ||||||| |||||||||||||||||||||||||||| ||||||||     |||||||||||| |||||||||    
T  6722389 atttggatgacttttgcattgaactttgcggttcgattcgatttgcggtttgcatctcagcaaccgaaccaaa-----ccaaaccgcaag-ataatgaat 6722482  T
Q  301 attacttaaatatgtactagctcaattacatagctcaagaataatct 347  Q
    |||||||||| |||||||  | |||||||||||||||||||||||||    
T  6722483 attacttaaacatgtactgacccaattacatagctcaagaataatct 6722529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 195 - 294
Target Start/End: Original strand, 5154958 - 5155057
Alignment:
Q  195 cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||| || |||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  5154958 cacttggttcggatgacttttagactgaaccgcacggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 5155057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 195 - 294
Target Start/End: Complemental strand, 8211738 - 8211639
Alignment:
Q  195 cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||| || |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  8211738 cacttggttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 8211639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 195 - 294
Target Start/End: Complemental strand, 20494193 - 20494094
Alignment:
Q  195 cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||| || |||||||||||| | |||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  20494193 cacttggttcggatgacttttagactgaaccgcgcggttcggttcgatttgctgtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 20494094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 205 - 294
Target Start/End: Original strand, 29707717 - 29707801
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||||||||| | |||||||||||||||||||     ||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  29707717 ggatgacttttagactgaaccgcacggttcggtt-----tgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 29707801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 205 - 259
Target Start/End: Complemental strand, 29390191 - 29390137
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctca 259  Q
    ||||||||||| || |||||||| |||||||||||| ||||||||||||||||||    
T  29390191 ggatgacttttgcactgaaccgcgcggttcggttcggtttgcggtttgcatctca 29390137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 428 - 465
Target Start/End: Complemental strand, 11899301 - 11899264
Alignment:
Q  428 aatttgtttcctttactttccaataatttgtttcatgc 465  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11899301 aatttgtttcctttactttccaataatttgtttcatgc 11899264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 185; Significance: 1e-100; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 235 - 470
Target Start/End: Original strand, 13801578 - 13801816
Alignment:
Q  235 ggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagc 334  Q
    |||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13801578 ggttcggtttgcggtttgcatctcatcaactgaaccaaaccaaaccaaaccgcaagaataatgaatattacttaaatatgtactagcccaattacatagc 13801677  T
Q  335 tcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatt 431  Q
    |||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  13801678 tcaagaataatctcttttgattcaatttttccattgttgcaccatcaggttcgattctaattccttttcatctctttcaattcatttccactgatgaatt 13801777  T
Q  432 tgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    |||||||||||||| |||||||||| |||||||| ||||    
T  13801778 tgtttcctttacttcccaataatttatttcatgcttatg 13801816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 210 - 463
Target Start/End: Complemental strand, 33550830 - 33550574
Alignment:
Q  210 acttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaa 309  Q
    |||||| || |||||||| ||||| |||||| ||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||    
T  33550830 acttttgcactgaaccgcgcggtttggttcggtttgcggtttgcatctcagcaaccgaaccgaaccaaaccaaaccgcaagaataatgaatattacttaa 33550731  T
Q  310 atatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatctct 406  Q
    | |||||||||| |||||||||||| |||||||||||||||||||||| |||||| ||||||||   |||||||||||||||||||||||||| ||||||    
T  33550730 acatgtactagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctttcgatctct 33550631  T
Q  407 ttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcat 463  Q
    || |||||||||| ||||||||||||||||||||| ||| |||||||||||||||||    
T  33550630 tttaattcatttctagtgatgaatttgtttccttttcttcccaataatttgtttcat 33550574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 205 - 470
Target Start/End: Original strand, 35039509 - 35039777
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| |  |||||||| ||||| |||||| |||||||||||||||||| ||||  ||||||||||| |||||||||||||||||||||| |||    
T  35039509 ggatgacttttgcgctgaaccgcgcggtttggttcggtttgcggtttgcatctcaacaaccaaaccaaaccaaaccaaaccgcaagaataatgaatgtta 35039608  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 401  Q
    |||||| |||||||||| |||||||||||| |||||||||||||||||||||| |||||| ||||||||   |||||  ||| |||||||||||||||||    
T  35039609 cttaaacatgtactagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaaattcaattctaattcctttcca 35039708  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    ||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  35039709 tctcttttaattcatttccagtgatgaatttgtttccttttcttcccaataatttgtttcatgcttatg 35039777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 205 - 470
Target Start/End: Complemental strand, 25137655 - 25137388
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| || |||||||| ||||| |||| | || ||||| ||||||||| |||| |||||||||  | ||||||| ||| ||||||||||||||    
T  25137655 ggatgacttttgcactgaaccgcgcggtttggtttggtt-gcggtatgcatctcatcaaccgaaccaaactgaaccaaaccacaataataatgaatatta 25137557  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttcca 401  Q
    |||||| |||||||| | |||||||||||| |||||||||||||||||||||| ||||||||| | |||||   |||||||| |||||||||| |||||     
T  25137556 cttaaacatgtactatcccaattacatagcccaagaataatctcttttgattcgattttttcaatattgcaccatcaggttcaattctaattcatttcct 25137457  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  25137456 tctctttcaattcatttccagtgatgaatttgtttccttttctttccaataatttgtttcatgcttatg 25137388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 195 - 470
Target Start/End: Complemental strand, 15860249 - 15859972
Alignment:
Q  195 cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||| || |||||||||||||| |||||||  ||||||| || | ||||| ||||||| |||| |||| |||||||||||| |||||| |||||||||    
T  15860249 cacttggttcggatgacttttacactgaaccgtgcggttcgatttggtttgcagtttgcacctcaccaaccgaaccaaaccaaaccaaactgcaagaata 15860150  T
Q  295 atgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaa 391  Q
    |||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||| |  |||| ||||||||   |||||| | |||||||||    
T  15860149 atgaatattaattaaacatgtactagcccaattacatagctcaagaataatctcttttgatt-agattttccattgttgcaccatcagttccgattctaa 15860051  T
Q  392 ttcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    ||| |||| ||||||||||||||||||  |||||||||||||||||||||||||  |||||||||||||||||| ||||    
T  15860050 ttcttttctatctctttcaattcatttttagtgatgaatttgtttcctttacttctcaataatttgtttcatgcttatg 15859972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 205 - 464
Target Start/End: Complemental strand, 10591350 - 10591099
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| || |||||||| ||||||| |||| |||||||||||| ||||| |||| |||||||||||| |  |||||||||||||||||||||||    
T  10591350 ggatgacttttgcactgaaccgcgcggttcgattcggtttgcggtttgcgtctcaacaacagaaccaaaccaaactgaaccgcaagaataatgaatatta 10591251  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 401  Q
    |||||| ||||| |||| ||||||||||||||||||||||| ||||| ||||| |||||||||||||||   ||||||||||||||||||||| ||||||    
T  10591250 cttaaacatgtaatagcccaattacatagctcaagaataatgtctttcgattcgattttttcattgttgtaccatcaggttcgattctaattcatttcca 10591151  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatg 464  Q
    |||||||           ||||||| |||||||||| ||||||| ||||||||||||||||||    
T  10591150 tctcttt-----------cagtgattaatttgtttcttttacttcccaataatttgtttcatg 10591099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 207 - 463
Target Start/End: Original strand, 10390613 - 10390858
Alignment:
Q  207 atgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattact 306  Q
    ||||||||| || |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||      
T  10390613 atgacttttgcactgaaccgcgcggttcggttcgatttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaatagta-- 10390710  T
Q  307 taaatatgtactagctcaattacatagctcaa-gaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttccat 402  Q
