View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1699-Insertion-4 (Length: 400)

Name: NF1699-Insertion-4
Description: NF1699
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1699-Insertion-4
NF1699-Insertion-4
[»] scaffold0007 (2 HSPs)
scaffold0007 (64-354)||(254919-255221)
scaffold0007 (349-400)||(255255-255306)
[»] chr3 (69 HSPs)
chr3 (65-354)||(949770-950071)
chr3 (64-354)||(14172353-14172658)
chr3 (8-63)||(8196217-8196272)
chr3 (8-63)||(50826858-50826913)
chr3 (8-63)||(50848940-50848995)
chr3 (8-65)||(4435929-4435986)
chr3 (8-65)||(10720698-10720755)
chr3 (8-65)||(27880678-27880735)
chr3 (8-64)||(10713425-10713481)
chr3 (7-63)||(17630608-17630664)
chr3 (349-400)||(949685-949736)
chr3 (8-63)||(2214919-2214974)
chr3 (8-63)||(4456720-4456775)
chr3 (8-63)||(14426133-14426188)
chr3 (8-63)||(14520712-14520767)
chr3 (8-63)||(17360578-17360633)
chr3 (8-63)||(17365220-17365275)
chr3 (8-63)||(17935573-17935628)
chr3 (8-63)||(18041378-18041433)
chr3 (8-63)||(22094871-22094926)
chr3 (8-63)||(27550643-27550698)
chr3 (8-63)||(41016895-41016950)
chr3 (8-63)||(51922060-51922115)
chr3 (8-66)||(11918194-11918252)
chr3 (8-65)||(8204026-8204083)
chr3 (8-65)||(11932765-11932822)
chr3 (8-65)||(15694920-15694977)
chr3 (8-64)||(15711523-15711579)
chr3 (8-64)||(18949440-18949496)
chr3 (8-63)||(1004109-1004164)
chr3 (8-63)||(3712097-3712152)
chr3 (8-63)||(8153128-8153183)
chr3 (349-400)||(14172268-14172319)
chr3 (8-63)||(17562687-17562742)
chr3 (12-63)||(18900359-18900410)
chr3 (8-63)||(27338859-27338914)
chr3 (8-63)||(27979084-27979139)
chr3 (8-63)||(30062629-30062684)
chr3 (8-65)||(2256929-2256986)
chr3 (8-64)||(13847668-13847725)
chr3 (8-65)||(22952197-22952254)
chr3 (8-65)||(25265100-25265157)
chr3 (8-63)||(13555694-13555750)
chr3 (11-63)||(18351533-18351585)
chr3 (8-63)||(13507239-13507294)
chr3 (8-55)||(16291195-16291242)
chr3 (8-63)||(22966171-22966226)
chr3 (8-63)||(25274594-25274649)
chr3 (8-63)||(29730411-29730466)
chr3 (8-55)||(31278981-31279028)
chr3 (8-65)||(5144263-5144320)
chr3 (8-65)||(6564103-6564160)
chr3 (8-65)||(18881926-18881983)
chr3 (8-65)||(24215982-24216039)
chr3 (21-65)||(15697231-15697275)
chr3 (8-63)||(6577772-6577827)
chr3 (8-55)||(15675078-15675125)
chr3 (8-63)||(43468073-43468128)
chr3 (8-54)||(1480383-1480429)
chr3 (8-54)||(4503364-4503410)
chr3 (8-54)||(7063629-7063675)
chr3 (8-54)||(7096476-7096522)
chr3 (8-54)||(12469161-12469207)
chr3 (8-54)||(13275204-13275250)
chr3 (8-55)||(15683620-15683667)
chr3 (8-47)||(27957193-27957232)
chr3 (8-54)||(6293524-6293570)
chr3 (19-64)||(39707358-39707404)
chr3 (262-318)||(36230903-36230959)
[»] chr5 (49 HSPs)
chr5 (64-354)||(7574052-7574354)
chr5 (8-65)||(20370576-20370633)
chr5 (8-65)||(20396264-20396321)
chr5 (8-65)||(28845497-28845554)
chr5 (8-65)||(36458926-36458983)
chr5 (8-64)||(1726618-1726674)
chr5 (8-64)||(31424070-31424126)
chr5 (8-64)||(33835129-33835185)
chr5 (8-63)||(23348542-23348597)
chr5 (8-63)||(28854107-28854162)
chr5 (8-63)||(29190423-29190478)
chr5 (8-63)||(31413164-31413219)
chr5 (8-63)||(43596506-43596561)
chr5 (8-63)||(43629300-43629355)
chr5 (8-65)||(24963752-24963809)
chr5 (8-65)||(26078355-26078412)
chr5 (8-65)||(26088334-26088391)
chr5 (8-65)||(33843827-33843884)
chr5 (8-63)||(19226171-19226226)
chr5 (8-63)||(24955294-24955349)
chr5 (8-63)||(41093548-41093603)
chr5 (354-400)||(7573967-7574013)
chr5 (8-65)||(27223146-27223203)
chr5 (8-65)||(27232617-27232674)
chr5 (8-64)||(27220140-27220196)
chr5 (8-55)||(17642768-17642815)
chr5 (8-55)||(21856805-21856852)
chr5 (8-63)||(21931711-21931765)
chr5 (8-65)||(359517-359575)
chr5 (8-65)||(3491532-3491590)
chr5 (8-65)||(11812421-11812478)
chr5 (8-65)||(12170127-12170184)
chr5 (8-65)||(12179556-12179613)
chr5 (8-65)||(20378056-20378113)
chr5 (8-63)||(344880-344936)
chr5 (8-63)||(3476764-3476820)
chr5 (8-63)||(11802347-11802402)
chr5 (8-63)||(20386845-20386900)
chr5 (8-47)||(21850652-21850691)
chr5 (8-47)||(21858566-21858605)
chr5 (8-63)||(27064373-27064428)
chr5 (8-54)||(23985047-23985093)
chr5 (8-54)||(31548052-31548098)
chr5 (8-55)||(23039398-23039445)
chr5 (8-54)||(23637631-23637678)
chr5 (8-54)||(23827754-23827801)
chr5 (8-54)||(23835212-23835259)
chr5 (8-54)||(26177373-26177419)
chr5 (8-63)||(21986165-21986221)
[»] chr1 (40 HSPs)
chr1 (8-174)||(21055225-21055391)
chr1 (259-354)||(51383423-51383520)
chr1 (8-63)||(32135108-32135163)
chr1 (8-63)||(43456394-43456449)
chr1 (8-66)||(28991103-28991161)
chr1 (8-65)||(13452382-13452439)
chr1 (8-65)||(31541508-31541565)
chr1 (8-63)||(13461277-13461332)
chr1 (8-63)||(13803853-13803908)
chr1 (8-63)||(21244871-21244926)
chr1 (8-63)||(23355413-23355468)
chr1 (8-63)||(31550077-31550132)
chr1 (8-63)||(35097378-35097433)
chr1 (8-63)||(41744502-41744557)
chr1 (8-65)||(2385516-2385573)
chr1 (8-63)||(3431401-3431456)
chr1 (8-63)||(20502461-20502516)
chr1 (8-55)||(22479978-22480025)
chr1 (8-63)||(23952467-23952522)
chr1 (8-63)||(28460134-28460189)
chr1 (17-66)||(21496879-21496928)
chr1 (8-63)||(13477387-13477442)
chr1 (8-55)||(22495944-22495991)
chr1 (8-63)||(38123427-38123482)
chr1 (8-63)||(51055115-51055170)
chr1 (8-54)||(3350534-3350580)
chr1 (8-53)||(18780187-18780232)
chr1 (8-65)||(31553708-31553765)
chr1 (8-66)||(25337238-25337297)
chr1 (8-63)||(31562842-31562897)
chr1 (8-63)||(46776801-46776856)
chr1 (8-54)||(8514048-8514094)
chr1 (8-54)||(12464053-12464099)
chr1 (8-54)||(22472906-22472952)
chr1 (8-54)||(27311794-27311840)
chr1 (8-54)||(34336620-34336666)
chr1 (246-301)||(3576574-3576629)
chr1 (8-47)||(16135468-16135507)
chr1 (8-54)||(32608940-32608986)
chr1 (354-394)||(51383324-51383364)
[»] chr7 (46 HSPs)
chr7 (207-354)||(40724934-40725081)
chr7 (8-63)||(18302861-18302916)
chr7 (8-65)||(1900831-1900888)
chr7 (8-65)||(5208095-5208152)
chr7 (8-64)||(44075013-44075069)
chr7 (8-63)||(1886732-1886787)
chr7 (8-63)||(5198980-5199035)
chr7 (8-63)||(13478068-13478123)
chr7 (8-63)||(17739183-17739238)
chr7 (8-63)||(24185927-24185982)
chr7 (8-65)||(568162-568219)
chr7 (8-65)||(2549255-2549312)
chr7 (8-65)||(13491878-13491935)
chr7 (8-65)||(13833058-13833115)
chr7 (8-63)||(558254-558309)
chr7 (8-63)||(2563141-2563196)
chr7 (8-63)||(4940091-4940146)
chr7 (8-63)||(16545758-16545813)
chr7 (8-63)||(16619849-16619904)
chr7 (64-115)||(40724842-40724893)
chr7 (349-400)||(40725115-40725166)
chr7 (17-63)||(4661689-4661735)
chr7 (8-64)||(10449638-10449694)
chr7 (8-63)||(13841088-13841143)
chr7 (8-63)||(16889549-16889604)
chr7 (8-63)||(17514148-17514203)
chr7 (8-63)||(17539011-17539066)
chr7 (8-63)||(36476574-36476629)
chr7 (8-54)||(16909646-16909692)
chr7 (8-54)||(38255731-38255777)
chr7 (8-54)||(38263306-38263352)
chr7 (8-65)||(27975208-27975265)
chr7 (8-65)||(16120490-16120549)
chr7 (8-65)||(16147230-16147289)
chr7 (8-63)||(27965757-27965812)
chr7 (8-63)||(29097036-29097091)
chr7 (8-63)||(48498511-48498566)
chr7 (8-65)||(15185847-15185905)
chr7 (8-65)||(15200467-15200525)
chr7 (8-54)||(16228062-16228108)
chr7 (8-54)||(29023724-29023770)
chr7 (8-54)||(40680271-40680317)
chr7 (9-54)||(16244941-16244986)
chr7 (8-65)||(29082277-29082334)
chr7 (10-53)||(43600896-43600939)
chr7 (8-54)||(17211592-17211638)
[»] chr6 (51 HSPs)
chr6 (8-63)||(13828101-13828156)
chr6 (8-64)||(33300430-33300486)
chr6 (210-320)||(11926315-11926423)
chr6 (8-63)||(30822981-30823036)
chr6 (8-62)||(25714057-25714111)
chr6 (8-65)||(25699903-25699960)
chr6 (8-65)||(27537721-27537778)
chr6 (8-65)||(28304536-28304593)
chr6 (8-63)||(5008249-5008304)
chr6 (8-63)||(5486923-5486978)
chr6 (8-63)||(8719657-8719712)
chr6 (8-63)||(13492337-13492392)
chr6 (8-63)||(15389214-15389269)
chr6 (8-63)||(19826377-19826432)
chr6 (8-63)||(27551930-27551985)
chr6 (8-62)||(35090139-35090193)
chr6 (8-65)||(18219936-18219993)
chr6 (8-64)||(16635720-16635776)
chr6 (8-64)||(23927897-23927953)
chr6 (8-64)||(24920780-24920836)
chr6 (8-60)||(25552722-25552774)
chr6 (8-63)||(5996964-5997019)
chr6 (8-63)||(14475896-14475951)
chr6 (8-63)||(16302770-16302825)
chr6 (8-63)||(16589322-16589377)
chr6 (8-63)||(16606003-16606058)
chr6 (8-63)||(16645677-16645732)
chr6 (8-63)||(18204939-18204994)
chr6 (8-63)||(20530498-20530553)
chr6 (8-63)||(21708370-21708425)
chr6 (8-63)||(25993888-25993943)
chr6 (8-63)||(27960582-27960637)
chr6 (8-65)||(18112234-18112291)
chr6 (8-65)||(28267591-28267648)
chr6 (8-65)||(28346340-28346397)
chr6 (8-63)||(11063978-11064034)
chr6 (8-64)||(15141673-15141729)
chr6 (8-55)||(335295-335342)
chr6 (8-63)||(12451321-12451376)
chr6 (8-63)||(18126779-18126834)
chr6 (8-63)||(30995327-30995382)
chr6 (8-65)||(27057289-27057346)
chr6 (8-63)||(27047047-27047102)
chr6 (8-54)||(16097852-16097898)
chr6 (8-54)||(18587439-18587485)
chr6 (8-54)||(21358422-21358468)
chr6 (8-54)||(23962404-23962450)
chr6 (8-54)||(23982514-23982560)
chr6 (8-55)||(18842960-18843007)
chr6 (8-54)||(24485252-24485298)
chr6 (8-54)||(25654293-25654339)
[»] chr4 (30 HSPs)
chr4 (8-65)||(8101539-8101596)
chr4 (8-63)||(8092736-8092791)
chr4 (8-63)||(12998880-12998935)
chr4 (8-66)||(27341509-27341567)
chr4 (8-64)||(20865658-20865714)
chr4 (8-63)||(773498-773553)
chr4 (8-63)||(12425216-12425271)
chr4 (8-63)||(25652449-25652504)
chr4 (8-63)||(26033961-26034016)
chr4 (8-63)||(52298039-52298094)
chr4 (8-63)||(55584160-55584215)
chr4 (8-65)||(21530103-21530160)
chr4 (8-63)||(4522214-4522269)
chr4 (8-63)||(10640695-10640750)
chr4 (8-63)||(18010387-18010442)
chr4 (8-65)||(1889457-1889514)
chr4 (8-65)||(10786969-10787026)
chr4 (8-63)||(1875344-1875399)
chr4 (8-55)||(21398827-21398874)
chr4 (8-63)||(21810865-21810920)
chr4 (8-63)||(4747401-4747456)
chr4 (8-54)||(14718505-14718551)
chr4 (8-54)||(14736790-14736836)
chr4 (8-54)||(19644871-19644917)
chr4 (8-54)||(26210390-26210436)
chr4 (8-54)||(26219150-26219196)
chr4 (8-54)||(19760136-19760183)
chr4 (8-54)||(19774892-19774939)
chr4 (8-54)||(25247163-25247209)
chr4 (8-54)||(34843008-34843054)
[»] scaffold0056 (2 HSPs)
scaffold0056 (8-64)||(30231-30287)
scaffold0056 (11-65)||(11532-11586)
[»] chr2 (58 HSPs)
chr2 (8-64)||(26717499-26717555)
chr2 (8-63)||(19655563-19655618)
chr2 (8-63)||(41232315-41232370)
chr2 (8-65)||(15951496-15951553)
chr2 (8-65)||(25493419-25493476)
chr2 (8-65)||(26731631-26731688)
chr2 (8-65)||(35140176-35140233)
chr2 (8-65)||(42572998-42573055)
chr2 (8-64)||(35148517-35148573)
chr2 (8-63)||(6855957-6856012)
chr2 (8-63)||(15942988-15943043)
chr2 (8-63)||(20921034-20921089)
chr2 (8-63)||(25496152-25496207)
chr2 (8-63)||(26896528-26896583)
chr2 (8-63)||(28481545-28481600)
chr2 (8-63)||(38153999-38154054)
chr2 (8-63)||(38611415-38611470)
chr2 (8-63)||(42564376-42564431)
chr2 (8-63)||(44375358-44375413)
chr2 (8-63)||(44390939-44390994)
chr2 (8-65)||(21111558-21111615)
chr2 (8-65)||(34541818-34541875)
chr2 (8-65)||(42386322-42386379)
chr2 (8-65)||(42401206-42401263)
chr2 (8-63)||(17684935-17684990)
chr2 (8-63)||(20364529-20364584)
chr2 (8-63)||(29855545-29855600)
chr2 (8-63)||(34068674-34068729)
chr2 (8-63)||(34527846-34527901)
chr2 (8-63)||(14630606-14630662)
chr2 (8-64)||(24293747-24293803)
chr2 (8-63)||(35304898-35304954)
chr2 (8-63)||(10681324-10681379)
chr2 (8-55)||(11622049-11622096)
chr2 (8-63)||(15600936-15600991)
chr2 (8-63)||(21151634-21151689)
chr2 (8-63)||(34437292-34437347)
chr2 (8-63)||(35040258-35040313)
chr2 (8-54)||(33306564-33306610)
chr2 (8-61)||(24287178-24287231)
chr2 (8-64)||(34708325-34708381)
chr2 (8-60)||(42247477-42247529)
chr2 (8-63)||(2653234-2653289)
chr2 (8-63)||(3754885-3754940)
chr2 (8-63)||(16284153-16284208)
chr2 (8-63)||(30683105-30683160)
chr2 (8-55)||(31354719-31354766)
chr2 (8-54)||(22187539-22187585)
chr2 (8-54)||(27680932-27680978)
chr2 (8-65)||(3764934-3764991)
chr2 (8-65)||(16274977-16275034)
chr2 (8-63)||(21320618-21320675)
chr2 (8-65)||(21858555-21858612)
chr2 (8-52)||(23283970-23284014)
chr2 (8-63)||(21850122-21850177)
chr2 (8-54)||(30524527-30524573)
chr2 (8-54)||(42245752-42245798)
chr2 (8-64)||(34685903-34685960)
[»] scaffold0462 (1 HSPs)
scaffold0462 (8-63)||(13635-13690)
[»] scaffold0278 (1 HSPs)
scaffold0278 (8-63)||(10727-10782)
[»] chr8 (37 HSPs)
chr8 (8-63)||(25796882-25796937)
chr8 (8-65)||(22103422-22103479)
chr8 (8-65)||(39844050-39844107)
chr8 (8-64)||(17529380-17529436)
chr8 (8-64)||(25584850-25584906)
chr8 (8-64)||(30939837-30939893)
chr8 (8-64)||(31000604-31000660)
chr8 (8-63)||(1388092-1388147)
chr8 (8-63)||(4837362-4837417)
chr8 (8-63)||(4842807-4842862)
chr8 (8-63)||(39836010-39836065)
chr8 (8-65)||(14204846-14204903)
chr8 (8-64)||(17975988-17976044)
chr8 (8-63)||(14219487-14219542)
chr8 (8-63)||(26871212-26871267)
chr8 (8-63)||(36249057-36249112)
chr8 (8-63)||(36576543-36576598)
chr8 (8-65)||(15832260-15832317)
chr8 (8-65)||(16761149-16761206)
chr8 (8-63)||(14335743-14335799)
chr8 (8-64)||(17662266-17662322)
chr8 (8-55)||(6582682-6582729)
chr8 (8-63)||(16775586-16775641)
chr8 (8-55)||(17129630-17129677)
chr8 (8-55)||(19851130-19851177)
chr8 (8-55)||(19857166-19857213)
chr8 (8-63)||(23922855-23922910)
chr8 (8-63)||(25719363-25719418)
chr8 (8-59)||(36252300-36252351)
chr8 (8-65)||(17681394-17681451)
chr8 (8-63)||(23600859-23600915)
chr8 (17-63)||(4583926-4583972)
chr8 (8-54)||(22418463-22418509)
chr8 (8-54)||(31207505-31207551)
chr8 (10-54)||(16190398-16190442)
chr8 (8-55)||(22366732-22366779)
chr8 (8-54)||(23093056-23093102)
[»] scaffold0156 (1 HSPs)
scaffold0156 (8-65)||(29567-29624)
[»] scaffold0044 (2 HSPs)
scaffold0044 (8-65)||(80336-80393)
scaffold0044 (8-63)||(63938-63993)
[»] scaffold0015 (3 HSPs)
scaffold0015 (8-64)||(195063-195119)
scaffold0015 (8-63)||(188876-188931)
scaffold0015 (8-63)||(159406-159462)
[»] scaffold0431 (1 HSPs)
scaffold0431 (8-63)||(4704-4759)
[»] scaffold0392 (1 HSPs)
scaffold0392 (8-63)||(16395-16450)
[»] scaffold0222 (1 HSPs)
scaffold0222 (8-63)||(9802-9857)
[»] scaffold0599 (1 HSPs)
scaffold0599 (8-66)||(9945-10003)
[»] scaffold0002 (1 HSPs)
scaffold0002 (8-62)||(109700-109754)
[»] scaffold1804 (1 HSPs)
scaffold1804 (8-63)||(304-359)
[»] scaffold0389 (1 HSPs)
scaffold0389 (8-63)||(9911-9966)
[»] scaffold0257 (1 HSPs)
scaffold0257 (8-63)||(10490-10545)
[»] scaffold0192 (1 HSPs)
scaffold0192 (8-63)||(21929-21984)
[»] scaffold0077 (2 HSPs)
scaffold0077 (8-63)||(29775-29830)
scaffold0077 (8-65)||(32640-32697)
[»] scaffold0031 (1 HSPs)
scaffold0031 (8-63)||(346-401)
[»] scaffold0019 (1 HSPs)
scaffold0019 (8-63)||(172676-172731)
[»] scaffold0155 (1 HSPs)
scaffold0155 (8-65)||(21449-21506)
[»] scaffold0023 (2 HSPs)
scaffold0023 (8-65)||(136319-136376)
scaffold0023 (8-63)||(145283-145338)
[»] scaffold0671 (1 HSPs)
scaffold0671 (8-55)||(8432-8479)
[»] scaffold0561 (1 HSPs)
scaffold0561 (8-63)||(19-74)
[»] scaffold0357 (1 HSPs)
scaffold0357 (8-63)||(4573-4628)
[»] scaffold0043 (1 HSPs)
scaffold0043 (8-55)||(63534-63581)
[»] scaffold1199 (1 HSPs)
scaffold1199 (8-66)||(2207-2265)
[»] scaffold0605 (1 HSPs)
scaffold0605 (8-54)||(7744-7790)
[»] scaffold0455 (1 HSPs)
scaffold0455 (8-55)||(3579-3626)
[»] scaffold0451 (1 HSPs)
scaffold0451 (8-63)||(4844-4899)
[»] scaffold0386 (1 HSPs)
scaffold0386 (8-63)||(19-74)
[»] scaffold0945 (1 HSPs)
scaffold0945 (8-54)||(134-180)
[»] scaffold0233 (1 HSPs)
scaffold0233 (8-54)||(15382-15428)
[»] scaffold0047 (1 HSPs)
scaffold0047 (8-54)||(83737-83783)
[»] scaffold0429 (1 HSPs)
scaffold0429 (8-65)||(15181-15238)
[»] scaffold0046 (1 HSPs)
scaffold0046 (8-55)||(55863-55910)
[»] scaffold0273 (1 HSPs)
scaffold0273 (8-54)||(22717-22763)


