View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1698_low_38 (Length: 234)

Name: NF1698_low_38
Description: NF1698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1698_low_38
NF1698_low_38
[»] chr8 (62 HSPs)
chr8 (1-234)||(35397219-35397461)
chr8 (75-234)||(40530146-40530304)
chr8 (93-234)||(17155313-17155459)
chr8 (75-234)||(25100800-25100961)
chr8 (75-234)||(35159533-35159697)
chr8 (93-215)||(20696644-20696769)
chr8 (109-231)||(25099537-25099662)
chr8 (109-207)||(38745405-38745503)
chr8 (117-234)||(39734674-39734796)
chr8 (75-234)||(285107-285268)
chr8 (75-234)||(630609-630770)
chr8 (75-234)||(816421-816582)
chr8 (75-197)||(43800066-43800191)
chr8 (75-234)||(17123314-17123472)
chr8 (93-197)||(14912452-14912559)
chr8 (93-195)||(5838953-5839058)
chr8 (95-226)||(3153745-3153875)
chr8 (109-197)||(22215805-22215893)
chr8 (111-234)||(36859901-36860029)
chr8 (109-234)||(5575248-5575380)
chr8 (75-197)||(41669554-41669679)
chr8 (109-214)||(40210434-40210539)
chr8 (111-211)||(45237219-45237320)
chr8 (81-208)||(12209363-12209486)
chr8 (81-208)||(12453791-12453914)
chr8 (113-211)||(19142215-19142313)
chr8 (109-202)||(24803956-24804050)
chr8 (109-211)||(31641339-31641441)
chr8 (109-211)||(38362557-38362659)
chr8 (109-209)||(35020966-35021066)
chr8 (60-207)||(38760201-38760350)
chr8 (75-201)||(42353088-42353218)
chr8 (93-207)||(32175678-32175795)
chr8 (111-204)||(11687308-11687401)
chr8 (109-202)||(41670274-41670367)
chr8 (109-208)||(18146891-18146990)
chr8 (117-208)||(31719391-31719483)
chr8 (97-202)||(3513020-3513129)
chr8 (111-169)||(2772252-2772310)
chr8 (109-202)||(42803783-42803877)
chr8 (117-202)||(17911970-17912055)
chr8 (109-201)||(40532574-40532666)
chr8 (75-208)||(41356829-41356958)
chr8 (75-201)||(43874506-43874628)
chr8 (109-202)||(45236253-45236346)
chr8 (109-209)||(34900217-34900317)
chr8 (117-208)||(35252499-35252591)
chr8 (75-202)||(16785954-16786078)
chr8 (75-208)||(45069227-45069363)
chr8 (109-201)||(25133741-25133834)
chr8 (75-208)||(39103592-39103721)
chr8 (75-201)||(4477031-4477160)
chr8 (75-189)||(16785756-16785867)
chr8 (115-208)||(29050611-29050705)
chr8 (112-202)||(34618446-34618536)
chr8 (117-206)||(41356157-41356247)
chr8 (112-201)||(5964679-5964768)
chr8 (149-209)||(35011116-35011176)
chr8 (134-178)||(38604622-38604666)
chr8 (148-219)||(43150776-43150847)
chr8 (124-207)||(3890735-3890818)
chr8 (114-202)||(35056745-35056833)
[»] chr6 (23 HSPs)
chr6 (75-232)||(22707973-22708132)
chr6 (109-234)||(18368907-18369035)
chr6 (109-234)||(20646340-20646470)
chr6 (109-234)||(24118506-24118634)
chr6 (93-234)||(12131145-12131296)
chr6 (75-202)||(32986227-32986350)
chr6 (75-197)||(25022239-25022357)
chr6 (109-197)||(13755615-13755703)
chr6 (109-211)||(32561731-32561833)
chr6 (111-197)||(5956985-5957071)
chr6 (109-209)||(32560589-32560689)
chr6 (109-211)||(13868002-13868104)
chr6 (112-209)||(21527526-21527623)
chr6 (109-208)||(18802257-18802356)
chr6 (117-208)||(31603371-31603463)
chr6 (75-208)||(1790336-1790472)
chr6 (109-208)||(4977069-4977168)
chr6 (111-202)||(14856179-14856271)
chr6 (75-130)||(22708114-22708172)
chr6 (109-197)||(24160009-24160097)
chr6 (109-208)||(31259003-31259102)
chr6 (109-207)||(20525983-20526081)
chr6 (148-208)||(191470-191529)
[»] chr5 (41 HSPs)
chr5 (75-234)||(34589168-34589336)
chr5 (93-234)||(27812316-27812460)
chr5 (109-234)||(15499326-15499453)
chr5 (109-234)||(29524646-29524774)
chr5 (75-234)||(22777864-22778027)
chr5 (75-228)||(6788865-6789018)
chr5 (109-234)||(37530027-37530155)
chr5 (93-234)||(36761799-36761946)
chr5 (110-230)||(42709971-42710096)
chr5 (78-234)||(12282305-12282463)
chr5 (109-214)||(11783509-11783614)
chr5 (93-230)||(41733576-41733719)
chr5 (109-226)||(16217630-16217748)
chr5 (93-214)||(23591340-23591464)
chr5 (97-197)||(35639489-35639592)
chr5 (111-197)||(24172061-24172147)
chr5 (129-214)||(12939071-12939156)
chr5 (129-214)||(12953156-12953241)
chr5 (109-197)||(77063-77151)
chr5 (75-197)||(7614287-7614419)
chr5 (109-211)||(5102123-5102225)
chr5 (93-197)||(7156748-7156856)
chr5 (109-213)||(24464269-24464372)
chr5 (109-209)||(37252647-37252747)
chr5 (109-169)||(42423381-42423441)
chr5 (109-211)||(8524542-8524644)
chr5 (110-211)||(15525025-15525126)
chr5 (109-213)||(15526187-15526291)
chr5 (79-211)||(4558869-4559005)
chr5 (93-208)||(13019541-13019659)
chr5 (77-207)||(11576122-11576256)
chr5 (109-211)||(3034684-3034787)
chr5 (109-202)||(7947863-7947956)
chr5 (111-169)||(36944158-36944216)
chr5 (109-207)||(41356790-41356889)
chr5 (75-208)||(1924459-1924588)
chr5 (109-208)||(20768319-20768418)
chr5 (132-202)||(35767108-35767179)
chr5 (134-169)||(36960246-36960281)
chr5 (114-209)||(2890390-2890485)
chr5 (157-211)||(3747172-3747226)
[»] chr4 (62 HSPs)
chr4 (75-234)||(19801107-19801272)
chr4 (112-234)||(47633173-47633295)
chr4 (75-234)||(6244942-6245109)
chr4 (93-214)||(39839424-39839548)
chr4 (109-234)||(53284653-53284782)
chr4 (93-214)||(37113654-37113778)
chr4 (109-234)||(49334502-49334630)
chr4 (109-214)||(33984768-33984873)
chr4 (109-234)||(44449110-44449241)
chr4 (93-234)||(19802494-19802641)
chr4 (93-234)||(43375286-43375436)
chr4 (93-234)||(2942943-2943086)
chr4 (117-220)||(45559969-45560072)
chr4 (93-214)||(36180664-36180788)
chr4 (109-214)||(32013063-32013168)
chr4 (89-192)||(54999396-54999502)
chr4 (78-196)||(55345375-55345496)
chr4 (93-213)||(55900375-55900498)
chr4 (93-201)||(40675356-40675467)
chr4 (109-211)||(43939428-43939530)
chr4 (97-213)||(317887-318006)
chr4 (109-211)||(51942443-51942545)
chr4 (109-214)||(26188836-26188943)
chr4 (93-211)||(20530433-20530554)
chr4 (109-211)||(10658001-10658103)
chr4 (109-211)||(10872146-10872248)
chr4 (109-207)||(24153241-24153339)
chr4 (109-203)||(49647870-49647964)
chr4 (109-211)||(51941665-51941766)
chr4 (89-208)||(31998377-31998499)
chr4 (109-211)||(10656842-10656944)
chr4 (109-211)||(10870987-10871089)
chr4 (93-201)||(25697515-25697627)
chr4 (97-197)||(48057958-48058061)
chr4 (109-230)||(49646691-49646812)
chr4 (109-208)||(19914124-19914223)
chr4 (109-197)||(31220646-31220734)
chr4 (112-211)||(2389766-2389865)
chr4 (109-180)||(27536976-27537047)
chr4 (109-208)||(30654053-30654152)
chr4 (108-202)||(21234119-21234213)
chr4 (148-214)||(26919341-26919407)
chr4 (109-201)||(30410699-30410791)
chr4 (109-211)||(25421291-25421393)
chr4 (89-202)||(45109042-45109156)
chr4 (93-201)||(47093498-47093610)
chr4 (111-169)||(53443732-53443790)
chr4 (111-208)||(55611212-55611309)
chr4 (124-201)||(7895958-7896035)
chr4 (93-208)||(45550199-45550317)
chr4 (112-209)||(52575449-52575546)
chr4 (109-208)||(28460161-28460260)
chr4 (117-207)||(41579554-41579645)
chr4 (148-202)||(37498766-37498819)
chr4 (148-197)||(50791808-50791857)
chr4 (122-174)||(26920154-26920206)
chr4 (115-163)||(30649908-30649956)
chr4 (109-207)||(38006114-38006213)
chr4 (148-194)||(6288394-6288440)
chr4 (117-202)||(44587645-44587730)
chr4 (109-169)||(51930201-51930262)
chr4 (112-164)||(34440116-34440168)
[»] chr1 (49 HSPs)
chr1 (75-234)||(30358727-30358892)
chr1 (110-234)||(50585526-50585654)
chr1 (109-234)||(39326257-39326387)
chr1 (76-234)||(36740167-36740331)
chr1 (109-234)||(11824232-11824363)
chr1 (58-214)||(12015366-12015525)
chr1 (93-231)||(3569667-3569812)
chr1 (109-234)||(12769898-12770026)
chr1 (75-197)||(45900822-45900954)
chr1 (109-215)||(47325885-47325991)
chr1 (112-234)||(38624732-38624854)
chr1 (109-202)||(1189428-1189521)
chr1 (108-193)||(46311979-46312064)
chr1 (93-197)||(27748290-27748397)
chr1 (77-211)||(38059203-38059341)
chr1 (109-213)||(31497175-31497279)
chr1 (109-209)||(38814906-38815005)
chr1 (109-202)||(28954866-28954956)
chr1 (121-211)||(2458390-2458480)
chr1 (109-211)||(4639437-4639539)
chr1 (75-211)||(9224388-9224520)
chr1 (115-211)||(11756181-11756277)
chr1 (93-208)||(31656904-31657022)
chr1 (93-211)||(3795392-3795513)
chr1 (75-208)||(42627651-42627787)
chr1 (109-211)||(4639060-4639162)
chr1 (93-201)||(27668201-27668312)
chr1 (93-207)||(34086769-34086887)
chr1 (75-211)||(42330726-42330859)
chr1 (93-208)||(4513589-4513707)
chr1 (75-205)||(5675208-5675348)
chr1 (109-208)||(38667735-38667834)
chr1 (75-202)||(35180373-35180496)
chr1 (116-177)||(4360152-4360214)
chr1 (111-169)||(28344654-28344712)
chr1 (111-208)||(39324967-39325064)
chr1 (109-217)||(14390960-14391068)
chr1 (149-202)||(44277444-44277497)
chr1 (109-175)||(18544734-18544801)
chr1 (109-208)||(5699059-5699158)
chr1 (137-201)||(9422487-9422551)
chr1 (75-202)||(25366322-25366452)
chr1 (111-207)||(50939579-50939674)
chr1 (109-175)||(20470180-20470247)
chr1 (109-195)||(18034220-18034306)
chr1 (117-202)||(41865838-41865924)
chr1 (148-197)||(44299322-44299371)
chr1 (149-201)||(40942418-40942470)
chr1 (153-201)||(46743008-46743056)
[»] chr3 (62 HSPs)
chr3 (75-234)||(30317238-30317393)
chr3 (75-234)||(8320719-8320880)
chr3 (93-214)||(8880075-8880199)
chr3 (93-234)||(36238531-36238681)
chr3 (109-234)||(34435298-34435426)
chr3 (109-214)||(1362391-1362496)
chr3 (93-234)||(35406241-35406390)
chr3 (109-234)||(30741157-30741286)
chr3 (109-234)||(51063533-51063660)
chr3 (109-234)||(41990961-41991089)
chr3 (93-231)||(2557162-2557306)
chr3 (124-214)||(17667472-17667562)
chr3 (93-197)||(52184293-52184400)
chr3 (93-197)||(54462731-54462838)
chr3 (93-197)||(19275779-19275882)
chr3 (109-198)||(7042400-7042489)
chr3 (110-211)||(42878468-42878569)
chr3 (110-197)||(51761570-51761657)
chr3 (117-207)||(54598751-54598842)
chr3 (111-208)||(46115577-46115675)
chr3 (111-208)||(46116244-46116342)
chr3 (109-197)||(50937578-50937666)
chr3 (93-211)||(25998443-25998564)
chr3 (75-207)||(5506536-5506672)
chr3 (109-211)||(43861397-43861499)
chr3 (109-211)||(48072699-48072801)
chr3 (108-197)||(6125453-6125542)
chr3 (109-217)||(45355819-45355928)
chr3 (89-202)||(4071394-4071508)
chr3 (93-208)||(38732703-38732821)
chr3 (75-208)||(40373928-40374057)
chr3 (109-200)||(2228545-2228636)
chr3 (75-208)||(6586822-6586958)
chr3 (75-195)||(12765181-12765305)
chr3 (144-202)||(23091111-23091169)
chr3 (109-202)||(32999114-32999208)
chr3 (134-210)||(35555087-35555162)
chr3 (75-208)||(36659555-36659691)
chr3 (84-194)||(39130739-39130852)
chr3 (109-211)||(50936424-50936525)
chr3 (112-197)||(22978726-22978811)
chr3 (75-208)||(46668891-46669020)
chr3 (109-208)||(35324255-35324354)
chr3 (109-201)||(42166645-42166737)
chr3 (109-211)||(7475187-7475289)
chr3 (138-197)||(20585704-20585763)
chr3 (110-208)||(36807474-36807572)
chr3 (112-197)||(45355604-45355689)
chr3 (111-162)||(51981591-51981642)
chr3 (75-211)||(12122311-12122450)
chr3 (136-197)||(36545320-36545381)
chr3 (136-197)||(36562933-36562994)
chr3 (148-201)||(52959901-52959954)
chr3 (117-208)||(32111013-32111104)
chr3 (117-208)||(32389572-32389663)
chr3 (148-208)||(50197388-50197448)
chr3 (148-199)||(43967201-43967252)
chr3 (112-175)||(47133474-47133537)
chr3 (148-195)||(48747941-48747988)
chr3 (77-173)||(12121579-12121679)
chr3 (148-202)||(42218282-42218336)
chr3 (75-107)||(51761670-51761702)
[»] chr2 (46 HSPs)
chr2 (75-234)||(7455179-7455346)
chr2 (77-234)||(36935338-36935499)
chr2 (93-234)||(36985930-36986079)
chr2 (75-214)||(38325002-38325144)
chr2 (89-207)||(18240035-18240155)
chr2 (111-215)||(42520473-42520577)
chr2 (108-234)||(14958761-14958885)
chr2 (109-234)||(1875296-1875424)
chr2 (93-234)||(10034288-10034437)
chr2 (70-202)||(5774778-5774920)
chr2 (109-234)||(16495898-16496028)
chr2 (93-234)||(30524314-30524462)
chr2 (111-234)||(34245997-34246122)
chr2 (75-202)||(15264766-15264896)
chr2 (117-214)||(39239898-39239995)
chr2 (119-234)||(8876326-8876444)
chr2 (109-211)||(6321352-6321454)
chr2 (109-211)||(14454116-14454218)
chr2 (109-211)||(33179618-33179720)
chr2 (109-202)||(18247380-18247473)
chr2 (110-207)||(45377465-45377562)
chr2 (93-203)||(37241743-37241857)
chr2 (114-214)||(43569048-43569147)
chr2 (109-202)||(42097411-42097505)
chr2 (109-202)||(6320197-6320290)
chr2 (75-208)||(11447789-11447919)
chr2 (109-209)||(14452949-14453049)
chr2 (93-211)||(18109141-18109262)
chr2 (109-201)||(33180778-33180872)
chr2 (109-201)||(7453960-7454052)
chr2 (77-207)||(239941-240075)
chr2 (93-211)||(1086582-1086703)
chr2 (75-180)||(35422596-35422705)
chr2 (117-207)||(6432948-6433038)
chr2 (115-208)||(40861656-40861749)
chr2 (110-208)||(26339459-26339557)
chr2 (148-211)||(38245414-38245477)
chr2 (121-201)||(40789550-40789631)
chr2 (109-201)||(39532616-39532708)
chr2 (110-207)||(10245721-10245818)
chr2 (118-197)||(28021101-28021182)
chr2 (112-201)||(3147986-3148075)
chr2 (148-208)||(7182770-7182829)
chr2 (109-172)||(8340595-8340659)
chr2 (110-202)||(30219081-30219173)
chr2 (148-208)||(32481734-32481793)
[»] chr7 (74 HSPs)
chr7 (75-217)||(29993341-29993486)
chr7 (93-214)||(48312823-48312947)
chr7 (109-234)||(46536773-46536900)
chr7 (75-234)||(27827407-27827564)
chr7 (109-234)||(28493553-28493682)
chr7 (112-234)||(46614956-46615079)
chr7 (75-214)||(42264551-42264686)
chr7 (93-214)||(43338333-43338457)
chr7 (75-234)||(46673296-46673462)
chr7 (109-234)||(42327435-42327567)
chr7 (90-234)||(46350109-46350252)
chr7 (97-234)||(6244523-6244666)
chr7 (117-214)||(4061307-4061404)
chr7 (111-234)||(31031282-31031406)
chr7 (75-234)||(42328314-42328475)
chr7 (78-234)||(43157940-43158088)
chr7 (117-209)||(46330339-46330431)
chr7 (109-234)||(31226213-31226329)
chr7 (109-197)||(28957439-28957527)
chr7 (75-175)||(35648125-35648228)
chr7 (76-211)||(42326997-42327135)
chr7 (109-210)||(43544215-43544316)
chr7 (109-169)||(43002582-43002642)
chr7 (75-208)||(39869428-39869564)
chr7 (75-207)||(21920187-21920322)
chr7 (109-202)||(33980452-33980545)
chr7 (111-211)||(34821402-34821501)
chr7 (89-211)||(46733158-46733283)
chr7 (93-202)||(3371006-3371119)
chr7 (110-201)||(47253519-47253610)
chr7 (109-202)||(33981596-33981689)
chr7 (75-208)||(37657533-37657662)
chr7 (93-208)||(40061704-40061822)
chr7 (109-230)||(42831835-42831956)
chr7 (109-197)||(595477-595565)
chr7 (109-208)||(9806043-9806142)
chr7 (108-207)||(42832981-42833080)
chr7 (75-202)||(44819260-44819384)
chr7 (109-211)||(585203-585305)
chr7 (93-201)||(42980369-42980480)
chr7 (93-217)||(46535958-46536086)
chr7 (109-201)||(30583223-30583315)
chr7 (93-208)||(31620056-31620174)
chr7 (93-208)||(35669797-35669915)
chr7 (109-174)||(36122054-36122119)
chr7 (76-162)||(46535306-46535388)
chr7 (75-206)||(46899213-46899348)
chr7 (109-169)||(982258-982318)
chr7 (149-217)||(3116381-3116449)
chr7 (110-202)||(38226103-38226195)
chr7 (109-197)||(41407656-41407744)
chr7 (109-208)||(41833126-41833225)
chr7 (75-211)||(44103976-44104109)
chr7 (111-208)||(43467460-43467557)
chr7 (109-210)||(1600645-1600745)
chr7 (117-201)||(6477468-6477553)
chr7 (93-165)||(43154408-43154483)
chr7 (109-201)||(44571445-44571538)
chr7 (109-211)||(47252749-47252842)
chr7 (89-208)||(23357428-23357550)
chr7 (147-208)||(31968967-31969027)
chr7 (93-208)||(34307672-34307790)
chr7 (132-197)||(36821327-36821392)
chr7 (151-207)||(21261908-21261964)
chr7 (111-197)||(42698168-42698255)
chr7 (1-55)||(11374956-11375010)
chr7 (148-202)||(46347391-46347445)
chr7 (109-197)||(31029899-31029986)
chr7 (109-208)||(35669070-35669169)
chr7 (148-208)||(42329146-42329205)
chr7 (109-211)||(46159520-46159620)
chr7 (117-163)||(42262925-42262971)
chr7 (75-128)||(42831243-42831299)
chr7 (75-208)||(31435694-31435823)
[»] scaffold0464 (1 HSPs)
scaffold0464 (109-234)||(5315-5443)
[»] scaffold0330 (1 HSPs)
scaffold0330 (109-234)||(7669-7796)
[»] scaffold0325 (1 HSPs)
scaffold0325 (109-212)||(19047-19150)
[»] scaffold0014 (1 HSPs)
scaffold0014 (109-211)||(70832-70934)
[»] scaffold0115 (1 HSPs)
scaffold0115 (111-208)||(14250-14347)
[»] scaffold0039 (1 HSPs)
scaffold0039 (93-174)||(76876-76960)
[»] scaffold0076 (1 HSPs)
scaffold0076 (77-137)||(14121-14184)


Alignment Details
Target: chr8 (Bit Score: 169; Significance: 9e-91; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 35397219 - 35397461
Alignment:
Q  1 caacttgaagattgtatttcaactgagacctaaatattggcctgagaagtggaaggctctgttcggtaaaaataagct----gatagctgaaaa--gcta 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    | ||||||| |   | ||    
T  35397219 caacttgaagattgtatttcaactgagacctaaatattggcctgagaagtggaaggttctgtttggtaaaaataagctataagttagctgatagctgata 35397318  T
Q  95 gctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaa 191  Q
    ||||||||| |||||   ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35397319 gctgatgacagatagctgatagcttatagttgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaa 35397418  T
Q  192 tgacataaaagaacatgttttttaatatacatatagacacaca 234  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  35397419 tgacataaaagaacatgttttttaatatacatatagacacaca 35397461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 75 - 234
Target Start/End: Complemental strand, 40530304 - 40530146
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagt 174  Q
    ||||||||||||||||||||||||||  ||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40530304 agctgatagctgaaaagctagctgatagct----gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagt 40530209  T
Q  175 ggctgagaagtataaaatgacataaaagaacatg---ttttttaatatacatatagacacaca 234  Q
    |||||| || |||||||||||||||||| |||||   ||||||||||||||||||||| ||||    
T  40530208 ggctgataaatataaaatgacataaaaggacatgtttttttttaatatacatatagacgcaca 40530146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 93 - 234
Target Start/End: Original strand, 17155313 - 17155459
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    |||||||||||||||||   ||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||    
T  17155313 tagctgatgactgatagctgataacttatagctgaaaagcttgcttattaaaaataatgggtttggtataattagctgttgaagtggctgataagtataa 17155412  T
Q  190 aatgacataaaagaacatg--ttttttaatatacatatagacacaca 234  Q
    ||||||||||||  |||||  ||||||||||||||||||||||||||    
T  17155413 aatgacataaaatgacatgttttttttaatatacatatagacacaca 17155459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 75 - 234
Target Start/End: Complemental strand, 25100961 - 25100800
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagt 174  Q
    |||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  25100961 agctgatagctgaaaagctagctgatgactgatag----cttatagctgaaaagcttgcttattaaaaataacgtgtttggtaaaattagttgttgaagt 25100866  T
Q  175 ggctgagaagtataaaatgacataaaagaa------catgttttttaatatacatatagacacaca 234  Q
    |||||| ||||||||||| |||||||||||        | ||||||||||||||||||||||||||    
T  25100865 ggctgataagtataaaataacataaaagaattttttttttttttttaatatacatatagacacaca 25100800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 75 - 234
Target Start/End: Original strand, 35159533 - 35159697
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgata---gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttga 171  Q
    ||||||||||||||||||||||||||  |||||    |||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  35159533 agctgatagctgaaaagctagctgatagctgatgactgataacttataactgaaaagcttgcttattaaaaataatgtgtttggtaaaattagttgttga 35159632  T
Q  172 agtggctgagaagtataaaatgacataaaagaac--atgttttttaatatacatatagacacaca 234  Q
    ||||||||| ||||||||||| ||||||||| ||   | ||||||||||||||||||||||||||    
T  35159633 agtggctgataagtataaaatcacataaaaggactttttttttttaatatacatatagacacaca 35159697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 93 - 215
Target Start/End: Original strand, 20696644 - 20696769
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    |||||||| ||||||||   |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  20696644 tagctgataactgatagctgatagcttatatctgaaaagcttggttattaaaaataatgtgtttggtaaaattagctgttgaagtggctaataagtataa 20696743  T
Q  190 aatgacataaaagaacatgtttttta 215  Q
    ||||||||||||||||||||||||||    
T  20696744 aatgacataaaagaacatgtttttta 20696769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 109 - 231
Target Start/End: Original strand, 25099537 - 25099662
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||| |||||    
T  25099537 gatagcttatagctgaaaagcttgtttattaaaaataatgtgtttggtaaaattagctgttgaagtagctgataaatataaaatgacataaaaggacatg 25099636  T
Q  209 ---ttttttaatatacatatagacac 231  Q
       |||||||||||||||||||||||    
T  25099637 tgtttttttaatatacatatagacac 25099662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 109 - 207
Target Start/End: Original strand, 38745405 - 38745503
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  38745405 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgacataaaaggacat 38745503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 117 - 234
Target Start/End: Complemental strand, 39734796 - 39734674
Alignment:
Q  117 atagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgtt-----t 211  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||     |    
T  39734796 atagctgaaaaacttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgacataaaaggacatgtttttttt 39734697  T
Q  212 tttaatatacatatagacacaca 234  Q
    |||||||||||||||||||||||    
T  39734696 tttaatatacatatagacacaca 39734674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 75 - 234
Target Start/End: Complemental strand, 285268 - 285107
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagt 174  Q
    ||||||||||||| ||||||||||||  ||||| ||   ||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||    
T  285268 agctgatagctgataagctagctgatagctgat-ga---cttatagctgaaaagtttgcttattaaaaatattgtgtttggtaaaatgagctgttgaagt 285173  T
Q  175 ggctgagaagtataaaatgacataaaagaacatg------ttttttaatatacatatagacacaca 234  Q
    |||||| ||||||||||||||||||||| |||||      ||||||||||||||||||||||||||    
T  285172 ggctgataagtataaaatgacataaaaggacatgtcttttttttttaatatacatatagacacaca 285107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 75 - 234
Target Start/End: Original strand, 630609 - 630770
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagt 174  Q
    ||||||||||||| ||||||||||||  ||||| ||   ||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||    
T  630609 agctgatagctgataagctagctgatagctgat-ga---cttatagctgaaaagtttgcttattaaaaatattgtgtttggtaaaatgagctgttgaagt 630704  T
Q  175 ggctgagaagtataaaatgacataaaagaacatg------ttttttaatatacatatagacacaca 234  Q
    |||||| ||||||||||||||||||||| |||||      ||||||||||||||||||||||||||    
T  630705 ggctgataagtataaaatgacataaaaggacatgtcttttttttttaatatacatatagacacaca 630770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 75 - 234
Target Start/End: Original strand, 816421 - 816582
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagt 174  Q
    ||||||||||||| ||||||||||||  ||||| ||   ||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||    
T  816421 agctgatagctgataagctagctgatagctgat-ga---cttatagctgaaaagtttgcttattaaaaatattgtgtttggtaaaatgagctgttgaagt 816516  T
Q  175 ggctgagaagtataaaatgacataaaagaacatg------ttttttaatatacatatagacacaca 234  Q
    |||||| ||||||||||||||||||||| |||||      ||||||||||||||||||||||||||    
T  816517 ggctgataagtataaaatgacataaaaggacatgtcttttttttttaatatacatatagacacaca 816582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 75 - 197
Target Start/End: Original strand, 43800066 - 43800191
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttga 171  Q
    ||||||||||||||||||||||||||  ||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43800066 agctgatagctgaaaagctagctgatagctggtagctgatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttga 43800165  T
Q  172 agtggctgagaagtataaaatgacat 197  Q
    ||||||||| || ||||||| |||||    
T  43800166 agtggctgataaatataaaaggacat 43800191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 75 - 234
Target Start/End: Complemental strand, 17123472 - 17123314
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagt 174  Q
    |||| |||||||||||||||||||||  ||||| ||   || |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  17123472 agctcatagctgaaaagctagctgatagctgat-ga---ctgatagctgaaaagtttgcttattaaaaataatgtgtttggtaaaattagttgttgaagt 17123377  T
Q  175 ggctgagaagtataaaatgacataaaagaacatg---ttttttaatatacatatagacacaca 234  Q
    || ||| ||||||||||||||||||||| | |||   ||||||||||||||||||||||||||    
T  17123376 ggttgataagtataaaatgacataaaaggatatgtttttttttaatatacatatagacacaca 17123314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 14912559 - 14912452
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    |||||||||||||||||   ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14912559 tagctgatgactgatagctgatagcttatagttgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataa 14912460  T
Q  190 aatgacat 197  Q
    ||||||||    
T  14912459 aatgacat 14912452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 93 - 195
Target Start/End: Complemental strand, 5839058 - 5838953
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    |||||||||||||||||   ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  5839058 tagctgatgactgatagctgataacttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtagctgataagtataa 5838959  T
Q  190 aatgac 195  Q
    ||||||    
T  5838958 aatgac 5838953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 95 - 226
Target Start/End: Original strand, 3153745 - 3153875
Alignment:
Q  95 gctgatgactgata---gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaa 191  Q
    ||||||||||||||   |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3153745 gctgatgactgataactgatagctt-tagctgaaaagcttgcttattaaaa-taatgtgtttggtaaaattagctgttgaagtggctgataagtataaaa 3153842  T
Q  192 tgacataaaagaacatgttttttaatatacatata 226  Q
    | ||||||||| |||  |||||||||||| |||||    
T  3153843 taacataaaaggaca--ttttttaatatatatata 3153875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 22215893 - 22215805
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacat 197  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  22215893 gatagtttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggttgataagtataaaatgacat 22215805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 111 - 234
Target Start/End: Complemental strand, 36860029 - 36859901
Alignment:
Q  111 tagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgtt 210  Q
    ||||| |||| |||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||  |||||||    
T  36860029 tagctgatagttgaaaaacttgtttattaaaaataatgtgtttggtaaaattaactgttgaagtggctgataagtataaaatgacataaaaagacatgtt 36859930  T
Q  211 -----ttttaatatacatatagacacaca 234  Q
         ||||||||||||||||||||||||    
T  36859929 tttttttttaatatacatatagacacaca 36859901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 5575380 - 5575248