                 ||  |||||| |||||||| ||||||||| ||| |||||||||||| ||||||||||   |||| ||||||| ||||||||||||||    
T  10390711 -------------gccaaattacgtagctcaaagaataatctttttcgattcaatttttccattgttgcaccatcagattcgattttaattcctttccat 10390797  T
Q  403 ctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcat 463  Q
    |||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  10390798 ctctttcaattcatttccagtgatgaatttgtttcctttatttctcaataatttgtttcat 10390858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 294
Target Start/End: Complemental strand, 12270994 - 12270905
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  12270994 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 12270905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 205 - 294
Target Start/End: Original strand, 5866653 - 5866742
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    ||||| |||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  5866653 ggatgtcttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 5866742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 201 - 321
Target Start/End: Original strand, 10493958 - 10494078
Alignment:
Q  201 atttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaat 300  Q
    ||||| ||||||||| || |||||||    ||||| |||| ||||| |||||||||||||||||| ||||||||||| |||||| |||||||||||   |    
T  10493958 atttgaatgacttttgcactgaaccgtgtagttcgattcggtttgcagtttgcatctcagcaactaaaccaaaccaaaccaaactgcaagaataatcgtt 10494057  T
Q  301 attacttaaatatgtactagc 321  Q
     |||||||||  |||||||||    
T  10494058 gttacttaaacttgtactagc 10494078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Original strand, 10494223 - 10494262
Alignment:
Q  397 ttccatctctttcaattcatttccagtgatgaatttgttt 436  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  10494223 ttccatctccttcaattcattttcagtgatgaatttgttt 10494262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 184; Significance: 2e-99; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 205 - 471
Target Start/End: Original strand, 25297827 - 25298096
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| |  ||||||||||||||||||| | |||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  25297827 ggatgacttttgctttgaaccgcacggttcggtttggtttgtggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaatatta 25297926  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 401  Q
    |||||| |||||||||| |||||||||||||||||||||||| |||||||||| |||||| ||||||||   |||||||||||||||||||| |||||||    
T  25297927 cttaaacatgtactagcccaattacatagctcaagaataatcgcttttgattcgatttttccattgttgcaccatcaggttcgattctaatttctttcca 25298026  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatgc 471  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||    
T  25298027 tctctttcaatttatttccagtgatgaatttgtttcatttacttcccaataatttgtttcatgcttatgc 25298096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 195 - 470
Target Start/End: Complemental strand, 44035831 - 44035553
Alignment:
Q  195 cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||| || ||||||||||| || |||||||| |||||||||| | ||| ||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  44035831 cacttggttcggatgacttttgcactgaaccgcgcggttcggtttggtttacggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 44035732  T
Q  295 atgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgc---atcaggttcgattctaa 391  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||   |||| ||||||||||||    
T  44035731 atgaatattacttaaacatgtactagctcagttacataactcaagaataatctcttttgattcgattttttcattgttgcacgatcaagttcgattctaa 44035632  T
Q  392 ttcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||| ||| ||||    
T  44035631 ttcctttccatctctttcaattcatttccagtgatgaatttgtttcctttacttccaaatattttgtttcttgcttatg 44035553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 206 - 470
Target Start/End: Complemental strand, 11376392 - 11376130
Alignment:
Q  206 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattac 305  Q
    |||||||||| || |||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||     |||||||||||| ||||||||||    
T  11376392 gatgacttttgcactgaaccgcgcggttcggttcggtttgcagtttgcatctcagcaactgaaccaaaccaa-----accgcaagaatactgaatattac 11376298  T
Q  306 ttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttccat 402  Q
    ||||| |||||||||||||||| |||||| ||||||||||| |||||||||| |||||| ||||||||||   |||||||||||||||||||||||||||    
T  11376297 ttaaacatgtactagctcaattgcatagcccaagaataatcgcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctttccat 11376198  T
Q  403 ctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  11376197 ctctttcaattcatttccagtgatgaatttgtttcctttacttcccaataatttgtttcatgcttatg 11376130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 229 - 470
Target Start/End: Original strand, 17916453 - 17916699
Alignment:
Q  229 cggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaatta 328  Q
    |||||||||| | |||| |||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  17916453 cggttcggtttggtttgtggtttgcatctcagcaaccgagccaaaccaaaccaaaccgcaagaataatgaatattacttaaacatgtactagcccaatta 17916552  T
Q  329 catagctcaagaataatctcttttgattcaattttttcattgttgcatc-----aggttcgattctaattcctttccatctctttcaattcatttccagt 423  Q
    |||||||||||||||||||||||||||||| ||||| |||| ||||| |     |||||||||| |||||||||||||||||||||||||||||||||||    
T  17916553 catagctcaagaataatctcttttgattcattttttccattattgcaccatcagaggttcgattataattcctttccatctctttcaattcatttccagt 17916652  T
Q  424 gatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    ||||||||||||| |||||||| | ||||||||||||||||| ||||    
T  17916653 gatgaatttgttttctttacttccaaataatttgtttcatgcttatg 17916699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 205 - 470
Target Start/End: Original strand, 44979346 - 44979614
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    |||||| |||| || |||||||| ||||| | || | |||||||||||||||||||| || |||||||||||| |||||||||||||||||||||| |||    
T  44979346 ggatgaattttgcactgaaccgcgcggtttgatttggtttgcggtttgcatctcagctaccgaaccaaaccaaaccaaaccgcaagaataatgaatgtta 44979445  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 401  Q
    |||||| |||||||||| |||||||||||| || ||||||||||||||||||| |||||| ||||||||   ||| |||||| |||||||||||||||||    
T  44979446 cttaaacatgtactagcccaattacatagcccaggaataatctcttttgattcgatttttccattgttgcaccatgaggttcaattctaattcctttcca 44979545  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||    
T  44979546 tctcttttaattcatttccagtgatgaatttgtttccttttctttccaataatttgcttcatgcttatg 44979614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 206 - 470
Target Start/End: Original strand, 19936697 - 19936959
Alignment:
Q  206 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattac 305  Q
    |||| ||||| || ||||| || |||||||||||| ||||| ||||| |||||||||||     |||||||| |||||||||||||||||||||||||||    
T  19936697 gatgtctttttcactgaactgcgcggttcggttcggtttgcagtttgtatctcagcaac-----caaaccaaaccaaaccgcaagaataatgaatattac 19936791  T
Q  306 ttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccat 402  Q
    ||| | |||||||||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||   ||||| |||||||||||||| ||||||||    
T  19936792 ttatacatgtactagctcaaatacatagctcaagaataatatattttgattcgattttttcattgttgcaccatcatgttcgattctaatttctttccat 19936891  T
Q  403 ctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    ||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||    
T  19936892 ctcattcaattcatttccagtgctgaatttgtttcctttacttcccaataatttgtttcatgcttatg 19936959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 229 - 470
Target Start/End: Complemental strand, 34910792 - 34910552
Alignment:
Q  229 cggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaatta 328  Q
    |||||||||| | ||| ||||||| |||| |||||| ||| ||||||||     |||||||||||||||||||||||||||| |||||||| | ||||||    
T  34910792 cggttcggtttggtttacggtttgaatctgagcaaccgaaacaaaccaa-----accgcaagaataatgaatattacttaaacatgtactaacccaatta 34910698  T
Q  329 catagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatctctttcaattcatttccagtga 425  Q
    |||||| |||||||||| ||||||||||| |||||| ||||||||   ||||| ||||||||||||||| ||| ||| ||| ||||||||||| | ||||    
T  34910697 catagcccaagaataatatcttttgattcgatttttccattgttgcaccatcaagttcgattctaattcgttttcatttctctcaattcattttctgtga 34910598  T
Q  426 tgaatttgtttcctttacttt-ccaataatttgtttcatgcctatg 470  Q
    |||||||||||||||| |||| ||||||||||||||||||| ||||    
T  34910597 tgaatttgtttccttttctttcccaataatttgtttcatgcttatg 34910552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 207 - 399
Target Start/End: Complemental strand, 18360310 - 18360115
Alignment:
Q  207 atgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattact 306  Q