Alignment Details
Target: scaffold0007 (Bit Score: 225; Significance: 1e-124; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 64 - 354
Target Start/End: Original strand, 254919 - 255221
Alignment:
Q  64 gatgagtaagtccaactttgtgttgcttttacaagccatatggtttaacaattaagttatgcttcatgtttgatt-aaaatttccaattggttttattcc 162  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  254919 gatgactaagtccaactttgtgttgcttttacaagccatctggtttaacaattaagttatgcttcatgtttgattcaaaatttccaattggttttattcc 255018  T
Q  163 ttaccaatgtaggtgtaaatcggagtaatgaagcccaatattaa-----------ccgctaatgtaaaatggcttggagcaagataataacgcaatgaat 251  Q
    |||||||||||||||| ||||||||||||||||| |||||||||           ||||||||||||||||||||||||||||||||||||||||||||     
T  255019 ttaccaatgtaggtgtgaatcggagtaatgaagcacaatattaaggtgatagtttccgctaatgtaaaatggcttggagcaagataataacgcaatgaac 255118  T
Q  252 atggtagcttaatgttggagatgaaaagaagactgagttttgatgaagtaaaagccttacaaaagagctttaagttgaaaaagctagatcaaacgtgata 351  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  255119 atggtagcttaatgttggagatgaaaagaagaccgagttttaatgaagtaaaagccttacaaaagagctttaagttgaacaagctagatcaaacgtgata 255218  T
Q  352 tta 354  Q
    |||    
T  255219 tta 255221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 349 - 400
Target Start/End: Original strand, 255255 - 255306
Alignment:
Q  349 atattaatcactttgattgcacaaataaataacccatttaaaatccttttta 400  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  255255 atatcaatcactttgattgcacaaataaataacccatttgaaatccttttta 255306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 216; Significance: 1e-118; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 65 - 354
Target Start/End: Complemental strand, 950071 - 949770
Alignment:
Q  65 atgagtaagtccaactttgtgttgcttttacaagccatatggtttaacaattaagttatgcttcatgtttgatt-aaaatttccaattggttttattcct 163  Q
    |||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  950071 atgactaagtccaactttgtgttgcttttacaagccatctgatttaacaattaagttatgcttcatgtttgattcaaaatttccaattggttttattcct 949972  T
Q  164 taccaatgtaggtgtaaatcggagtaatgaagcccaatattaa-----------ccgctaatgtaaaatggcttggagcaagataataacgcaatgaata 252  Q
    |||||  |||||||| ||||||||||||||||| |||||| ||           |||||||||||||||||||||||||||||||||||||||||||| |    
T  949971 taccatagtaggtgtgaatcggagtaatgaagcacaatatgaagatgatagtttccgctaatgtaaaatggcttggagcaagataataacgcaatgaaca 949872  T
Q  253 tggtagcttaatgttggagatgaaaagaagactgagttttgatgaagtaaaagccttacaaaagagctttaagttgaaaaagctagatcaaacgtgatat 352  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  949871 tggtagcttaatgttggagatgaaaagaagactgagttttgatgaagtaaaagccttacaaaagagctttaagttgaacaagctagatcaaacgtgatat 949772  T
Q  353 ta 354  Q
    ||    
T  949771 ta 949770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 64 - 354
Target Start/End: Complemental strand, 14172658 - 14172353
Alignment:
Q  64 gatgagtaagtccaactttgtgttgcttttacaagccatat--ggtttaacaattaagttatgcttcatgtttgatt-aaaatttccaattggtttt-at 159  Q
    ||||| |||||||||||||||||||||||||||||||| ||  ||||||||||||||||||| |||||||||||||| |||||||| |||||||||| ||    
T  14172658 gatgactaagtccaactttgtgttgcttttacaagccacatctggtttaacaattaagttatacttcatgtttgattcaaaatttcaaattggtttttat 14172559  T
Q  160 tccttaccaatgtaggtgtaaatcggagtaatgaagcccaatattaa-----------ccgctaatgtaaaatggcttggagcaagataataacgcaatg 248  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||           ||||||||||||||||||||||||||||||||||||||||||    
T  14172558 tccttaccaatgtaggtgtgaatcggagtaatgaagcacaatattaaggtgatagtttccgctaatgtaaaatggcttggagcaagataataacgcaatg 14172459  T
Q  249 aatatggtagcttaatgttggagatgaaaagaagactgagttttgatgaagtaaaagccttacaaaagagctttaagttgaaaaagctagatcaaacgtg 348  Q
    || ||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14172458 aacatggtagattaatgttggagatgaaaagaagacagagttttaatgaagtaaaagccttacaaaagagctttaagttgaacaagctagatcaaacgtg 14172359  T
Q  349 atatta 354  Q
    ||||||    
T  14172358 atatta 14172353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 8196272 - 8196217
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8196272 caaagattaacgattcaaatcaaataatggtttgatatccaaaaatcacgagcaca 8196217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 50826858 - 50826913
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  50826858 caaagattgacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 50826913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 50848995 - 50848940
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  50848995 caaagattgacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 50848940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 4435929 - 4435986
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  4435929 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacaga 4435986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 10720755 - 10720698
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10720755 caaagattgacgattcaaatcaattaatggtttgatatccaaaaatcgcgagcacaga 10720698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 27880678 - 27880735
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  27880678 caaagattgaagattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 27880735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 10713481 - 10713425
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  10713481 caaagattgacgattcaaatcaattaatggtttgatatccaaaaatcgcgagcacag 10713425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 17630608 - 17630664
Alignment:
Q  7 acaaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  17630608 acaaagataaacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 17630664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 400
Target Start/End: Complemental strand, 949736 - 949685
Alignment:
Q  349 atattaatcactttgattgcacaaataaataacccatttaaaatccttttta 400  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  949736 atatcaatcactttgattgcacaaataaataacccatttaaaatccttttta 949685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 2214974 - 2214919
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  2214974 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 2214919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 4456720 - 4456775
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  4456720 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 4456775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 14426133 - 14426188
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  14426133 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 14426188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 14520767 - 14520712
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  14520767 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 14520712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 17360578 - 17360633
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  17360578 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 17360633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 17365220 - 17365275
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  17365220 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 17365275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 17935573 - 17935628
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  17935573 caaagatttacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 17935628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 18041378 - 18041433
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  18041378 caaagattaacgattcaaatcaattaatgatttgatatccgaaaatcacgagcaca 18041433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 22094871 - 22094926
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  22094871 caaagattaacgattcatatcaattaatggtttgatatccgaaaatcacgagcaca 22094926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 27550698 - 27550643
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  27550698 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 27550643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 41016895 - 41016950
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  41016895 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 41016950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 51922115 - 51922060
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  51922115 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 51922060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 11918252 - 11918194
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacagat 66  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  11918252 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcacagat 11918194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 8204083 - 8204026
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| |||||||||||||||||||||||||||| || |||||||||||||||||    
T  8204083 caaagattgacgattcaaatcaattaatggtttgatagccgaaaatcacgagcacaga 8204026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 11932822 - 11932765
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  11932822 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcacaga 11932765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 15694920 - 15694977
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  15694920 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcacaga 15694977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 15711523 - 15711579
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||    
T  15711523 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcacag 15711579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 18949496 - 18949440
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  18949496 caaagattgacgatttaaatcaattaatggtttgatatccgaaaatcacgagcacag 18949440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 1004164 - 1004109
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  1004164 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 1004109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 3712097 - 3712152
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  3712097 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatctcgagcaca 3712152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 8153183 - 8153128
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||| |||||||||||||||||||||||| |||||||||||||||    
T  8153183 caaagattgacgatttaaatcaattaatggtttgatatccgaaaatcacgagcaca 8153128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 349 - 400
Target Start/End: Complemental strand, 14172319 - 14172268
Alignment:
Q  349 atattaatcactttgattgcacaaataaataacccatttaaaatccttttta 400  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  14172319 atatcaatcactttgattgcacaaataaataacccatttgaaatccttttta 14172268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 17562742 - 17562687
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  17562742 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 17562687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 18900410 - 18900359
Alignment:
Q  12 gattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  18900410 gattgacgattcaaatcaattaatggtttggtatccaaaaatcacgagcaca 18900359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 27338914 - 27338859
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||| |||||||||||||||||||||||||| |||||||||||||||    
T  27338914 caaagattgacgagtcaaatcaattaatggtttgatatccgaaaatcacgagcaca 27338859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 27979084 - 27979139
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  27979084 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 27979139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 30062684 - 30062629
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| || |||||||||||||||||||||||||||| |||||||||||||||    
T  30062684 caaagattgacaattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 30062629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 2256929 - 2256986
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||| ||| ||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  2256929 caaatattgacgatgcaaatcaattaatggtttgatatccgaaaatcacgagcacaga 2256986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 13847725 - 13847668
Alignment:
Q  8 caaagattaacgattcaaa-tcaattaatggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  13847725 caaagattgacgattcaaaatcaattaatggtttgatatccgaaaatcacgagcacag 13847668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 22952197 - 22952254
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  22952197 caaagattgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcacaga 22952254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 25265100 - 25265157
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  25265100 caaagattgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcacaga 25265157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 13555694 - 13555750
Alignment:
Q  8 caaagattaacgattcaaa-tcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||    
T  13555694 caaagattgacgattcaaaatcaattaatggtttgatatccgaaaatcacgagcaca 13555750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 18351533 - 18351585
Alignment:
Q  11 agattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    ||||| || |||||||||||||||||||||||||||| |||||||||||||||    
T  18351533 agattgacaattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 18351585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 13507294 - 13507239
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| | ||||||||||||||||||||||||||||| |||||||| ||||||    
T  13507294 caaagattgaagattcaaatcaattaatggtttgatatccgaaaatcacaagcaca 13507239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 16291195 - 16291242
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatca 55  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  16291195 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatca 16291242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 22966171 - 22966226
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||    
T  22966171 caaagattgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 22966226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 25274594 - 25274649
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||    
T  25274594 caaagattgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 25274649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 29730466 - 29730411
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||| ||||||||||||||| |||||| ||||||||    
T  29730466 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatcgcgagcaca 29730411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 31278981 - 31279028
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatca 55  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  31278981 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatca 31279028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 5144320 - 5144263
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| |||||||||||||||||||||||||| |||| ||||||  |||||||||    
T  5144320 caaagattgacgattcaaatcaattaatggtttgacatccgaaaatcgtgagcacaga 5144263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 6564103 - 6564160
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||  |||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  6564103 caaagatcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcacaga 6564160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 18881983 - 18881926
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||||||| ||||  ||||||| |||||||||    
T  18881983 caaagattgacgattcaaatcaattaatggtttggtatctgaaaatcatgagcacaga 18881926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 24216039 - 24215982
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||| ||||||||||| ||||||||||||||| |||||| ||||||||||    
T  24216039 caaagattgacgtttcaaatcaatcaatggtttgatatccgaaaatcgcgagcacaga 24215982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 15697231 - 15697275
Alignment:
Q  21 ttcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||    
T  15697231 ttcaaatcaattaatggtttgatatccgaaaatcgcgagcacaga 15697275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 6577772 - 6577827
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||  |||||||||||||||||||||||||| |||| |||||| ||||||||    
T  6577772 caaagatcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 6577827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 15675125 - 15675078
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatca 55  Q
    |||||||  ||||||||||||||||||||||||||||||| |||||||    
T  15675125 caaagatcgacgattcaaatcaattaatggtttgatatccgaaaatca 15675078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 43468128 - 43468073
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||| ||||||||||||||||||||| | ||||| |||||||||    
T  43468128 caaagattgacgattcgaatcaattaatggtttgatattcgaaaattacgagcaca 43468073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 1480383 - 1480429
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  1480383 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 1480429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 4503410 - 4503364
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  4503410 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 4503364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 7063675 - 7063629
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  7063675 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 7063629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 7096522 - 7096476
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  7096522 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 7096476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 12469161 - 12469207
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  12469161 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 12469207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 13275204 - 13275250
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  13275204 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 13275250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 15683667 - 15683620
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatca 55  Q
    |||||||  |||||||||||||||||| |||||||||||| |||||||    
T  15683667 caaagatcgacgattcaaatcaattaaaggtttgatatccgaaaatca 15683620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 47
Target Start/End: Complemental strand, 27957232 - 27957193
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatcc 47  Q
    |||| ||| |||||||||||||||||||||||||||||||    
T  27957232 caaaaattgacgattcaaatcaattaatggtttgatatcc 27957193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 6293570 - 6293524
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||  |||||||||||||||||||||||||| |||| ||||||    
T  6293570 caaagatcgacgattcaaatcaattaatggtttgacatccgaaaatc 6293524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 39707358 - 39707404
Alignment:
Q  19 gattcaaatcaattaa-tggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||||||||||| ||||||||||||| |||||| |||||||||    
T  39707358 gattcaaatcaattaaatggtttgatatccgaaaatcgcgagcacag 39707404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 36230959 - 36230903
Alignment:
Q  262 aatgttggagatgaaaagaagactgagttttgatgaagtaaaagccttacaaaagag 318  Q
    ||||||||||| ||||||||||||  ||| |||| |||||||||| ||| |||||||    