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaaca-- 206  Q
    |||| ||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||      
T  5575380 gataacttatagttgaaaagtttgcttattaaaaataatatgtttggtaaaattagctgttgaagtggctgataagtataaaatgacataaaatgacatt 5575281  T
Q  207 -----tgttttttaatatacatatagacacaca 234  Q
         | ||||||||||||||||||||||||||    
T  5575280 tttttttttttttaatatacatatagacacaca 5575248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 75 - 197
Target Start/End: Complemental strand, 41669679 - 41669554
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgata---gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttga 171  Q
    ||||||||||||||||||||||| ||  |||||    |||||||||||| |||||| || ||||||||||||||||||||||||||||||||  ||||||    
T  41669679 agctgatagctgaaaagctagcttatagctgatgactgatagcttatagttgaaaaactcgcttattaaaaataatgtgtttggtaaaattaattgttga 41669580  T
Q  172 agtggctgagaagtataaaatgacat 197  Q
    ||| || || ||||||||||||||||    
T  41669579 agttgcagataagtataaaatgacat 41669554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 109 - 214
Target Start/End: Complemental strand, 40210539 - 40210434
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||||||||||||||||| || | ||||||||| ||| ||||||| ||||||||  ||||||||| ||||| ||||||||||||||||||||| |||||    
T  40210539 gatagcttatagctgaaaaactggtttattaaaattaaagtgtttgataaaattaattgttgaagtagctgataagtataaaatgacataaaaggacatg 40210440  T
Q  209 tttttt 214  Q
    ||||||    
T  40210439 tttttt 40210434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 111 - 211
Target Start/End: Original strand, 45237219 - 45237320
Alignment:
Q  111 tagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgt 209  Q
    ||||||||||||||||||||  |||||||||| |||  |||||||||||||||||||||||||||| |||| || ||| |||||||||||||| ||||||    
T  45237219 tagcttatagctgaaaagctaacttattaaaattaaaagtgtttggtaaaattagctgttgaagtgactgataaatattaaatgacataaaaggacatgt 45237318  T
Q  210 tt 211  Q
    ||    
T  45237319 tt 45237320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 81 - 208
Target Start/End: Complemental strand, 12209486 - 12209363
Alignment:
Q  81 tagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaat-aatgtgtttggtaaaattagctgttgaagtggctg 179  Q
    ||||||||||||||||||||  ||    |||||||||||||||||||| | ||| ||||||| | || |||||||||||||||||||||||||||| ||     
T  12209486 tagctgaaaagctagctgatagct----gatagcttatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttgaagtgact- 12209392  T
Q  180 agaagtataaaatgacataaaagaacatg 208  Q
    | || ||||||||||||||||||||||||    
T  12209391 ataaatataaaatgacataaaagaacatg 12209363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 81 - 208
Target Start/End: Complemental strand, 12453914 - 12453791
Alignment:
Q  81 tagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaat-aatgtgtttggtaaaattagctgttgaagtggctg 179  Q
    ||||||||||||||||||||  ||    |||||||||||||||||||| | ||| ||||||| | || |||||||||||||||||||||||||||| ||     
T  12453914 tagctgaaaagctagctgatagct----gatagcttatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttgaagtgact- 12453820  T
Q  180 agaagtataaaatgacataaaagaacatg 208  Q
    | || ||||||||||||||||||||||||    
T  12453819 ataaatataaaatgacataaaagaacatg 12453791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 19142215 - 19142313
Alignment:
Q  113 gcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgttt 211  Q
    ||||||||||||||||   | ||||||||| | | ||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||| ||||||||    
T  19142215 gcttatagctgaaaagaaggtttattaaaatttaagtgtttggtaaaattagttgttgaagttgctgataagtataaaatgacataaaaggacatgttt 19142313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 109 - 202
Target Start/End: Original strand, 24803956 - 24804050
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaa-ataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    |||||||||||||||||||| | ||||||||||| | || |||||||||||||||||||||| |||||||||| || ||||||||||| ||||||    
T  24803956 gatagcttatagctgaaaagttagcttattaaaataaaaagtgtttggtaaaattagctgttcaagtggctgataaatataaaatgacgtaaaag 24804050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 31641339 - 31641441
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||||||||||||||||| ||   ||||||||| | | ||||||||||||||||| ||||||||| ||||| ||||||||||| ||||||||| |||||    
T  31641339 gatagcttatagctgaaaaactgatttattaaaattgaagtgtttggtaaaattaggtgttgaagtagctgataagtataaaataacataaaaggacatg 31641438  T
Q  209 ttt 211  Q
    |||    
T  31641439 ttt 31641441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 38362659 - 38362557
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||| ||||||| | | ||||||||| | | |||||| |||||||||| |||||||||| |||| ||||||||||||||||||||| |||||    
T  38362659 gatagcttatagttgaaaagatggtttattaaaattgaagtgtttagtaaaattagatgttgaagtgactgataagtataaaatgacataaaaggacatg 38362560  T
Q  209 ttt 211  Q
    |||    
T  38362559 ttt 38362557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 109 - 209
Target Start/End: Complemental strand, 35021066 - 35020966
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||||||||| |||||||| |   || |||||| | | ||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  35021066 gatagcttatatctgaaaagatgatttgttaaaattgaagtgtttggtaaaattagctgttgaagtggctgataaatataaaatgacataaaagtacatg 35020967  T
Q  209 t 209  Q
    |    
T  35020966 t 35020966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 60 - 207
Target Start/End: Original strand, 38760201 - 38760350
Alignment:
Q  60 tgttcggtaaaaataagctgatagctgaaaagctagctgatgactgat---agatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggt 156  Q
    |||| ||||||||||||||  |||||||||| |||||| ||  |||||    ||||||||||||||||||| || ||||||||||| ||||| |||||||    
T  38760201 tgtttggtaaaaataagctattagctgaaaaactagcttatagctgatggctgatagcttatagctgaaaaactcgcttattaaaattaatgcgtttggt 38760300  T
Q  157 aaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
     ||||| | ||||||| || |||| || |||||||||||||||||| ||||    
T  38760301 -aaattggttgttgaaatgactgataaatataaaatgacataaaagtacat 38760350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 75 - 201
Target Start/End: Original strand, 42353088 - 42353218
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgat---agatagcttatagctg-aaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttg 170  Q
    ||||||||||||||||||||||| ||  |||||    ||||||||||||||| ||||||| ||||||||||| |||||||||||||||| || |  ||||    
T  42353088 agctgatagctgaaaagctagcttatagctgatggctgatagcttatagctgaaaaagctcgcttattaaaattaatgtgtttggtaaagttggtggttg 42353187  T
Q  171 aagtggctgagaagtataaaatgacataaaa 201  Q
    |||| ||||  || |||||||||||||||||    
T  42353188 aagttgctggtaaatataaaatgacataaaa 42353218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 207
Target Start/End: Complemental strand, 32175795 - 32175678
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    |||||||||||||||||   ||||||||||||||||||||||||| ||| ||| ||| ||||||||||||||||| | |||||||  || | || |||||    
T  32175795 tagctgatgactgatagcttatagcttatagctgaaaagcttgctgatttaaattaaagtgtttggtaaaattagattttgaagttactaaaaaatataa 32175696  T
Q  190 aatgacataaaagaacat 207  Q
    |||||| |||||| ||||    
T  32175695 aatgacttaaaagtacat 32175678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 111 - 204
Target Start/End: Complemental strand, 11687401 - 11687308
Alignment:
Q  111 tagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaa 204  Q
    ||||| ||||||||||| || ||||||||||| ||| |||||| |||||||||| ||||||| || |||| || ||||||||||||||||||||    
T  11687401 tagctgatagctgaaaatctagcttattaaaattaaagtgtttagtaaaattagttgttgaaatgactgataaatataaaatgacataaaagaa 11687308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 109 - 202
Target Start/End: Complemental strand, 41670367 - 41670274
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    |||||||||||| ||||| | | | ||||||||| | |  |||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  41670367 gatagcttatagttgaaacgatggtttattaaaattgaaatgtttggtaaaattagttgttgaagtggctgataagtataaaatgacataaaag 41670274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 208
Target Start/End: Complemental strand, 18146990 - 18146891
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    |||||||||||||||||||| | ||| ||||||| |||  |||||||||||||||||||||||||||| || | || |||||||||||||||||| ||||    
T  18146990 gatagcttatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttgaagtgact-ataaatataaaatgacataaaaggacat 18146892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 31719483 - 31719391
Alignment:
Q  117 atagctgaaaagcttgcttattaaaaataatg-tgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||| | ||||||||||| |||   |||||||||||||||||||||||||||  ||| || ||||||||||||||||||||||||    
T  31719483 atagctgaaaagttagcttattaaaattaaaactgtttggtaaaattagctgttgaagtgattgataaatataaaatgacataaaagaacatg 31719391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 202
Target Start/End: Complemental strand, 3513129 - 3513020
Alignment:
Q  97 tgatgactgatagat---agcttatagctgaaaagcttgcttattaaaa-ataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaat 192  Q
    |||||||||||||||   || |||||||||||||| | ||||||||||| | || ||||||||||||||||| |||| |||||||||| || ||||||||    
T  3513129 tgatgactgatagatgatagtttatagctgaaaagttagcttattaaaataaaaagtgtttggtaaaattagttgttcaagtggctgataaatataaaat 3513030  T
Q  193 gacataaaag 202  Q
    ||| ||||||    
T  3513029 gacgtaaaag 3513020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 2772252 - 2772310
Alignment:
Q  111 tagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgtt 169  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  2772252 tagctgatagctgaaaagctcgcttattaaaaataatgtgtttggtaaaactagctgtt 2772310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 202
Target Start/End: Complemental strand, 42803877 - 42803783
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaa-ataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    ||||| |||||||||||||| | ||||||||||| | || |||||||||||||||||| ||| |||||||||| || ||||||||||| ||||||    
T  42803877 gatagtttatagctgaaaagttagcttattaaaataaaaagtgtttggtaaaattagccgtttaagtggctgataaatataaaatgacgtaaaag 42803783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 202
Target Start/End: Original strand, 17911970 - 17912055
Alignment:
Q  117 atagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    |||| |||||| || |||||||||||||||| ||||||| |||||||| |||||||||| ||||  | ||||||||||||||||||    
T  17911970 atagttgaaaaactcgcttattaaaaataatatgtttggaaaaattagttgttgaagtgactgattaatataaaatgacataaaag 17912055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 201
Target Start/End: Complemental strand, 40532666 - 40532574
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaa 201  Q
    |||||||||||||||||||| | ||| ||||||| |||  |||||||||||||||||||||||||||| || | || |||||||||||||||||    
T  40532666 gatagcttatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttgaagtgact-ataaatataaaatgacataaaa 40532574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 41356958 - 41356829
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaag 173  Q
    ||||||||||||||||||||||| ||  ||||| |    ||||||||||||||| | ||  ||||||| |||  ||||||||||||||||||||||||||    
T  41356958 agctgatagctgaaaagctagcttatagctgatgg----cttatagctgaaaagttagcggattaaaattaaaagtgtttggtaaaattagctgttgaag 41356863  T
Q  174 tggctgagaagtataaaatgacataaaagaacatg 208  Q
    || || | || |||||||||||||||||| |||||    
T  41356862 tgact-ataaatataaaatgacataaaaggacatg 41356829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 201
Target Start/End: Complemental strand, 43874628 - 43874506
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaag 173  Q
    ||||||||||||||||||||||||||    ||| |||||| |||| |||||||| | ||| ||||||| |||  ||||||||||||||||||||||||||    
T  43874628 agctgatagctgaaaagctagctgata---gat-gatagcctataactgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttgaag 43874533  T
Q  174 tggctgagaagtataaaatgacataaaa 201  Q
    || || | || |||||||||||||||||    
T  43874532 tgact-ataaatataaaatgacataaaa 43874506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 202
Target Start/End: Original strand, 45236253 - 45236346
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    |||| ||||||||| ||||| | ||||||| ||| |||  |||||||||||||||||||||||||||  ||| || ||||||||||||||||||    
T  45236253 gataacttatagctaaaaagttagcttatttaaattaaaatgtttggtaaaattagctgttgaagtgattgataaatataaaatgacataaaag 45236346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 109 - 209
Target Start/End: Original strand, 34900217 - 34900317
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||| ||||||||||||||||  ||  || ||| ||||||||||||||||||||||| ||||| ||  ||| || |||||||||||||||||| |||||    
T  34900217 gatagtttatagctgaaaagctaactgtttgaaattaatgtgtttggtaaaattagcttttgaaatgtgtgataaatataaaatgacataaaagtacatg 34900316  T
Q  209 t 209  Q
    |    
T  34900317 t 34900317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 35252499 - 35252591
Alignment:
Q  117 atagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||| | ||||||||||| |||  |||||||||||||||| |||||||| || |||| || |||||||||||||||||| |||||    
T  35252499 atagctgaaaagttagcttattaaaattaaaagtgtttggtaaaattaactgttgaactgactgataaatataaaatgacataaaaggacatg 35252591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 75 - 202
Target Start/End: Original strand, 16785954 - 16786078
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaa-ataatgtgtttggtaaaattagctgttgaag 173  Q
    |||| ||||||||||||||||||| | |||||| |    || |||||||||||| | ||||||||||| | || ||||||||||||||||| |||| |||    
T  16785954 agctaatagctgaaaagctagctggtaactgatgg----ctgatagctgaaaagttagcttattaaaataaaaagtgtttggtaaaattagttgttcaag 16786049  T
Q  174 tggctgagaagtataaaatgacataaaag 202  Q
    ||| ||| || ||||||||||| ||||||    
T  16786050 tggatgataaatataaaatgacgtaaaag 16786078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 45069227 - 45069363
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttg 170  Q
    ||||||||||||||||||||||| ||  | ||| |   ||| ||||||||||||||| | ||| ||||||| |||  ||||||||||||||||| |||||    
T  45069227 agctgatagctgaaaagctagcttatagccgatggttgataacttatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagttgttg 45069326  T
Q  171 aagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||| || | || |||||||||||||||||| |||||    
T  45069327 aagtgact-ataaatataaaatgacataaaaggacatg 45069363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 109 - 201
Target Start/End: Complemental strand, 25133834 - 25133741
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaa 201  Q
    ||||||||||||||  |||| | ||||||||||| |||  ||||||||||||||||| |||| |||| ||||| || |||||||||||||||||    
T  25133834 gatagcttatagctagaaagttagcttattaaaattaaaagtgtttggtaaaattagttgttaaagtagctgataaatataaaatgacataaaa 25133741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 39103592 - 39103721
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaag 173  Q
    ||||||||||||||||| ||||| ||  ||||| |    || |||||||||||| | ||| ||||||| |||  ||||||||||||||||||||||||||    
T  39103592 agctgatagctgaaaagttagcttatagctgatgg----ctgatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttgaag 39103687  T
Q  174 tggctgagaagtataaaatgacataaaagaacatg 208  Q
    || || | || |||||||||||||||||| |||||    
T  39103688 tgact-ataaatataaaatgacataaaaggacatg 39103721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 201
Target Start/End: Original strand, 4477031 - 4477160
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgat---agatagcttatagctgaaaagcttgcttattaaaaat-aatgtgtttggtaaaattagctgttg 170  Q
    ||||||||||||||||||||||| ||  |||||    |||| ||||||||| ||||| | ||| ||||||| | || |||||||||||||||||||||||    
T  4477031 agctgatagctgaaaagctagcttatagctgatggctgataacttatagctcaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttg 4477130  T
Q  171 aagtggctgagaagtataaaatgacataaaa 201  Q
    ||||| || | || ||||||| |||||||||    
T  4477131 aagtgact-ataaatataaaaagacataaaa 4477160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 189
Target Start/End: Original strand, 16785756 - 16785867
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaa-ataatgtgtttggtaaaattagctgttgaag 173  Q
    |||| ||||||||||||||||||| | |||||| |    || |||||||||||| | ||||||||||| | || ||||||||||||||||| |||| |||    
T  16785756 agctaatagctgaaaagctagctggtaactgatgg----ctgatagctgaaaagttagcttattaaaataaaaagtgtttggtaaaattagttgttcaag 16785851  T
Q  174 tggctgagaagtataa 189  Q
    ||||||| || |||||    
T  16785852 tggctgataaatataa 16785867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 208
Target Start/End: Original strand, 29050611 - 29050705
Alignment:
Q  115 ttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||| |||||||| | ||||||||||| |||  || |||||||||||||| |||| |||| ||||| || |||||||||||||||||| |||||    
T  29050611 ttataactgaaaagttagcttattaaaattaaaagtatttggtaaaattagttgttaaagtagctgataaatataaaatgacataaaaggacatg 29050705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 202
Target Start/End: Complemental strand, 34618536 - 34618446
Alignment:
Q  112 agcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    |||||||||||||||| || | | ||| | | ||| ||||||||||||||||| | |||||||| |||| || ||||||||||||||||||    
T  34618536 agcttatagctgaaaaactagttgattgatattaaagtgtttggtaaaattagtttttgaagtgactgataaatataaaatgacataaaag 34618446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 117 - 206
Target Start/End: Complemental strand, 41356247 - 41356157
Alignment:
Q  117 atagctgaaaagcttgcttattaaaa-ataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaaca 206  Q
    |||||||||||  | ||||||||||| | || ||||||||||||||||| |||| |||||||||| || ||||||||||  ||||||||||    
T  41356247 atagctgaaaatttagcttattaaaataaaaagtgtttggtaaaattagttgttcaagtggctgataaatataaaatgatgtaaaagaaca 41356157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 5964679 - 5964768
Alignment:
Q  112 agcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaa 201  Q
    |||||||||||||||| || | | ||| ||| ||| |||||||||||||||| || |||||||  |||| || |||||||||||||||||    
T  5964679 agcttatagctgaaaaactagttgattgaaattaaagtgtttggtaaaattaacttttgaagtaactgataaatataaaatgacataaaa 5964768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 35011116 - 35011176
Alignment:
Q  149 tgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgt 209  Q
    |||||||||||||||||| ||||| ||  ||| || |||||||||||||||||| ||||||    
T  35011116 tgtttggtaaaattagcttttgaaatgaatgataaatataaaatgacataaaagtacatgt 35011176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 38604666 - 38604622
Alignment:
Q  134 ttattaaaaataatgtgtttggtaaaattagctgttgaagtggct 178  Q
    ||||||||| ||||||||||||||||||||| ||||||| |||||    
T  38604666 ttattaaaattaatgtgtttggtaaaattagttgttgaattggct 38604622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 43150847 - 43150776
Alignment:
Q  148 gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgttt-tttaatat 219  Q
    ||||||||||||||||||| || ||||| || | || |||||||||||||||||| |||||||| ||||||||    
T  43150847 gtgtttggtaaaattagctctttaagtgact-ataaatataaaatgacataaaaggacatgtttgtttaatat 43150776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 207
Target Start/End: Original strand, 3890735 - 3890818
Alignment:
Q  124 aaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    ||||||| ||||||||||| |||||||||||||||| ||    |||||||| ||||  || ||||||||| |||||||| ||||    
T  3890735 aaaagctcgcttattaaaactaatgtgtttggtaaagttgatggttgaagttgctggtaaatataaaatggcataaaagtacat 3890818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 35056745 - 35056833
Alignment:
Q  114 cttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    ||||| ||||||||||| | | ||| ||| ||| ||||||||||||||||||  || || || |||| || |||||||||||| |||||    
T  35056745 cttatggctgaaaagctagttgattgaaattaaagtgtttggtaaaattagcgtttaaaatgactgataaatataaaatgacagaaaag 35056833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 123; Significance: 3e-63; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 75 - 232
Target Start/End: Complemental strand, 22708132 - 22707973
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttga 171  Q
    |||| ||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22708132 agcttatagctgaaaagctagctgatgactgatagctgatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttga 22708033  T
Q  172 agtggctgagaagtataaaatgacataaaagaacatgttttttaatatacatatagacaca 232  Q
    ||||||||| || |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  22708032 agtggctgataaatataaaatgacataaaaggacat-ttttttaatatacatatagacaca 22707973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 18368907 - 18369035
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaaca-- 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||| |||      
T  18368907 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtgactgataagtataaaataacataaaaggacatt 18369006  T
Q  207 -tgttttttaatatacatatagacacaca 234  Q
     | ||||||||||||||||||||||||||    
T  18369007 tttttttttaatatacatatagacacaca 18369035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 20646470 - 20646340
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20646470 gatagcttatagctgaaaagcctgcttattaaaaataatgtatttgataaaattagctgttgaagtggctgataagtataaaatgacataaaagaacatg 20646371  T
Q  209 tt-----ttttaatatacatatagacacaca 234  Q
    ||     ||||||||||||||||||||||||    
T  20646370 tttttttttttaatatacatatagacacaca 20646340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 24118506 - 24118634
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  24118506 gatagcttatagctgaaaaacttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgataaatataaaatgacataaaaggacatg 24118605  T
Q  209 ---ttttttaatatacatatagacacaca 234  Q
       ||||||||||||||||||||| ||||    
T  24118606 tttttttttaatatacatatagacgcaca 24118634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 93 - 234
Target Start/End: Complemental strand, 12131296 - 12131145
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    |||||||||| ||||||   |||| ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  12131296 tagctgatgattgatagctgatagtttatagctgaaaaacttgtttattaaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataa 12131197  T
Q  190 aatgacataaaagaacatgtt-------ttttaatatacatatagacacaca 234  Q
    |||||||||||||||||||||       ||||||||||||||||||||||||    
T  12131196 aatgacataaaagaacatgtttttttttttttaatatacatatagacacaca 12131145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 75 - 202
Target Start/End: Original strand, 32986227 - 32986350
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagt 174  Q
    ||||| ||||||||||||||||||||  ||    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  32986227 agctggtagctgaaaagctagctgatagct----gatagtttatagctgaaaagcttgcttattaaaaataacgtgtttggtaaaattagttgttgaagt 32986322  T
Q  175 ggctgagaagtataaaatgacataaaag 202  Q
    |||||| ||||||||||| |||||||||    
T  32986323 ggctgataagtataaaataacataaaag 32986350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 75 - 197
Target Start/End: Original strand, 25022239 - 25022357
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagt 174  Q
    ||||||||| ||||||||||||||||  ||||||     ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  25022239 agctgatagttgaaaagctagctgatagctgataa----cttatagctgaaaagtttgcttattaaaaataatgtgtttggtaaaattagttgttgaagt 25022334  T
Q  175 ggctgagaagtataaaatgacat 197  Q
    |||||| ||||||||||||||||    
T  25022335 ggctgataagtataaaatgacat 25022357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 109 - 197
Target Start/End: Original strand, 13755615 - 13755703
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacat 197  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  13755615 gataacttatagctgaaaagtttgcttattaaaaataatgtgtttggtaaaattagatgttgaagtggctgataagtataaaatgacat 13755703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 32561731 - 32561833
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||||| | | ||||||||| | | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  32561731 gatagcttatagctgaaaagatggtttattaaaattgaagtgtttggtaaaattagctgttgaagtggctgataagtataaaatgacataaaaggacatg 32561830  T
Q  209 ttt 211  Q
    |||    
T  32561831 ttt 32561833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 111 - 197
Target Start/End: Complemental strand, 5957071 - 5956985
Alignment:
Q  111 tagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacat 197  Q
    ||||||||||||||||| ||  ||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  5957071 tagcttatagctgaaaatctcactttttaaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataaaatgacat 5956985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 109 - 209
Target Start/End: Complemental strand, 32560689 - 32560589
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||||| | | ||||||||| | | ||||||||||||||||| ||||||||||||||| || |||||||||||||||||| |||||    
T  32560689 gatagcttatagctgaaaagatagtttattaaaattgaagtgtttggtaaaattagttgttgaagtggctgataaatataaaatgacataaaaggacatg 32560590  T
Q  209 t 209  Q
    |    
T  32560589 t 32560589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 13868104 - 13868002
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||||| | | ||||||||| | | ||||| ||||||||||| | ||||||||||||| ||||||||||||||||||||| |||||    
T  13868104 gatagcttatagctgaaaagatggtttattaaaattgaagtgttaggtaaaattagatattgaagtggctgataagtataaaatgacataaaaggacatg 13868005  T
Q  209 ttt 211  Q
    |||    
T  13868004 ttt 13868002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 112 - 209
Target Start/End: Complemental strand, 21527623 - 21527526
Alignment:
Q  112 agcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgt 209  Q
    |||||||||||||||| || ||| ||||||| ||| |||||||||||||||| || |||||||| || | || |||||||||||||||||| ||||||    
T  21527623 agcttatagctgaaaaactagctgattaaaattaaagtgtttggtaaaattaactattgaagtgactcataaatataaaatgacataaaaggacatgt 21527526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 208
Target Start/End: Complemental strand, 18802356 - 18802257
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    |||||||||||||||||||| | ||| ||||||| |||  |||||||||||||||||||||||||||| || | || |||||||||||||||||| ||||    
T  18802356 gatagcttatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttgaagtgact-ataaatataaaatgacataaaaggacat 18802258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 31603371 - 31603463
Alignment:
Q  117 atagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||| | ||||||||||| |||  ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||| |||||    
T  31603371 atagctgaaaagttagcttattaaaattaaaagtgtttggtaaaattagttgttgaagtggttgataaatataaaatgacataaaaggacatg 31603463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 1790472 - 1790336
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgat---agatagcttatagctgaaaagcttgcttattaaaaat-aatgtgtttggtaaaattagctgttg 170  Q
    ||||||||||||||||||||||| ||  |||||    |||||||||||| ||||||| | ||| ||||||| | || ||||||||||||||||| |||||    
T  1790472 agctgatagctgaaaagctagcttatagctgatggctgatagcttatagttgaaaagttagctgattaaaattaaaagtgtttggtaaaattagttgttg 1790373  T
Q  171 aagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||| || | || |||||||||||||||||| |||||    
T  1790372 aagtgact-ataaatataaaatgacataaaaggacatg 1790336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 109 - 208
Target Start/End: Complemental strand, 4977168 - 4977069
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    |||||||||||||||||||| | ||| ||||||| |||  |||||||||||||||| ||||||||||| || | || |||||||||||||||||| ||||    
T  4977168 gatagcttatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattaactgttgaagtgact-ataaatataaaatgacataaaaggacat 4977070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 111 - 202
Target Start/End: Complemental strand, 14856271 - 14856179
Alignment:
Q  111 tagcttatagctgaaaag-cttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    |||||||||||||||||  || ||||||||||| ||| |||||||||||| |||||||| |||||  |||| || ||||||||||||||||||    
T  14856271 tagcttatagctgaaaaaactagcttattaaaattaaagtgtttggtaaagttagctgtcgaagtaactgataaatataaaatgacataaaag 14856179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 22708172 - 22708114
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgata---gatagcttatagctgaaaagct 130  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||    
T  22708172 agctgatagctgaaaagctagctgatgactgatagctgatagcttatagctgaaaagct 22708114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 24160097 - 24160009
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacat 197  Q
    ||||||||||| |||||||| |   ||||||||| | | ||||||| ||||||||||||||||||||||| | |||||||||| |||||    
T  24160097 gatagcttatacctgaaaagatgttttattaaaattgaagtgtttgttaaaattagctgttgaagtggctaataagtataaaaggacat 24160009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 208
Target Start/End: Original strand, 31259003 - 31259102
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    |||||||||||||| ||||| | ||| ||||||| |||  ||||||||||||||||||| |||||||| || | || |||||||||||||||||| ||||    
T  31259003 gatagcttatagctaaaaagttagctgattaaaattaaaagtgtttggtaaaattagctattgaagtgact-ataaatataaaatgacataaaaggacat 31259101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 207
Target Start/End: Complemental strand, 20526081 - 20525983
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    ||||||| |||| | ||||||| ||||||||||| ||| ||||||||||||||||||||||  | || |  | || |||||||||||||||||| ||||    
T  20526081 gatagctgatagttaaaaagctagcttattaaaattaaagtgtttggtaaaattagctgtttgaatgacaaataaatataaaatgacataaaaggacat 20525983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 208
Target Start/End: Complemental strand, 191529 - 191470
Alignment:
Q  148 gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||||||||||||| || | || |||||| ||||||||||| |||||    
T  191529 gtgtttggtaaaattagctgttgaagtgact-ataaatataaactgacataaaaggacatg 191470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 4e-59; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 75 - 234
Target Start/End: Original strand, 34589168 - 34589336
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttga 171  Q
    ||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34589168 agctgatagttgaaaagctagctgatgactgatagctgatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttga 34589267  T
Q  172 agtggctgagaagtataaaatgacataaaagaacatg------ttttttaatatacatatagacacaca 234  Q
    ||||||||| ||||||||||||||||||||| | |||      ||||||||||||||||||||||||||    
T  34589268 agtggctgataagtataaaatgacataaaaggatatgttttttttttttaatatacatatagacacaca 34589336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 93 - 234
Target Start/End: Original strand, 27812316 - 27812460
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||    
T  27812316 tagctgatgactgatagttgatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttaaagtgactgataagtataa 27812415  T
Q  190 aatgacataaaagaacatgttttttaatatacatatagacacaca 234  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||    
T  27812416 aatgacataaaaggacattttttttaatatacatatagacacaca 27812460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 15499453 - 15499326
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  15499453 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgataaatataaaatgacataaaaggacatg 15499354  T
Q  209 tt--ttttaatatacatatagacacaca 234  Q
    ||  ||||||||||||||||||||||||    
T  15499353 ttttttttaatatacatatagacacaca 15499326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 29524646 - 29524774
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  29524646 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgataaatataaaatgacataaaaggacatg 29524745  T
Q  209 ---ttttttaatatacatatagacacaca 234  Q
       ||||||||||||||||||||||||||    
T  29524746 tttttttttaatatacatatagacacaca 29524774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 75 - 234
Target Start/End: Complemental strand, 22778027 - 22777864
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttga 171  Q
    ||||||||||||||||| |||||||||||||||||   |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  22778027 agctgatagctgaaaagttagctgatgactgatagctgatagtttatagctgaaaagcttgcttattaaaaataatgtttttggtaaaattagccgttga 22777928  T
Q  172 agtggctgagaagtataaaatgacataaaa-gaacatgttttttaatatacatatagacacaca 234  Q
    ||||| ||| |||||||||||||||||||| ||   | ||||||||||||||||||||||||||    
T  22777927 agtggttgataagtataaaatgacataaaatgacttttttttttaatatacatatagacacaca 22777864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 75 - 228
Target Start/End: Original strand, 6788865 - 6789018
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagt 174  Q
    ||||||||||||||||||||||||||  ||||| ||   || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6788865 agctgatagctgaaaagctagctgatagctgat-ga---ctgatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagt 6788960  T
Q  175 ggctgagaagtataaaatgacataaaagaacatg----ttttttaatatacatataga 228  Q
    |||||| ||||||||||||||||||||| |||||    ||||||||||||||||||||    
T  6788961 ggctgataagtataaaatgacataaaaggacatgttttttttttaatatacatataga 6789018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 37530027 - 37530155
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  37530027 gatagcttatagctgaaaagcttgcttgttaaaaataatgtgtttggtaaaattagctgttgaagtggctgataaatataaaatgacataaaaggacatg 37530126  T
Q  209 ---ttttttaatatacatatagacacaca 234  Q
       ||||||||||||||||||||||||||    
T  37530127 tttttttttaatatacatatagacacaca 37530155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 93 - 234
Target Start/End: Complemental strand, 36761946 - 36761799
Alignment:
Q  93 tagctgatgactgata---gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    ||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  36761946 tagctgatgactgataactgatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataa 36761847  T
Q  190 aatgacataaaagaa---catgttttttaatatacatatagacacaca 234  Q
    ||||||||||||| |     | |||||||||||||||||| |||||||    
T  36761846 aatgacataaaaggatttttttttttttaatatacatataaacacaca 36761799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 110 - 230
Target Start/End: Complemental strand, 42710096 - 42709971
Alignment:
Q  110 atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgt 209  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  42710096 atagcttatagctgaaaaacttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgacataaaaggacatgt 42709997  T
Q  210 t-----ttttaatatacatatagaca 230  Q
    |     ||||||||||||||||||||    
T  42709996 ttttttttttaatatacatatagaca 42709971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 78 - 234
Target Start/End: Complemental strand, 12282463 - 12282305
Alignment:
Q  78 tgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggc 177  Q
    |||||||||||||| ||||||||  ||    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||    
T  12282463 tgatagctgaaaagttagctgatagct----gatagcttatagctgaaaaacttgcttattaaaaataatgtgtttggtaaaattagctgttgaaatagc 12282368  T
Q  178 tgagaagtataaaatgacataaaagaacatg------ttttttaatatacatatagacacaca 234  Q
    ||| ||||||||||||||||||||| |||||      ||||||||||||||||||||||||||    
T  12282367 tgataagtataaaatgacataaaaggacatgttttttttttttaatatacatatagacacaca 12282305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 109 - 214
Target Start/End: Original strand, 11783509 - 11783614
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||| |||||    
T  11783509 gatagcttatagctgaaaaacttgcttattaaaaataatgtgtttggtaaaattagctgtcgaaatggctgataagtataaaatgacataaaaggacatg 11783608  T
Q  209 tttttt 214  Q
    ||||||    
T  11783609 tttttt 11783614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 93 - 230
Target Start/End: Original strand, 41733576 - 41733719
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    ||||||||||||| |||   ||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||  |||| ||||||||    
T  41733576 tagctgatgactggtagctgataacttatagctgaaaaacttgcttattaaaaataatgtgtttggtaaaattaactgttgaagtaactgataagtataa 41733675  T
Q  190 aatgacataaaagaacatgttttt---taatatacatatagaca 230  Q
    ||||||||||||| ||||||||||   |||||||||||||||||    
T  41733676 aatgacataaaaggacatgtttttttataatatacatatagaca 41733719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 109 - 226
Target Start/End: Original strand, 16217630 - 16217748
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| || |     
T  16217630 gatagcttatagctgaaaagtttgcttattaaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataaaatgacataaaaggacttt 16217729  T
Q  209 ttt-tttaatatacatata 226  Q
    ||| ||||||||| |||||    
T  16217730 tttatttaatatatatata 16217748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 93 - 214
Target Start/End: Complemental strand, 23591464 - 23591340
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    ||||| |||||||||||   || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  23591464 tagctaatgactgatagctgatggcttatagctgaaaaacttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtgtctgataagtataa 23591365  T
Q  190 aatgacataaaagaacatgtttttt 214  Q
    ||||||||||||  |||||||||||    
T  23591364 aatgacataaaatgacatgtttttt 23591340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 97 - 197
Target Start/End: Complemental strand, 35639592 - 35639489
Alignment:
Q  97 tgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatg 193  Q
    |||||||||||||   |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||    
T  35639592 tgatgactgatagctgatagcttatagctgaaaagcttgcttattaaaaataatgtatttgataaaattagctgttgaagtggctgataagtataaaatg 35639493  T
Q  194 acat 197  Q
    ||||    
T  35639492 acat 35639489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 111 - 197
Target Start/End: Complemental strand, 24172147 - 24172061
Alignment:
Q  111 tagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacat 197  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  24172147 tagctgatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtgactgataagtataaaatgacat 24172061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 129 - 214
Target Start/End: Original strand, 12939071 - 12939156
Alignment:
Q  129 cttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgtttttt 214  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  12939071 cttgcttattaaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataaaatgacataaaaagacatgtttttt 12939156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 129 - 214
Target Start/End: Original strand, 12953156 - 12953241
Alignment:
Q  129 cttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgtttttt 214  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||  |||| ||||||    
T  12953156 cttgcttattaaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataaaatgacataaaaagacatatttttt 12953241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 77151 - 77063
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacat 197  Q
    ||||||| |||| ||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  77151 gatagctgatagatgaaaagattccttattaaaaataatgtgtttggtaaaattagatgttgaagtggctgataagtataaaatgacat 77063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 75 - 197
Target Start/End: Original strand, 7614287 - 7614419
Alignment:
Q  75 agctgatagctgaaaagctagctgat-------gactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattag 164  Q
    ||||||||||||||||||||||||||       |||||||||   |||| ||||| ||||||| |||||||||||||||||||||||||| |||||||||    
T  7614287 agctgatagctgaaaagctagctgataactgatgactgatagctgatagtttataactgaaaaacttgcttattaaaaataatgtgtttgataaaattag 7614386  T
Q  165 ctgttgaagtggctgagaagtataaaatgacat 197  Q
    |||||| ||||| ||| ||||||||||||||||    
T  7614387 ctgttggagtggttgataagtataaaatgacat 7614419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 5102123 - 5102225
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||| ||| |||||| || | || |||||||||||||||||| ||||||||| ||||||||||||||| || |||||||||||||||||| |||||    
T  5102123 gatagcttgtagttgaaaaactcgtttgttaaaaataatgtgtttgataaaattagttgttgaagtggctgataaatataaaatgacataaaaggacatg 5102222  T
Q  209 ttt 211  Q
    |||    
T  5102223 ttt 5102225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 7156748 - 7156856
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaa-gcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtata 188  Q
    |||||||||||||||||   |||||||||||||||||| | | | |||||||||||||||||||||||||||||||||||||||||| ||||  | ||||    
T  7156748 tagctgatgactgatagctgatagcttatagctgaaaaagatcgtttattaaaaataatgtgtttggtaaaattagctgttgaagtgactgattaatata 7156847  T
Q  189 aaatgacat 197  Q
    |||||||||    
T  7156848 aaatgacat 7156856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 109 - 213
Target Start/End: Complemental strand, 24464372 - 24464269
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||  |||||| || ||||||||| ||| |||||| ||||||||| |||| |||||    
T  24464372 gatagcttatagctgaaaaactcgcttattaaaaataatgtgtttgg-caaattaacttttgaagtggttgataagtatgaaatgacatcaaaggacatg 24464274  T
Q  209 ttttt 213  Q
    |||||    
T  24464273 ttttt 24464269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 109 - 209
Target Start/End: Original strand, 37252647 - 37252747
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||||| | | ||||||||| | | || |||||||||||||| ||||||||||||||| ||||||||||||||||| ||| |||||    
T  37252647 gatagcttatagctgaaaagatggtttattaaaattgaagtttttggtaaaattagatgttgaagtggctgataagtataaaatgacatataaggacatg 37252746  T
Q  209 t 209  Q
    |    
T  37252747 t 37252747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 109 - 169
Target Start/End: Complemental strand, 42423441 - 42423381
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgtt 169  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42423441 gatagcttatagctgaaaaacttgcttattaaaaataatgtgtttggtaaaattagctgtt 42423381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 8524644 - 8524542
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||| ||||||||||||||| | | ||||||||| ||| ||||| ||||||||||| ||||||||||||| | ||||||||||||||||||||  |||||    
T  8524644 gataacttatagctgaaaagatggtttattaaaattaaagtgttaggtaaaattagatgttgaagtggctaataagtataaaatgacataaaatgacatg 8524545  T
Q  209 ttt 211  Q
    |||    
T  8524544 ttt 8524542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 110 - 211
Target Start/End: Complemental strand, 15525126 - 15525025
Alignment:
Q  110 atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgt 209  Q
    ||||||||||||||||||| | | ||||||||| | | ||||||||||||||||| |||||||||| |||| || |||||||||||||||||| || |||    
T  15525126 atagcttatagctgaaaagatggtttattaaaattgaagtgtttggtaaaattagatgttgaagtgactgataaatataaaatgacataaaaggacttgt 15525027  T
Q  210 tt 211  Q
    ||    
T  15525026 tt 15525025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 109 - 213
Target Start/End: Original strand, 15526187 - 15526291
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||||| |   ||||||||| | | ||||||||||||||||||||||  ||  ||||| ||||||||||||||||||||| |||||    
T  15526187 gatagcttatagctgaaaagatcatttattaaaattgaagtgtttggtaaaattagctgttctagaagctgataagtataaaatgacataaaaggacatg 15526286  T
Q  209 ttttt 213  Q
    |||||    
T  15526287 ttttt 15526291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 79 - 211
Target Start/End: Original strand, 4558869 - 4559005
Alignment:
Q  79 gatagctgaaaagctagctgatgactgatagat---agcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagt 174  Q
    ||||||||||||||||||| ||  ||||||| |   ||||||||| ||||||| |  |||||||||| |||  |||||||||||||||| | | ||||||    
T  4558869 gatagctgaaaagctagcttatagctgatagctggtagcttatagttgaaaagttaacttattaaaattaaaagtgtttggtaaaattaaccgctgaagt 4558968  T
Q  175 ggctgagaagtataaaatgacataaaagaacatgttt 211  Q
    |  ||| || |||||||||||||||||||||||||||    
T  4558969 gagtgataaatataaaatgacataaaagaacatgttt 4559005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 208
Target Start/End: Complemental strand, 13019659 - 13019541
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatg-tgtttggtaaaattagctgttgaagtggctgagaagtata 188  Q
    ||||||||| |||||||   ||||||||||||||||||| | ||| ||||||| |||   ||||||||||||||||||||||||||| || | || ||||    
T  13019659 tagctgatggctgatagctgatagcttatagctgaaaagttagctgattaaaattaaaaatgtttggtaaaattagctgttgaagtgact-ataaatata 13019561  T
Q  189 aaatgacataaaagaacatg 208  Q
    |||||||||||||| |||||    
T  13019560 aaatgacataaaaggacatg 13019541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 207
Target Start/End: Complemental strand, 11576256 - 11576122
Alignment:
Q  77 ctgatagctgaaaagctagctgatgactgat---agatagcttatagctg-aaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaa 172  Q
    ||||||||||||||||||||| ||  |||||    ||||||||||||||| ||||||| ||||||||||| ||||||||||| |||| || |  ||||||    
T  11576256 ctgatagctgaaaagctagcttatagctgatggctgatagcttatagctgaaaaagctcgcttattaaaattaatgtgtttgataaagttggtggttgaa 11576157  T
Q  173 gtggctgagaagtataaaatgacataaaagaacat 207  Q
    || | ||  || |||||||||||||||||| ||||    
T  11576156 gttgatggtaaatataaaatgacataaaagtacat 11576122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 3034787 - 3034684
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggct-gagaagtataaaatgacataaaagaacat 207  Q
    |||||||||||||||||||  | | ||||||||| | | || || ||||||||||| ||||||||||||| || ||||||||||||||||||||  ||||    
T  3034787 gatagcttatagctgaaaaaatggtttattaaaattgaagtattaggtaaaattagatgttgaagtggctggataagtataaaatgacataaaatgacat 3034688  T
Q  208 gttt 211  Q
    ||||    
T  3034687 gttt 3034684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 202
Target Start/End: Original strand, 7947863 - 7947956
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    |||||||||||||||||||| | ||| ||||||| |||  ||||||||||||||||| |||||||||| || | || ||||||||||||||||||    
T  7947863 gatagcttatagctgaaaagttagctcattaaaattaaaagtgtttggtaaaattagttgttgaagtgact-ataaatataaaatgacataaaag 7947956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 36944158 - 36944216
Alignment:
Q  111 tagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgtt 169  Q
    ||||| ||||||||||||||  |||||||||||||||||||||| ||||||||||||||    
T  36944158 tagctgatagctgaaaagctcacttattaaaaataatgtgtttgataaaattagctgtt 36944216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 109 - 207
Target Start/End: Complemental strand, 41356889 - 41356790
Alignment:
Q  109 gatagcttatagctgaaaa-gcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    ||||||||||||||||||| ||| |||| |||||| |||||||||||||||| || |  |||||||| | ||  || |||||||||||||||||| ||||    
T  41356889 gatagcttatagctgaaaaagctcgcttgttaaaattaatgtgtttggtaaagttggtggttgaagttggtggtaaatataaaatgacataaaagtacat 41356790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 1924588 - 1924459
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaat-aatgtgtttggtaaaattagctgttgaag 173  Q
    ||||||| ||||||||||||||| ||  ||    |||||||||||||||||||| | ||| ||||||| | || ||| ||||||||||||| ||||||||    
T  1924588 agctgatggctgaaaagctagcttatagct----gatagcttatagctgaaaagttagctgattaaaattaaaagtgattggtaaaattagttgttgaag 1924493  T
Q  174 tggctgagaagtataaaatgacataaaagaacatg 208  Q
    | | | | || |||||||||||||||||| |||||    
T  1924492 t-gattataaatataaaatgacataaaaggacatg 1924459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 208
Target Start/End: Original strand, 20768319 - 20768418
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatg-tgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    |||| ||||||||||||||| | ||| ||||||| |||   | ||||||||||||||||||||||||| || | || ||||||||||||||||| |||||    
T  20768319 gataacttatagctgaaaagttagctgattaaaattaaaaatatttggtaaaattagctgttgaagtgact-ataaatataaaatgacataaaaaaacat 20768417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 35767179 - 35767108
Alignment:
Q  132 gcttattaaaa-ataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    ||||||||||| | || ||||||||||||||||| |||| |||||||||| || ||||||||||| ||||||    
T  35767179 gcttattaaaataaaaagtgtttggtaaaattagttgttcaagtggctgataaatataaaatgacgtaaaag 35767108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 169
Target Start/End: Complemental strand, 36960281 - 36960246
Alignment:
Q  134 ttattaaaaataatgtgtttggtaaaattagctgtt 169  Q
    ||||||||||||||||||||||||||||||||||||    
T  36960281 ttattaaaaataatgtgtttggtaaaattagctgtt 36960246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 2890390 - 2890485
Alignment:
Q  114 cttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgt 209  Q
    |||||||||||||| || | |  || ||| ||| ||||||||||||||| ||| ||||| ||  ||| || |||||||||||||||||| ||||||    
T  2890390 cttatagctgaaaaactagttgtttgaaattaaagtgtttggtaaaatttgcttttgaaatgagtgataaatataaaatgacataaaagtacatgt 2890485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 3747172 - 3747226
Alignment:
Q  157 aaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgttt 211  Q
    |||||||| ||||||| ||||||| |  |||||||||||||||||| ||||||||    
T  3747172 aaaattagttgttgaaatggctgatacatataaaatgacataaaaggacatgttt 3747226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 114; Significance: 6e-58; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 75 - 234
Target Start/End: Original strand, 19801107 - 19801272
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttga 171  Q
    ||||||||||||||||||||||||||  |||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19801107 agctgatagctgaaaagctagctgatagctgatagctgatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttga 19801206  T
Q  172 agtggctgagaagtataaaatgacataaaagaacatg---ttttttaatatacatatagacacaca 234  Q
    ||||||||| || |||||||||||||||||| |||||   ||||||||||||||||||||| ||||    
T  19801207 agtggctgataaatataaaatgacataaaaggacatgtttttttttaatatacatatagacgcaca 19801272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 47633173 - 47633295
Alignment:
Q  112 agcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgttt 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||    
T  47633173 agcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgacataaaaggacattttt 47633272  T
Q  212 tttaatatacatatagacacaca 234  Q
    |||||||||||||||||||||||    
T  47633273 tttaatatacatatagacacaca 47633295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 75 - 234
Target Start/End: Complemental strand, 6245109 - 6244942
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttga 171  Q
    ||||||||||||||||||||||||||  ||  |||   |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6245109 agctgatagctgaaaagctagctgatagctagtagctgatagcttatagctgaaaaacttgcttattaaaaataatgtgtttggtaaaattagctgttga 6245010  T
Q  172 agtggctgagaagtataaaatgacataaaagaacatgtt-----ttttaatatacatatagacacaca 234  Q
    ||||||||| ||||||||||||||||||||| |||||||     |||||||||||| |||||||||||    
T  6245009 agtggctgataagtataaaatgacataaaaggacatgtttttttttttaatatacaaatagacacaca 6244942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 93 - 214
Target Start/End: Original strand, 39839424 - 39839548
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  39839424 tagctgatgactgatagctgatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataa 39839523  T
Q  190 aatgacataaaagaacatgtttttt 214  Q
    ||| ||||||||| |||||||||||    
T  39839524 aataacataaaaggacatgtttttt 39839548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 53284782 - 53284653
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||| |||||    
T  53284782 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagttgttgaagtggctgataaatataaaatgacataaaaggacatg 53284683  T
Q  209 tt----ttttaatatacatatagacacaca 234  Q
    ||    ||||||||||||||||||||||||    
T  53284682 ttttttttttaatatacatatagacacaca 53284653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 93 - 214
Target Start/End: Original strand, 37113654 - 37113778
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||    
T  37113654 tagctgatgactgatagttgatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagatgttgatgtggctgataagtataa 37113753  T
Q  190 aatgacataaaagaacatgtttttt 214  Q
    ||||||||||||  |||||||||||    
T  37113754 aatgacataaaatgacatgtttttt 37113778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 49334502 - 49334630
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||  |||||    
T  49334502 gatagcttatagctgaaaagtttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgataaatataaaatgacataaaatgacatg 49334601  T
Q  209 ---ttttttaatatacatatagacacaca 234  Q
       |||||||||||||||||||| |||||    
T  49334602 tttttttttaatatacatatagatacaca 49334630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 109 - 214
Target Start/End: Complemental strand, 33984873 - 33984768
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||| |||||    
T  33984873 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaaatggctgataagtataaaatgacacaaaaggacatg 33984774  T
Q  209 tttttt 214  Q
    ||||||    
T  33984773 tttttt 33984768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 44449241 - 44449110