    ||||||||| || |||||| | |||||||||| | ||| | ||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||    
T  18360310 atgacttttgcattgaaccacgcggttcggtttggtttacagtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatcaatattact 18360211  T
Q  307 taaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttc 399  Q
    ||||  ||||||||| |||||||||||| | | |||||||||||||||||| |||||| ||||||||   ||||| |||||||||||||| |||||    
T  18360210 taaacttgtactagcccaattacatagcccgaaaataatctcttttgattcgatttttccattgttgcaccatcatgttcgattctaatttctttc 18360115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 344 - 470
Target Start/End: Complemental strand, 20420572 - 20420443
Alignment:
Q  344 atctcttttgattcaattttttcattgttgcatca---ggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctt 440  Q
    ||||| ||| |||| |||||| |||||||||||||   |||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||    
T  20420572 atctcctttaattcgatttttccattgttgcatcatcaggtttgattctaattcctttccatctccttcaattcatttccaatgatgaatttgtttcatt 20420473  T
Q  441 tactttccaataatttgtttcatgcctatg 470  Q
    | ||| ||||||||||| ||||||| ||||    
T  20420472 ttcttcccaataatttgattcatgcttatg 20420443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 294
Target Start/End: Complemental strand, 9811828 - 9811739
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  9811828 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 9811739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 205 - 294
Target Start/End: Complemental strand, 20420866 - 20420777
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  20420866 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaatcgaaccaaaccaaaccaaaccgcaaaaata 20420777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 205 - 277
Target Start/End: Complemental strand, 16579078 - 16579006
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaa 277  Q
    |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16579078 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaactgaaccaaaccaa 16579006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 205 - 294
Target Start/End: Original strand, 36412932 - 36413021
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||||||||| | |||||||  |||||||||||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  36412932 ggatgacttttagactgaaccgtgcggttcggttcggtttgcggtttgcatctcagcaatcgaaccaaaccaaaccaaaccgcaaaaata 36413021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 195 - 295
Target Start/End: Original strand, 42785091 - 42785191
Alignment:
Q  195 cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||| || ||||||||||| || |||||| | |||||||||| | ||||||||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  42785091 cacttggttcggatgacttttgcattgaaccacgcggttcggtttggtttgcggtttgcatctcagaaaccgaaccaaaccaaaccaaaccgtaagaata 42785190  T
Q  295 a 295  Q
    |    
T  42785191 a 42785191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 18357589 - 18357514
Alignment:
Q  395 ctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    ||||||||||  ||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||| ||||    
T  18357589 ctttccatcttcttcaattcatttccagtgatgaatttgtttcattttcttcccaataatttgtttcatgcttatg 18357514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 44086025 - 44085956
Alignment:
Q  220 tgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaa 289  Q
    ||||||||| |||| |||| | |||| ||||| ||| ||| |||| |||||||||||| |||||||||||    
T  44086025 tgaaccgcatggtttggtttggtttgtggttttcatttcaccaaccgaaccaaaccaaaccaaaccgcaa 44085956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 183; Significance: 8e-99; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 205 - 470
Target Start/End: Original strand, 12680646 - 12680914
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| ||||||||||| ||||| |||| | ||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||    
T  12680646 ggatgacttttgcaatgaaccgcgcggtttggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaatgatgaatatta 12680745  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 401  Q
    |||||| |||||||||| |||||||||| || || |||||||||||||||||| |||||| ||||||||   ||||||||||||||||||||||||||||    
T  12680746 cttaaacatgtactagcccaattacataacttaaaaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctttcca 12680845  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  12680846 tctctttcaattcatttcaagtgatgaatttgtttcctttacttttcaataatttgtttcatgcttatg 12680914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 205 - 464
Target Start/End: Original strand, 2226454 - 2226716
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| || | |||||| |||||| ||||| ||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  2226454 ggatgacttttgcacttaaccgcgcggttcagttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgccagaataatgaatatta 2226553  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 401  Q
    |||||| ||||| |||| ||||||||||||||| ||||||||||||||||||| |||||| ||||||||   ||||||||||||||||||||||||||||    
T  2226554 cttaaacatgtattagcccaattacatagctcatgaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctttcca 2226653  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatg 464  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||    
T  2226654 tctctttcaattcatttcctgtgatgaatatgtttcctttacttcccaataatttgtttcatg 2226716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 205 - 461
Target Start/End: Original strand, 12165514 - 12165773
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| || ||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  12165514 ggatgacttttgcactgaaccgcatggttcggttcggtttgcagtttgcatctcagcaactgaaccaaacgaaaccaaaccgcaagaataatgaatatta 12165613  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 401  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||| ||||| || ||| ||||||||   |||||||||| ||| |||||||||| ||    
T  12165614 cttaaacatgtactagcccaattacatagctcaagaataatctctttcgattcgatctttccattgttgcaccatcaggttcaattttaattccttttca 12165713  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttc 461  Q
    |||||||| ||| |||||||||||||||||||||||||||||||  ||||||||||||||    
T  12165714 tctctttcgatttatttccagtgatgaatttgtttcctttacttgtcaataatttgtttc 12165773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 206 - 470
Target Start/End: Original strand, 36103183 - 36103450
Alignment:
Q  206 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattac 305  Q
    |||||||||| || |||||||| ||||||| || | ||||  ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  36103183 gatgacttttgcactgaaccgcgcggttcgttttggtttgtagtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaatattac 36103282  T
Q  306 ttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccat 402  Q
    || || |||||||||| ||| ||||||||||||||||||||  ||||||||| |||||| ||||||||   ||||| |||||||||||||||||||||||    
T  36103283 ttgaacatgtactagcccaactacatagctcaagaataatcgtttttgattcgatttttccattgttgcaccatcaagttcgattctaattcctttccat 36103382  T
Q  403 ctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||| ||||    
T  36103383 ctctttcaattcatttacagtgatgaatttgtttcatttactttccaataatttgtttgatgcttatg 36103450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 206 - 470
Target Start/End: Complemental strand, 9161491 - 9161226
Alignment:
Q  206 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattac 305  Q
    |||||||||| || |||||||  |||||||||||| ||||||||||| ||||||||||| |||||||||||| || ||||||||||||||||||||||||    
T  9161491 gatgacttttgcactgaaccgtgcggttcggttcggtttgcggtttgaatctcagcaaccgaaccaaaccaaacccaaccgcaagaataatgaatattac 9161392  T
Q  306 ttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccat 402  Q
    ||||||||| |||||| |||  ||||||||||  |||||||||||||||||| |||||| ||||||||   ||||| |||| ||||||||||||||||||    
T  9161391 ttaaatatgcactagcccaa--acatagctcagaaataatctcttttgattcgatttttccattgttgcaccatcaagttcaattctaattcctttccat 9161294  T
Q  403 ctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    |||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||    
T  9161293 ctctttgaattcatttccagtgatgaatttatttcctttacttcccaataatttgtttcatgcttatg 9161226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 205 - 470
Target Start/End: Original strand, 32520796 - 32521059
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| ||||||||||| |||||||||| | |||||| | |||||||||||||| ||||||||||||     ||||||||||| ||||||||||    
T  32520796 ggatgacttttgcaatgaaccgcgcggttcggtttggtttgcgatctgcatctcagcaaccgaaccaaaccaa-----accgcaagaatgatgaatatta 32520890  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 401  Q