T  36230959 aatgttggagaagaaaagaagacttggttatgatcaagtaaaagctttagaaaagag 36230903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 213; Significance: 1e-117; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 64 - 354
Target Start/End: Complemental strand, 7574354 - 7574052
Alignment:
Q  64 gatgagtaagtccaactttgtgttgcttttacaagccatatggtttaacaattaagttatgcttcatgtttgatt-aaaatttccaattggttttattcc 162  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  7574354 gatgactaagtccaactttgtgttgcttttacaagccatctggtttaacaattaagttatgcttcatgtttgattcaaaatttccaattgattttattcc 7574255  T
Q  163 ttaccaatgtaggtgtaaatcggagtaatgaagcccaatattaa-----------ccgctaatgtaaaatggcttggagcaagataataacgcaatgaat 251  Q
    |||||||||| ||||| ||||||||||||||||| |||||||||           ||||||||||||||||||||||||||||||||||||||||||||     
T  7574254 ttaccaatgtcggtgtgaatcggagtaatgaagcacaatattaaggtgatagtttccgctaatgtaaaatggcttggagcaagataataacgcaatgaac 7574155  T
Q  252 atggtagcttaatgttggagatgaaaagaagactgagttttgatgaagtaaaagccttacaaaagagctttaagttgaaaaagctagatcaaacgtgata 351  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||    
T  7574154 atggtagcttaatgttggagatgaaaagaagactgggttttgatgaagtaaaagccttaaaaaagagctttcagttgaacaagctagatcaaacgtgata 7574055  T
Q  352 tta 354  Q
    |||    
T  7574054 tta 7574052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 20370633 - 20370576
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20370633 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacaga 20370576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 20396321 - 20396264
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20396321 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacaga 20396264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 28845497 - 28845554
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  28845497 caaagattaacgattcatatcaattaatggtttgatatccgaaaatcacgagcacaga 28845554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 36458926 - 36458983
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36458926 caaagattgacgattcaaatcaattaatggtttgatatccaaaaatcgcgagcacaga 36458983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 1726674 - 1726618
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  1726674 caaagattaacgattcaaatcagttaatggtttgatatccgaaaatcacgagcacag 1726618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 31424070 - 31424126
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31424070 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacag 31424126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 33835185 - 33835129
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  33835185 caaagattgacgattcaaatcaattaatggtttgatatccaaaaatcgcgagcacag 33835129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 23348597 - 23348542
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  23348597 caaagattaacgattcaaatcaattaatggtttgatatccgaaattcacgagcaca 23348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 28854107 - 28854162
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  28854107 caaagattaacgattcatatcaattaatggtttgatatccgaaaatcacgagcaca 28854162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 29190423 - 29190478
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  29190423 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 29190478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 31413164 - 31413219
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  31413164 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 31413219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 43596561 - 43596506
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  43596561 caaagattaacgattcaaatcaattaatgatttgatatccgaaaatcacgagcaca 43596506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 43629355 - 43629300
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  43629355 caaagattaacgattcaaatcaattaatgatttgatatccgaaaatcacgagcaca 43629300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 24963809 - 24963752
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  24963809 caaagattgacgattcaaatcaattaatggcttgatatccgaaaatcacgagcacaga 24963752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 26078412 - 26078355
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  26078412 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcacaga 26078355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 26088391 - 26088334
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  26088391 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcacaga 26088334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 33843884 - 33843827
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  33843884 caaagattgacgattcaaatcaattaatggtttgatatccaaaaatcgggagcacaga 33843827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 19226171 - 19226226
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||| |||||||||||||||||||||||| |||||||||||||||    
T  19226171 caaagattgacgatttaaatcaattaatggtttgatatccgaaaatcacgagcaca 19226226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 24955349 - 24955294
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||    
T  24955349 caaagattgacgattcaaatcaattaatggcttgatatccgaaaatcacgagcaca 24955294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 41093603 - 41093548
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  41093603 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcaggagcaca 41093548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 354 - 400
Target Start/End: Complemental strand, 7574013 - 7573967
Alignment:
Q  354 aatcactttgattgcacaaataaataacccatttaaaatccttttta 400  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  7574013 aatcactttgattgcacaaataaataacccatttgaaatccttttta 7573967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 27223203 - 27223146
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  27223203 caaagattgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcacaga 27223146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 27232674 - 27232617
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  27232674 caaagattgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcacaga 27232617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 27220196 - 27220140
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||| |||||||||||||||||||||||||| |||| |||||| |||||||||    
T  27220196 caaagattgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcacag 27220140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 17642768 - 17642815
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatca 55  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  17642768 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatca 17642815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 21856852 - 21856805
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatca 55  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  21856852 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatca 21856805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 21931711 - 21931765
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||    
T  21931711 caaagattgacgattcaaatcaattaatggtttgat-tccgaaaatcacgagcaca 21931765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 359575 - 359517
Alignment:
Q  8 caaagattaacgattcaaa-tcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| |||||||||| |||||||||||||||| |||| |||||||||||||||||    
T  359575 caaagattgacgattcaaaatcaattaatggtttgacatccgaaaatcacgagcacaga 359517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 3491590 - 3491532
Alignment:
Q  8 caaagattaacgattcaaatcaattaa-tggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| |||||||||||||||||| ||||||||||||| |||||| ||||||||||    
T  3491590 caaagattgacgattcaaatcaattaaatggtttgatatccgaaaatcgcgagcacaga 3491532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 11812478 - 11812421
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||  |||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  11812478 caaagatcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcacaga 11812421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 12170184 - 12170127
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||  |||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  12170184 caaagatcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcacaga 12170127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 12179613 - 12179556
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||  |||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  12179613 caaagatcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcacaga 12179556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 20378056 - 20378113
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||  |||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  20378056 caaagatcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcacaga 20378113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 344936 - 344880
Alignment:
Q  8 caaagattaacgattcaaa-tcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||| |||||||||||||||| |||| |||||||||||||||    
T  344936 caaagattgacgattcaaaatcaattaatggtttgacatccgaaaatcacgagcaca 344880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 3476820 - 3476764
Alignment:
Q  8 caaagattaacgattcaaatcaattaa-tggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||||||||||| ||||||||||||| |||||| ||||||||    
T  3476820 caaagattgacgattcaaatcaattaaatggtttgatatccgaaaatcgcgagcaca 3476764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 11802402 - 11802347
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||  |||||||||||||||||||||||||| |||| |||||| ||||||||    
T  11802402 caaagatcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 11802347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 20386845 - 20386900
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||  |||||||||||||||||||||||||| |||| |||||| ||||||||    
T  20386845 caaagatcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 20386900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 47
Target Start/End: Complemental strand, 21850691 - 21850652
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatcc 47  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  21850691 caaagattgacgattcaaatcaattaatggtttgatatcc 21850652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 47
Target Start/End: Complemental strand, 21858605 - 21858566
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatcc 47  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  21858605 caaagattgacgattcaaatcaattaatggtttgatatcc 21858566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 27064373 - 27064428
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||  |||||||||||||||||||||||||| |||| |||||| ||||||||    
T  27064373 caaagatcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 27064428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 23985047 - 23985093
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  23985047 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 23985093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 31548098 - 31548052
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  31548098 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 31548052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 23039398 - 23039445
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatca 55  Q
    |||| ||| ||||||||||||||||||| ||||||||||| |||||||    
T  23039398 caaaaattgacgattcaaatcaattaatagtttgatatccgaaaatca 23039445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 23637631 - 23637678
Alignment:
Q  8 caaagattaacgattcaaatcaatt-aatggtttgatatccaaaaatc 54  Q
    |||||||| |||||||||||||||| ||||||||||||||| ||||||    
T  23637631 caaagattgacgattcaaatcaattaaatggtttgatatccgaaaatc 23637678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 23827801 - 23827754
Alignment:
Q  8 caaagattaacgattcaaatcaatt-aatggtttgatatccaaaaatc 54  Q
    |||||||| |||||||||||||||| ||||||||||||||| ||||||    
T  23827801 caaagattgacgattcaaatcaattaaatggtttgatatccgaaaatc 23827754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 23835259 - 23835212
Alignment:
Q  8 caaagattaacgattcaaatcaatt-aatggtttgatatccaaaaatc 54  Q
    |||||||| |||||||||||||||| ||||||||||||||| ||||||    
T  23835259 caaagattgacgattcaaatcaattaaatggtttgatatccgaaaatc 23835212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 26177373 - 26177419
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| || |||||||||||| ||||||    
T  26177373 caaagattgacgattcaaatcaatcaagggtttgatatccgaaaatc 26177419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 21986221 - 21986165
Alignment:
Q  8 caaagattaacgattcaaatcaatt-aatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||||||||| |||||||||| |||| ||||||  |||||||    
T  21986221 caaagattgacgattcaaatcaattaaatggtttgacatccgaaaatcgtgagcaca 21986165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 159; Significance: 1e-84; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 8 - 174
Target Start/End: Original strand, 21055225 - 21055391
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacagatgagtaagtccaactttgtgttgcttttacaagccatatggt 107  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21055225 caaagattaacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacagatgagtaagtccaactttgtgttgcttttacaagccatctggt 21055324  T
Q  108 ttaacaattaagttatgcttcatgtttgattaaaatttccaattggttttattccttaccaatgtag 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21055325 ttaacaattaagttatgcttcatgtttgattaaaatttccaattggttttattccttaccaatgtag 21055391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 259 - 354
Target Start/End: Complemental strand, 51383520 - 51383423
Alignment:
Q  259 cttaatgttggagatgaaaagaagactgagttttgatgaagtaaaagccttacaaaagagctttaagttg---aaaaagctagatcaaacgtgatatta 354  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| | || |||||||||||||||||   || |||||||| ||||||| ||||||    
T  51383520 cttaatgttggagatgaaaagaagactgagttttgatcaagtaaaaggc-tataaaagagctttaagttggacaacaagctagagcaaacgtaatatta 51383423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 32135163 - 32135108
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  32135163 caaagattaacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 32135108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 43456394 - 43456449
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  43456394 caaagattaacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 43456449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 28991161 - 28991103
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacagat 66  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  28991161 caaagatttacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacagat 28991103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 13452382 - 13452439
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13452382 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacaga 13452439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 31541508 - 31541565
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31541508 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacaga 31541565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 13461277 - 13461332
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  13461277 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 13461332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 13803908 - 13803853
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  13803908 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 13803853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 21244926 - 21244871
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  21244926 caaagattgacgattcaaatcaattaatggtttgatatccaaaaatcgcgagcaca 21244871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 23355468 - 23355413
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  23355468 caaagattatcgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 23355413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 31550077 - 31550132
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  31550077 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 31550132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 35097433 - 35097378
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  35097433 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 35097378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 41744557 - 41744502
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  41744557 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 41744502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 2385516 - 2385573
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  2385516 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcatgagcacaga 2385573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 3431456 - 3431401
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||    
T  3431456 caaagattgacgattcaaatcaattaatggcttgatatccgaaaatcacgagcaca 3431401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 20502461 - 20502516
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  20502461 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 20502516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 22479978 - 22480025
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatca 55  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  22479978 caaagattgacgattcaaatcaattaatggtttgatatccaaaaatca 22480025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 23952467 - 23952522
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||||| |||||||||||||||||| |||||||||||||||    
T  23952467 caaagattgacgattcaaatcgattaatggtttgatatccgaaaatcacgagcaca 23952522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 28460134 - 28460189
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  28460134 caaagattaacgattcaattcaatcaatggtttgatatccgaaaatcacgagcaca 28460189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 21496928 - 21496879
Alignment:
Q  17 acgattcaaatcaattaatggtttgatatccaaaaatcacgagcacagat 66  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  21496928 acgattcaaatcaattaatggtttgatatccgaaaatcaggagcacagat 21496879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 13477387 - 13477442
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||| ||||||||||||||||||||||| |||||| ||||||||    
T  13477387 caaagattgacgattctaatcaattaatggtttgatatccgaaaatcgcgagcaca 13477442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 22495944 - 22495991
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatca 55  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  22495944 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatca 22495991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 38123482 - 38123427
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||    
T  38123482 caaagattgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 38123427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 51055170 - 51055115
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||| ||||||||||||||||||||| | |||||||||||||||    
T  51055170 caaagattgacgattcgaatcaattaatggtttgatattcgaaaatcacgagcaca 51055115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 3350580 - 3350534
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||    
T  3350580 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatc 3350534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 18780187 - 18780232