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||| |||||    
T  44449241 gatagctgatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaaatagctgataagtataaaatgacataaaaggacatg 44449142  T
Q  209 tt------ttttaatatacatatagacacaca 234  Q
    ||      ||||||||||||||||||||||||    
T  44449141 ttttttttttttaatatacatatagacacaca 44449110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 93 - 234
Target Start/End: Complemental strand, 19802641 - 19802494
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    |||||||||||||||||   |||  ||| ||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||    
T  19802641 tagctgatgactgatagctgatattttaaagctgaaaagcttacttattaaaaataatgtctttggtaaaattagttgttgaagtggctgataagtataa 19802542  T
Q  190 aatgacataaaagaacatg---ttttttaatatacatatagacacaca 234  Q
    ||||||||||||| |||||   ||||||||||||||||||||||||||    
T  19802541 aatgacataaaaggacatgattttttttaatatacatatagacacaca 19802494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 93 - 234
Target Start/End: Complemental strand, 43375436 - 43375286
Alignment:
Q  93 tagctgatgactgatag---atagcttat-agctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtata 188  Q
    |||||| ||||||||||   ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  43375436 tagctggtgactgatagctgatagcttattagctgaaaaacttgcttattaaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtata 43375337  T
Q  189 aaatgacataaaagaacatgtt-----ttttaatatacatatagacacaca 234  Q
    |||||||||||||| |||||||     ||||||||||||||| ||||||||    
T  43375336 aaatgacataaaaggacatgtttttttttttaatatacatatggacacaca 43375286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 93 - 234
Target Start/End: Original strand, 2942943 - 2943086
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    |||||||||||||||||   |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  2942943 tagctgatgactgatagctgatagcttacagctgaaaaacttgcttattaaaaataatgtgtttggtaaaattagctgttgaaatggctgataagtataa 2943042  T
Q  190 aatgacataaaagaacatgttttttaatatacatatagacacaca 234  Q
    || |||||| |   | || ||||||||||||||||||||||||||    
T  2943043 aaggacatatatatatat-ttttttaatatacatatagacacaca 2943086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 45559969 - 45560072
Alignment:
Q  117 atagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgttttttaa 216  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||| ||||||||    
T  45559969 atagttgaaaagcttacttattaaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataaaatgacataaaaggacattttttttaa 45560068  T
Q  217 tata 220  Q
    ||||    
T  45560069 tata 45560072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 93 - 214
Target Start/End: Original strand, 36180664 - 36180788
Alignment:
Q  93 tagctgatgactgata---gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    ||||||||||||||||   ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||  ||| ||||||||    
T  36180664 tagctgatgactgataactgatagtttatagctgaaaagtttgcttattaaaaataatgtgtttggtaaaattagttgttgaagtgattgataagtataa 36180763  T
Q  190 aatgacataaaagaacatgtttttt 214  Q
    |||| |||||||| |||||||||||    
T  36180764 aatggcataaaaggacatgtttttt 36180788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 109 - 214
Target Start/End: Complemental strand, 32013168 - 32013063
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||| ||||||||||||||||||||  |||||    
T  32013168 gatagtttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagttgttaaagtgactgataagtataaaatgacataaaaagacatg 32013069  T
Q  209 tttttt 214  Q
    ||||||    
T  32013068 tttttt 32013063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 89 - 192
Target Start/End: Original strand, 54999396 - 54999502
Alignment:
Q  89 aagctagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagt 185  Q
    |||||||||||||||||||||   ||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  54999396 aagctagctgatgactgatagctgatatcttatagctgaaaaacttgcttattaaaaataatgtgtttggtaaaattagttgttgaagtggctgataagt 54999495  T
Q  186 ataaaat 192  Q
    |||||||    
T  54999496 ataaaat 54999502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 78 - 196
Target Start/End: Complemental strand, 55345496 - 55345375
Alignment:
Q  78 tgatagctgaaaagctagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagt 174  Q
    |||||| |||||| ||||||||||||||||||   |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |    
T  55345496 tgatagttgaaaaactagctgatgactgatagttgatagcttatagctgaaaatcttgcttattaaaaataatgtgtttggtaaaattagctgttgatct 55345397  T
Q  175 ggctgagaagtataaaatgaca 196  Q
    | |||| | |||||||||||||    
T  55345396 gactgatatgtataaaatgaca 55345375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 55900375 - 55900498
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    |||||||||||| ||||   ||||||||||||||||||  |  ||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||    
T  55900375 tagctgatgactaatagctgatagcttatagctgaaaaattcacttattaaaaataatgtgtttggtaaaatgagttgttgaagtggctgataagtataa 55900474  T
Q  190 aatgacataaaagaacatgttttt 213  Q
    ||||||||||||| ||||||||||    
T  55900475 aatgacataaaaggacatgttttt 55900498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 93 - 201
Target Start/End: Complemental strand, 40675467 - 40675356
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    |||||||||||||||||   |||| || ||| |||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||    
T  40675467 tagctgatgactgatagctgatagtttgtagttgaaaaacttgcttattaaaaataatgtgtttggtaaaattaactattgaagtggctgataagtataa 40675368  T
Q  190 aatgacataaaa 201  Q
    ||||||||||||    
T  40675367 aatgacataaaa 40675356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 43939428 - 43939530
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||||| | | ||||||||| | | ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||    
T  43939428 gatagcttatagctgaaaagatggtttattaaaattgaagtgtttggtaaaattagttgttgaagtggctgataagtataaaatgacataaaaggacatg 43939527  T
Q  209 ttt 211  Q
    |||    
T  43939528 ttt 43939530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 97 - 213
Target Start/End: Original strand, 317887 - 318006
Alignment:
Q  97 tgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatg 193  Q
    |||||||||||||   |||||||||||||||||| ||  |||||||||||||||||||||| ||||||||  |||||||||| |||| ||||||||||||    
T  317887 tgatgactgatagttgatagcttatagctgaaaaactcacttattaaaaataatgtgtttgataaaattaattgttgaagtgactgataagtataaaatg 317986  T
Q  194 acataaaagaacatgttttt 213  Q
    ||||||||  ||||||||||    
T  317987 acataaaaagacatgttttt 318006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 51942545 - 51942443
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||||| | | ||||||||| | | ||||||||||||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  51942545 gatagcttatagctgaaaagatggtttattaaaattgaagtgtttggtaaaattagctattaaagtggctgataagtataaaatgacataaaaggacatg 51942446  T
Q  209 ttt 211  Q
    |||    
T  51942445 ttt 51942443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 109 - 214
Target Start/End: Original strand, 26188836 - 26188943
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgt--tgaagtggctgagaagtataaaatgacataaaagaaca 206  Q
    ||||||||||||||||||||||   |||||| || | | |||||||||||||||||||||  ||||||| |||| |||||||||||||||||||||||||    
T  26188836 gatagcttatagctgaaaagctgatttattataattgaagtgtttggtaaaattagctgtgttgaagtgactgataagtataaaatgacataaaagaaca 26188935  T
Q  207 tgtttttt 214  Q
    ||||||||    
T  26188936 tgtttttt 26188943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 93 - 211
Target Start/End: Original strand, 20530433 - 20530554
Alignment:
Q  93 tagctgatgactgata---gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    |||||||||| |||||   |||||||||||| |||||| || ||||||||||| ||| |||||||||||||||||| ||||||||| || | || |||||    
T  20530433 tagctgatgattgataattgatagcttatagttgaaaaactagcttattaaaattaaagtgtttggtaaaattagcggttgaagtgactaataaatataa 20530532  T
Q  190 aatgacataaaagaacatgttt 211  Q
    |||||| |||||||||||||||    
T  20530533 aatgacctaaaagaacatgttt 20530554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 10658001 - 10658103
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||||| |   ||||||||| | | ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||| |||||    
T  10658001 gatagcttatagctgaaaagatcatttattaaaattgaagtgtttggtaaaattagttgttgaagtgactgataagtataaaatgacataaaaggacatg 10658100  T
Q  209 ttt 211  Q
    |||    
T  10658101 ttt 10658103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 10872146 - 10872248
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||||| |   ||||||||| | | ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||| |||||    
T  10872146 gatagcttatagctgaaaagatcatttattaaaattgaagtgtttggtaaaattagttgttgaagtgactgataagtataaaatgacataaaaggacatg 10872245  T
Q  209 ttt 211  Q
    |||    
T  10872246 ttt 10872248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 109 - 207
Target Start/End: Complemental strand, 24153339 - 24153241
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    ||||||| |||| ||||||||| ||||||||||| ||| ||||||||||||||||||||||||| || |||| || |||||||||||||||||| ||||    
T  24153339 gatagctgatagttgaaaagctagcttattaaaattaaagtgtttggtaaaattagctgttgaaatgactgataaatataaaatgacataaaagtacat 24153241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 109 - 203
Target Start/End: Original strand, 49647870 - 49647964
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaaga 203  Q
    |||||||||||| ||||||| | | ||||||||| | | ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  49647870 gatagcttatagatgaaaagatggtttattaaaattgaagtgtttggtaaaattagctgttgaaatggctgataagtataaaatgacataaaaga 49647964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 51941766 - 51941665
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||| ||||||  | ||||||||||| |||||||||||||||||| || ||||||||||||||| ||||||||||||||||||| | |||||    
T  51941766 gatagcttatagttgaaaaattcgcttattaaaagtaatgtgtttggtaaaat-agttgttgaagtggctgataagtataaaatgacataaatggacatg 51941668  T
Q  209 ttt 211  Q
    |||    
T  51941667 ttt 51941665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 208
Target Start/End: Complemental strand, 31998499 - 31998377
Alignment:
Q  89 aagctagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaag 184  Q
    ||||||||||||| ||||| |   |||||| |||||||||||| | ||||||||||| |||  |||||||||||||||||||||| |||||||||| ||     
T  31998499 aagctagctgatggctgatggctgatagctgatagctgaaaagttggcttattaaaattaaaagtgtttggtaaaattagctgtt-aagtggctgataaa 31998401  T
Q  185 tataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||| |||||    
T  31998400 tataaaatgacataaaaggacatg 31998377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 10656944 - 10656842
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||||| |||||||||||| | | ||||||||| | | ||||||||||||||||| | |||||||| |||| || |||||||||||||||||| |||||    
T  10656944 gatagctcatagctgaaaagatggtttattaaaattgaagtgtttggtaaaattagatattgaagtgactgataaatataaaatgacataaaaggacatg 10656845  T
Q  209 ttt 211  Q
    |||    
T  10656844 ttt 10656842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 10871089 - 10870987
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||||| |||||||||||| | | ||||||||| | | ||||||||||||||||| | |||||||| |||| || |||||||||||||||||| |||||    
T  10871089 gatagctcatagctgaaaagatggtttattaaaattgaagtgtttggtaaaattagatattgaagtgactgataaatataaaatgacataaaaggacatg 10870990  T
Q  209 ttt 211  Q
    |||    
T  10870989 ttt 10870987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 93 - 201
Target Start/End: Complemental strand, 25697627 - 25697515
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaa-ataatgtgtttggtaaaattagctgttgaagtggctgagaagtata 188  Q
    ||||||||| |||||||   ||||||||||||||||||| | | ||||||||| | || |||||||||||||||||||||| |||||||||| || ||||    
T  25697627 tagctgatggctgatagctgatagcttatagctgaaaagttagtttattaaaataaaaagtgtttggtaaaattagctgtttaagtggctgataaatata 25697528  T
Q  189 aaatgacataaaa 201  Q
    ||||||| |||||    
T  25697527 aaatgacgtaaaa 25697515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 97 - 197
Target Start/End: Original strand, 48057958 - 48058061
Alignment:
Q  97 tgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatg 193  Q
    |||||||||||||   ||||||||||||| ||||  ||||||||||||||||||||||||| |||||||| ||||||||||| ||||  | |||||| ||    
T  48057958 tgatgactgatagttgatagcttatagctaaaaaatttgcttattaaaaataatgtgtttgataaaattaactgttgaagtgactgattaatataaactg 48058057  T
Q  194 acat 197  Q
    ||||    
T  48058058 acat 48058061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 49646812 - 49646691
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||||||||| |||||||| |   ||||||||||| | || ||||||||||||||| |||||||||||||| |||||||||| ||||||| || | |||    
T  49646812 gatagcttataactgaaaagatgatttattaaaaatgaagtatttggtaaaattagcggttgaagtggctgataagtataaaacgacataagaggatatg 49646713  T
Q  209 ttttttaatatacatatagaca 230  Q
    ||| |  ||||| |||||||||    
T  49646712 tttatatatatatatatagaca 49646691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 208
Target Start/End: Complemental strand, 19914223 - 19914124
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    |||||||||||||||||||| | ||| ||||||| |||  |||||||||||||||||||||||||||| || | || |||||||||||||||||| ||||    
T  19914223 gatagcttatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttgaagtgact-ataaatataaaatgacataaaaggacat 19914125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 31220734 - 31220646
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacat 197  Q
    |||| ||||||| |||||| || |||||||||||||||| |||||||||||||||| |||||||||| || | || |||||||||||||    
T  31220734 gataacttatagttgaaaaactcgcttattaaaaataatatgtttggtaaaattagttgttgaagtgactcataaatataaaatgacat 31220646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 112 - 211
Target Start/End: Original strand, 2389766 - 2389865
Alignment:
Q  112 agcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgttt 211  Q
    ||||||||||||||||| | ||| ||| ||| ||| ||||||||||||||||| ||||||||||| ||  || |||||||||||||||||  ||||||||    
T  2389766 agcttatagctgaaaagttagctgattgaaattaaagtgtttggtaaaattagttgttgaagtggttgttaaatataaaatgacataaaatgacatgttt 2389865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 27537047 - 27536976
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctga 180  Q
    |||| |||||||||||||| || || ||||||||||||| ||||||||||||||| ||||||||||||||||    
T  27537047 gatatcttatagctgaaaaactcgcatattaaaaataatctgtttggtaaaattaactgttgaagtggctga 27536976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 109 - 208
Target Start/End: Complemental strand, 30654152 - 30654053
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    |||||||||||||||||||| | ||| ||||||| |||  ||||||||||||||||||||||||||||  | | || |||||||||||||||||| ||||    
T  30654152 gatagcttatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttgaagtgagt-ataaatataaaatgacataaaaggacat 30654054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 202
Target Start/End: Original strand, 21234119 - 21234213
Alignment:
Q  108 agatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    |||||||| |||  |||||| || ||||||||||| |||  ||||||||||||||| |||||||| || |||| || ||||||||||||||||||    
T  21234119 agatagctgataattgaaaaactagcttattaaaattaaaatgtttggtaaaattaactgttgaaatgactgataaatataaaatgacataaaag 21234213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 214
Target Start/End: Original strand, 26919341 - 26919407
Alignment:
Q  148 gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgtttttt 214  Q
    ||||| ||||||||||| |||||||||| |||| ||||||||||||||||||||  |||||||||||    
T  26919341 gtgttaggtaaaattagatgttgaagtgactgataagtataaaatgacataaaatgacatgtttttt 26919407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 109 - 201
Target Start/End: Original strand, 30410699 - 30410791
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaa 201  Q
    |||| ||||||||||||||| | ||| ||||||| |||  |||||||||||||||||||||||||||| || | || |||||||||||||||||    
T  30410699 gataacttatagctgaaaagttagctaattaaaattaaaagtgtttggtaaaattagctgttgaagtgact-ataaatataaaatgacataaaa 30410791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 25421291 - 25421393
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||| | ||||||| | | ||||||||| ||| |||||| |||||||||  ||||||||||||||| || ||||||| ||| |||| | |||||    
T  25421291 gatagcttatggttgaaaagttagtttattaaaattaaagtgtttagtaaaattaattgttgaagtggctgacaaatataaaaagacctaaacggacatg 25421390  T
Q  209 ttt 211  Q
    |||    
T  25421391 ttt 25421393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 45109042 - 45109156
Alignment:
Q  89 aagctagctgatgactgata-gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtat 187  Q
    ||||||||||||  |||||| | ||||| ||||||||||||||  || ||| ||| |||  |||||||||||||||||| ||||| || || | || |||    
T  45109042 aagctagctgatagctgataagttagctgatagctgaaaagctaactgattgaaattaaaatgtttggtaaaattagcttttgaaatgactaaaaaatat 45109141  T
Q  188 aaaatgacataaaag 202  Q
    |||||||||||||||    
T  45109142 aaaatgacataaaag 45109156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 201
Target Start/End: Complemental strand, 47093610 - 47093498
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaag-cttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtata 188  Q
    ||||||||| |||||||   ||||||||||  ||||||  || ||||||||||| ||| |||||||||||| |||| ||| ||||| ||||| || ||||    
T  47093610 tagctgatgtctgatagctgatagcttataattgaaaaatctagcttattaaaattaaagtgtttggtaaagttagatgtcgaagtagctgataaatata 47093511  T
Q  189 aaatgacataaaa 201  Q
    |||||||||||||    
T  47093510 aaatgacataaaa 47093498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 53443790 - 53443732
Alignment:
Q  111 tagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgtt 169  Q
    ||||| ||||||||||| ||||||||||||||||| |||||||| ||||||||| ||||    
T  53443790 tagctgatagctgaaaaacttgcttattaaaaatagtgtgtttgataaaattagttgtt 53443732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 208
Target Start/End: Complemental strand, 55611309 - 55611212
Alignment:
Q  111 tagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||| ||||||| ||||| ||||||| |||  ||||||| |||||||||||||| ||||| || | || |||||||||||||||||| |||||    
T  55611309 tagcttatagttgaaaagtttgctgattaaaattaaaagtgtttgataaaattagctgttaaagtgact-ataaatataaaatgacataaaaggacatg 55611212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 7895958 - 7896035
Alignment:
Q  124 aaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaa 201  Q
    ||||| ||||||||||||| || |||||||||||||||| |  ||||||||| ||||  | |||||||||||||||||    
T  7895958 aaaagtttgcttattaaaattattgtgtttggtaaaattggtagttgaagtgactgattaatataaaatgacataaaa 7896035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 208
Target Start/End: Complemental strand, 45550317 - 45550199
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtata 188  Q
    ||||||||| |||||||   |||| |||||||||||||| | ||| ||||||| |||  ||||||||||||||||||| |||||||| || | || ||||    
T  45550317 tagctgatggctgatagctgatagattatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctcttgaagtgact-ataaatata 45550219  T
Q  189 aaatgacataaaagaacatg 208  Q
    ||| |||||||||| |||||    
T  45550218 aaaagacataaaaggacatg 45550199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 52575449 - 52575546
Alignment:
Q  112 agcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgt 209  Q
    ||||||||||||||||||| |||  ||  || |||  |||||||||||||||||| ||||| ||  ||| || |||||||||||||||||| ||||||    
T  52575449 agcttatagctgaaaagctggctgtttgtaattaaattgtttggtaaaattagcttttgaaatgaatgataaatataaaatgacataaaagtacatgt 52575546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 208
Target Start/End: Complemental strand, 28460260 - 28460161
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatg-tgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    |||| ||||||||||||||| | ||| ||||||| |||   | ||||||||||||||||||||||||| || | || ||||||||||||||||| |||||    
T  28460260 gataacttatagctgaaaagttagctgattaaaattaaaaatatttggtaaaattagctgttgaagtgact-ataaatataaaatgacataaaaaaacat 28460162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 41579645 - 41579554
Alignment:
Q  117 atagctgaaaagcttgcttattaaaa-ataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    |||||||||||| | ||||||||||| | ||  ||||||||||||||||  ||||||||| |||| || ||||||||||| |||||| ||||    
T  41579645 atagctgaaaagttagcttattaaaataaaaaatgtttggtaaaattagtcgttgaagtgactgataaatataaaatgacgtaaaaggacat 41579554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 37498819 - 37498766
Alignment:
Q  148 gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    ||||||||||||||||| ||||||||| ||||| || ||||||||||||||||||    
T  37498819 gtgtttggtaaaattagttgttgaagt-gctgataaatataaaatgacataaaag 37498766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 197
Target Start/End: Original strand, 50791808 - 50791857
Alignment:
Q  148 gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacat 197  Q
    ||||||||||||||||| ||||||||||| ||| ||| ||||||||||||    
T  50791808 gtgtttggtaaaattagttgttgaagtggttgataagcataaaatgacat 50791857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 26920154 - 26920206
Alignment:
Q  122 tgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagt 174  Q
    ||||||||||||| ||| ||| ||| ||||||||||||||||||| |||||||    
T  26920154 tgaaaagcttgctgatttaaattaaagtgtttggtaaaattagcttttgaagt 26920206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 30649908 - 30649956
Alignment:
Q  115 ttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaatta 163  Q
    ||||||||||||| ||| ||||||||||||||||| |||| ||||||||    
T  30649908 ttatagctgaaaaactttcttattaaaaataatgtatttgataaaatta 30649956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 207
Target Start/End: Complemental strand, 38006213 - 38006114
Alignment:
Q  109 gatagcttatagctga-aaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    |||||||||||||||| |||| |  |||||||||| |||||||||||||||| ||    |||||||| |||   || |||||||||||||||||| ||||    
T  38006213 gatagcttatagctgataaagttcacttattaaaattaatgtgtttggtaaagttgatggttgaagttgctagtaaatataaaatgacataaaagtacat 38006114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 194
Target Start/End: Complemental strand, 6288440 - 6288394
Alignment:
Q  148 gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatga 194  Q
    |||||||||||||||| ||||| |||||||||| || ||||||||||    
T  6288440 gtgtttggtaaaattaactgttcaagtggctgataaatataaaatga 6288394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 202
Target Start/End: Original strand, 44587645 - 44587730
Alignment:
Q  117 atagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    |||||||||||||| |||   | ||| ||| ||||||| ||||||||| | ||||||||  ||| || ||||||||||||||||||    
T  44587645 atagctgaaaagctagctgtcttaaattaaagtgtttgataaaattagattttgaagtgattgataaatataaaatgacataaaag 44587730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 169
Target Start/End: Complemental strand, 51930262 - 51930201
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgtt 169  Q
    |||||||||||||||||||| | ||| ||| ||| |||  ||||||||||||||||||||||    
T  51930262 gatagcttatagctgaaaagttagctgatttaaattaaaagtgtttggtaaaattagctgtt 51930201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 34440168 - 34440116
Alignment:
Q  112 agcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattag 164  Q
    |||||||| |||||||| | ||| ||||||| ||| |||||||||||||||||    
T  34440168 agcttataactgaaaagttagctgattaaaattaaagtgtttggtaaaattag 34440116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 6e-58; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 75 - 234
Target Start/End: Complemental strand, 30358892 - 30358727
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttga 171  Q
    ||||||||||||||||||||||||||  ||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30358892 agctgatagctgaaaagctagctgatagctggtagctgatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttga 30358793  T
Q  172 agtggctgagaagtataaaatgacataaaagaacatgtt---ttttaatatacatatagacacaca 234  Q
    ||||||||| || |||||||||||||||||| |||||||   ||||||||||||||||||||||||    
T  30358792 agtggctgataaatataaaatgacataaaaggacatgtttttttttaatatacatatagacacaca 30358727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 110 - 234
Target Start/End: Original strand, 50585526 - 50585654
Alignment:
Q  110 atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg- 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||     
T  50585526 atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgacataaaaggacatgt 50585625  T
Q  209 ---ttttttaatatacatatagacacaca 234  Q
       ||||||||||||||||||||||||||    
T  50585626 tttttttttaatatacatatagacacaca 50585654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 39326387 - 39326257
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  39326387 gatagcttatagctgaaaagcttgtttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgacataaaaggacatg 39326288  T
Q  209 tt-----ttttaatatacatatagacacaca 234  Q
    ||     ||||||||||||||||||||||||    
T  39326287 tttttttttttaatatacatatagacacaca 39326257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 76 - 234
Target Start/End: Complemental strand, 36740331 - 36740167
Alignment:
Q  76 gctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtg 175  Q
    ||||||||||||||||||||||    | |||  ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  36740331 gctgatagctgaaaagctagctagctaatgactgatagcttatagctgaaaaacttgcttattaaaaataatgtgtttgataaaattagctgttgaagtg 36740232  T
Q  176 gctgagaagtataaaatgacataaaagaacatg------ttttttaatatacatatagacacaca 234  Q
    ||||| ||||||||||||||||||||| |||||      ||||||||||||||||||||||||||    
T  36740231 gctgataagtataaaatgacataaaaggacatgtttttcttttttaatatacatatagacacaca 36740167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 11824363 - 11824232
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||    
T  11824363 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagatgttgaagtggctgataagtataaaatgacataaaataacatg 11824264  T
Q  209 tt------ttttaatatacatatagacacaca 234  Q
    ||      ||||||||||||||||||||||||    
T  11824263 ttttttttttttaatatacatatagacacaca 11824232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 58 - 214
Target Start/End: Complemental strand, 12015525 - 12015366
Alignment:
Q  58 tctgttcggtaaaaata----agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataatgtgttt 153  Q