    |||||| |||||||||| ||||||||||  | ||||||||||||||||||||| |||||||||||||||   ||||||||||||||||| ||| ||||||    
T  32520891 cttaaagatgtactagcccaattacataatttaagaataatctcttttgattcgattttttcattgttgcaccatcaggttcgattctagttcatttcca 32520990  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    |||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||| ||||    
T  32520991 tctctttcaattcatttcaagtgatgaatttgtttcttttacttcccaataatttgtttcatgcttatg 32521059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 195 - 470
Target Start/End: Original strand, 332842 - 333122
Alignment:
Q  195 cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||| || ||| ||||||| || |||||||| | |||||||| | ||||||||||||||||||||| | |||||||||||| | ||||||||||||||    
T  332842 cacttggttcggacgacttttgcactgaaccgcgcagttcggtttggtttgcggtttgcatctcagcatccgaaccaaaccaaactaaaccgcaagaata 332941  T
Q  295 atgaatattacttaaatatgtactagctcaattac--atagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattct 389  Q
    |||||||||||||||| ||||||| || |||||||  |||||||||||||||||| ||||||||| |||||| |||  |||   ||||| ||||||||||    
T  332942 atgaatattacttaaacatgtactggcccaattacatatagctcaagaataatctattttgattcgatttttccataattgcaccatcaagttcgattct 333041  T
Q  390 aattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    |||||||||| |||||||||||||||||||| ||||||||||| |||| ||||||| ||||||||||||||||||| ||||    
T  333042 aattcctttctatctctttcaattcatttcccgtgatgaatttatttcttttacttcccaataatttgtttcatgcttatg 333122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 234 - 465
Target Start/End: Original strand, 30265393 - 30265626
Alignment:
Q  234 cggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatag 333  Q
    ||||||| ||||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||||||||||||  |||| ||||| |||||||||||    
T  30265393 cggttcggtttgcggtttgcatctcagcaaccgaaccaaatcaaaccaaatcgcaagaataatgaatattacttaatcatgtgctagcccaattacatag 30265492  T
Q  334 ctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaat 430  Q
    ||||| ||||| | ||||  |||| |||||| ||||||||||   ||| ||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  30265493 ctcaaaaataa-cgctttcaattcgatttttccattgttgcaccatcaagttcgattctaattattttccatctctttcaattcatttccagtgatgaat 30265591  T
Q  431 ttgtttcctttactttccaataatttgtttcatgc 465  Q
    ||||||||||||||| |||||||||||||||||||    
T  30265592 ttgtttcctttacttcccaataatttgtttcatgc 30265626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 201 - 462
Target Start/End: Complemental strand, 38434201 - 38433937
Alignment:
Q  201 atttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaat 300  Q
    ||||||||||||||| || |||||||   ||||||||| ||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||  |||    
T  38434201 atttggatgacttttgcactgaaccgtgaggttcggtttgatttgcggtttgtatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataagaaat 38434102  T
Q  301 attacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctt 397  Q
    ||||||||||  ||||||||| ||||||||||||  |||||||||||||||| |||| |||||| ||||||||   ||||| ||||||||||||||| ||    
T  38434101 attacttaaacttgtactagcccaattacatagcctaagaataatctcttttaattcgatttttccattgttgcaccatcacgttcgattctaattcttt 38434002  T
Q  398 tccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttca 462  Q
    | |||||| || |||||||||||| |||||||||| ||| |||| ||| ||||||||||||||||    
T  38434001 ttcatctcctttaattcatttccaatgatgaatttattttcttttcttcccaataatttgtttca 38433937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 205 - 464
Target Start/End: Complemental strand, 10174566 - 10174322
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| || |||||||| ||||| | |||||||||||||||||||||||||||| |||||||||||| |||||||||||    |||||||||||    
T  10174566 ggatgacttttgcactgaaccgcgcggtttg-ttcgatttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaa----aatgaatatta 10174472  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 401  Q
    |||||| |||||||| | |||||||||| ||||||   ||||||||||||||| |||||||||||||||   |||||||||||||| |||||| ||| ||    
T  10174471 cttaaacatgtactatcccaattacataactcaag---aatctcttttgattcgattttttcattgttgcaccatcaggttcgattataattcattttca 10174375  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatg 464  Q
    |||||||||          ||||||||||||||||||||||||||| ||||||||||||||||    
T  10174374 tctctttca----------agtgatgaatttgtttcctttactttctaataatttgtttcatg 10174322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 205 - 465
Target Start/End: Original strand, 36176691 - 36176934
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| || | ||||||| ||||||| | | ||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||| |||||    
T  36176691 ggatgacttttgcactaaaccgcatggttcgggttggtttgcggtttgcatctcagcaaccgaaccaaatcaaaccaaaccgcaagaataatgactatta 36176790  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgcatcaggttcgattctaattcctttccatct 404  Q
    ||||||  ||||||||| ||||||||||||||||||| |||| || |||   ||               |||||||||| ||||||||||||||||||||    
T  36176791 cttaaacgtgtactagcccaattacatagctcaagaaaaatcactgttg---ca--------------ccatcaggttcaattctaattcctttccatct 36176873  T
Q  405 ctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgc 465  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  36176874 ctttcgattcatttccaatgatgaatttgtttcctttactttccaataattagtttcatgc 36176934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 298 - 461
Target Start/End: Complemental strand, 35893405 - 35893238
Alignment:
Q  298 aatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattc 394  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||  |||||||||||||||||   ||| | |||||||||||||    
T  35893405 aatattacttaaacatgtactagcccaattacatagctcaagaataatctctttcgatttgattttttcattgttgcaccatcacgctcgattctaattc 35893306  T
Q  395 cttt-ccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttc 461  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  35893305 cttttccatctttttcaattcatttccagtgatgaatttgtttcctttacttcccaataatttgtttc 35893238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 286 - 465
Target Start/End: Complemental strand, 42545086 - 42544902
Alignment:
Q  286 gcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggtt 382  Q
    ||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||  |||||||||| || ||||||||||   ||| ||| |    
T  42545086 gcaagaataatgaatattacttaaatatgtaatagcccaataacatagctcaagaataatctaatttgattcaacttgttcattgttgcaccataaggct 42544987  T
Q  383 cgattctaattcctttccatctctttca--attcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgc 465  Q
     |||| |||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||  ||||||||| ||||||||    
T  42544986 tgattttaattcttttccatctctttcaatattcatttccagtgatgaatttgtttcctttacttctcaataatttatttcatgc 42544902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 246 - 470
Target Start/End: Complemental strand, 23781182 - 23780977
Alignment:
Q  246 cggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataat 345  Q
    ||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||| |                 ||||||| |||||||||||||||    
T  23781182 cggtttgcatctcagcaactgaaccaagccaaaccaaaccgcaaaaataatgaatattcc-----------------caattacttagctcaagaataat 23781100  T
Q  346 ctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttccttta 442  Q
    |||||||||||  |||||| ||||||||   |||| ||||||||||||||||||||||||||||||||||||||||||     |||||||||||||||||    
T  23781099 ctcttttgatttgatttttccattgttgtaccatcgggttcgattctaattcctttccatctctttcaattcatttcc-----tgaatttgtttccttta 23781005  T
Q  443 ctttccaataatttgtttcatgcctatg 470  Q
    ||| ||||||||||||||||||| ||||    
T  23781004 cttcccaataatttgtttcatgcttatg 23780977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 246 - 470
Target Start/End: Complemental strand, 23868135 - 23867930
Alignment:
Q  246 cggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataat 345  Q
    ||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||| |                 ||||||| |||||||||||||||    
T  23868135 cggtttgcatctcagcaactgaaccaagccaaaccaaaccgcaaaaataatgaatattcc-----------------caattacttagctcaagaataat 23868053  T
Q  346 ctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttccttta 442  Q
    |||||||||||  |||||| ||||||||   |||| ||||||||||||||||||||||||||||||||||||||||||     |||||||||||||||||    
T  23868052 ctcttttgatttgatttttccattgttgtaccatcgggttcgattctaattcctttccatctctttcaattcatttcc-----tgaatttgtttccttta 23867958  T
Q  443 ctttccaataatttgtttcatgcctatg 470  Q
    ||| ||||||||||||||||||| ||||    
T  23867957 cttcccaataatttgtttcatgcttatg 23867930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 205 - 357