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaat 53  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||    
T  18780187 caaagattgacgattcaaatcaattaatggtttgatatccgaaaat 18780232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 31553708 - 31553765
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||| ||||||||||| ||||||||||||||| |||||| ||||||||||    
T  31553708 caaagattgacgtttcaaatcaatcaatggtttgatatccgaaaatcgcgagcacaga 31553765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 25337238 - 25337297
Alignment:
Q  8 caaagattaacgattcaaa-tcaattaatggtttgatatccaaaaatcacgagcacagat 66  Q
    |||||||| |||||||||| |||||||||||||||| |||| ||| ||||||||||||||    
T  25337238 caaagattgacgattcaaaatcaattaatggtttgacatccgaaactcacgagcacagat 25337297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 31562842 - 31562897
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||| ||||||||||| ||||||||||||||| |||||| ||||||||    
T  31562842 caaagattgacgtttcaaatcaatcaatggtttgatatccgaaaatcgcgagcaca 31562897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 46776856 - 46776801
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    ||||| || |||||||||||||||||||||||||| |||| |||||| ||||||||    
T  46776856 caaaggttgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 46776801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 8514048 - 8514094
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  8514048 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 8514094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 12464099 - 12464053
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  12464099 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 12464053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 22472906 - 22472952
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  22472906 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 22472952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 27311840 - 27311794
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  27311840 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 27311794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 34336666 - 34336620
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  34336666 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 34336620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 301
Target Start/End: Complemental strand, 3576629 - 3576574
Alignment:
Q  246 atgaatatggtagcttaatgttggagatgaaaagaagactgagttttgatgaagta 301  Q
    ||||| |||||||||||||||| |||| ||||||||||||| ||| |||| |||||    
T  3576629 atgaagatggtagcttaatgtttgagaagaaaagaagactgcgttatgatcaagta 3576574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 47
Target Start/End: Original strand, 16135468 - 16135507
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatcc 47  Q
    |||||||| ||||||||||||||| |||||||||||||||    
T  16135468 caaagattgacgattcaaatcaatcaatggtttgatatcc 16135507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 32608940 - 32608986
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||||    
T  32608940 caaagattgacgattcaaatcaatcaatgatttgatatccgaaaatc 32608986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 394
Target Start/End: Complemental strand, 51383364 - 51383324
Alignment:
Q  354 aatcactttgattgcacaaataaataacccatttaaaatcc 394  Q
    |||||||||||||||||||| |||||||||| || ||||||    
T  51383364 aatcactttgattgcacaaacaaataacccactttaaatcc 51383324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 132; Significance: 2e-68; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 207 - 354
Target Start/End: Original strand, 40724934 - 40725081
Alignment:
Q  207 ccgctaatgtaaaatggcttggagcaagataataacgcaatgaatatggtagcttaatgttggagatgaaaagaagactgagttttgatgaagtaaaagc 306  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  40724934 ccgctaatgtaaaatggcttggagcaagataataacgcaatgaacatggtagcttaatgtcggagatggaaagaagactgagttttgatgaagtaaaagc 40725033  T
Q  307 cttacaaaagagctttaagttgaaaaagctagatcaaacgtgatatta 354  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  40725034 cttacaaaagagctttaagttgaacaagctagatcaaacgtgatatta 40725081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 18302916 - 18302861
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18302916 caaagattaacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 18302861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 1900888 - 1900831
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1900888 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacaga 1900831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 5208152 - 5208095
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5208152 caaagattgacgattcaaatcaattaatggtttgatatccaaaaatcgcgagcacaga 5208095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 44075069 - 44075013
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  44075069 caaagattgacgattcaaatcaattaatggtttgatatccaaaaatcgcgagcacag 44075013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 1886787 - 1886732
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  1886787 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 1886732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 5199035 - 5198980
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  5199035 caaagattgacgattcaaatcaattaatggtttgatatccaaaaatcgcgagcaca 5198980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 13478123 - 13478068
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  13478123 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 13478068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 17739238 - 17739183
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  17739238 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 17739183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 24185982 - 24185927
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  24185982 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 24185927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 568219 - 568162
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  568219 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcacaga 568162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 2549255 - 2549312
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  2549255 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcacaga 2549312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 13491935 - 13491878
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  13491935 caaagattgacgattcaaatcaattaattgtttgatatccgaaaatcacgagcacaga 13491878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 13833058 - 13833115
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||    
T  13833058 caaagattgacgatttaaatcaattaatggtttgatatccgaaaatcacgagcacaga 13833115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 558309 - 558254
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  558309 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 558254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 2563141 - 2563196
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  2563141 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 2563196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 4940146 - 4940091
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||    
T  4940146 caaagattgacgattcaaatcaattaatggcttgatatccgaaaatcacgagcaca 4940091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 16545758 - 16545813
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  16545758 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 16545813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 16619904 - 16619849
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  16619904 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 16619849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 40724842 - 40724893
Alignment:
Q  64 gatgagtaagtccaactttgtgttgcttttacaagccatatggtttaacaat 115  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  40724842 gatgactaagtccaactttgtgttgcttttacaagccatctggtttaacaat 40724893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 349 - 400
Target Start/End: Original strand, 40725115 - 40725166
Alignment:
Q  349 atattaatcactttgattgcacaaataaataacccatttaaaatccttttta 400  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  40725115 atatcaatcactttgattgcacaaataaataacccatttgaaatccttttta 40725166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 4661735 - 4661689
Alignment:
Q  17 acgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  4661735 acgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 4661689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 10449638 - 10449694
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||| |||||||||    
T  10449638 caaagattgacgattcaaatcaattaatggtttgatattcgaaaatcgcgagcacag 10449694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 13841088 - 13841143
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||| |||||||||||||||||||||||  |||||||||||||||    
T  13841088 caaagattgacgatttaaatcaattaatggtttgatatctgaaaatcacgagcaca 13841143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 16889604 - 16889549
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||  ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  16889604 caaagatcgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 16889549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 17514203 - 17514148
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||| ||||||||||||||| |||||| ||||||||    
T  17514203 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatcgcgagcaca 17514148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 17539011 - 17539066
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||| ||||||||||||||| |||||| ||||||||    
T  17539011 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatcgcgagcaca 17539066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 36476629 - 36476574
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| | ||||||||||||||||||||||||||||  |||||||||||||||    
T  36476629 caaagattgaagattcaaatcaattaatggtttgatatctgaaaatcacgagcaca 36476574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 16909692 - 16909646
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||    
T  16909692 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatc 16909646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 38255731 - 38255777
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||    
T  38255731 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatc 38255777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 38263306 - 38263352
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||    
T  38263306 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatc 38263352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 27975265 - 27975208
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    ||||| || |||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  27975265 caaaggttgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcacaga 27975208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 16120549 - 16120490
Alignment:
Q  8 caaagattaacgattcaaatcaattaa--tggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||  ||||||||||||| |||||| ||||||||||    
T  16120549 caaagattgacgattcaaatcaattaaaatggtttgatatccgaaaatcgcgagcacaga 16120490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 16147289 - 16147230
Alignment:
Q  8 caaagattaacgattcaaatcaattaa--tggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||  ||||||||||||| |||||| ||||||||||    
T  16147289 caaagattgacgattcaaatcaattaaaatggtttgatatccgaaaatcgcgagcacaga 16147230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 27965812 - 27965757
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    ||||| || |||||||||||||||||||||||||| |||| |||||| ||||||||    
T  27965812 caaaggttgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 27965757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 29097036 - 29097091
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||||||||||||||||||| |||| ||||||  |||||||    
T  29097036 caaagattgacgattcaaatcaattaatggtttgacatccgaaaatcgtgagcaca 29097091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 48498566 - 48498511
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||||||||||||||||||| |||| |||||| ||| ||||    
T  48498566 caaagattgacgattcaaatcaattaatggtttgacatccgaaaatcgcgaacaca 48498511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 15185847 - 15185905
Alignment:
Q  8 caaagattaacgattcaaatcaatt-aatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| |||||||||||||||| |||||||||| |||| |||||| ||||||||||    
T  15185847 caaagattgacgattcaaatcaattaaatggtttgacatccgaaaatcgcgagcacaga 15185905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 15200467 - 15200525
Alignment:
Q  8 caaagattaacgattcaaatcaatt-aatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| |||||||||||||||| |||||||||| |||| |||||| ||||||||||    
T  15200467 caaagattgacgattcaaatcaattaaatggtttgacatccgaaaatcgcgagcacaga 15200525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 16228062 - 16228108
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  16228062 caaagatttacgattcaaatcaatcaatggtttgatatccgaaaatc 16228108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 29023724 - 29023770
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  29023724 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 29023770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 40680271 - 40680317
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  40680271 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 40680317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 16244941 - 16244986
Alignment:
Q  9 aaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    ||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  16244941 aaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 16244986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 29082277 - 29082334
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| |||||||||||||||||||||||||| |||  ||||||  |||||||||    
T  29082277 caaagattgacgattcaaatcaattaatggtttgacatctgaaaatcgtgagcacaga 29082334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 43600896 - 43600939
Alignment:
Q  10 aagattaacgattcaaatcaattaatggtttgatatccaaaaat 53  Q
    |||||| | ||||||||||||||||||||||||||||| |||||    
T  43600896 aagattgaagattcaaatcaattaatggtttgatatccgaaaat 43600939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 17211592 - 17211638
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| |||||| ||| |||||||||||||||||||| ||||||    
T  17211592 caaagattgacgatttaaaccaattaatggtttgatatccgaaaatc 17211638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 4e-23; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 13828101 - 13828156
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13828101 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 13828156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 33300430 - 33300486
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33300430 caaagattaacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacag 33300486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 210 - 320
Target Start/End: Complemental strand, 11926423 - 11926315
Alignment:
Q  210 ctaatgtaaaatggcttggagcaagataataacgcaatgaatatggtagcttaatgttggagatgaaaagaagactgagttttgatgaagtaaaagcctt 309  Q
    |||||||  ||| |||||||||||||| |||  |||||||| |||||||||||||||||||||  ||||||||||| ||||||||  |||||||||||||    
T  11926423 ctaatgttcaatagcttggagcaagatgata--gcaatgaacatggtagcttaatgttggagacaaaaagaagactaagttttgagcaagtaaaagcctt 11926326  T
Q  310 acaaaagagct 320  Q
    | || ||||||    
T  11926325 ataacagagct 11926315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 30823036 - 30822981
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  30823036 caaagattaacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 30822981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 25714057 - 25714111
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcac 62  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  25714057 caaagattaacgattcaaatcaattaatggtttgatatccgaaaatcacgagcac 25714111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 25699903 - 25699960
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  25699903 caaagattaaagattcaaatcaattaatggtttgatatccgaaaatcacgagcacaga 25699960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 27537721 - 27537778
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27537721 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacaga 27537778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 28304536 - 28304593
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28304536 caaagattgacgattcaaatcaattaatggtttgatatccaaaaatcgcgagcacaga 28304593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 5008249 - 5008304
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  5008249 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 5008304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 5486978 - 5486923
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  5486978 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 5486923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 8719712 - 8719657
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  8719712 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 8719657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 13492337 - 13492392
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  13492337 caaagattgacgattcaaatcaattaatggtttgatattcaaaaatcacgagcaca 13492392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 15389269 - 15389214
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  15389269 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 15389214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 19826432 - 19826377
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  19826432 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 19826377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 27551930 - 27551985
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  27551930 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 27551985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 35090193 - 35090139
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcac 62  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  35090193 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcac 35090139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 18219993 - 18219936
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  18219993 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcacaga 18219936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 16635720 - 16635776
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||    
T  16635720 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcacag 16635776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 23927897 - 23927953
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacag 64  Q
    |||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  23927897 caaaaattaacgattcaaatcaattaatgatttgatatccgaaaatcacgagcacag 23927953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 24920780 - 24920836
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||    