    |||||| ||||||||||    ||||||||||||||||||||| ||||  ||||| |||  || |||||||||||||||||||||||||||||||||||||    
T  12015525 tctgtttggtaaaaataagctagctgatagctgaaaagctagttgatagctgat-gatgactcatagctgaaaagcttgcttattaaaaataatgtgttt 12015427  T
Q  154 ggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgtttttt 214  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||    
T  12015426 ggtaaaattagctgttgaagtggctgataaatataaaatgacataaaaggacatgtttttt 12015366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 93 - 231
Target Start/End: Original strand, 3569667 - 3569812
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  3569667 tagctgatgactgatagctgatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataa 3569766  T
Q  190 aatgacataaaagaacatgtttttt----aatatacatatagacac 231  Q
    |||||||||||||  ||||||||||    || ||||||||||||||    
T  3569767 aatgacataaaaggtcatgttttttttttaaaatacatatagacac 3569812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 12769898 - 12770026
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||| |||||    
T  12769898 gatagcttatagctgaaaagattgcttattaaaaataatgtgtttggtaaaattagctgtcgatgtggctgataagtataaaatgacataaaaggacatg 12769997  T
Q  209 ---ttttttaatatacatatagacacaca 234  Q
       ||||||||||||||||||||||||||    
T  12769998 attttttttaatatacatatagacacaca 12770026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 75 - 197
Target Start/End: Complemental strand, 45900954 - 45900822
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatag----------atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattag 164  Q
    |||||||||||||||||||||||||| |||| |||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45900954 agctgatagctgaaaagctagctgataactggtagctgatagctgatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattag 45900855  T
Q  165 ctgttgaagtggctgagaagtataaaatgacat 197  Q
    |||||||||||||||| ||||||||||||||||    
T  45900854 ctgttgaagtggctgataagtataaaatgacat 45900822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 109 - 215
Target Start/End: Original strand, 47325885 - 47325991
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||| |||||    
T  47325885 gatagctgatagttgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctattgaagtggatgataagtataaaatgacataaaaggacatg 47325984  T
Q  209 tttttta 215  Q
    |||||||    
T  47325985 tttttta 47325991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 38624854 - 38624732
Alignment:
Q  112 agcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgttt 211  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  38624854 agcttatagttgaaaagtttgcttattaaaaataatgtgtttgataaaattagttgttgaagtggctgataagtataaaattacataaaaggacatgttt 38624755  T
Q  212 tttaatatacatatagacacaca 234  Q
    |||  |||| | |||||||||||    
T  38624754 ttttttatatacatagacacaca 38624732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 109 - 202
Target Start/End: Original strand, 1189428 - 1189521
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  1189428 gatagcttatagctgaaaagtttgcttagtaaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataaaatgacataaaag 1189521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 108 - 193
Target Start/End: Original strand, 46311979 - 46312064
Alignment:
Q  108 agatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatg 193  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  46311979 agatagcttatagctgaaaagcttgcttattaaaaataatatgtttggtaaaattagctgttgaagtggctgataagtataaaatg 46312064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 27748397 - 27748290
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    |||||||||||||||||   |||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||    
T  27748397 tagctgatgactgatagttgatagtttatagctgaaaaccttgcttattaaaaataatgtatttggtaaaattagctgttgaagtggttgataagtataa 27748298  T
Q  190 aatgacat 197  Q
    ||||||||    
T  27748297 aatgacat 27748290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 77 - 211
Target Start/End: Complemental strand, 38059341 - 38059203
Alignment:
Q  77 ctgatagctgaaaagctagctgatgactgata---gatagcttatagctgaaaag-cttgcttattaaaaataatgtgtttggtaaaattagctgttgaa 172  Q
    |||||||||||||||||||||||| ||||||    ||||| |||||||||||||  || | ||||||||||||||||||||||||||||||| ||||||     
T  38059341 ctgatagctgaaaagctagctgataactgatgactgatagtttatagctgaaaaaactcgtttattaaaaataatgtgtttggtaaaattagttgttgac 38059242  T
Q  173 gtggctgagaagtataaaatgacataaaagaacatgttt 211  Q
    ||| ||||  | |||||||||||||||||||||||||||    
T  38059241 gtgactgattaatataaaatgacataaaagaacatgttt 38059203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 213
Target Start/End: Complemental strand, 31497279 - 31497175
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||||||||||||||||| ||  |||||||||||||||||||||| ||||||||| ||||||| || |||| ||||||||||||||||||||| ||||     
T  31497279 gatagcttatagctgaaaaactcacttattaaaaataatgtgtttgataaaattagttgttgaaatgactgataagtataaaatgacataaaaggacata 31497180  T
Q  209 ttttt 213  Q
    |||||    
T  31497179 ttttt 31497175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 109 - 209
Target Start/End: Original strand, 38814906 - 38815005
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||  |||||||||||||||||||||||||||| |||| | ||||||| ||||||||  ||||| || ||||||||||||||||||||||||    
T  38814906 gatagcttataattgaaaagcttgcttattaaaaataatgtatttgat-aaattagttgttgaagcagctgataaatataaaatgacataaaagaacatg 38815004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 109 - 202
Target Start/End: Original strand, 28954866 - 28954956
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||  ||||||||||   || |||||||||||||||||||||    
T  28954866 gatagctgatagttgaaaagcttgtttattaaaaataatgtgtttggtaaaattaattgttgaagtg---gataagtataaaatgacataaaag 28954956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 2458390 - 2458480
Alignment:
Q  121 ctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgttt 211  Q
    |||||||||| ||| ||||||||||||||||||||||||||||| ||||||| || ||||  | |||||||||||||||||| ||||||||    
T  2458390 ctgaaaagctcgctaattaaaaataatgtgtttggtaaaattagttgttgaaatgactgattaatataaaatgacataaaaggacatgttt 2458480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 4639437 - 4639539
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||||||||| |||||||| | | ||||||||| | | ||| ||||||||||||||||||||| || |||| ||||||||||||||||||||| |||||    
T  4639437 gatagcttataactgaaaagatggtttattaaaattgaagtgcttggtaaaattagctgttgaattgactgataagtataaaatgacataaaaggacatg 4639536  T
Q  209 ttt 211  Q
    |||    
T  4639537 ttt 4639539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 75 - 211
Target Start/End: Complemental strand, 9224520 - 9224388
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaat-aatgtgtttggtaaaattagctgttgaag 173  Q
    ||||||||||||||||||||||| ||  ||    |||||||||||||||||||| | ||| ||||||| | || ||||||||||||||||||||||||||    
T  9224520 agctgatagctgaaaagctagcttatagct----gatagcttatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttgaag 9224425  T
Q  174 tggctgagaagtataaaatgacataaaagaacatgttt 211  Q
    || || | || |||||||| ||||||||| ||||||||    
T  9224424 tgact-ataaatataaaataacataaaaggacatgttt 9224388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 115 - 211
Target Start/End: Original strand, 11756181 - 11756277
Alignment:
Q  115 ttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgttt 211  Q
    |||||||||||||| | | ||||||||| | | ||||||||||||||||| || |||||||||||| ||||| ||||||||||||||| ||||||||    
T  11756181 ttatagctgaaaagatggtttattaaaattgaagtgtttggtaaaattagttgatgaagtggctgataagtaaaaaatgacataaaaggacatgttt 11756277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 93 - 208
Target Start/End: Complemental strand, 31657022 - 31656904
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtata 188  Q
    ||||||||| |||||||   ||||||||||||||||||| | ||| ||||||| |||  |||||||||||||||||||||||||||| || | || ||||    
T  31657022 tagctgatggctgatagctgatagcttatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttgaagtgact-ataaatata 31656924  T
Q  189 aaatgacataaaagaacatg 208  Q
    |||||||||||||| |||||    
T  31656923 aaatgacataaaaggacatg 31656904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 211
Target Start/End: Original strand, 3795392 - 3795513
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtata 188  Q
    ||||||||| |||||||   ||||||||||||||||||  | ||| ||||||| |||  |||||||||||||||||||||||||||| || | || ||||    
T  3795392 tagctgatggctgatagttaatagcttatagctgaaaaattagctgattaaaattaaaagtgtttggtaaaattagctgttgaagtgact-ataaatata 3795490  T
Q  189 aaatgacataaaagaacatgttt 211  Q
    |||||||||||||| ||||||||    
T  3795491 aaatgacataaaaggacatgttt 3795513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 42627651 - 42627787
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgat---agatagcttatagctgaaaagcttgcttattaaaaat-aatgtgtttggtaaaattagctgttg 170  Q
    ||||||||||||||||||||||| ||  |||||    |||||||||||| ||||||| | ||| ||||||| | || |||||||||||||||||||||||    
T  42627651 agctgatagctgaaaagctagcttatagctgatggctgatagcttatagttgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttg 42627750  T
Q  171 aagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||| || | || |||||||| ||||||||| |||||    
T  42627751 aagtgact-ataaatataaaataacataaaaggacatg 42627787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 4639162 - 4639060
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||||||||||| |||||  | | ||||||||| |||  |||||| ||||||||| ||||||||||||||| |||| |||||||||||||||  |||||    
T  4639162 gatagcttatagcagaaaatatagtttattaaaattaaaatgtttgataaaattagttgttgaagtggctgataagtgtaaaatgacataaaaagacatg 4639063  T
Q  209 ttt 211  Q
    |||    
T  4639062 ttt 4639060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 201
Target Start/End: Complemental strand, 27668312 - 27668201
Alignment:
Q  93 tagctgatgactgatagat---agcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtata 188  Q
    |||||||||||||||||||   ||||||||||||||||| | ||| ||||||| |||  |||||||||||||||| ||||||||||| || | || ||||    
T  27668312 tagctgatgactgatagatgatagcttatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattaactgttgaagtgact-ataaatata 27668214  T
Q  189 aaatgacataaaa 201  Q
    |||||||||||||    
T  27668213 aaatgacataaaa 27668201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 93 - 207
Target Start/End: Complemental strand, 34086887 - 34086769
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaa-gcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtata 188  Q
    |||||||||||||||||   |||||||||||||||||| ||| ||||||||||| ||||||||||| |||| ||    |||||||| ||||  || ||||    
T  34086887 tagctgatgactgatagtttatagcttatagctgaaaaagctcgcttattaaaattaatgtgtttgttaaagtttttggttgaagttgctggtaaatata 34086788  T
Q  189 aaatgacataaaagaacat 207  Q
    |||||||||||||| ||||    
T  34086787 aaatgacataaaagtacat 34086769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 75 - 211
Target Start/End: Complemental strand, 42330859 - 42330726
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaa-ataatgtgtttggtaaaattagctgttgaag 173  Q
    ||||| ||||||| ||||||||||||  ||||| |    ||||||||||||||| | ||||||||||| | || |||||||||| |||||| ||||||||    
T  42330859 agctggtagctgataagctagctgatagctgatgg----cttatagctgaaaagttagcttattaaaataaaaagtgtttggtacaattagttgttgaag 42330764  T
Q  174 tggctgagaagtataaaatgacataaaagaacatgttt 211  Q
    | ||||| || ||||||||||| ||||||  |||||||    
T  42330763 tagctgataaatataaaatgacgtaaaagggcatgttt 42330726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 208
Target Start/End: Complemental strand, 4513707 - 4513589
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtata 188  Q
    ||||||||| |||||||   ||| ||||||||||||||| | ||| ||||||| |||  |||||||||||||||||||||||||||| || | || ||||    
T  4513707 tagctgatggctgatagctgataacttatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttgaagtgact-ataaatata 4513609  T
Q  189 aaatgacataaaagaacatg 208  Q
    ||| |||||||||| |||||    
T  4513608 aaaggacataaaaggacatg 4513589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 75 - 205
Target Start/End: Original strand, 5675208 - 5675348
Alignment:
Q  75 agctgatagctgaaaagctagct-------gatgactgatag---atagcttatagctgaaaagcttgcttattaaaa-ataatgtgtttggtaaaatta 163  Q
    |||||||||||||||||||||||       ||||||||||||   ||||||||||||||||||| |  |||||||||| | || ||||||||||| ||||    
T  5675208 agctgatagctgaaaagctagcttatagttgatgactgatagctgatagcttatagctgaaaagttaacttattaaaataaaaagtgtttggtaatatta 5675307  T
Q  164 gctgttgaagtggctgagaagtataaaatgacataaaagaac 205  Q
    | ||||||||  ||||| || ||||||||||| |||||||||    
T  5675308 gttgttgaag-agctgataaatataaaatgacgtaaaagaac 5675348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 208
Target Start/End: Complemental strand, 38667834 - 38667735
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaat-aatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    |||||||||||||||||||| | ||| ||||||| | || ||||||| ||||||||| |||||||||| || | || |||||||||||||||||| ||||    
T  38667834 gatagcttatagctgaaaagttagctgattaaaattaaaagtgtttgataaaattagttgttgaagtgact-ataaatataaaatgacataaaaggacat 38667736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 202
Target Start/End: Complemental strand, 35180496 - 35180373
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaag 173  Q
    ||||| ||||||||||||||||| ||  ||||| | ||    |||||||||||| | ||| ||||||| |||  ||||||||||||||||||||||||||    
T  35180496 agctggtagctgaaaagctagcttatagctgatggtta----atagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttgaag 35180401  T
Q  174 tggctgagaagtataaaatgacataaaag 202  Q
    || || | || ||||||||||||||||||    
T  35180400 tgact-ataaatataaaatgacataaaag 35180373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 4360152 - 4360214
Alignment:
Q  116 tatagctgaaaa-gcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggc 177  Q
    |||||||||||| ||||||||||||||| |||||||| |||||||||| | ||||||||||||    
T  4360152 tatagctgaaaaagcttgcttattaaaattaatgtgtgtggtaaaattggttgttgaagtggc 4360214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 28344712 - 28344654
Alignment:
Q  111 tagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgtt 169  Q
    ||||| ||||||||||||||   |||||||||||||||||||||||||||||| |||||    
T  28344712 tagctgatagctgaaaagctcttttattaaaaataatgtgtttggtaaaattaactgtt 28344654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 208
Target Start/End: Original strand, 39324967 - 39325064
Alignment:
Q  111 tagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||| ||||||| | ||| ||||||| |||  ||||||||||||||||||| |||||||| || | || |||||||||||||||||| |||||    
T  39324967 tagcttatagttgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctattgaagtgact-ataaatataaaatgacataaaaggacatg 39325064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 217
Target Start/End: Complemental strand, 14391068 - 14390960
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    |||||||||||  ||||||| | ||| ||||||| |||  || ||||||||||||||||||||||||| || | || |||||||||||||||||| ||||    
T  14391068 gatagcttataattgaaaagttagctgattaaaattaaaagtatttggtaaaattagctgttgaagtgact-ataaatataaaatgacataaaaggacat 14390970  T
Q  208 gttttttaat 217  Q
    | || |||||    
T  14390969 gcttgttaat 14390960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 44277444 - 44277497
Alignment:
Q  149 tgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    |||||||||||||||||||||||| || |||| || ||||||||||||||||||    
T  44277444 tgtttggtaaaattagctgttgaaatgactgataaatataaaatgacataaaag 44277497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 175
Target Start/End: Original strand, 18544734 - 18544801
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtg 175  Q
    ||||| |||||||||||||| | ||| ||||||| |||  ||||||||||||||||||||||||||||    
T  18544734 gatagtttatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttgaagtg 18544801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 208
Target Start/End: Complemental strand, 5699158 - 5699059
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaat-aatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    |||||||||||||||||||| | ||| ||||||| | || ||||||||||||||||  |||| ||||| || | || ||||||| |||||||||| ||||    
T  5699158 gatagcttatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattaattgttcaagtgact-ataaatataaaacgacataaaaggacat 5699060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 9422487 - 9422551
Alignment:
Q  137 ttaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaa 201  Q
    |||||| ||| |||||||||||| |||| ||| ||||| ||||| || |||||||||||||||||    
T  9422487 ttaaaattaaagtgtttggtaaagttagttgtcgaagtagctgataaatataaaatgacataaaa 9422551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 202
Target Start/End: Complemental strand, 25366452 - 25366322
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagat---agcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttga 171  Q
    ||||||||| ||||||| ||||||||   |||||| |   ||||||| ||||||||||| | | ||| ||| ||| ||||||||||||||||||  || |    
T  25366452 agctgatagttgaaaagttagctgatagttgatagctggaagcttatggctgaaaagctagttgattgaaattaaagtgtttggtaaaattagcatttaa 25366353  T
Q  172 agtggctgagaagtataaaatgacataaaag 202  Q
    | || |||| || |||||||||||| |||||    
T  25366352 aatgactgataaatataaaatgacagaaaag 25366322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 50939579 - 50939674
Alignment:
Q  111 tagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    ||||||||||||||||| || | ||||||||| |||  | |||| |||||||| |||||||| | ||| | || ||||||||||||| |||||||||    
T  50939579 tagcttatagctgaaaa-ctagtttattaaaattaaaatatttgataaaattaactgttgaattagcttataaatataaaatgacattaaagaacat 50939674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 175
Target Start/End: Complemental strand, 20470247 - 20470180
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtg 175  Q
    |||||||||||||| ||||| | ||| ||||||| |||  ||||||||||||||||||| ||||||||    
T  20470247 gatagcttatagctaaaaagttagctgattaaaattaaaagtgtttggtaaaattagctattgaagtg 20470180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 195
Target Start/End: Original strand, 18034220 - 18034306
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgac 195  Q
    |||| |||||| |||||||| | ||||||| ||| ||| ||||||||||||||||| |||||| ||  || | || |||||||||||    
T  18034220 gataacttatatctgaaaagttagcttatttaaattaaagtgtttggtaaaattagttgttgaggtaactaataaatataaaatgac 18034306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 202
Target Start/End: Complemental strand, 41865924 - 41865838
Alignment:
Q  117 atagctgaaaagcttgcttattaaaa-ataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    |||||||||||| | ||||||||| | | || ||||||||||||||||| | || |||||||| | || ||||||||||| ||||||    
T  41865924 atagctgaaaagttagcttattaatataaaaagtgtttggtaaaattagttattcaagtggctcataaatataaaatgacgtaaaag 41865838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 197
Target Start/End: Original strand, 44299322 - 44299371
Alignment:
Q  148 gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacat 197  Q
    ||||| |||||||||||  |||||||||||| | ||||||||||||||||    
T  44299322 gtgttcggtaaaattagtcgttgaagtggctaataagtataaaatgacat 44299371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 40942470 - 40942418
Alignment:
Q  149 tgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaa 201  Q
    ||||||||||||||||| |||||| |  |||| || |||||||||||||||||    
T  40942470 tgtttggtaaaattagcggttgaactaactgacaaatataaaatgacataaaa 40942418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 46743056 - 46743008
Alignment:
Q  153 tggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaa 201  Q
    |||||||||||| |||| |||||||||| || ||||||||||| |||||    
T  46743056 tggtaaaattagttgttcaagtggctgataaatataaaatgacgtaaaa 46743008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 4e-56; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 75 - 234
Target Start/End: Original strand, 30317238 - 30317393
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagt 174  Q
    ||||||||| ||||||| ||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30317238 agctgatagatgaaaagttagctgatgactgata----gcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagt 30317333  T
Q  175 ggctgagaagtataaaatgacataaaagaacatgttttttaatatacatatagacacaca 234  Q
    |||||| ||||||||||||||||||||  || | ||||||||||||||||| ||||||||    
T  30317334 ggctgataagtataaaatgacataaaatgactttttttttaatatacatattgacacaca 30317393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 75 - 234
Target Start/End: Original strand, 8320719 - 8320880
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagt 174  Q
    ||||||||||||||||||||||||||  ||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8320719 agctgatagctgaaaagctagctgatagct----gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagt 8320814  T
Q  175 ggctgagaagtataaaatgacataaaagaacatg------ttttttaatatacatatagacacaca 234  Q
    |||||| ||||||||||||||||||||| |||||      ||||||||||||||||||||||||||    
T  8320815 ggctgataagtataaaatgacataaaaggacatgttttttttttttaatatacatatagacacaca 8320880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 93 - 214
Target Start/End: Complemental strand, 8880199 - 8880075
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8880199 tagctgatgactgatagctgatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataa 8880100  T
Q  190 aatgacataaaagaacatgtttttt 214  Q
    |||||||||||||||||||||||||    
T  8880099 aatgacataaaagaacatgtttttt 8880075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 93 - 234
Target Start/End: Complemental strand, 36238681 - 36238531
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  36238681 tagctgatgactgatagttgatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataa 36238582  T
Q  190 aatgacataaaagaacatgtt------ttttaatatacatatagacacaca 234  Q
    ||||||||||||| |||||||      ||||||||||||||||||||||||    
T  36238581 aatgacataaaaggacatgttttttttttttaatatacatatagacacaca 36238531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 34435298 - 34435426
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaaca-- 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||      
T  34435298 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgataaatataaaatgacataaaaggacata 34435397  T
Q  207 -tgttttttaatatacatatagacacaca 234  Q
     | ||||||||||||||||||||||||||    
T  34435398 tttttttttaatatacatatagacacaca 34435426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 109 - 214
Target Start/End: Complemental strand, 1362496 - 1362391
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  1362496 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgacataaaaggacatg 1362397  T
Q  209 tttttt 214  Q
    ||||||    
T  1362396 tttttt 1362391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 93 - 234
Target Start/End: Complemental strand, 35406390 - 35406241
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    |||||||||||||||||   |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  35406390 tagctgatgactgatagttgatagtttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataa 35406291  T
Q  190 aatgacataaaagaaca-----tgttttttaatatacatatagacacaca 234  Q
    ||||||||||| | |||     | ||||||||||||||||||||||||||    
T  35406290 aatgacataaagggacatttttttttttttaatatacatatagacacaca 35406241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 30741157 - 30741286
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||| |||||    
T  30741157 gatagtttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtgactgataagtataaaaggacataaaaggacatg 30741256  T
Q  209 ----ttttttaatatacatatagacacaca 234  Q
        ||||||||||||||||||||||||||    
T  30741257 ttttttttttaatatacatatagacacaca 30741286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 51063660 - 51063533
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaaca-- 206  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||      
T  51063660 gatagcttataactgaaaagcttgcttattaaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataaaatgacataaaaggacatt 51063561  T
Q  207 tgttttttaatatacatatagacacaca 234  Q
    | ||||||||||||||||| ||||||||    
T  51063560 ttttttttaatatacatatggacacaca 51063533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 41990961 - 41991089
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| || |||||||||||||||||| |||||    
T  41990961 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttaaagttgctgataaatataaaatgacataaaaggacatg 41991060  T
Q  209 ---ttttttaatatacatatagacacaca 234  Q
       |||||||||||| |||||||||||||    
T  41991061 tttttttttaatatatatatagacacaca 41991089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 93 - 231
Target Start/End: Original strand, 2557162 - 2557306
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||    
T  2557162 tagctgatgactgatagctgatagcttatagctgaaaagcttgcttattaaaaataatgtgtttgataaaattagctgttaaagtggctgataagtataa 2557261  T
Q  190 aatgacataaaagaaca---tgttttttaatatacatatagacac 231  Q
    ||| ||||||||  |||   | ||||||||| |||||||||||||    
T  2557262 aataacataaaaagacatttttttttttaatgtacatatagacac 2557306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 124 - 214
Target Start/End: Complemental strand, 17667562 - 17667472
Alignment:
Q  124 aaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgtttttt 214  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||| |||||||||||    
T  17667562 aaaagcttgcttattaaaaatgatgtgtttggtaaaattagatgttgaagtggctaataagtataaaatgacataaaaggacatgtttttt 17667472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 52184293 - 52184400
Alignment:
Q  93 tagctgatgactgata---gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    ||||| ||||||||||   |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| | ||||||    
T  52184293 tagctaatgactgatatctgataacttatagctgaaaagcttgcttattaaaaataacgtgtttggtaaaattagttgttgaagtggctgataggtataa 52184392  T
Q  190 aatgacat 197  Q
    ||||||||    
T  52184393 aatgacat 52184400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 54462731 - 54462838
Alignment:
Q  93 tagctgatgactgata---gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    |||||||||| |||||   ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| || |||||    
T  54462731 tagctgatgagtgataactgatagctgatagctgaaaagcttgcttaataaaaataatgtgtttggtaaaattagttgttgaagtggctgataaatataa 54462830  T
Q  190 aatgacat 197  Q
    ||||||||    
T  54462831 aatgacat 54462838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 19275882 - 19275779