Target Start/End: Original strand, 36176460 - 36176612
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| || | ||||||| ||||||| | | ||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||| |||||    
T  36176460 ggatgacttttgcactaaaccgcatggttcgggttggtttgcggtttgcatctcagcaaccgaaccaaatcaaaccaaaccgcaagaataatgactatta 36176559  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattc 357  Q
    ||||||  ||||||||| ||||||||||||||||||| |||||||||||||||    
T  36176560 cttaaacgtgtactagcccaattacatagctcaagaaaaatctcttttgattc 36176612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 331 - 464
Target Start/End: Original strand, 9988586 - 9988722
Alignment:
Q  331 tagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttccatctctttcaattcatttccagtgatg 427  Q
    |||| |||||| ||||||||||||||||||||||||||| |||||   |||| ||||||| |||||||||| |||||| ||||||||||||| |||||||    
T  9988586 tagcccaagaacaatctcttttgattcaattttttcattcttgcaccatcagattcgattttaattccttttcatctccttcaattcatttctagtgatg 9988685  T
Q  428 aatttgtttcctttactttccaataatttgtttcatg 464  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  9988686 aatttgtttccttttctttcaaataatttgtttcatg 9988722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 374 - 470
Target Start/End: Original strand, 38334707 - 38334803
Alignment:
Q  374 catcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||| ||| ||||||||||| ||||||| ||||    
T  38334707 catcaggttcgattctaattcctttccatctccttcaattcatttccaatgatgaatttgtttcattttcttcccaataatttgattcatgcttatg 38334803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 202 - 294
Target Start/End: Complemental strand, 701658 - 701566
Alignment:
Q  202 tttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    ||||||||||||||| | | ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  701658 tttggatgacttttagactaaaccgcacggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 701566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 279 - 462
Target Start/End: Original strand, 17084520 - 17084706
Alignment:
Q  279 ccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---ca 375  Q
    |||||||||||||||||| |||||||||||||  ||||||| | ||||||||||   ||| |||||||| ||||||||| |||||| |||| |||   ||    
T  17084520 ccaaaccgcaagaataatcaatattacttaaacttgtactaacccaattacataatccaaaaataatctattttgattcgatttttccattattgcacca 17084619  T
Q  376 tcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttca 462  Q
    ||| |||||| |||| ||  ||| |||||| ||||||  |||| |||||||||||||||||||||| ||  |||||||||| |||||    
T  17084620 tcaagttcgaatctatttgtttttcatctccttcaatcaattttcagtgatgaatttgtttccttttctccccaataatttatttca 17084706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 294
Target Start/End: Original strand, 666903 - 666992
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  666903 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 666992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 294
Target Start/End: Original strand, 27885718 - 27885807
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  27885718 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 27885807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 205 - 294
Target Start/End: Complemental strand, 8409424 - 8409335
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||||||||| | |||| ||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  8409424 ggatgacttttagactgaatcgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 8409335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 205 - 294
Target Start/End: Complemental strand, 11917893 - 11917804
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||||||||| | | |||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  11917893 ggatgacttttagactaaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 11917804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 205 - 294
Target Start/End: Original strand, 38334386 - 38334475
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| ||||||||| || ||||||||||| ||||    
T  38334386 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaactaaaccaaaccgcaaaaata 38334475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 205 - 294
Target Start/End: Complemental strand, 15068914 - 15068825
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||||||||| | |||||||| |||||||||||| |||||||||||||||||| ||||  ||||||||||| ||||||||||| ||||    
T  15068914 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcaacaaccaaaccaaaccaaaccaaaccgcaaaaata 15068825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 205 - 294
Target Start/End: Complemental strand, 30002436 - 30002347
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||| ||||| | |||||||| |||||||||||| |||||||||| |||||||||||| |||||||||||| ||||||||||| ||||    
T  30002436 ggatgatttttagactgaaccgcgcggttcggttcggtttgcggtttacatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 30002347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 206 - 276
Target Start/End: Complemental strand, 42545892 - 42545822
Alignment:
Q  206 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaacca 276  Q
    |||||||||| || | |||||| |||||||||||| |||||||||||||||||| |||| |||||||||||    
T  42545892 gatgacttttgcactaaaccgcgcggttcggttcggtttgcggtttgcatctcaacaaccgaaccaaacca 42545822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 470
Target Start/End: Complemental strand, 35893247 - 35893205
Alignment:
Q  428 aatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    |||||||||||||||||| ||||||||||||||||||| ||||    
T  35893247 aatttgtttcctttacttcccaataatttgtttcatgcttatg 35893205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 289
Target Start/End: Original strand, 691159 - 691226
Alignment:
Q  222 aaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaa 289  Q
    ||||||| |||| |||| |||||||||||| ||| | | |||| |||||||||||| |||||||||||    
T  691159 aaccgcatggtttggtttgatttgcggttttcattttaccaaccgaaccaaaccaaaccaaaccgcaa 691226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 174; Significance: 2e-93; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 205 - 465
Target Start/End: Original strand, 6003964 - 6004227
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| || ||||||||  |||| |||||| |||||||||||||||||||| || |||||||||||| |||||||||||||||||||||| |||    
T  6003964 ggatgacttttgcactgaaccgcgaggtttggttcggtttgcggtttgcatctcagctaccgaaccaaaccaaaccaaaccgcaagaataatgaatgtta 6004063  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 401  Q
    |||||| |||||||||| |||||||||||| |||||||||||||||||||||| |||||| ||||||||   |||||||||| |||||||||||||||||    
T  6004064 cttaaacatgtactagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcaattctaattcctttcca 6004163  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgc 465  Q
    ||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  6004164 tctcttttaattcatttccagtgatgaatttgtttccttttcttcccaataatttgtttcatgc 6004227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 208 - 465
Target Start/End: Original strand, 35531736 - 35531991
Alignment:
Q  208 tgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattactt 307  Q
    |||||||| || ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||     |||||||||||||||||||||||||    
T  35531736 tgacttttgcactgaaccgcacggttcagttcgatttgcagtttgcatctcagcaaccgaaccaaaccaa-----accgcaagaataatgaatattactt 35531830  T
Q  308 aaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatct 404  Q
    ||| |||||||||| ||||| ||||||||||||||||||  |||| |||| |||||| ||||||||   ||||| |||||||||||||||||||||||||    
T  35531831 aaacatgtactagcccaattgcatagctcaagaataatcgttttttattcgatttttccattgttgcaccatcatgttcgattctaattcctttccatct 35531930  T
Q  405 ctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgc 465  Q
    ||||||||||||||||  | |||||| |||||||||||||| |||||||||||||||||||    
T  35531931 ctttcaattcatttccgtttatgaatgtgtttcctttacttcccaataatttgtttcatgc 35531991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 201 - 470
Target Start/End: Original strand, 21586419 - 21586685
Alignment:
Q  201 atttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaat 300  Q
    ||||||||||||||| || | |||||| ||||||||||     ||| ||||||||||||||||| |||||||||||| ||||| ||||||||||||||||    
T  21586419 atttggatgacttttgcactaaaccgcgcggttcggtt-----tgcagtttgcatctcagcaaccgaaccaaaccaa-ccaaatcgcaagaataatgaat 21586512  T
Q  301 attacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgcatca---ggttcgattctaattcctt 397  Q
    |||||||||| ||||||||||  |||||||||| ||||||||||| ||||| ||||| |||||| |||||||||| ||   |||||||||||||||||||    
T  21586513 attacttaaacatgtactagccaaattacatagttcaagaataatatctttcgattcgatttttccattgttgcaccatgaggttcgattctaattcctt 21586612  T