T  24920780 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcacag 24920836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 25552722 - 25552774
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagc 60  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  25552722 caaagattaacgattcaaatcaattaatagtttgatatccgaaaatcacgagc 25552774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 5996964 - 5997019
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||    
T  5996964 caaagattgacgattcaaatcaattaatggcttgatatccgaaaatcacgagcaca 5997019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 14475896 - 14475951
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||| |||||||||||||||||||||| |||||||||||||||    
T  14475896 caaagattgacgattcagatcaattaatggtttgatatccgaaaatcacgagcaca 14475951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 16302825 - 16302770
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  16302825 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 16302770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 16589322 - 16589377
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  16589322 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 16589377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 16606058 - 16606003
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  16606058 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 16606003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 16645677 - 16645732
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  16645677 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 16645732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 18204994 - 18204939
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  18204994 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 18204939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 20530553 - 20530498
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  20530553 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcaagagcaca 20530498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 21708425 - 21708370
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  21708425 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 21708370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 25993888 - 25993943
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  25993888 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcaagagcaca 25993943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 27960582 - 27960637
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  27960582 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 27960637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 18112234 - 18112291
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| | ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  18112234 caaagattgatgattcaaatcaattaatggtttgatatccgaaaatcgcgagcacaga 18112291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 28267648 - 28267591
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||| |||||||||||||||||| |||| |||||||||||||||||    
T  28267648 caaagattgacgattcgaatcaattaatggtttgacatccgaaaatcacgagcacaga 28267591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 28346397 - 28346340
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||| |||||||||||||||||| |||| |||||||||||||||||    
T  28346397 caaagattgacgattcgaatcaattaatggtttgacatccgaaaatcacgagcacaga 28346340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 11063978 - 11064034
Alignment:
Q  8 caaagattaacgattcaaa-tcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||    
T  11063978 caaagattgacgattcaaaatcaattaatggtttgatatccgaaaatcacgagcaca 11064034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 15141673 - 15141729
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||| ||||||||||||||||||||||||||||||  |||||| |||||||||    
T  15141673 caaagattgacgattcaaatcaattaatggtttgatatctgaaaatcgcgagcacag 15141729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 335342 - 335295
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatca 55  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  335342 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatca 335295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 12451376 - 12451321
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||||||||||||| |||||||||  |||||||||||||||    
T  12451376 caaagattgacgattcaaatcaattaatgatttgatatctgaaaatcacgagcaca 12451321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 18126779 - 18126834
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| | ||||||||||||||||||||||||||||| |||||| ||||||||    
T  18126779 caaagattgatgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 18126834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 30995382 - 30995327
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||    
T  30995382 caaagattgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 30995327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 27057346 - 27057289
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||  |||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  27057346 caaagatcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcacaga 27057289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 27047102 - 27047047
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||  |||||||||||||||||||||||||| |||| |||||| ||||||||    
T  27047102 caaagatcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 27047047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 16097852 - 16097898
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  16097852 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 16097898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 18587439 - 18587485
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  18587439 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 18587485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 21358468 - 21358422
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  21358468 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 21358422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 23962450 - 23962404
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  23962450 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 23962404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 23982560 - 23982514
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  23982560 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 23982514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 18842960 - 18843007
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatca 55  Q
    |||||||| |||||| ||| |||||||||||||||||||| |||||||    
T  18842960 caaagattgacgatttaaaccaattaatggtttgatatccgaaaatca 18843007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 24485298 - 24485252
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||  |||||||||||||||||||||||||| |||| ||||||    
T  24485298 caaagatcgacgattcaaatcaattaatggtttgacatccgaaaatc 24485252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 25654293 - 25654339
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| | ||||||||||||| ||||||||||||||| ||||||    
T  25654293 caaagattgatgattcaaatcaatcaatggtttgatatccgaaaatc 25654339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 7e-22; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 8101596 - 8101539
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8101596 caaagattaacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacaga 8101539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 8092791 - 8092736
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8092791 caaagattaacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 8092736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 12998880 - 12998935
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12998880 caaagattaacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 12998935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 27341567 - 27341509
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacagat 66  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27341567 caaagatggacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacagat 27341509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 20865714 - 20865658
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20865714 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacag 20865658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 773498 - 773553
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  773498 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 773553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 12425271 - 12425216
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  12425271 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 12425216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 25652504 - 25652449
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  25652504 caaagattaacgattaaaatcaattaatggtttgatatccgaaaatcacgagcaca 25652449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 26034016 - 26033961
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  26034016 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 26033961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 52298039 - 52298094
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  52298039 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 52298094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 55584215 - 55584160
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  55584215 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 55584160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 21530160 - 21530103
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21530160 caaagatcgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacaga 21530103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 4522269 - 4522214
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||    
T  4522269 caaagattgacgattcaaatcaattaatggcttgatatccgaaaatcacgagcaca 4522214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 10640695 - 10640750
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  10640695 caaagattgacgattcaaatcaattaatggttggatatccgaaaatcacgagcaca 10640750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 18010387 - 18010442
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  18010387 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 18010442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 1889514 - 1889457
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||  ||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  1889514 caaagatcgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcacaga 1889457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 10786969 - 10787026
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  10786969 caaagattgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcacaga 10787026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 1875399 - 1875344
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||  ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  1875399 caaagatcgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 1875344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 21398874 - 21398827
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatca 55  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  21398874 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatca 21398827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 21810920 - 21810865
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||    
T  21810920 caaagattgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 21810865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 4747456 - 4747401
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||  |||||||||||||||||||||||||| |||| |||||| ||||||||    
T  4747456 caaagatcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 4747401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 14718551 - 14718505
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  14718551 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 14718505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 14736836 - 14736790
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  14736836 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 14736790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 19644917 - 19644871
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  19644917 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 19644871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 26210436 - 26210390
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  26210436 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 26210390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 26219196 - 26219150
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  26219196 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 26219150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 19760136 - 19760183
Alignment:
Q  8 caaagattaacgattcaaatcaatt-aatggtttgatatccaaaaatc 54  Q
    |||||||| |||||||||||||||| ||||||||||||||| ||||||    
T  19760136 caaagattgacgattcaaatcaattaaatggtttgatatccgaaaatc 19760183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 19774892 - 19774939
Alignment:
Q  8 caaagattaacgattcaaatcaatt-aatggtttgatatccaaaaatc 54  Q
    |||||||| |||||||||||||||| ||||||||||||||| ||||||    
T  19774892 caaagattgacgattcaaatcaattaaatggtttgatatccgaaaatc 19774939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 25247209 - 25247163
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| |||||||| |||||| ||||||    
T  25247209 caaagattgacgattcaaatcaatcaatggtttaatatccgaaaatc 25247163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 34843008 - 34843054
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| |||||||| |||||| ||||||    
T  34843008 caaagattgacgattcaaatcaatcaatggtttaatatccgaaaatc 34843054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 30231 - 30287
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30231 caaagattaacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacag 30287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 11532 - 11586
Alignment:
Q  11 agattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11532 agattaacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacaga 11586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 3e-21; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 26717555 - 26717499
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  26717555 caaagattaacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacag 26717499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 19655618 - 19655563
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19655618 caaagattgacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 19655563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 41232370 - 41232315
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  41232370 caaagatttacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 41232315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 15951553 - 15951496
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15951553 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacaga 15951496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 25493419 - 25493476
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25493419 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacaga 25493476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 26731688 - 26731631
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26731688 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacaga 26731631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 35140176 - 35140233
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  35140176 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacaga 35140233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 42573055 - 42572998
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  42573055 caaagattaacgattcatatcaattaatggtttgatatccgaaaatcacgagcacaga 42572998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 35148517 - 35148573
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  35148517 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacag 35148573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 6856012 - 6855957
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  6856012 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 6855957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 15943043 - 15942988
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  15943043 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 15942988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 20921034 - 20921089
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  20921034 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 20921089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 25496152 - 25496207
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  25496152 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 25496207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 26896583 - 26896528
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  26896583 caaagattgacgattcaaatcaattaatggtttgacatccaaaaatcacgagcaca 26896528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 28481545 - 28481600
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  28481545 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 28481600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 38154054 - 38153999
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  38154054 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 38153999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 38611470 - 38611415
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  38611470 caaagattaacgattcaaatcaattaatgatttgatatccgaaaatcacgagcaca 38611415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 42564431 - 42564376
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  42564431 caaagattaacgattcatatcaattaatggtttgatatccgaaaatcacgagcaca 42564376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 44375358 - 44375413
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  44375358 caaagattgacgattcaaatcaattaatggtttgatatccaaaaatcgcgagcaca 44375413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 44390939 - 44390994
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  44390939 caaagattgacgattcaaatcaattaatggtttgatatccaaaaatcgcgagcaca 44390994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 21111558 - 21111615
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  21111558 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcaagagcacaga 21111615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 34541875 - 34541818
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34541875 caaagatcgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacaga 34541818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 42386322 - 42386379
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  42386322 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcacaga 42386379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 42401206 - 42401263
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  42401206 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcacaga 42401263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 17684990 - 17684935