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    ||||||||||| |||||   ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    ||||||||||| ||||||||    
T  19275882 tagctgatgacggatagctgatagcttatagttgaaaagcttgcttattaaaaataatgtgtttggtaaaattagc----gaagtggctgataagtataa 19275787  T
Q  190 aatgacat 197  Q
    ||||||||    
T  19275786 aatgacat 19275779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 109 - 198
Target Start/End: Complemental strand, 7042489 - 7042400
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacata 198  Q
    |||||||||||||||||||| ||| ||||||||| | | | ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7042489 gatagcttatagctgaaaagattgtttattaaaattgaagggtttggtaaaattagctgttgaagtggctgataagtataaaatgacata 7042400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 110 - 211
Target Start/End: Complemental strand, 42878569 - 42878468
Alignment:
Q  110 atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgt 209  Q
    |||||||| |||||||||| | | ||||||||| | | ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  42878569 atagcttacagctgaaaagatggtttattaaaattgaagtgttaggtaaaattagctgttgaagtggctgataagtataaaatgacataaaaggacatgt 42878470  T
Q  210 tt 211  Q
    ||    
T  42878469 tt 42878468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 197
Target Start/End: Complemental strand, 51761657 - 51761570
Alignment:
Q  110 atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacat 197  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||| ||||  | |||||||||||||    
T  51761657 atagcttatagctgaaaagctcgcttattaaaaataatgtgtttggtaacattagttgttgaagtgactgattaatataaaatgacat 51761570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 54598842 - 54598751
Alignment:
Q  117 atagctgaaaagcttgcttattaaaaataatgtgtttggt-aaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    |||||||||||||| | ||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||| ||||||||| ||||    
T  54598842 atagctgaaaagctcgtttattaaaaataatgtgtttggtaaaaattagttgttgaagtggctgataagtataaaataacataaaaggacat 54598751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 111 - 208
Target Start/End: Complemental strand, 46115675 - 46115577
Alignment:
Q  111 tagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||| | ||||||||||| |||  |||||||||||||||||||||||||||| |||| || |||||||||||||||||| |||||    
T  46115675 tagcttatagctgaaaagttagcttattaaaattaaaagtgtttggtaaaattagctgttgaagtgactgataaatataaaatgacataaaaggacatg 46115577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 111 - 208
Target Start/End: Complemental strand, 46116342 - 46116244
Alignment:
Q  111 tagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||| | ||||||||||| |||  |||||||||||||||||||||||||||| |||| || |||||||||||||||||| |||||    
T  46116342 tagcttatagctgaaaagttagcttattaaaattaaaagtgtttggtaaaattagctgttgaagtgactgataaatataaaatgacataaaaggacatg 46116244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 109 - 197
Target Start/End: Original strand, 50937578 - 50937666
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacat 197  Q
    |||||||||||||||||||| | | ||||||||| ||| ||||||||||||||||| |||||||||| |||| ||||||||||||||||    
T  50937578 gatagcttatagctgaaaagatggtttattaaaattaaagtgtttggtaaaattagatgttgaagtgactgataagtataaaatgacat 50937666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 93 - 211
Target Start/End: Original strand, 25998443 - 25998564
Alignment:
Q  93 tagctgatgactgatagat---agcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    ||||||||||||||||| |   |||||||||||||||| ||   ||||||||| ||||||||||||||||||||| |||||||||| ||||  | |||||    
T  25998443 tagctgatgactgatagctgacagcttatagctgaaaaactcatttattaaaagtaatgtgtttggtaaaattagttgttgaagtgactgattaatataa 25998542  T
Q  190 aatgacataaaagaacatgttt 211  Q
    ||||||||||||  ||||||||    
T  25998543 aatgacataaaaagacatgttt 25998564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 75 - 207
Target Start/End: Complemental strand, 5506672 - 5506536
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatag---atagcttatagctgaaaa-gcttgcttattaaaaataatgtgtttggtaaaattagctgttg 170  Q
    ||||||||||||||||||||||  || |||||| |   |||||||||||||||||| ||| ||||||||||| |||||||||||||||| || |  ||||    
T  5506672 agctgatagctgaaaagctagcatataactgatggctgatagcttatagctgaaaaagctcgcttattaaaattaatgtgtttggtaaagttggtggttg 5506573  T
Q  171 aagtggctgagaagtataaaatgacataaaagaacat 207  Q
    |||| ||||  || |||||||||||||||||| ||||    
T  5506572 aagttgctggtaaatataaaatgacataaaagtacat 5506536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 43861499 - 43861397
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||||  | | ||||||||| | | ||||||||||||||||| ||||||||| ||||| |||||| |||||||||||||| |||||    
T  43861499 gatagcttatagctgaaaaaatggtttattaaaattgaagtgtttggtaaaattagatgttgaagtagctgataagtattaaatgacataaaaggacatg 43861400  T
Q  209 ttt 211  Q
    |||    
T  43861399 ttt 43861397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 48072801 - 48072699
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||| |||||||||| ||   ||||||||| | | ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||  |||||    
T  48072801 gatagcttgtagctgaaaaactgatttattaaaattgaagtgtttggtaaaattagctgttgaagtggctgataagtataaaataacataaaatgacatg 48072702  T
Q  209 ttt 211  Q
    |||    
T  48072701 ttt 48072699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 197
Target Start/End: Complemental strand, 6125542 - 6125453
Alignment:
Q  108 agatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacat 197  Q
    |||||||||||||||||||| || | ||||||||||||||||||||||||||||||  |||||||||| ||||  | |||||||||||||    
T  6125542 agatagcttatagctgaaaaactcgtttattaaaaataatgtgtttggtaaaattaattgttgaagtgactgattaatataaaatgacat 6125453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 217
Target Start/End: Original strand, 45355819 - 45355928
Alignment:
Q  109 gatagcttatagctgaaaa-gcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    ||||||||||||||||||| ||| ||||||||||| ||| |||||||||||| |||| ||| ||||| ||||| || |||||||||||||||||| | ||    
T  45355819 gatagcttatagctgaaaaagctagcttattaaaattaaagtgtttggtaaagttagttgtcgaagtagctgataaatataaaatgacataaaagtatat 45355918  T
Q  208 gttttttaat 217  Q
    |||| |||||    
T  45355919 gtttcttaat 45355928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 4071508 - 4071394
Alignment:
Q  89 aagctagctgatgactgata-gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtat 187  Q
    ||||||||||||  |||||| | |||||  ||||||||||| | ||||||||||| ||| |||||||||||||||| |||||||| | ||||| || |||    
T  4071508 aagctagctgatagctgataagctagctggtagctgaaaagttagcttattaaaattaaagtgtttggtaaaattaactgttgaaatagctgacaaatat 4071409  T
Q  188 aaaatgacataaaag 202  Q
    |||||||||||||||    
T  4071408 aaaatgacataaaag 4071394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 93 - 208
Target Start/End: Complemental strand, 38732821 - 38732703
Alignment:
Q  93 tagctgatgactgata---gatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtata 188  Q
    ||||||||| ||||||   |||||||||||||||||||| | ||| ||||||| |||  |||||||||||||||||||||||||||| || | || ||||    
T  38732821 tagctgatggctgataactgatagcttatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttgaagtgact-ataaatata 38732723  T
Q  189 aaatgacataaaagaacatg 208  Q
    |||||||||||||| |||||    
T  38732722 aaatgacataaaaggacatg 38732703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 40373928 - 40374057
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaat-aatgtgtttggtaaaattagctgttgaag 173  Q
    ||||||||| ||||||||||||| ||  ||    |||||||||||||||||||| | ||| ||||||| | || ||||||||||||||||||||||||||    
T  40373928 agctgatagttgaaaagctagcttatagct----gatagcttatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttgaag 40374023  T
Q  174 tggctgagaagtataaaatgacataaaagaacatg 208  Q
    || || | || |||||||||||||||||| |||||    
T  40374024 tgact-ataaatataaaatgacataaaaggacatg 40374057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 200
Target Start/End: Original strand, 2228545 - 2228636
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaa 200  Q
    ||||| |||||||||||||| | | ||||||||| | | ||||||||||||||||| |||||||||| |||| ||||||||||||| |||||    
T  2228545 gatagtttatagctgaaaagatggtttattaaaattgaagtgtttggtaaaattagatgttgaagtgactgataagtataaaatgaaataaa 2228636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 6586958 - 6586822
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgat---agatagcttatagctgaaaagcttgcttattaaaaat-aatgtgtttggtaaaattagctgttg 170  Q
    ||||||||||||||||||||||| ||  |||||    ||||||| |||||||||||| | ||| ||||||| | || ||||| |||||||||||||||||    
T  6586958 agctgatagctgaaaagctagcttatagctgatggctgatagctgatagctgaaaagttagctgattaaaattaaaagtgttcggtaaaattagctgttg 6586859  T
Q  171 aagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||| || | || |||||||||||||||||| |||||    
T  6586858 aagtgact-ataaatataaaatgacataaaaggacatg 6586822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 195
Target Start/End: Complemental strand, 12765305 - 12765181
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaa-ataatgtgtttggtaaaattagctgttg 170  Q
    ||||||||| |||||||||||||| |  ||||| |   |||| |||||||||||||| | ||||||||||| | || ||||||||||||||||| ||||     
T  12765305 agctgatagttgaaaagctagctggtagctgatggctgatagtttatagctgaaaagttagcttattaaaataaaaagtgtttggtaaaattagttgttc 12765206  T
Q  171 aagtggctgagaagtataaaatgac 195  Q
    |||||||||| || |||||||||||    
T  12765205 aagtggctgataaatataaaatgac 12765181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 23091111 - 23091169
Alignment:
Q  144 taatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    |||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  23091111 taatgtgtttggtaaaattaactgttgaaggggctgataagtataaaatgacataaaag 23091169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 202
Target Start/End: Original strand, 32999114 - 32999208
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaa-ataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    ||||| |||||||||||||| | ||||||||||| | || |||||||||||||||| ||||| |||||||||| || ||||||||||| ||||||    
T  32999114 gatagtttatagctgaaaagttagcttattaaaataaaaagtgtttggtaaaattaactgttcaagtggctgataaatataaaatgacgtaaaag 32999208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 35555162 - 35555087
Alignment:
Q  134 ttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgtt 210  Q
    ||||||||||||||||||||||||||||||| |||||||||  |||| |  |||||||||||||||||| |||||||    
T  35555162 ttattaaaaataatgtgtttggtaaaattagttgttgaagt-actgatacatataaaatgacataaaaggacatgtt 35555087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 36659555 - 36659691
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttg 170  Q
    ||||||||||||||||||||||| ||  ||||| |   || ||||||| |||||||| | ||| ||||||| |||  |||||||||||||||||||||||    
T  36659555 agctgatagctgaaaagctagcttatagctgatggctgatggcttataactgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttg 36659654  T
Q  171 aagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||| || | || ||||||||| |||||||| |||||    
T  36659655 aagtgact-ataaatataaaatggcataaaaggacatg 36659691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 39130852 - 39130739
Alignment:
Q  84 ctgaaaagctagctgatgactgata---gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctga 180  Q
    ||||||| |||||||||| || |||   |||||||||||||| ||||| | | ||||||||| | | ||||| ||||||||||| |||||||||| ||||    
T  39130852 ctgaaaaactagctgatgtcttataactgatagcttatagctaaaaagatggtttattaaaactgaagtgttaggtaaaattagatgttgaagtgactga 39130753  T
Q  181 gaagtataaaatga 194  Q
     |||||||||||||    
T  39130752 taagtataaaatga 39130739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 50936525 - 50936424
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||||  |   ||||||||| | | ||||||||||||||||| ||||||| || || | ||||||||||||||||||||| |||||    
T  50936525 gatagcttatagctgaaaaa-tcatttattaaaattgaagtgtttggtaaaattagttgttgaaatgactaataagtataaaatgacataaaaggacatg 50936427  T
Q  209 ttt 211  Q
    |||    
T  50936426 ttt 50936424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 197
Target Start/End: Complemental strand, 22978811 - 22978726
Alignment:
Q  112 agcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacat 197  Q
    ||||||||||||||||| | | ||||||||| | | ||||||||||||||||| ||  ||||||||||| |||||||||| |||||    
T  22978811 agcttatagctgaaaagatggtttattaaaattgaagtgtttggtaaaattagttgaagaagtggctgataagtataaaaggacat 22978726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 46669020 - 46668891
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaag 173  Q
    ||||||| ||||||||||||||| ||  ||||| | ||    |||||||||||| | ||| ||||||| |||  ||||||||||||||||||||||||||    
T  46669020 agctgatggctgaaaagctagcttatagctgatggcta----atagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttgaag 46668925  T
Q  174 tggctgagaagtataaaatgacataaaagaacatg 208  Q
    || || | || |||||||||||||||||| |||||    
T  46668924 tgact-ataaatataaaatgacataaaaggacatg 46668891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 208
Target Start/End: Original strand, 35324255 - 35324354
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    ||||||| |||||||||||| | ||| ||||||| |||  ||||||||||||||||| |||||||||| || | || |||||||||||||||||| ||||    
T  35324255 gatagctgatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagttgttgaagtgact-ataaatataaaatgacataaaaggacat 35324353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 201
Target Start/End: Original strand, 42166645 - 42166737
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaa 201  Q
    |||||||||||||||||||  | | || |||||| | | ||||||| ||||||||| ||||||||  ||||| ||||||||||||||||||||    
T  42166645 gatagcttatagctgaaaaaatggtttgttaaaattgaagtgtttgataaaattagatgttgaagcagctgataagtataaaatgacataaaa 42166737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 7475187 - 7475289
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    |||||||||||||||||||| | ||| ||||||| |||  |||||| |||||||| | | |||||||| || | || |||||||||||||||||||||||    
T  7475187 gatagcttatagctgaaaagttagctgattaaaattaaaagtgtttagtaaaatttgtttttgaagtgact-ataaatataaaatgacataaaagaacat 7475285  T
Q  208 gttt 211  Q
    ||||    
T  7475286 gttt 7475289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 138 - 197
Target Start/End: Original strand, 20585704 - 20585763
Alignment:
Q  138 taaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacat 197  Q
    |||||||||||| |||||||||||||| ||||||||||||| | |||||||||| |||||    
T  20585704 taaaaataatgtatttggtaaaattagttgttgaagtggctcataagtataaaaggacat 20585763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 110 - 208
Target Start/End: Complemental strand, 36807572 - 36807474
Alignment:
Q  110 atagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||| |||||||||||| | ||| ||||||| |||  ||||||||||||||||| |||||||||| || | || |||||||||||||||||| |||||    
T  36807572 atagctgatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagttgttgaagtgact-ataaatataaaatgacataaaaggacatg 36807474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 197
Target Start/End: Complemental strand, 45355689 - 45355604
Alignment:
Q  112 agcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacat 197  Q
    ||||||||||||||||| | ||| ||| ||| ||| || ||||||||||||||||||| |||||| ||  || |||||||||||||    
T  45355689 agcttatagctgaaaagttagctgattgaaattaaagtatttggtaaaattagctgttaaagtggttgctaaatataaaatgacat 45355604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 51981642 - 51981591
Alignment:
Q  111 tagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaatt 162  Q
    ||||| ||||||||||||||  |||||||||||||||||||||| |||||||    
T  51981642 tagctgatagctgaaaagctcacttattaaaaataatgtgtttgataaaatt 51981591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 211
Target Start/End: Original strand, 12122311 - 12122450
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaa-ataatgtgtttggtaaaattagctgttg 170  Q
    |||||||||||||||||||| || ||  ||||| |   |||||| ||| |||||||| | ||||||||||| | || |||||| |||||||||| |||||    
T  12122311 agctgatagctgaaaagctaacttatagctgatggctgatagctgataactgaaaagttagcttattaaaataaaaagtgtttagtaaaattagttgttg 12122410  T
Q  171 aagtggctgagaagtataaaatgacataaaagaacatgttt 211  Q
     ||| ||||| || ||||||||||| ||||||  |||||||    
T  12122411 -agtagctgataaatataaaatgacgtaaaagggcatgttt 12122450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 36545381 - 36545320
Alignment:
Q  136 attaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacat 197  Q
    ||||||||||||||||||| ||||||||| ||||||| || ||||  | |||||||||||||    
T  36545381 attaaaaataatgtgtttgataaaattaggtgttgaaatgactgatgaatataaaatgacat 36545320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 36562933 - 36562994
Alignment:
Q  136 attaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacat 197  Q
    ||||||||||||||||||| ||||||||| ||||||| || ||||  | |||||||||||||    
T  36562933 attaaaaataatgtgtttgataaaattaggtgttgaaatgactgatgaatataaaatgacat 36562994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 201
Target Start/End: Complemental strand, 52959954 - 52959901
Alignment:
Q  148 gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaa 201  Q
    |||||||||||||||| ||| |||||| ||||| || |||||||||||||||||    
T  52959954 gtgtttggtaaaattaactgctgaagtagctgataaatataaaatgacataaaa 52959901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 32111013 - 32111104
Alignment:
Q  117 atagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||| | ||| ||||||| |||  ||||||| ||||||||| |||||||||| || | || |||||||||||||||||| |||||    
T  32111013 atagctgaaaagttagctgattaaaattaaaagtgtttgataaaattagatgttgaagtgact-ataaatataaaatgacataaaaggacatg 32111104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 32389572 - 32389663
Alignment:
Q  117 atagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||| | ||| ||||||| |||  ||||| |||||||||| ||||||||||| || | || |||||||||||||||||| |||||    
T  32389572 atagctgaaaagttagctgattaaaattaaaagtgttcggtaaaattaactgttgaagtgact-ataaatataaaatgacataaaaggacatg 32389663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 50197388 - 50197448
Alignment:
Q  148 gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||||||||||||||||| ||||| ||  ||| || |||||||||||||||||| |||||    
T  50197388 gtgtttggtaaaattagcttttgaaatgagtgataaatataaaatgacataaaagtacatg 50197448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 43967201 - 43967252
Alignment:
Q  148 gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataa 199  Q
    ||||||||||||||||||| ||||| ||  ||| ||||||||||||||||||    
T  43967201 gtgtttggtaaaattagcttttgaaatgagtgataagtataaaatgacataa 43967252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 175
Target Start/End: Complemental strand, 47133537 - 47133474
Alignment:
Q  112 agcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtg 175  Q
    |||||||||||||||||||  || || |||| ||| ||||||||||||||||| | ||||||||    
T  47133537 agcttatagctgaaaagctaactgatgaaaattaaagtgtttggtaaaattagtttttgaagtg 47133474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 195
Target Start/End: Complemental strand, 48747988 - 48747941
Alignment:
Q  148 gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgac 195  Q
    |||||||||||||||| |||||||||| ||||| || |||||||||||    
T  48747988 gtgtttggtaaaattaactgttgaagtagctgataaatataaaatgac 48747941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 173
Target Start/End: Original strand, 12121579 - 12121679
Alignment:
Q  77 ctgatagctgaaaagctagctgatgactgata---gatagcttatagctgaaaagcttgcttattaaaa-ataatgtgtttggtaaaattagctgttgaa 172  Q
    ||||||||||||||||||||| ||   ||||    |||||||||||||||||||| |  |||||||||| | || ||||||||||| ||||| |||||||    
T  12121579 ctgatagctgaaaagctagcttatagttgatgactgatagcttatagctgaaaagttaacttattaaaataaaaagtgtttggtaatattagttgttgaa 12121678  T
Q  173 g 173  Q
    |    
T  12121679 g 12121679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 42218336 - 42218282
Alignment:
Q  148 gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    |||||||||||||||||| |||||| | ||||| || | ||||||||||||||||    
T  42218336 gtgtttggtaaaattagcggttgaactagctgataaatgtaaaatgacataaaag 42218282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 107
Target Start/End: Complemental strand, 51761702 - 51761670
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgat 107  Q
    |||||||||||||||||||||||||| ||||||    
T  51761702 agctgatagctgaaaagctagctgataactgat 51761670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 1e-55; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 75 - 234
Target Start/End: Complemental strand, 7455346 - 7455179
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttga 171  Q
    ||||||||||||||||||||||||||  ||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7455346 agctgatagctgaaaagctagctgatagctggtagctgatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttga 7455247  T
Q  172 agtggctgagaagtataaaatgacataaaagaacatgtt-----ttttaatatacatatagacacaca 234  Q
    ||||||||| || |||||||||||||||||| |||||||     ||||||||||||||||||||||||    
T  7455246 agtggctgataaatataaaatgacataaaaggacatgtttttttttttaatatacatatagacacaca 7455179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 77 - 234
Target Start/End: Original strand, 36935338 - 36935499
Alignment:
Q  77 ctgatagctgaaaagctagctgatgactgata---gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaag 173  Q
    ||||||||||||||||||||||||  |||||    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  36935338 ctgatagctgaaaagctagctgatagctgatgactgatagcttatagctaaaaaacttgcttattaaaaataatgtgtttggtaaaattagctgttgaag 36935437  T
Q  174 tggctgagaagtataaaatgacataaaagaac-atgttttttaatatacatatagacacaca 234  Q
    ||||||| ||||||||||||||||||||| ||  | |||||||||||||||||| |||||||    
T  36935438 tggctgataagtataaaatgacataaaagtacttttttttttaatatacatataaacacaca 36935499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 93 - 234
Target Start/End: Original strand, 36985930 - 36986079
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    |||||||||||||||||   |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  36985930 tagctgatgactgatagctgatagcttatagctgaaaatcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataa 36986029  T
Q  190 aatgacataaaagaacatg-----ttttttaatatacatatagacacaca 234  Q
    |||||||||||||  ||||     ||||||||||||||||||||||||||    
T  36986030 aatgacataaaaggtcatgtttttttttttaatatacatatagacacaca 36986079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 75 - 214
Target Start/End: Complemental strand, 38325144 - 38325002
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgata---gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttga 171  Q
    ||||||||||||||||||||||||||  |||||    ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  38325144 agctgatagctgaaaagctagctgatagctgatgactgatagctgatagctgaaaagcttacttattaaaaataatgtgtttggtaaaattagctgttga 38325045  T
Q  172 agtggctgagaagtataaaatgacataaaagaacatgtttttt 214  Q
    ||||||||| ||||||||||||||||||||  |||||||||||    
T  38325044 agtggctgataagtataaaatgacataaaaagacatgtttttt 38325002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 89 - 207
Target Start/End: Complemental strand, 18240155 - 18240035
Alignment:
Q  89 aagctagctgatgactgatagat--agcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagta 186  Q
    |||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  18240155 aagctagctgatgactgatagatgtagcttatagctgaaaagctttcttattaaaaataatgtgtttggtaaaattagctgttggagtggctgataagta 18240056  T
Q  187 taaaatgacataaaagaacat 207  Q
    |||||||||||||||| ||||    
T  18240055 taaaatgacataaaaggacat 18240035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 111 - 215
Target Start/End: Complemental strand, 42520577 - 42520473
Alignment:
Q  111 tagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgtt 210  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  42520577 tagctgatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgacaagtataaaatgacataaaaggacatgtt 42520478  T
Q  211 tttta 215  Q
    |||||    
T  42520477 tttta 42520473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 108 - 234
Target Start/End: Complemental strand, 14958885 - 14958761
Alignment:
Q  108 agatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||     
T  14958885 agatagcttatagctgaaaaatttgcttattaaaaataatatgtttggtaaaattagttgttgaagtggctgataagtataaaatgacataaaaggaca- 14958787  T
Q  208 gttttttaatatacatatagacacaca 234  Q
     ||||||||||||||||||||||||||    
T  14958786 -ttttttaatatacatatagacacaca 14958761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 1875296 - 1875424
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||  |||||    
T  1875296 gatagctgatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgataaatataaaatgacataaaatgacatg 1875395  T
Q  209 ---ttttttaatatacatatagacacaca 234  Q
       ||||||||||||||||||||| ||||    
T  1875396 tttttttttaatatacatatagacgcaca 1875424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 93 - 234
Target Start/End: Complemental strand, 10034437 - 10034288
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    |||||||||||||||||   |||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||    
T  10034437 tagctgatgactgatagctaatagtttatagctgaaaaacttgcttattaaaaataatgtgtttggtaaaattagttgttgaagtggttgataagtataa 10034338  T
Q  190 aatgacataaaagaaca-----tgttttttaatatacatatagacacaca 234  Q
    ||||||||||||| |||     | ||||||||||||||||||||||||||    
T  10034337 aatgacataaaaggacatttttttttttttaatatacatatagacacaca 10034288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 70 - 202
Target Start/End: Complemental strand, 5774920 - 5774778
Alignment:
Q  70 aaataagctgatagctgaaaagctagctgat-------gactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaa 159  Q
    |||| ||||||||||||||||||||||||||       |||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5774920 aaattagctgatagctgaaaagctagctgatagctggtgactgatagctaatagctgatagctgaaaagcttgcttattaaaaataatgtgtttggtaaa 5774821  T
Q  160 attagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    ||||| ||||||||||||||| |||||||||||||||||||||    
T  5774820 attagttgttgaagtggctgataagtataaaatgacataaaag 5774778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 16495898 - 16496028
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||| ||| ||| |||||    
T  16495898 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtgactgataaatataaaatgatatataaggacatg 16495997  T
Q  209 -----ttttttaatatacatatagacacaca 234  Q
         ||||||||||||||||||||||||||    