Q  398 tccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||  || ||||||||||||||| ||||    
T  21586613 tccatctctttcaattcatttccggtgatgaatttgtttcctttatttctcagtaatttgtttcatgcttatg 21586685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 195 - 470
Target Start/End: Original strand, 50562152 - 50562420
Alignment:
Q  195 cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||| || |||||||||||||| |||| ||  || |||||||||||||||| ||||||||||| ||||  |||||||||           ||||||||    
T  50562152 cacttggttcggatgacttttacactgaatcgtgcgattcggttcgatttgcgatttgcatctcaacaacaaaaccaaaccc----------caagaata 50562241  T
Q  295 atgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaa 391  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| |||||| ||||||||   ||||||||||||||||||    
T  50562242 atgaatattacttaaacatgtactagcccaattacatagctcaagaataatctctttcgattcgatttttccattgttgcaccatcaggttcgattctaa 50562341  T
Q  392 ttcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    |||||||||||||||||||||| |||| |||||||||||||||||| ||||||| | ||||||||||||||||| ||||    
T  50562342 ttcctttccatctctttcaatttattttcagtgatgaatttgtttcatttacttccaaataatttgtttcatgcttatg 50562420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 266 - 470
Target Start/End: Complemental strand, 33002968 - 33002761
Alignment:
Q  266 gaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaatttttt 365  Q
    ||||||||| || ||||||||||||||||||||||||| ||||||||||||| ||  |||||||||||||||| |||||||||||||||||| ||||||     
T  33002968 gaaccaaactaaaccaaaccgcaagaataatgaatatttcttaaatatgtaccagtccaattacatagctcaataataatctcttttgattcgatttttc 33002869  T
Q  366 cattgttg---catcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttca 462  Q
    ||||||||   |||||||||||||||||| ||||||||||||||||||||| |||||| |||| | |||||||||||||||| |||||||||||||||||    
T  33002868 cattgttgcaccatcaggttcgattctaactcctttccatctctttcaatttatttcctgtgaagtatttgtttcctttactctccaataatttgtttca 33002769  T
Q  463 tgcctatg 470  Q
    ||| ||||    
T  33002768 tgcttatg 33002761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 195 - 463
Target Start/End: Complemental strand, 32880823 - 32880547
Alignment:
Q  195 cacttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||| || ||||||||||| || |||||||| | |||||||| | ||| ||||||||||||||||||| ||||||||||||     |||||||||| |    
T  32880823 cacttggttcggatgacttttgcactgaaccgcgcagttcggtttggtttacggtttgcatctcagcaaccgaaccaaaccaa-----accgcaagaaaa 32880729  T
Q  295 atgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaa 391  Q
    |||||||||||||||| |||||||||  |||||||||||||||||  |||||||||| ||||  |||||| ||||||||   ||||||||| ||||||||    
T  32880728 atgaatattacttaaacatgtactagtccaattacatagctcaagtttaatctctttcgatttgatttttccattgttgcaccatcaggtttgattctaa 32880629  T
Q  392 ttcctttccatctctttca----------attcatttccagtgatgaatttgtttcctttactttccaataatttgtttcat 463  Q
    |||||||||||||||||||          ||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  32880628 ttcctttccatctctttcaattcatttccattcatttccagtgatgaatttgtttcctttacttcccaataatttctttcat 32880547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 282 - 465
Target Start/End: Complemental strand, 39098373 - 39098187
Alignment:
Q  282 aaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catca 378  Q
    ||||||||||||||||||||||||||||| |||||||| | |||||| |||||||||||||||||| |||||| || |||||||||||||||   |||||    
T  39098373 aaccgcaagaataatgaatattacttaaacatgtactaacacaattaaatagctcaagaataatcttttttgaatcgattttttcattgttgcaccatca 39098274  T
Q  379 ggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgc 465  Q
    || | |||||||||| ||||||||||||||||||||||||| |||||  || ||||||||||||||| |||||||||||||| ||||    
T  39098273 ggattgattctaatttctttccatctctttcaattcatttcgagtgacaaacttgtttcctttacttcccaataatttgtttgatgc 39098187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 234 - 470
Target Start/End: Complemental strand, 43030895 - 43030671
Alignment:
Q  234 cggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaa-ccgcaagaataatgaatattacttaaatatgtactagctcaattacata 332  Q
    ||||||| ||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||               |||||  |||||||||    
T  43030895 cggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaaccgcaagaataatgaata---------------ctagccaaattacata 43030811  T
Q  333 gctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaa 429  Q
    ||||||||||||||| ||| ||||| |||||| ||||||||||   ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  43030810 gctcaagaataatctttttcgattcgatttttccattgttgcaccatcaagttcgattctaattcctttccatctctttcaattcatctccagtgatgaa 43030711  T
Q  430 tttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    ||| ||||||||| || ||||||||||||||||||| ||||    
T  43030710 ttt-tttcctttatttcccaataatttgtttcatgcttatg 43030671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 205 - 329
Target Start/End: Original strand, 48032712 - 48032836
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| ||||||||||| |||||||||| | ||||||||||||||||||||| | |||||||||||| ||||||||||||||| ||||||||||    
T  48032712 ggatgacttttgcaatgaaccgcgcggttcggtttggtttgcggtttgcatctcagcagccgaaccaaaccaaaccaaaccgcaagaatcatgaatatta 48032811  T
Q  305 cttaaatatgtactagctcaattac 329  Q
    |||||| |||||||||| |||||||    
T  48032812 cttaaacatgtactagcccaattac 48032836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 336 - 470
Target Start/End: Original strand, 27641870 - 27642007
Alignment:
Q  336 caagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaattt 432  Q
    |||||||||||||||||||||| |||||| |||||| |||   |||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||    
T  27641870 caagaataatctcttttgattcgatttttccattgtagcaccatcaggttcgaatctaattcctctccatctctttcaattcattttcagtgatgaattt 27641969  T
Q  433 gtttcctttactttccaataatttgtttcatgcctatg 470  Q
     |||||||| ||| ||||||||||||||||||| ||||    
T  27641970 atttccttttcttcccaataatttgtttcatgcttatg 27642007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 294
Target Start/End: Complemental strand, 10369699 - 10369610
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  10369699 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 10369610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 196 - 294
Target Start/End: Complemental strand, 34795021 - 34794923
Alignment:
Q  196 acttgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    ||||| || |||||||||||| | |||||||  |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  34795021 acttggttcggatgacttttagactgaaccgtgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 34794923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 205 - 294
Target Start/End: Original strand, 35401805 - 35401894
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||    
T  35401805 ggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaatcgaaccaaaccaaaccaaaccgcaaaaata 35401894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 205 - 294
Target Start/End: Original strand, 51149303 - 51149392
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||||||||| | |||||||| |||||||||||| ||| |||||||||||||||||||  ||||||||||| ||||||||||| ||||    
T  51149303 ggatgacttttagactgaaccgcgcggttcggttcggtttacggtttgcatctcagcaacctaaccaaaccaaaccaaaccgcaaaaata 51149392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 205 - 294
Target Start/End: Original strand, 4669228 - 4669317
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||||||||| | |||||||| |||||||||||| |||||| ||||||||||||||||  ||||||||||| | ||||||||| ||||    
T  4669228 ggatgacttttagactgaaccgcgcggttcggttcggtttgcgatttgcatctcagcaaccaaaccaaaccaaactaaaccgcaaaaata 4669317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 205 - 294
Target Start/End: Complemental strand, 33361401 - 33361312
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||||||||| | |||||||| |||||  ||||  ||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||    
T  33361401 ggatgacttttagactgaaccgcgcggtttagttcagtttgcggtttgcatctcagcaaccgaaccgaaccaaaccaaaccgcaaaaata 33361312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 277
Target Start/End: Original strand, 27641794 - 27641865
Alignment:
Q  206 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaa 277  Q
    |||||||||| || ||||||||  |||| | || | |||||||||||||||||||| ||| |||||||||||    
T  27641794 gatgacttttgcactgaaccgcgtggtttgatttggtttgcggtttgcatctcagccactaaaccaaaccaa 27641865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 173; Significance: 8e-93; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 207 - 470