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||| |||||||||||||||||||||||| |||||||||||||||    
T  17684990 caaagattgacgatttaaatcaattaatggtttgatatccgaaaatcacgagcaca 17684935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 20364584 - 20364529
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||| |||||||||||||||||||||| |||||||||||||||    
T  20364584 caaagattgacgattcagatcaattaatggtttgatatccgaaaatcacgagcaca 20364529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 29855545 - 29855600
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  29855545 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 29855600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 34068729 - 34068674
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||||||||||||    
T  34068729 caaagattgacgattcaaatcaattaatggtttgatattcgaaaatcacgagcaca 34068674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 34527901 - 34527846
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||  ||||||||||||||||||||||||||||||| |||||||||||||||    
T  34527901 caaagatcgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 34527846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 14630606 - 14630662
Alignment:
Q  8 caaagattaacgattcaaa-tcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||    
T  14630606 caaagattgacgattcaaaatcaattaatggtttgatatccgaaaatcacgagcaca 14630662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 24293747 - 24293803
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||| |||||| ||||||||||||||||||| |||| ||||||||||||||||    
T  24293747 caaagattgacgatttaaatcaattaatggtttgagatccgaaaatcacgagcacag 24293803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 35304898 - 35304954
Alignment:
Q  8 caaagattaacgattcaaa-tcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||    
T  35304898 caaagattgacgattcaaaatcaattaatggtttgatatccgaaaatcacgagcaca 35304954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 10681379 - 10681324
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||    
T  10681379 caaagattgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 10681324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 11622096 - 11622049
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatca 55  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  11622096 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatca 11622049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 15600936 - 15600991
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||    
T  15600936 caaagattgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 15600991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 21151634 - 21151689
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||||||||||||||| |||||||| |||||| ||||||||    
T  21151634 caaagattgacgattcaaatcaattaatggtgtgatatccgaaaatcgcgagcaca 21151689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 34437292 - 34437347
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||    
T  34437292 caaagattgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 34437347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 35040258 - 35040313
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||| ||||||||||||||| ||||||||||| |||||||||||||||    
T  35040258 caaagattgacggttcaaatcaattaattgtttgatatccgaaaatcacgagcaca 35040313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 33306610 - 33306564
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  33306610 caaagattgacgattcaaatcaattaatggtttgacatccaaaaatc 33306564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 24287178 - 24287231
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagca 61  Q
    |||||||| |||||| ||||||||||||||||||| |||| |||||||||||||    
T  24287178 caaagattgacgatttaaatcaattaatggtttgagatccgaaaatcacgagca 24287231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 34708325 - 34708381
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||  |||||||||||||||||||||||||| |||| |||||| |||||||||    
T  34708325 caaagatcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcacag 34708381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 42247529 - 42247477
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagc 60  Q
    |||||||| | ||||||||||||||||||||||||||||| ||||||| ||||    
T  42247529 caaagattgaagattcaaatcaattaatggtttgatatccgaaaatcaggagc 42247477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 2653234 - 2653289
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||  |||||||||||||||||||||||||| |||| |||||| ||||||||    
T  2653234 caaagatcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 2653289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 3754940 - 3754885
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||  |||||||||||||||||||||||||| |||| |||||| ||||||||    
T  3754940 caaagatcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 3754885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 16284153 - 16284208
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||||||||||||||||||| |||| ||||||  |||||||    
T  16284153 caaagattgacgattcaaatcaattaatggtttgacatccgaaaatcgtgagcaca 16284208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 30683160 - 30683105
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||  |||||||||||||||||||||||||| |||| |||||| ||||||||    
T  30683160 caaagatcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 30683105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 31354766 - 31354719
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatca 55  Q
    |||||||| |||||||||||||||||||||||||| |||| |||||||    
T  31354766 caaagattgacgattcaaatcaattaatggtttgacatccgaaaatca 31354719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 22187539 - 22187585
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  22187539 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 22187585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 27680978 - 27680932
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  27680978 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 27680932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 3764991 - 3764934
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||  |||||||||||||||||||||||| | |||| |||||| ||||||||||    
T  3764991 caaagatcgacgattcaaatcaattaatggtttaacatccgaaaatcgcgagcacaga 3764934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 16274977 - 16275034
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| |||||||||||||||||||| ||||| |||| ||||||  |||||||||    
T  16274977 caaagattgacgattcaaatcaattaatgatttgacatccgaaaatcgtgagcacaga 16275034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 21320675 - 21320618
Alignment:
Q  8 caaagattaacgattcaaa-tcaattaa-tggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||| |||||||| ||||||||||||| |||||||||||||||    
T  21320675 caaagattgacgattcaaaatcaattaaatggtttgatatccgaaaatcacgagcaca 21320618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 21858612 - 21858555
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||  |||||||||||||| ||||||||||| |||| |||||| ||||||||||    
T  21858612 caaagatcgacgattcaaatcaaataatggtttgacatccgaaaatcgcgagcacaga 21858555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 23284014 - 23283970
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaa 52  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||    
T  23284014 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaa 23283970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 21850177 - 21850122
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||  |||||||||||||| ||||||||||| |||| |||||| ||||||||    
T  21850177 caaagatcgacgattcaaatcaaataatggtttgacatccgaaaatcgcgagcaca 21850122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 30524573 - 30524527
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| |||||| |||||||| ||||||    
T  30524573 caaagattgacgattcaaatcaatcaatggtctgatatccgaaaatc 30524527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 42245752 - 42245798
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| |||||||||||||||  |||||||||||||| ||||||    
T  42245752 caaagattgacgattcaaatcaatcgatggtttgatatccgaaaatc 42245798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 34685903 - 34685960
Alignment:
Q  8 caaagattaacgattcaaatcaatt-aatggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||  |||||||||||||||| |||||||||| |||| |||||| |||||||||    
T  34685903 caaagatcgacgattcaaatcaattaaatggtttgacatccgaaaatcgcgagcacag 34685960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 13690 - 13635
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13690 caaagattaacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 13635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 10727 - 10782
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10727 caaagattaacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 10782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 1e-20; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 25796882 - 25796937
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25796882 caaagattaacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 25796937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 22103479 - 22103422
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22103479 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacaga 22103422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 39844107 - 39844050
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  39844107 caaagattaacgattcatatcaattaatggtttgatatccgaaaatcacgagcacaga 39844050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 17529380 - 17529436
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17529380 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacag 17529436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 25584906 - 25584850
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25584906 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacag 25584850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 30939837 - 30939893
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30939837 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacag 30939893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 31000660 - 31000604
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  31000660 caaagattgacgattcaaatcaattaatggtttgatatccaaaaatcgcgagcacag 31000604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 1388147 - 1388092
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  1388147 caaagattaacgattcatatcaattaatggtttgatatccgaaaatcacgagcaca 1388092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 4837417 - 4837362
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  4837417 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 4837362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 4842862 - 4842807
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  4842862 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 4842807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 39836065 - 39836010
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  39836065 caaagattaacgattcatatcaattaatggtttgatatccgaaaatcacgagcaca 39836010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 14204846 - 14204903
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  14204846 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcacaga 14204903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 17975988 - 17976044
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  17975988 caaagattgacgattcaaatcaattaatggtttgttatccgaaaatcacgagcacag 17976044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 14219487 - 14219542
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  14219487 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 14219542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 26871267 - 26871212
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||| |||||||||||||||||||||||| |||||||||||||||    
T  26871267 caaagattgacgatttaaatcaattaatggtttgatatccgaaaatcacgagcaca 26871212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 36249057 - 36249112
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||||||||||||    
T  36249057 caaagattgacgattcaaatcaattaatggtttgatattcgaaaatcacgagcaca 36249112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 36576598 - 36576543
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  36576598 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 36576543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 15832260 - 15832317
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| |||||||||||||||||||||||||||| || |||||| ||||||||||    
T  15832260 caaagattgacgattcaaatcaattaatggtttgataaccgaaaatcgcgagcacaga 15832317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 16761149 - 16761206
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||  ||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  16761149 caaagatcgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcacaga 16761206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 14335799 - 14335743
Alignment:
Q  8 caaagattaacgattcaaa-tcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||    
T  14335799 caaagattgacgattcaaaatcaattaatggtttgatatccgaaaatcacgagcaca 14335743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 17662322 - 17662266
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||| ||||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  17662322 caaagattgacgattcaaatcagttaatggcttgatatccgaaaatcacgagcacag 17662266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 6582729 - 6582682
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatca 55  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  6582729 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatca 6582682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 16775586 - 16775641
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||  ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  16775586 caaagatcgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 16775641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 17129630 - 17129677
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatca 55  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  17129630 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatca 17129677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 19851130 - 19851177
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatca 55  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  19851130 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatca 19851177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 19857166 - 19857213
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatca 55  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  19857166 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatca 19857213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 23922910 - 23922855
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||  ||||||| |||||||    
T  23922910 caaagattgacgattcaaatcaattaatggtttgatatctgaaaatcatgagcaca 23922855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 25719363 - 25719418
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| | ||||||||||||||||||||||||||| | |||||||||||||||    
T  25719363 caaagattgatgattcaaatcaattaatggtttgatattcgaaaatcacgagcaca 25719418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 36252351 - 36252300
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgag 59  Q
    |||||||| |||||||||||||||||||||||| |||||| |||||||||||    
T  36252351 caaagattgacgattcaaatcaattaatggtttaatatccgaaaatcacgag 36252300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 17681451 - 17681394
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||| ||||||| ||||||| | |||||||||||||||||    
T  17681451 caaagattgacgattcaaatcagttaatggcttgatattcgaaaatcacgagcacaga 17681394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 23600915 - 23600859
Alignment:
Q  8 caaagattaacgattcaaa-tcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||| |||||||||||||||| |||| |||||||||||||||    
T  23600915 caaagattgacgattcaaaatcaattaatggtttgacatccgaaaatcacgagcaca 23600859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 4583926 - 4583972
Alignment:
Q  17 acgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||| ||||||||||||||||||||||||  ||||||||||||||    
T  4583926 acgatttaaatcaattaatggtttgatatccggaaatcacgagcaca 4583972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 22418463 - 22418509
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  22418463 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 22418509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 31207551 - 31207505
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  31207551 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 31207505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 16190442 - 16190398
Alignment:
Q  10 aagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||| ||||||||||||||| ||||||||||||||| ||||||    
T  16190442 aagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 16190398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 22366779 - 22366732
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatca 55  Q
    |||||||| ||||||||||||||||||||| |||| |||| |||||||    
T  22366779 caaagattgacgattcaaatcaattaatgggttgacatccgaaaatca 22366732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 23093056 - 23093102
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||| ||| ||||||||||||||| ||||||||||||||| ||||||    
T  23093056 caaaaattgacgattcaaatcaatcaatggtttgatatccgaaaatc 23093102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 29624 - 29567
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  29624 caaagattaacgattcatatcaattaatggtttgatatccgaaaatcacgagcacaga 29567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 80393 - 80336
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  80393 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacaga 80336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 63993 - 63938
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  63993 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 63938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 49; Significance: 6e-19; HSPs: 3)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 195063 - 195119
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacag 64  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  195063 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcacag 195119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 188876 - 188931
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||||||||||| |||||||||||| |||||||||||||||    
T  188876 caaagattgacgattcaaatcaattaacggtttgatatccgaaaatcacgagcaca 188931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 159406 - 159462
Alignment:
Q  8 caaagattaacgattcaaatcaatt-aatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||  |||||||||||||| | ||||||||||||||| |||||| ||||||||    
T  159406 caaagatcgacgattcaaatcaaatcaatggtttgatatccgaaaatcgcgagcaca 159462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 4704 - 4759
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  4704 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 4759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0392 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0392
Description:

Target: scaffold0392; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 16450 - 16395
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  16450 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 16395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 9857 - 9802
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  9857 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 9802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 10003 - 9945
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacagat 66  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  10003 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcacagat 9945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 109700 - 109754
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcac 62  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  109700 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcac 109754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1804 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold1804
Description:

Target: scaffold1804; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 304 - 359
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||||||||||||||||||||||| |||||| |||||||||||||||    
T  304 caaagattgacgattcaaatcaattaatggtttaatatccgaaaatcacgagcaca 359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 9911 - 9966
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  9911 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcaggagcaca 9966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 10490 - 10545
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||  ||||||||||||||||||||||||||||||| |||||||||||||||    
T  10490 caaagatcgacgattcaaatcaattaatggtttgatatccgaaaatcacgagcaca 10545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 21984 - 21929
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  21984 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 21929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 29830 - 29775
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  29830 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 29775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 32697 - 32640
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||| ||||||||||||||| |||||| ||||||||||    
T  32697 caaagattgacgattcaaatcaataaatggtttgatatccgaaaatcgcgagcacaga 32640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 401 - 346
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||||||||||||    
T  401 caaagattgacgattcaaatcaattaatggtttgatattcgaaaatcacgagcaca 346  T

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Target: scaffold0019 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 172676 - 172731
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  172676 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatcgcgagcaca 172731  T