T  16495998 tttttttttttaatatacatatagacacaca 16496028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 93 - 234
Target Start/End: Complemental strand, 30524462 - 30524314
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    |||||| ||||||||||   ||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||    
T  30524462 tagctggtgactgatagctgatagcttatagctaaaaagcttgcttattaaaaataatgt-tttggtaaaattagttgttgaagtggctgataagtataa 30524364  T
Q  190 aatgacataaaagaacatgtttttt-----aatatacatatagacacaca 234  Q
    |||||||||||||||| | ||||||     ||||||||||||||||||||    
T  30524363 aatgacataaaagaactttttttttttttaaatatacatatagacacaca 30524314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 111 - 234
Target Start/End: Complemental strand, 34246122 - 34245997
Alignment:
Q  111 tagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag--aacatg 208  Q
    ||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| || ||||||||||||||||||   | ||     
T  34246122 tagctgatagctgaaaagcttgcttattaaaaataatgtttttgttaaaattagctgttgaagtggctgataaatataaaatgacataaaaggatatatt 34246023  T
Q  209 ttttttaatatacatatagacacaca 234  Q
    ||||||||||||||||||||||||||    
T  34246022 ttttttaatatacatatagacacaca 34245997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 75 - 202
Target Start/End: Original strand, 15264766 - 15264896
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttga 171  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||||||||||| | |||||||||||||||| |||||| ||||||||||||||||    
T  15264766 agctgatagctgaaaagctagctgatgactgatagctgatagcttatagctgaaaagttcgcttattaaaaataatatgtttgataaaattagctgttga 15264865  T
Q  172 agtggctgagaagtataaaatgacataaaag 202  Q
    |||| ||||  | |||||||||| |||||||    
T  15264866 agtgactgattaatataaaatgatataaaag 15264896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 39239898 - 39239995
Alignment:
Q  117 atagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgtttttt 214  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||  |||| ||||||    
T  39239898 atagctgaaaagcttgcttattaaaaataacgtgtttggtaaaattagttgttgaagtggctgataagtataaaatgacataaaatgacatttttttt 39239995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 8876444 - 8876326
Alignment:
Q  119 agctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaac---atgtttttta 215  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| | ||||||| ||    | |||||||    
T  8876444 agctgaaaaacttgcttattaaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataaaataagataaaaggactctttttttttta 8876345  T
Q  216 atatacatatagacacaca 234  Q
    |||||||||||||||||||    
T  8876344 atatacatatagacacaca 8876326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 6321352 - 6321454
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||| ||||||| | | ||||||||| | | ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  6321352 gatagcttatagttgaaaagatggtttattaaaattgaagtgtttgataaaattagctgttgaagtggctgataagtataaaatgacataaaaggacatg 6321451  T
Q  209 ttt 211  Q
    |||    
T  6321452 ttt 6321454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 14454116 - 14454218
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||||||||| |||||||| | | ||||||||| | | ||||||||||||||||| ||||||||||||| | ||||||||||||||||||||| |||||    
T  14454116 gatagcttatatctgaaaagatggtttattaaaattgaagtgtttggtaaaattagttgttgaagtggctaataagtataaaatgacataaaaggacatg 14454215  T
Q  209 ttt 211  Q
    |||    
T  14454216 ttt 14454218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 33179720 - 33179618
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||| ||||||| | | ||||||||| | | ||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||| |||||    
T  33179720 gatagcttataggtgaaaagatggtttattaaaattgaagtgtttgataaaattagctgttgaagtggttgataagtataaaatgacataaaaggacatg 33179621  T
Q  209 ttt 211  Q
    |||    
T  33179620 ttt 33179618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 109 - 202
Target Start/End: Complemental strand, 18247473 - 18247380
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    |||||||||||||||||||| | | ||||||||| | | ||||||||||||||||| |||||||||| |||| |||||||||||||||||||||    
T  18247473 gatagcttatagctgaaaagatggtttattaaaattgaagtgtttggtaaaattagttgttgaagtgactgataagtataaaatgacataaaag 18247380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 45377562 - 45377465
Alignment:
Q  110 atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    |||||| |||||||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| || |||| || |||||||||||||||||| ||||    
T  45377562 atagctgatagctgaaaagctagcttattaaaattaaagtgtttgataaaattagctgttgaaatgactgataaatataaaatgacataaaagtacat 45377465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 93 - 203
Target Start/End: Complemental strand, 37241857 - 37241743
Alignment:
Q  93 tagctgatgactgatagatag---cttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtata 188  Q
    ||||||||||||||||| |||   ||||||| ||||||||| ||||||||||| |||  |||||||||||||||||||||||||||| |||| || ||||    
T  37241857 tagctgatgactgatagctagtggcttatagttgaaaagctagcttattaaaattaaaagtgtttggtaaaattagctgttgaagtgactgataaatata 37241758  T
Q  189 aaatgacataaaaga 203  Q
    ||||||| |||||||    
T  37241757 aaatgacgtaaaaga 37241743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 114 - 214
Target Start/End: Complemental strand, 43569147 - 43569048
Alignment:
Q  114 cttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgttttt 213  Q
    ||||||| ||||||| ||||| |||||||||||||||||||||||| |||||| |||||||| |||| ||||||||||||||||||||  | ||||||||    
T  43569147 cttatagttgaaaagtttgctaattaaaaataatgtgtttggtaaagttagct-ttgaagtgactgataagtataaaatgacataaaatgaaatgttttt 43569049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 109 - 202
Target Start/End: Original strand, 42097411 - 42097505
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaa-ataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    |||||||||||||||||||| | ||||||||||| | ||||||||||||||||||||||||| |||||| ||| || ||||||||||| ||||||    
T  42097411 gatagcttatagctgaaaagttagcttattaaaataaaatgtgtttggtaaaattagctgttcaagtggttgataaatataaaatgacgtaaaag 42097505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 202
Target Start/End: Complemental strand, 6320290 - 6320197
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    |||||||||||||||||||| | | ||||||||| | | ||||||| ||||||||| ||||||||||||||| |||||||||||| ||||||||    
T  6320290 gatagcttatagctgaaaagatggtttattaaaatttaagtgtttgataaaattagttgttgaagtggctgataagtataaaatggcataaaag 6320197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 208
Target Start/End: Complemental strand, 11447919 - 11447789
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaag 173  Q
    ||||||||||||||||||||||| ||  ||||| |    || |||||||||||| | ||||||||||| |||  |||||||||||||||| |||||||||    
T  11447919 agctgatagctgaaaagctagcttatagctgatgg----ctgatagctgaaaagttagcttattaaaattaaaagtgtttggtaaaattaactgttgaag 11447824  T
Q  174 tggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||| ||| || |||||||||||||||||| |||||    
T  11447823 tggttgataaatataaaatgacataaaaggacatg 11447789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 109 - 209
Target Start/End: Complemental strand, 14453049 - 14452949
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||||||||| |||||||  | | ||||||||| | | ||||||||||||||||| ||||||||||||||| || |||||||||||||||||| |||||    
T  14453049 gatagcttatatctgaaaatatggtttattaaaattgaagtgtttggtaaaattagatgttgaagtggctgataaatataaaatgacataaaagtacatg 14452950  T
Q  209 t 209  Q
    |    
T  14452949 t 14452949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 93 - 211
Target Start/End: Original strand, 18109141 - 18109262
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtata 188  Q
    ||||||||| |||||||   ||||||||||||||||||| | ||| ||||||| |||  |||||||||||||||||||||||||||| || | || ||||    
T  18109141 tagctgatggctgatagctgatagcttatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttgaagtgact-ataaatata 18109239  T
Q  189 aaatgacataaaagaacatgttt 211  Q
    |||||||||||||| ||||||||    
T  18109240 aaatgacataaaaggacatgttt 18109262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 201
Target Start/End: Original strand, 33180778 - 33180872
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttg--gtaaaattagctgttgaagtggctgagaagtataaaatgacataaaa 201  Q
    |||||||||||||||||||| | | ||||||||| | | |||||||  |||||||||| ||||||||||||||| |||||||||| |||||||||    
T  33180778 gatagcttatagctgaaaagatggtttattaaaattgaagtgtttgtggtaaaattagttgttgaagtggctgataagtataaaacgacataaaa 33180872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 201
Target Start/End: Original strand, 7453960 - 7454052
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaa 201  Q
    |||||||||||||||||||| | ||| ||||||| |||  |||||||||||||||||||||||||||| || | || |||||||||||||||||    
T  7453960 gatagcttatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttgaagtgact-ataaatataaaatgacataaaa 7454052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 207
Target Start/End: Original strand, 239941 - 240075
Alignment:
Q  77 ctgatagctgaaaagctagctgatgactgat---agatagcttatagctg-aaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaa 172  Q
    |||||||||||||| |||||| ||  |||||    ||||||||||||||| ||||||| ||||||||||| ||||||||||| |||| |||   ||||||    
T  239941 ctgatagctgaaaaactagcttatagctgatggctgatagcttatagctgaaaaagctcgcttattaaaattaatgtgtttgataaagttactggttgaa 240040  T
Q  173 gtggctgagaagtataaaatgacataaaagaacat 207  Q
    || ||||  || |||||||||||||||||| ||||    
T  240041 gttgctggtaaatataaaatgacataaaagtacat 240075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 211
Target Start/End: Complemental strand, 1086703 - 1086582
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    |||||||||||||||||   || |||||||| ||||||| | ||||||||||   || ||||||||||||||||| |||||||||| |||| || ||| |    
T  1086703 tagctgatgactgatagtttatggcttatagttgaaaagttagcttattaaattaaaagtgtttggtaaaattagttgttgaagtgactgataaatatta 1086604  T
Q  190 aatgacataaaagaacatgttt 211  Q
    |||||| |||||| || |||||    
T  1086603 aatgacgtaaaaggacgtgttt 1086582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 75 - 180
Target Start/End: Complemental strand, 35422705 - 35422596
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaa-ataatgtgtttggtaaaattagctgttg 170  Q
    ||||||||||||||||||||| || |  ||||| |   ||||||||||||||||||| | ||||||||||| | ||  |||||||||||||||||||||     
T  35422705 agctgatagctgaaaagctagttggtagctgatggctgatagcttatagctgaaaagttagcttattaaaataaaaaatgtttggtaaaattagctgttc 35422606  T
Q  171 aagtggctga 180  Q
    ||||||||||    
T  35422605 aagtggctga 35422596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 6433038 - 6432948
Alignment:
Q  117 atagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    ||||||||||||||  |||||||||| |||  |||||||||||||||| ||||||| ||  ||| || |||||||||||||||||| ||||    
T  6433038 atagctgaaaagctaacttattaaaattaaaatgtttggtaaaattagttgttgaaatgattgataaatataaaatgacataaaagtacat 6432948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 208
Target Start/End: Original strand, 40861656 - 40861749
Alignment:
Q  115 ttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||| | ||| ||||||| |||  |||||||||||||||||||||||||||| || | || |||||||||||||||||| |||||    
T  40861656 ttatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttgaagtgact-ataaatataaaatgacataaaaggacatg 40861749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 110 - 208
Target Start/End: Original strand, 26339459 - 26339557
Alignment:
Q  110 atagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||||||||||||||||| | ||| ||||||| |||  |||||||||||||||||||||| ||||| || | || || ||||||||||||||| |||||    
T  26339459 atagcttatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttaaagtgact-ataaataaaaaatgacataaaaggacatg 26339557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 38245414 - 38245477
Alignment:
Q  148 gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgttt 211  Q
    ||||||||||||||||| ||||||||||| ||  || |||||||||||||||||| ||||||||    
T  38245414 gtgtttggtaaaattagttgttgaagtggttgttaaatataaaatgacataaaaggacatgttt 38245477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 201
Target Start/End: Complemental strand, 40789631 - 40789550
Alignment:
Q  121 ctgaaaagcttgcttattaaaaat-aatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaa 201  Q
    ||||||||||  || ||||||||| || ||||||||||||||||||||||||| || |||| || |||||||| ||||||||    
T  40789631 ctgaaaagctaactaattaaaaattaaagtgtttggtaaaattagctgttgaaatgactgataaatataaaataacataaaa 40789550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 201
Target Start/End: Complemental strand, 39532708 - 39532616
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaa 201  Q
    |||||||||||||||||||| | | | ||||||| |||  ||||||||||||||||| |||||||||| || | || ||||||||| |||||||    
T  39532708 gatagcttatagctgaaaagttagttgattaaaattaaaagtgtttggtaaaattagttgttgaagtgact-ataaatataaaatggcataaaa 39532616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 10245721 - 10245818
Alignment:
Q  110 atagcttatagctgaaaagcttgcttattaaaaataatg-tgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    ||||||||| |||||||| || ||| ||||||| |||   |||||| ||||||||||||||||| || || | || |||||||||||||||||| ||||    
T  10245721 atagcttattgctgaaaaactagctgattaaaattaaaaatgtttgataaaattagctgttgaaatgact-ataaatataaaatgacataaaaggacat 10245818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 28021182 - 28021101
Alignment:
Q  118 tagctgaaaagcttgcttattaaaaataatg--tgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacat 197  Q
    |||||||||| |||| |||||||||| ||    ||||||||||||||| ||||||||||||  || || |||||||||||||    
T  28021182 tagctgaaaaacttgattattaaaaaaaaaaattgtttggtaaaattaactgttgaagtggtagataaatataaaatgacat 28021101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 201
Target Start/End: Complemental strand, 3148075 - 3147986
Alignment:
Q  112 agcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaa 201  Q
    ||||||| ||||||||||| | | ||| ||| ||| ||||||||||||||||||  || || || |||| || |||||||||||| ||||    
T  3148075 agcttatggctgaaaagctagttgattgaaattaaagtgtttggtaaaattagcgtttaaaatgactgataaatataaaatgacagaaaa 3147986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 7182770 - 7182829
Alignment:
Q  148 gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||| ||||||||||| |||||||||| || | || |||||||||||||||||| |||||    
T  7182770 gtgttcggtaaaattagttgttgaagtgact-ataaatataaaatgacataaaaggacatg 7182829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 172
Target Start/End: Original strand, 8340595 - 8340659
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaa 172  Q
    ||||| ||||| |||||||| | ||||||||||| |||  |||||||||||||||| ||||||||    
T  8340595 gatagtttataactgaaaagttagcttattaaaattaaaagtgtttggtaaaattaactgttgaa 8340659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 202
Target Start/End: Complemental strand, 30219173 - 30219081
Alignment:
Q  110 atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    |||||||||||||||||| ||   | ||||||| |||  |||||  |||||||| || |||||||| |||| || ||||||||||| ||||||    
T  30219173 atagcttatagctgaaaaactaattgattaaaattaaaatgtttcataaaattaacttttgaagtgactgataaatataaaatgacctaaaag 30219081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 32481734 - 32481793
Alignment:
Q  148 gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||||||||||||||| ||||||||| | | | || |||||||||||||||||| |||||    
T  32481734 gtgtttggtaaaattagttgttgaagt-gattataaatataaaatgacataaaaggacatg 32481793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 2e-54; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 75 - 217
Target Start/End: Original strand, 29993341 - 29993486
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttga 171  Q
    ||||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  29993341 agctgatagttgaaaagctagctgatgactgatagctgatagcttatagctgaaaagcttgcttattaaaaataatgtctttggtaaaattagctgttga 29993440  T
Q  172 agtggctgagaagtataaaatgacataaaagaacatgttttttaat 217  Q
    ||||||||| ||||||||||| ||||||||| |||| |||||||||    
T  29993441 agtggctgataagtataaaataacataaaaggacattttttttaat 29993486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 93 - 214
Target Start/End: Original strand, 48312823 - 48312947
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  48312823 tagctgatgactgatagctaatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataa 48312922  T
Q  190 aatgacataaaagaacatgtttttt 214  Q
    |||||||||||||||||||||||||    
T  48312923 aatgacataaaagaacatgtttttt 48312947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 46536900 - 46536773
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||    
T  46536900 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtgactgataagtataaaatgacataaaaggacatg 46536801  T
Q  209 tt--ttttaatatacatatagacacaca 234  Q
    ||  ||||||||||||||||||||||||    
T  46536800 ttttttttaatatacatatagacacaca 46536773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 75 - 234
Target Start/End: Complemental strand, 27827564 - 27827407
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagt 174  Q
    ||||||||||||||||||||||||||  ||| |||    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  27827564 agctgatagctgaaaagctagctgatagctggtag----cttatagctgaaaagtttgcttattaaaaataatgtgtttggtaaaattagctgttgaagt 27827469  T
Q  175 ggctgagaagtataaaatgacataaaagaacatg--ttttttaatatacatatagacacaca 234  Q
    |||||| ||||||||||||||||||||| || ||  ||||||||||||||||||||| ||||    
T  27827468 ggctgataagtataaaatgacataaaaggacctgttttttttaatatacatatagacgcaca 27827407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 28493553 - 28493682
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||    
T  28493553 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgacataaaaggacgtg 28493652  T
Q  209 ----ttttttaatatacatatagacacaca 234  Q
        ||||||||||||||||||||||||||    
T  28493653 ttttttttttaatatacatatagacacaca 28493682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 46614956 - 46615079
Alignment:
Q  112 agcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaaca-tgtt 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||| | ||    
T  46614956 agcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgacataaaatgacattttt 46615055  T
Q  211 ttttaatatacatatagacacaca 234  Q
    ||||||||||||||||||||||||    
T  46615056 ttttaatatacatatagacacaca 46615079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 75 - 214
Target Start/End: Original strand, 42264551 - 42264686
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagt 174  Q
    ||||||||||||||||| ||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42264551 agctgatagctgaaaagttagctgatgactgata----gcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctattgaagt 42264646  T
Q  175 ggctgagaagtataaaatgacataaaagaacatgtttttt 214  Q
     | ||| ||||||||||||||||||||| |||||||||||    
T  42264647 agatgataagtataaaatgacataaaaggacatgtttttt 42264686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 93 - 214
Target Start/End: Complemental strand, 43338457 - 43338333
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  43338457 tagctgatgactgatagctgatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataa 43338358  T
Q  190 aatgacataaaagaacatgtttttt 214  Q
    ||||||||||||| |||||||||||    
T  43338357 aatgacataaaaggacatgtttttt 43338333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 75 - 234
Target Start/End: Complemental strand, 46673462 - 46673296
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttga 171  Q
    ||||| |||||||||||||||||||||||||||||   |||| |||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  46673462 agctgttagctgaaaagctagctgatgactgatagttgatagattatagttgaaaagcttgcttattaaaaataatgtgtttggtaaaattagtttttga 46673363  T
Q  172 agtggctgagaagtataaaatgacataaaagaacatgtt----ttttaatatacatatagacacaca 234  Q
    ||||||||| ||||||||||||  ||||||| |||||||    |||||||||||||||| |||||||    
T  46673362 agtggctgataagtataaaatgctataaaaggacatgttttttttttaatatacatatacacacaca 46673296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 42327435 - 42327567
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||    
T  42327435 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggttgataagtataaaatgacataaaaggacatg 42327534  T
Q  209 -------ttttttaatatacatatagacacaca 234  Q
           ||||||||||||||||||||||||||    
T  42327535 tttttttttttttaatatacatatagacacaca 42327567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 90 - 234
Target Start/End: Original strand, 46350109 - 46350252
Alignment:
Q  90 agctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataa 189  Q
    |||||||||||||||||||    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  46350109 agctagctgatgactgata----gcttatagctgaaaagcctgcttattaaaaataatgtgtttgataaaattagctgttgaagtggctgataagtataa 46350204  T
Q  190 aatgacataaaagaacatg----ttttttaatatacatatagacacaca 234  Q
    ||||||||||||| |||||    ||||||||||||||||||||||||||    
T  46350205 aatgacataaaag-acatgctttttttttaatatacatatagacacaca 46350252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 97 - 234
Target Start/End: Complemental strand, 6244666 - 6244523
Alignment:
Q  97 tgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatg 193  Q
    |||||||||||||   ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  6244666 tgatgactgatagctgatatcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtagctgataagtataaaatg 6244567  T
Q  194 acataaaagaacatgtt---ttttaatatacatatagacacaca 234  Q
    ||||||||| |||||||   ||||||||||  ||||||||||||    
T  6244566 acataaaaggacatgtttttttttaatatatttatagacacaca 6244523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 4061404 - 4061307
Alignment:
Q  117 atagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgtttttt 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  4061404 atagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgataagtataaaatgacataaaaggacatgtttttt 4061307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 111 - 234
Target Start/End: Original strand, 31031282 - 31031406
Alignment:
Q  111 tagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaa-gaacatgt 209  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||| ||   | |    
T  31031282 tagctgatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagttgttgaagtggctgataaatataaaatgacataaaaggatttttt 31031381  T
Q  210 tttttaatatacatatagacacaca 234  Q
    |||||||||||||||||||||||||    
T  31031382 tttttaatatacatatagacacaca 31031406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 75 - 234
Target Start/End: Original strand, 42328314 - 42328475
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagt 174  Q
    ||||||||||||||||||||||| ||  ||||| |    || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  42328314 agctgatagctgaaaagctagcttatagctgatgg----ctgatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagttgttgaagt 42328409  T
Q  175 ggctgagaagtataaaatgacataaaagaacatg------ttttttaatatacatatagacacaca 234  Q
    |||| | || |||| ||||||||||||| |||||      ||||||||||||||||||||||||||    
T  42328410 ggctaataaatatataatgacataaaaggacatgttttttttttttaatatacatatagacacaca 42328475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 78 - 234
Target Start/End: Complemental strand, 43158088 - 43157940
Alignment:
Q  78 tgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggc 177  Q
    |||||||||||||||||| ||||  ||||||     ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  43158088 tgatagctgaaaagctagttgatagctgataa----cttatagctaaaaagcttgcttattaaaaataatgtgtttggtaaaattagttgttgaagtgac 43157993  T
Q  178 tgagaagtataaaatgacataaaagaacatgttttttaatatacatatagacacaca 234  Q
    ||| |||||||||||||||||       || ||||||||||||||||||||||||||    
T  43157992 tgataagtataaaatgacata----tttattttttttaatatacatatagacacaca 43157940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 117 - 209
Target Start/End: Complemental strand, 46330431 - 46330339
Alignment:
Q  117 atagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgt 209  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||| ||||||    
T  46330431 atagctgaaaagcttgcttattaaaattaatgtgtttggtaaaattaactgttaaagtggctgataagtataaaatgacataaaagtacatgt 46330339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 31226213 - 31226329
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||| |||||         |     
T  31226213 gatagcttatagctgaaaagtttgcttattaaaaataatgtgtttggtaaaattagttgttgaagtgactgataagtataaaaggacat---------tt 31226303  T
Q  209 ttttttaatatacatatagacacaca 234  Q
    ||||||||||||||||||||||||||    
T  31226304 ttttttaatatacatatagacacaca 31226329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 109 - 197
Target Start/End: Original strand, 28957439 - 28957527
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacat 197  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||    
T  28957439 gatagtttatagctgaaaaacttgcttattaaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataaaaggacat 28957527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 75 - 175
Target Start/End: Complemental strand, 35648228 - 35648125
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgata---gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttga 171  Q
    ||||||||| ||||||||||||||||  |||||    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  35648228 agctgatagttgaaaagctagctgatagctgatgactgatagcttatagctgaaaaacttgcttattaaaaataatgtgtttggtaaaattagctgttaa 35648129  T
Q  172 agtg 175  Q
    ||||    
T  35648128 agtg 35648125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 211
Target Start/End: Original strand, 42326997 - 42327135
Alignment:
Q  76 gctgatagctgaaaagctagctgatgactgata---gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaa 172  Q
    ||||||| |||||||||||||| ||  |||||    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  42326997 gctgataactgaaaagctagcttatagctgatgactgatagcttatagctgaaaagcttgcttattaaaaataatgtgtttgataaaattaactgttgaa 42327096  T
Q  173 gtggctgagaagtataaaatgacataaaagaacatgttt 211  Q
     || |||| |  |||||||||||| ||||  ||||||||    
T  42327097 atgactgatacatataaaatgacaaaaaaagacatgttt 42327135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 109 - 210
Target Start/End: Original strand, 43544215 - 43544316
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||| |||||||||||||| | | ||||||||| | | ||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||    