Target Start/End: Original strand, 36827365 - 36827631
Alignment:
Q  207 atgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattact 306  Q
    ||||||||| || |||||| ||||||| |||||| ||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||    
T  36827365 atgacttttgcactgaaccacacggtttggttcggtttgcggtttgcatctcagcagccgaaccaaaccaaaccaaaccgcaagaataatgaatattact 36827464  T
Q  307 taaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatc 403  Q
    |||| |||||||||| |||||||||||||||||| |||||||||| |||||||||||| ||||||||   |||||||||||||||||||| |||||||||    
T  36827465 taaacatgtactagcccaattacatagctcaagattaatctctttcgattcaatttttccattgttgcaccatcaggttcgattctaatttctttccatc 36827564  T
Q  404 tctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    |||||||||| |||||||  |||||||||||||| ||||||| ||||||||||||||||||| ||||    
T  36827565 tctttcaatttatttccaccgatgaatttgtttcttttacttcccaataatttgtttcatgcttatg 36827631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 205 - 470
Target Start/End: Complemental strand, 30392591 - 30392324
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    |||||||||||  | |||||||| ||||| |||||  ||||||||||| |||||| |||| |||||||||||| ||||||||||||||||||||||||||    
T  30392591 ggatgacttttttactgaaccgcgcggtttggttcagtttgcggtttgtatctcaacaaccgaaccaaaccaaaccaaaccgcaagaataatgaatatta 30392492  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgc---atcaggttcgattctaattcctttcca 401  Q
    |||||| |||||||||| |||||||||||| ||| |||||||||||||||||| |||||| ||||| |||   || ||||| ||||||||||||||||||    
T  30392491 cttaaacatgtactagcccaattacatagcccaacaataatctcttttgattcgatttttccattgctgcactatgaggtttgattctaattcctttcca 30392392  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    ||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||    
T  30392391 tctcttttaattcatttccagtgatgaatttgtttccttttc-ttccaataatttgtttcatgcttatg 30392324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 205 - 463
Target Start/End: Complemental strand, 14549735 - 14549478
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| || |||||||| |||||||||||| ||||||||||||||||||||| | ||||||||||||     |||| |||||||||||||||||    
T  14549735 ggatgacttttgcactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcatccgaaccaaaccaa-----accgtaagaataatgaatatta 14549641  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 401  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||| | |||| ||||||||   ||||||||||||||||| ||||||||||    
T  14549640 cttaaacatgtactagcccaattacatagctcaagaataatctcttttgattcgaattttccattgttgtaccatcaggttcgattctatttcctttcca 14549541  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttcc-aataatttgtttcat 463  Q
    |||||||||||| |||| |||||||||||||||||||||||||| || ||||| |||||||||    
T  14549540 tctctttcaattaattttcagtgatgaatttgtttcctttacttcccaaataaattgtttcat 14549478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 206 - 470
Target Start/End: Complemental strand, 10661658 - 10661392
Alignment:
Q  206 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattac 305  Q
    |||||||||| || |||||| | ||||| |||| | |||||| ||||||||||||||||  ||| ||||||| |||||||||||| |||||||||||  |    
T  10661658 gatgacttttgcactgaaccacgcggtttggtttggtttgcg-tttgcatctcagcaaccaaactaaaccaaaccaaaccgcaaggataatgaatatatc 10661560  T
Q  306 ttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccat 402  Q
    ||||| |||||||||| | |||||||||||||||||| |||| ||||||||| |||||||||||||||   ||||| ||||||||||||||| ||||||     
T  10661559 ttaaacatgtactagcccgattacatagctcaagaattatcttttttgattcgattttttcattgttgtaccatcatgttcgattctaattcatttccaa 10661460  T
Q  403 ctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||    
T  10661459 ctctttcaattcatttccagtgaagaatttgtttcctttacttcccaataatttgtttcatgcttatg 10661392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 199 - 470
Target Start/End: Original strand, 18169596 - 18169865
Alignment:
Q  199 tgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatga 298  Q
    ||||| |||| |||||| || ||||||||  ||||||||| | ||||||||||||||||| ||| | |||||||| |||     || |||||||||||||    
T  18169596 tgattcggattacttttgcactgaaccgcgtggttcggtttggtttgcggtttgcatctcggcagccgaaccaaatcaa-----actgcaagaataatga 18169690  T
Q  299 atattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcc 395  Q
    |||||||||||| |||||||||| |||||||||| |||||||||||||||| | ||||| |||||| |||| |||||   ||||||| ||||||||||||    
T  18169691 atattacttaaacatgtactagcccaattacatacctcaagaataatctctatcgattcgatttttccattattgcaccatcaggtttgattctaattcc 18169790  T
Q  396 tttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  18169791 tttccatctctttcaattcatttccagtgatgaatttgtttcctttacttgcaaataatttgtttcatgcttatg 18169865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 199 - 470
Target Start/End: Original strand, 18633162 - 18633431
Alignment:
Q  199 tgatttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatga 298  Q
    ||||| |||| |||||| || ||||||||  ||||||||| | ||||||||||||||||| ||| | |||||||| |||     || |||||||||||||    
T  18633162 tgattcggattacttttgcactgaaccgcgtggttcggtttggtttgcggtttgcatctcggcagccgaaccaaatcaa-----actgcaagaataatga 18633256  T
Q  299 atattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcc 395  Q
    |||||||||||| |||||||||| |||||||||| |||||||||||||||| | ||||| |||||| |||| |||||   ||||||| ||||||||||||    
T  18633257 atattacttaaacatgtactagcccaattacatacctcaagaataatctctatcgattcgatttttccattattgcaccatcaggtttgattctaattcc 18633356  T
Q  396 tttccatctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  18633357 tttccatctctttcaattcatttccagtgatgaatttgtttcctttacttgcaaataatttgtttcatgcttatg 18633431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 234 - 462
Target Start/End: Complemental strand, 33069075 - 33068844
Alignment:
Q  234 cggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatag 333  Q
    ||||| |||||||||||||||||| |||||| ||||||||| || ||||||| ||| |||||| |||||||||||||| ||||| ||| ||||||||||     
T  33069075 cggtttgatttgcggtttgcatcttagcaaccgaaccaaacgaaaccaaaccacaaaaataatcaatattacttaaatttgtaccagcccaattacataa 33068976  T
Q  334 ctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaat 430  Q
    |||||||||||||||||||||||  |||||| ||||||||   |||||  |||||||||||||||||| ||| || |||||||||||| |||||||||||    
T  33068975 ctcaagaataatctcttttgatttgatttttccattgttgcaccatcaaattcgattctaattccttttcatttccttcaattcattttcagtgatgaat 33068876  T
Q  431 ttgtttcctttactttccaataatttgtttca 462  Q
    || |||||||| ||| ||||||||||||||||    
T  33068875 ttatttccttttcttcccaataatttgtttca 33068844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 205 - 464
Target Start/End: Complemental strand, 3682425 - 3682169
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| || |||||||| ||||| |||| | ||||||||||||||||||||||| ||||||||||||     ||||||||||||||||||||||    
T  3682425 ggatgacttttccactgaaccgcgcggtttggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaa-----accgcaagaataatgaatatta 3682331  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgtt---gcatcaggttcgattctaattcctttcca 401  Q
    | |||| |||||||||| |||||||||| |  |||||||||||||||||||||||||||| |||| ||    |||||||||| ||||||||| ||| |||    
T  3682330 cctaaacatgtactagcccaattacataacctaagaataatctcttttgattcaatttttccatttttccaccatcaggttcaattctaatttcttacca 3682231  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatg 464  Q
    ||| |||||||||| ||||| ||| ||||||||||| ||| ||| ||||||| ||||||||||    
T  3682230 tctatttcaattca-ttccactgacgaatttgtttcattttcttcccaataacttgtttcatg 3682169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 209 - 464
Target Start/End: Original strand, 36909923 - 36910165
Alignment:
Q  209 gacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatattactta 308  Q
    ||||||| || ||||| || |||||||||||| ||||||||||||||||||| ||| |||||| |||||     ||||||||||||||||||||          
T  36909923 gacttttgcattgaactgcgcggttcggttcggtttgcggtttgcatctcaggaaccgaaccataccaa-----accgcaagaataatgaatat------ 36910011  T
Q  309 aatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca---tcaggttcgattctaattcctttccatctc 405  Q
       |||||||||| ||||||||| ||||||||||||||| ||||||||| |||||| ||||||||||   ||||||| ||||||||||| ||||||||||    
T  36910012 ---atgtactagcccaattacat-gctcaagaataatct-ttttgattccatttttccattgttgcaccatcaggtttgattctaattcatttccatctc 36910106  T
Q  406 tttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatg 464  Q
    ||||||||||||| | ||||||||||| |||||||||||| ||||||||||||||||||    
T  36910107 tttcaattcattttcggtgatgaatttatttcctttacttcccaataatttgtttcatg 36910165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 205 - 369
Target Start/End: Complemental strand, 44673236 - 44673068