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Target: scaffold0155 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 21506 - 21449
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||    
T  21506 caaagattgacgattcaaatcaattaatggtttgatatctgaaaatcaagagcacaga 21449  T

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Target: scaffold0023 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 136376 - 136319
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||| |||| |||||||||||||||||||||||||  |||||||||||||||||    
T  136376 caaagattgacgactcaaatcaattaatggtttgatatctgaaaatcacgagcacaga 136319  T

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Target: scaffold0023; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 145338 - 145283
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  145338 caaagattgacgactcaaatcaattaatggtttgatatccgaaaatcatgagcaca 145283  T

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Target: scaffold0671 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 8479 - 8432
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatca 55  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  8479 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatca 8432  T

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Target: scaffold0561 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 19 - 74
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||| ||||||||||||||| |||||| ||||||||    
T  19 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatcgcgagcaca 74  T

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Target: scaffold0357 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 4573 - 4628
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| |||| |||||||||||||||||||||||||| || ||||||||||||    
T  4573 caaagattgacgactcaaatcaattaatggtttgatatccgaatatcacgagcaca 4628  T

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Target: scaffold0043 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 63534 - 63581
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatca 55  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  63534 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatca 63581  T

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Target: scaffold1199 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold1199
Description:

Target: scaffold1199; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 2265 - 2207
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacagat 66  Q
    |||||||| |||||||||||||||||||||||||| |||| ||||||  ||||||||||    
T  2265 caaagattgacgattcaaatcaattaatggtttgacatccgaaaatcgtgagcacagat 2207  T

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Target: scaffold0605 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 7790 - 7744
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||    
T  7790 caaagattgacgattcaaatcaattaatggtttgatatccgaaaatc 7744  T

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Target: scaffold0455 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 3626 - 3579
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatca 55  Q
    |||||||| |||||| |||||||||||||||||||||||| |||||||    
T  3626 caaagattgacgatttaaatcaattaatggtttgatatccgaaaatca 3579  T

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Target: scaffold0451 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 4844 - 4899
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||  |||||||||||||||||||||||||| |||| |||||| ||||||||    
T  4844 caaagatcgacgattcaaatcaattaatggtttgacatccgaaaatcgcgagcaca 4899  T

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Target: scaffold0386 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 19 - 74
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcaca 63  Q
    |||||||| ||||||||||||||| ||||||| ||||||| |||||| ||||||||    
T  19 caaagattgacgattcaaatcaataaatggttggatatccgaaaatcgcgagcaca 74  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0945 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0945
Description:

Target: scaffold0945; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 134 - 180
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  134 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 15428 - 15382
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| |||||||||||||||||||||||||| |||| ||||||    
T  15428 caaagattgacgattcaaatcaattaatggtttgacatccgaaaatc 15382  T

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Target: scaffold0047 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 83737 - 83783
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  83737 caaagattgacgattcaaatcaatcaatggtttgatatccgaaaatc 83783  T

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Target: scaffold0429 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 15181 - 15238
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatcacgagcacaga 65  Q
    |||||||  |||||||||||||||||||||||||| |||| ||||||  |||||||||    
T  15181 caaagatcgacgattcaaatcaattaatggtttgacatccgaaaatcgtgagcacaga 15238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 55863 - 55910
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatca 55  Q
    |||||||| ||||||||||||||| ||| ||||||||||| |||||||    
T  55863 caaagattgacgattcaaatcaatcaattgtttgatatccgaaaatca 55910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 22763 - 22717
Alignment:
Q  8 caaagattaacgattcaaatcaattaatggtttgatatccaaaaatc 54  Q
    |||||||| |||||||||||||||  |||||||||||||| ||||||    
T  22763 caaagattgacgattcaaatcaatcgatggtttgatatccgaaaatc 22717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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