T  43544215 gatagtttatagctgaaaagatggtttattaaaattgaagtgttaggtaaaattagttgttgaagtggctgataagtataaaatgacataaaaggacatg 43544314  T
Q  209 tt 210  Q
    ||    
T  43544315 tt 43544316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 109 - 169
Target Start/End: Complemental strand, 43002642 - 43002582
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgtt 169  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  43002642 gatagcttatagctgaaaagcttgcttattaaaaatagtgtgtttggtaaaattagctgtt 43002582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 39869428 - 39869564
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgat---agatagcttatagctgaaaagcttgcttattaaaaat-aatgtgtttggtaaaattagctgttg 170  Q
    ||||||||||||||||||||||| ||  |||||    |||||||||||||||||||| | ||| ||||||| | || |||||||||||||||||||||||    
T  39869428 agctgatagctgaaaagctagcttatagctgatggctgatagcttatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttg 39869527  T
Q  171 aagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||| || | || |||||||||||||||||| |||||    
T  39869528 aagtgact-ataaatataaaatgacataaaaggacatg 39869564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 207
Target Start/End: Original strand, 21920187 - 21920322
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttga 171  Q
    ||||||||||||||||||||||| ||  ||| | |   |||||| |||||||||||| |  |||||||||| ||| |||||||||||||||||||| |||    
T  21920187 agctgatagctgaaaagctagcttatagctggtggctgatagctgatagctgaaaagttaacttattaaaattaaagtgtttggtaaaattagctgctga 21920286  T
Q  172 agtggctgagaagtataaaatgacataaaagaacat 207  Q
    | || |||| || |||||||||||||||||| ||||    
T  21920287 aatgactgataaatataaaatgacataaaagtacat 21920322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 202
Target Start/End: Complemental strand, 33980545 - 33980452
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    |||||||||||||||||||| | | || |||||| | | ||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  33980545 gatagcttatagctgaaaagatggtttgttaaaattgaagtgtttggtaaaattagttgttgaagtggctgataagtatcaaatgacataaaag 33980452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 211
Target Start/End: Original strand, 34821402 - 34821501
Alignment:
Q  111 tagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgtt 210  Q
    |||||||||| |||||||||  ||| |||||||||||||||||||||||||||| ||||||||   |||| |  ||||||||||||||||||||||||||    
T  34821402 tagcttatag-tgaaaagctcactttttaaaaataatgtgtttggtaaaattagttgttgaagcaactgatacatataaaatgacataaaagaacatgtt 34821500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 46733283 - 46733158
Alignment:
Q  89 aagctagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaag 184  Q
    ||||||||||||| |||||||   ||||||||||| ||||||| | ||| ||||||| |||  |||||||||||||||||||||||||||| || | ||     
T  46733283 aagctagctgatggctgatagcttatagcttatagttgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttgaagtgact-ataaa 46733185  T
Q  185 tataaaatgacataaaagaacatgttt 211  Q
    |||||||||||||||||| ||||||||    
T  46733184 tataaaatgacataaaaggacatgttt 46733158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 3371119 - 3371006
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaa-ataatgtgtttggtaaaattagctgttgaagtggctgagaagtata 188  Q
    ||||||||||||||| |   ||||||||||||||||||| | ||||||||||| | || ||||||||||||||||| |||| |||||||||| || ||||    
T  3371119 tagctgatgactgatggctgatagcttatagctgaaaagttagcttattaaaataaaaagtgtttggtaaaattagttgttcaagtggctgataaatata 3371020  T
Q  189 aaatgacataaaag 202  Q
    ||||||| ||||||    
T  3371019 aaatgacgtaaaag 3371006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 201
Target Start/End: Complemental strand, 47253610 - 47253519
Alignment:
Q  110 atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaa 201  Q
    ||||||||||||||||||| | | ||||||||| | | |||||| |||||||||| ||||||||||||||| |||||||| |||||||||||    
T  47253610 atagcttatagctgaaaagatggtttattaaaattgaagtgtttagtaaaattagttgttgaagtggctgataagtataagatgacataaaa 47253519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 109 - 202
Target Start/End: Original strand, 33981596 - 33981689
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    |||||||||||| ||||||| | | ||||||||| | |  |||||| ||||||||||||||||||||||||| || ||||||||||||||||||    
T  33981596 gatagcttatagttgaaaagatagtttattaaaattgaaatgtttgataaaattagctgttgaagtggctgataaatataaaatgacataaaag 33981689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 37657533 - 37657662
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaag 173  Q
    ||||||||||||||||||||||| ||  ||||| |    ||||||||||||||| | ||| ||||||| |||  ||||||||||||||||||||||||||    
T  37657533 agctgatagctgaaaagctagcttatagctgatgg----cttatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttgaag 37657628  T
Q  174 tggctgagaagtataaaatgacataaaagaacatg 208  Q
    || || | || |||||||||||||||||| |||||    
T  37657629 tgact-ataaatataaaatgacataaaaggacatg 37657662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 93 - 208
Target Start/End: Complemental strand, 40061822 - 40061704
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtata 188  Q
    ||||||||| |||||||   ||||||||||||||||||| | ||| ||||||| |||  |||||||||||||||||||||||||||| || | || ||||    
T  40061822 tagctgatggctgatagctgatagcttatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttgaagtgact-ataaatata 40061724  T
Q  189 aaatgacataaaagaacatg 208  Q
    |||||||||||||| |||||    
T  40061723 aaatgacataaaaggacatg 40061704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 42831956 - 42831835
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||||||||||||||| || |   ||||||||| | | ||||||||||||||||| |||||||||| |||| |||||||||| |||||||||  |||||    
T  42831956 gatagcttatagctgaacagatgatttattaaaattgaagtgtttggtaaaattagttgttgaagtgactgataagtataaaaagacataaaatgacatg 42831857  T
Q  209 ttttttaatatacatatagaca 230  Q
    ||| |  ||||| |||||||||    
T  42831856 tttgtatatatatatatagaca 42831835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 197
Target Start/End: Original strand, 595477 - 595565
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacat 197  Q
    |||||||||||||||||||| |   ||||||||| | | ||||||||||||||||| |||||||||| |||| ||||||||||||||||    
T  595477 gatagcttatagctgaaaagatgatttattaaaattgaagtgtttggtaaaattagttgttgaagtgtctgataagtataaaatgacat 595565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 208
Target Start/End: Original strand, 9806043 - 9806142
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    |||||||||||||||||||| | ||| ||||||| |||  |||||||||||||||||||||||||||| || | || |||||||||||||||||| ||||    
T  9806043 gatagcttatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttgaagtgact-ataaatataaaatgacataaaaggacat 9806141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 42832981 - 42833080
Alignment:
Q  108 agatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    ||||||||||||||| ||||    | ||||||||| | | ||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| ||||    
T  42832981 agatagcttatagctaaaaacaaggtttattaaaattgaagtgtttggtaaaattagttgttgaagtggctgataagtataaaatgaaataaaaggacat 42833080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 202
Target Start/End: Complemental strand, 44819384 - 44819260
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaa-ataatgtgtttggtaaaattagctgttgaag 173  Q
    |||||||||||||||||||| || ||  ||    ||||||||| |||||||||| | ||||||||||| | || |||||||||||||||||||||||||     
T  44819384 agctgatagctgaaaagctaacttatagct----gatagcttacagctgaaaagttagcttattaaaataaaaagtgtttggtaaaattagctgttgaaa 44819289  T
Q  174 tggctgagaagtataaaatgacataaaag 202  Q
    | ||||| || ||||||||||| ||||||    
T  44819288 tagctgataaatataaaatgacgtaaaag 44819260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 585203 - 585305
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||| ||||||| ||||||| |   ||||||||| | | ||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||  |||||    
T  585203 gataacttataggtgaaaagatgatttattaaaattgaagtgttaggtaaaattagttgttgaagtggctgataagtataaaatgacataaaaagacatg 585302  T
Q  209 ttt 211  Q
    |||    
T  585303 ttt 585305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 201
Target Start/End: Original strand, 42980369 - 42980480
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaa-aaataatgtgtttggtaaaattagctgttgaagtggctgagaagtata 188  Q
    |||||||||||||||||   ||||||||||||||||||| | ||||||||| | | || ||||||||||||||||| ||||||||| ||||| || ||||    
T  42980369 tagctgatgactgatagttgatagcttatagctgaaaagttagcttattaacataaaaagtgtttggtaaaattagttgttgaagt-gctgataaatata 42980467  T
Q  189 aaatgacataaaa 201  Q
    ||||||| |||||    
T  42980468 aaatgacgtaaaa 42980480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 217
Target Start/End: Complemental strand, 46536086 - 46535958
Alignment:
Q  93 tagctgatgactgatagat---agcttatagctgaaaa-gcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtata 188  Q
    ||||||||||||||||| |   |||||||||||||||| ||| ||||||||||| ||| ||||| || ||| |||| ||| ||||| ||||| || ||||    
T  46536086 tagctgatgactgatagctggtagcttatagctgaaaaagctagcttattaaaattaaagtgttaggaaaagttagttgtcgaagtagctgataaatata 46535987  T
Q  189 aaatgacataaaagaacatgttttttaat 217  Q
    |||||||||||||| |||| ||| |||||    
T  46535986 aaatgacataaaaggacatatttgttaat 46535958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 201
Target Start/End: Complemental strand, 30583315 - 30583223
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaa 201  Q
    |||||||||||||||||||| | ||| ||||||| |||  |||||||||||||||||||||||||||| || | || |||||||||||||||||    
T  30583315 gatagcttatagctgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttgaagtgact-ataaatataaaatgacataaaa 30583223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 208
Target Start/End: Complemental strand, 31620174 - 31620056
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtata 188  Q
    ||||||||| |||||||   ||||||||||||||||||| | ||| ||||||| |||  ||||| |||||||||||||||||||||| || | || ||||    
T  31620174 tagctgatggctgatagttgatagcttatagctgaaaagttagctgattaaaattaaaagtgttgggtaaaattagctgttgaagtgact-ataaatata 31620076  T
Q  189 aaatgacataaaagaacatg 208  Q
    |||||||||||||| |||||    
T  31620075 aaatgacataaaaggacatg 31620056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 208
Target Start/End: Original strand, 35669797 - 35669915
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtata 188  Q
    ||||||||| |||||||   ||||||||||| ||||||| | ||| ||||||| |||  |||||||||||||||||||||||||||| || | || ||||    
T  35669797 tagctgatggctgatagttgatagcttatagttgaaaagttagctgattaaaattaaaagtgtttggtaaaattagctgttgaagtgact-ataaatata 35669895  T
Q  189 aaatgacataaaagaacatg 208  Q
    |||||||||||||| |||||    
T  35669896 aaatgacataaaaggacatg 35669915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 36122119 - 36122054
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagt 174  Q
    ||||||||||||||||||| || | ||||||||| ||| |||||||||||||||||||||||||||    
T  36122119 gatagcttatagctgaaaaactagtttattaaaattaaagtgtttggtaaaattagctgttgaagt 36122054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 76 - 162
Target Start/End: Complemental strand, 46535388 - 46535306
Alignment:
Q  76 gctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaatt 162  Q
    |||||||||||||||||||||||||  ||    ||||||||||||| |||||||| ||| |||||||||||||||||| ||||||||    
T  46535388 gctgatagctgaaaagctagctgattgct----gatagcttatagccgaaaagctcgctaattaaaaataatgtgtttagtaaaatt 46535306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 206
Target Start/End: Complemental strand, 46899348 - 46899213
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaa-ataatgtgtttggtaaaattagctgttg 170  Q
    ||||||||||||||||||||| || |  ||||| |   ||||||||||||||||||  | ||||||||||| | || ||||||||||||||||  ||||     
T  46899348 agctgatagctgaaaagctagttggtagctgatggctgatagcttatagctgaaaaattagcttattaaaataaaaagtgtttggtaaaattaaatgttc 46899249  T
Q  171 aagtggctgagaagtataaaatgacataaaagaaca 206  Q
    ||||| |||| || ||||||||||| ||||||||||    
T  46899248 aagtgactgataaatataaaatgacgtaaaagaaca 46899213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 109 - 169
Target Start/End: Complemental strand, 982318 - 982258
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgtt 169  Q
    ||||||||||||||||||| || ||||| ||||||||||||||||||||||||||| ||||    
T  982318 gatagcttatagctgaaaaactcgcttaataaaaataatgtgtttggtaaaattagatgtt 982258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 3116381 - 3116449
Alignment:
Q  149 tgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatgttttttaat 217  Q
    |||||||||||||||| ||||||||||||| | || |||| |||||||||||||||||||||| |||||    
T  3116381 tgtttggtaaaattagttgttgaagtggctaaaaaatatagaatgacataaaagaacatgtttgttaat 3116449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 110 - 202
Target Start/End: Complemental strand, 38226195 - 38226103
Alignment:
Q  110 atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    ||||||||||||  ||||| | | ||||||||| | |  |||||||||||||||| ||||||| ||||||| |||||||||||||||||||||    
T  38226195 atagcttatagccaaaaagatggtttattaaaattgaattgtttggtaaaattagttgttgaaatggctgataagtataaaatgacataaaag 38226103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 41407744 - 41407656
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacat 197  Q
    ||||||||||| |||||||| | | ||||||||| | | |||||||||||||||  |||||||||||||||| | ||||||||||||||    
T  41407744 gatagcttataactgaaaagatggtttattaaaattgaagtgtttggtaaaattgactgttgaagtggctgataggtataaaatgacat 41407656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 109 - 208
Target Start/End: Original strand, 41833126 - 41833225
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    ||||| |||||||||||||  | ||| ||||||| |||  |||||||||||||||||||||||||||| || | || |||||||||||||||||||||||    
T  41833126 gatagtttatagctgaaaaattagctgattaaaattaaaagtgtttggtaaaattagctgttgaagtgact-acaaatataaaatgacataaaagaacat 41833224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 75 - 211
Target Start/End: Original strand, 44103976 - 44104109
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaag 173  Q
    ||||||||||||||||||||||| ||  ||||||| | |    ||||||||||| |  || ||||||| |||  |||||||||||||||||||  |||||    
T  44103976 agctgatagctgaaaagctagcttatagctgatagctgg----tagctgaaaagttaactaattaaaattaaaagtgtttggtaaaattagcttctgaag 44104071  T
Q  174 tggctgagaagtataaaatgacataaaagaacatgttt 211  Q
    || |||| || |||||||||||||||||| ||||||||    
T  44104072 tgactgataaatataaaatgacataaaaggacatgttt 44104109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 208
Target Start/End: Original strand, 43467460 - 43467557
Alignment:
Q  111 tagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||| | ||| ||||||| |||  |||||| |||||||||| ||||||||||||| | || |||||||||||||||||| |||||    
T  43467460 tagcttatagctgaaaagttagctgattaaaattaaaagtgtttcgtaaaattagttgttgaagtggct-ataaatataaaatgacataaaaggacatg 43467557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 109 - 210
Target Start/End: Original strand, 1600645 - 1600745
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||| |||||||||||||| | | ||||||||| | | ||||| ||||||||||| | ||||||||||||| |||||| |||||||||||||  |||||    
T  1600645 gatagtttatagctgaaaagatggtttattaaaattgaagtgttaggtaaaattagatattgaagtggctgataagtat-aaatgacataaaatgacatg 1600743  T
Q  209 tt 210  Q
    ||    
T  1600744 tt 1600745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 117 - 201
Target Start/End: Complemental strand, 6477553 - 6477468
Alignment:
Q  117 atagctgaaaagcttgcttattaaaa-ataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaa 201  Q
    |||||||||||| | ||||||||||| | || ||||||||||||||||| |||| |||||||||| || ||||||||||| |||||    
T  6477553 atagctgaaaagttagcttattaaaataaaaagtgtttggtaaaattagatgttcaagtggctgataaatataaaatgacgtaaaa 6477468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 165
Target Start/End: Original strand, 43154408 - 43154483
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagc 165  Q
    ||||||||||| |||||   ||| ||||||| ||||||||| ||||||||||||||||||||||||||||| ||||    
T  43154408 tagctgatgacggatagctgataacttatagttgaaaagctcgcttattaaaaataatgtgtttggtaaaactagc 43154483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 109 - 201
Target Start/End: Complemental strand, 44571538 - 44571445
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaa-ataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaa 201  Q
    |||||||||||||| ||||  |  |||||||||| | || ||||||||||||||||||||||||||| ||||| || ||||||||||| |||||    
T  44571538 gatagcttatagctaaaaaattaacttattaaaataaaaagtgtttggtaaaattagctgttgaagtagctgataaatataaaatgacgtaaaa 44571445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 47252842 - 47252749
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||| ||||||| | | ||||||||||||||||||| |||||||||         ||| ||||| ||||||||||||||||||||| |||||    
T  47252842 gatagcttatagttgaaaagttcgtttattaaaaataatgtgttcggtaaaatt---------agttgctgataagtataaaatgacataaaaggacatg 47252752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 208
Target Start/End: Original strand, 23357428 - 23357550
Alignment:
Q  89 aagctagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatg-tgtttggtaaaattagctgttgaagtggctgagaag 184  Q
    ||||||||||||| |||||||   ||| ||||||||||||||| | ||| ||||||| |||   ||||||||||||||| ||||| ||||| || | ||     
T  23357428 aagctagctgatggctgatagctgataacttatagctgaaaagttagctgattaaaattaaaaatgtttggtaaaattaactgttaaagtgact-ataaa 23357526  T
Q  185 tataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||| |||||    
T  23357527 tataaaatgacataaaaggacatg 23357550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 31968967 - 31969027
Alignment:
Q  147 tgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||| |||||||||| || | || ||||||||||||||||||||||||    
T  31968967 tgtgtttggtaaaattagttgttgaagtgact-ataaatataaaatgacataaaagaacatg 31969027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 208
Target Start/End: Complemental strand, 34307790 - 34307672
Alignment:
Q  93 tagctgatgactgatagatag---cttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtata 188  Q
    ||||||||||| ||||||| |   ||||||||||||||| | |||| |||||| |||  ||||||||||||||||| ||||||| || || | || ||||    
T  34307790 tagctgatgaccgatagatggtatcttatagctgaaaagttagcttgttaaaattaaaagtgtttggtaaaattagttgttgaaatgact-ataaatata 34307692  T
Q  189 aaatgacataaaagaacatg 208  Q
    |||||||||||||| |||||    
T  34307691 aaatgacataaaaggacatg 34307672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 36821392 - 36821327
Alignment:
Q  132 gcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacat 197  Q
    |||||||||||||||||| ||| |||||||||| |||||||||| |||| |  |||||||||||||    
T  36821392 gcttattaaaaataatgtatttagtaaaattagttgttgaagtgactgatacatataaaatgacat 36821327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 21261964 - 21261908
Alignment:
Q  151 tttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    |||||||||||||| ||||||||| ||||| || ||||||||||| |||||||||||    
T  21261964 tttggtaaaattagttgttgaagtagctgataaatataaaatgacgtaaaagaacat 21261908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 197
Target Start/End: Complemental strand, 42698255 - 42698168
Alignment:
Q  111 tagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacat 197  Q
    |||||||||||||||||| |   ||||||||| |||  |||||||||||||||| ||| |||||||||||| || |||||||| ||||    
T  42698255 tagcttatagctgaaaagttaatttattaaaattaaaagtgtttggtaaaattaactgctgaagtggctgataaatataaaataacat 42698168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 11374956 - 11375010
Alignment:
Q  1 caacttgaagattgtatttcaactgagacctaaatattggcctgagaagtggaag 55  Q
    ||||||||||||||| |||||| ||| || ||||||||||||| |||||||||||    
T  11374956 caacttgaagattgtgtttcaagtgacacataaatattggcctaagaagtggaag 11375010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 46347391 - 46347445
Alignment:
Q  148 gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaag 202  Q
    ||||||||||||||||| |||| |||||||||| || ||||||||||| ||||||    
T  46347391 gtgtttggtaaaattagttgttcaagtggctgataaatataaaatgacgtaaaag 46347445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 197
Target Start/End: Original strand, 31029899 - 31029986
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacat 197  Q
    ||||| |||||||||||||| | ||| ||||||   || ||||||| |||||||||||||||||||| || | || |||||||||||||    
T  31029899 gatagtttatagctgaaaagttagctgattaaattaaaagtgtttgataaaattagctgttgaagtgact-ataaatataaaatgacat 31029986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 208
Target Start/End: Original strand, 35669070 - 35669169
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaa-ataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacat 207  Q
    |||||||||||||||||||  |  |||||||||| | || ||||||||||| ||||| ||||||||  ||||| || ||||||||||| ||||||| |||    
T  35669070 gatagcttatagctgaaaaattaacttattaaaataaaacgtgtttggtaatattagttgttgaag-agctgataaatataaaatgacgtaaaagagcat 35669168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 42329146 - 42329205
Alignment:
Q  148 gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||||||||||||||||||||||||| | | | || |||||||||||||||||| |||||    
T  42329146 gtgtttggtaaaattagctgttgaagt-gattataaatataaaatgacataaaaggacatg 42329205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 46159620 - 46159520
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||| ||||||||||||||| | | ||||||||| | | ||||||| ||||||||| ||||||| |  |||| |||||||||  |||||||||  |||||    
T  46159620 gataacttatagctgaaaagatggtttattaaaattgaagtgtttgataaaattagatgttgaaataactgataagtataaa--gacataaaatgacatg 46159523  T
Q  209 ttt 211  Q
    |||    
T  46159522 ttt 46159520  T

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Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 42262971 - 42262925
Alignment:
Q  117 atagctgaaaagcttgcttattaaaaataatgtgtttggtaaaatta 163  Q
    |||| ||||||||| |||||||||||||||||||| || ||||||||    
T  42262971 atagttgaaaagctagcttattaaaaataatgtgtatgttaaaatta 42262925  T

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Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 42831299 - 42831243
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgat---agatagcttatagctgaaaag 128  Q
    ||||||||||||||||||||||||||  |||||   |||| ||||||||||||||||    
T  42831299 agctgatagctgaaaagctagctgatagctgatagcagatggcttatagctgaaaag 42831243  T

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Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 31435694 - 31435823
Alignment:
Q  75 agctgatagctgaaaagctagctgatgactgatagatagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaag 173  Q
    ||||||||||||||||||||||| ||   |||| |    ||||||||||||||| | | | ||||||| |||  || | |||||||||||| ||||||||    
T  31435694 agctgatagctgaaaagctagcttatagttgatgg----cttatagctgaaaagttagttgattaaaattaaaagtatatggtaaaattagatgttgaag 31435789  T
Q  174 tggctgagaagtataaaatgacataaaagaacatg 208  Q
    || || | || |||||||||||||||||| |||||    
T  31435790 tgact-ataaatataaaatgacataaaaggacatg 31435823  T

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Target: scaffold0464 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 5443 - 5315
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||| |||||    
T  5443 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctcttgaagtgcctgataagtataaaatgacataaaaggacatg 5344  T
Q  209 tt---ttttaatatacatatagacacaca 234  Q
    ||   ||||||||||||||||||||||||    
T  5343 tttttttttaatatacatatagacacaca 5315  T

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Target: scaffold0330 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 7796 - 7669
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||| |||||    
T  7796 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagttgttgaagtagctgataagtataaaatgacataaaaggacatg 7697  T
Q  209 tt--ttttaatatacatatagacacaca 234  Q
    ||  |||||||||||||||| |||||||    
T  7696 tttcttttaatatacatatatacacaca 7669  T

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Target: scaffold0325 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 109 - 212
Target Start/End: Complemental strand, 19150 - 19047
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||    
T  19150 gatagcttaaagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagttgttgaagtggctgataagtataaaatgacataaaaggacatg 19051  T
Q  209 tttt 212  Q
    ||||    
T  19050 tttt 19047  T

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Target: scaffold0014 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 70832 - 70934
Alignment:
Q  109 gatagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||| ||||||||||||||| | | ||||||||| | | |||||| |||||||||| |||| |||||||||| ||||||||||||||||||||||||| |    
T  70832 gataacttatagctgaaaagttggtttattaaaattgaagtgttttgtaaaattagttgttcaagtggctgataagtataaaatgacataaaagaacaag 70931  T
Q  209 ttt 211  Q
    |||    
T  70932 ttt 70934  T

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Target: scaffold0115 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 208
Target Start/End: Complemental strand, 14347 - 14250
Alignment:
Q  111 tagcttatagctgaaaagcttgcttattaaaaataat-gtgtttggtaaaattagctgttgaagtggctgagaagtataaaatgacataaaagaacatg 208  Q
    |||||||||||||||||| | ||| ||||||| |||  |||||||||||||||||||||||||||| || | || |||||||||||||||||| |||||    
T  14347 tagcttatagctgaaaagttagctaattaaaattaaaagtgtttggtaaaattagctgttgaagtgact-ataaatataaaatgacataaaaggacatg 14250  T

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Target: scaffold0039 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 174
Target Start/End: Complemental strand, 76960 - 76876
Alignment:
Q  93 tagctgatgactgatag---atagcttatagctgaaaagcttgcttattaaaaataatgtgtttggtaaaattagctgttgaagt 174  Q
    |||||||||||||||||   |||||||||||||||||| |||||| ||| ||| ||| ||||| |||||||||| || |||||||    
T  76960 tagctgatgactgatagctgatagcttatagctgaaaaacttgctgatttaaattaaagtgttgggtaaaattaacttttgaagt 76876  T

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Target: scaffold0076 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 137
Target Start/End: Original strand, 14121 - 14184
Alignment:
Q  77 ctgatagctgaaaagctagctgatgactgata---gatagcttatagctgaaaagcttgcttat 137  Q
    |||||||||||||| |||| ||||  |||||    |||||||||||||||||||||||||||||    
T  14121 ctgatagctgaaaaactagttgatagctgatgactgatagcttatagctgaaaagcttgcttat 14184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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