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| || |||||||| |||||||||| | ||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  44673236 ggatgacttttgcactgaaccgcgcggttcggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaactgcaagaataatgaatatta 44673137  T
Q  305 cttaaatatgtactagctcaat----tacatagctcaagaataatctcttttgattcaattttttcatt 369  Q
    |||||| |||||||||| ||||    |||||||||||| ||||||  ||||||||| ||||||||||||    
T  44673136 cttaaacatgtactagcccaattacatacatagctcaataataattgcttttgatttaattttttcatt 44673068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 205 - 376
Target Start/End: Original strand, 6200507 - 6200678
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| || |||| ||  |||||  ||||| |||  ||||||||||| ||||||  ||||||||||| ||||||||||||||||||||||||||    
T  6200507 ggatgacttttgcactgaatcgtgcggtttcgttcggtttttggtttgcatcttagcaaccaaaccaaaccaaaccaaaccgcaagaataatgaatatta 6200606  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgcat 376  Q
    || ||| |||||||||| |||||||||| | |||||||||||||||||||||| |||||| |||||||||||    
T  6200607 ctgaaacatgtactagcccaattacataacccaagaataatctcttttgattcgatttttccattgttgcat 6200678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 206 - 277
Target Start/End: Original strand, 5802528 - 5802599
Alignment:
Q  206 gatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaa 277  Q
    ||||||||||| | |||||||| |||||||||||| |||||||||||||||||||||||  |||||||||||    
T  5802528 gatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccaaaccaaaccaa 5802599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 234 - 285
Target Start/End: Original strand, 3006232 - 3006283
Alignment:
Q  234 cggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaacc 285  Q
    ||||||| ||||||||||||||||||||||| |||||||||||| |||||||    
T  3006232 cggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaacc 3006283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 304
Target Start/End: Original strand, 42496467 - 42496565
Alignment:
Q  201 atttggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaat 300  Q
    ||||| |||| |||| || |||||||||||||||||||||||||| | |||  |||| | |||  ||||||||      |||||||||||||||||||||    
T  42496467 atttgaatgatttttgcactgaaccgcacggttcggttcgatttgtgatttatatcttaacaatcgaaccaaa-----tcaaaccgcaagaataatgaat 42496561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 462
Target Start/End: Complemental strand, 44673073 - 44673023
Alignment:
Q  412 ttcatttccagtgatgaatttgtttcctttactttccaataatttgtttca 462  Q
    ||||||| ||||||||||||||||| |||||||| | | ||||||||||||    
T  44673073 ttcattttcagtgatgaatttgttttctttacttccaagtaatttgtttca 44673023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 167; Significance: 3e-89; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 205 - 470
Target Start/End: Original strand, 69106 - 69374
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| ||||||||||| |||||||||| | ||||||||||||||||||||||| ||||||||||||  ||| |||||||||||||||||||||    
T  69106 ggatgacttttgcaatgaaccgcgcggttcggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaaaacaacccgcaagaataatgaatatta 69205  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 401  Q
    |||||| ||||||||||  ||||||||||| ||| |||||||||||||||||| |||||| ||||||||   |||||  |||||||||||||||||||||    
T  69206 cttaaacatgtactagcctaattacatagcccaataataatctcttttgattcgatttttccattgttgcaccatcaaattcgattctaattcctttcca 69305  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    ||||||||||||||||||||||||| |||||||||| ||| ||| ||||||||||||||||||| ||||    
T  69306 tctctttcaattcatttccagtgataaatttgtttcattttcttcccaataatttgtttcatgcttatg 69374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 205 - 375
Target Start/End: Original strand, 77212 - 77382
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| ||||||||||| |||||||||| | ||||||||||||||||||||||| ||||||||||||  ||| |||||||||||||||||||||    
T  77212 ggatgacttttgcaatgaaccgcgcggttcggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaaaacaacccgcaagaataatgaatatta 77311  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttgca 375  Q
    |||||| ||||||||||  ||||||||||| ||| ||||||| |||||||||| |||||| ||||||||||    
T  77312 cttaaacatgtactagcctaattacatagcccaataataatcacttttgattcgatttttccattgttgca 77382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 140; Significance: 4e-73; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 205 - 470
Target Start/End: Complemental strand, 106547 - 106278
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| ||||||||||| |||||||||| | |||||||||||||||||| |||| |||||||||| | |||| |||||||||||||||||||||    
T  106547 ggatgacttttgcaatgaaccgcgcggttcggtttggtttgcggtttgcatctcaacaaccgaaccaaacccaaccaacccgcaagaataatgaatatta 106448  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 401  Q
    |||||| ||||||||||  |||||||||||  || |||||| |||||| |||| |||||| ||||||||   |||||  |||||||||||||||||||||    
T  106447 cttaaacatgtactagcctaattacatagcctaataataatttctttttattcgatttttccattgttgcaccatcaaattcgattctaattcctttcca 106348  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttc-ctttactttccaataatttgtttcatgcctatg 470  Q
    ||||||||||||||||||||||||| ||||||||||  ||| ||| | ||||||||||||||||| ||||    
T  106347 tctctttcaattcatttccagtgataaatttgtttcatttttcttccgaataatttgtttcatgcttatg 106278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 267 - 470
Target Start/End: Complemental strand, 129092 - 128885
Alignment:
Q  267 aaccaaaccaagccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttc 366  Q
    ||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||  ||||||||||| ||| ||||||||||||  |||| |||||| |    
T  129092 aaccaaaccaaaccaacccgcaagaataatgaatattacttaaacatgtactagcctaattacatagcccaataataatctctttatattcgatttttcc 128993  T
Q  367 attgttg---catcaggttcgattctaattcctttccatctctttcaattcatttccagtgatgaatttgtttc-ctttactttccaataatttgtttca 462  Q
    |||||||   |||||  |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  ||| ||| ||||||||||||||||    
T  128992 attgttgcaccatcaaattcgattctaattcctttccatctctttcaattcattttcagtgataaatttgtttcatttttcttcccaataatttgtttca 128893  T
Q  463 tgcctatg 470  Q
    ||| ||||    
T  128892 tgcttatg 128885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 139; Significance: 2e-72; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 205 - 470
Target Start/End: Original strand, 40145 - 40413
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| || ||||||||  || |||||| | |||| ||||| ||||||| |||| |||||||||||| ||||||| ||||||||||||||||||    
T  40145 ggatgacttttgcactgaaccgcgtggctcggtttggtttgtggttttcatctcaacaaccgaaccaaaccaaaccaaaccacaagaataatgaatatta 40244  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 401  Q
    |||||| || ||||||| ||||||||||||||||||||||| |||||||||||||||| | ||||||||   |||||||||| |||||||||  ||||||    
T  40245 cttaaacatctactagcccaattacatagctcaagaataatttcttttgattcaatttgtccattgttgcaacatcaggttccattctaatttatttcca 40344  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttcctttactttccaataatttgtttcatgcctatg 470  Q
    |||||||||||||||||| |||||||||||| ||| |||||||| || ||||||||||| |||| ||||    
T  40345 tctctttcaattcatttcaagtgatgaatttatttactttacttccccataatttgtttaatgcttatg 40413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 205 - 442
Target Start/End: Original strand, 47341 - 47581
Alignment:
Q  205 ggatgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaataatgaatatta 304  Q
    ||||||||||| || ||||||||| || |||||| | |||| ||||| ||||||| |||| |||||||||||| ||||||| ||||||||||||||||||    
T  47341 ggatgacttttgcactgaaccgcatggctcggtttggtttgtggttttcatctcaacaaccgaaccaaaccaaaccaaaccacaagaataatgaatatta 47440  T
Q  305 cttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcaattttttcattgttg---catcaggttcgattctaattcctttcca 401  Q
    |||||| || ||||||| ||||||||||||||||||||||| ||||||||||| |||| | ||||||||   |||||||||| |||||||||  ||||||    
T  47441 cttaaacatctactagcccaattacatagctcaagaataatttcttttgattcgatttgtccattgttgcaacatcaggttccattctaatttatttcca 47540  T
Q  402 tctctttcaattcatttccagtgatgaatttgtttccttta 442  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  47541 tctctttcaattcatttcaagtgatgaatttgtttacttta 47581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 5490 - 5577
Alignment:
Q  207 atgacttttacaatgaaccgcacggttcggttcgatttgcggtttgcatctcagcaactgaaccaaaccaagccaaaccgcaagaata 294  Q
    |||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  5490 atgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaata 5577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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