View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1699-Insertion-5 (Length: 318)
Name: NF1699-Insertion-5
Description: NF1699
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1699-Insertion-5 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 8 - 318
Target Start/End: Original strand, 45271824 - 45272134
Alignment:
| Q |
8 |
atttagacttgtgaaccaaccaagtgaatctcataagaataagatagactattttgaagtttgctataaaggcaatctggttgcattattctaaatatga |
107 |
Q |
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| T |
45271824 |
atttaggcttgtggaccaaccaagtgtatctcataagaataagatagactattttgaagtttgctataaaggcaatctggttgcattattctaaatatga |
45271923 |
T |
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| Q |
108 |
tcaaatagtattacatacatttagctaccagtatatgtggattcagaagaaattgaacccaaaaatgcctagaaattcccaaacaaagaaacacttattt |
207 |
Q |
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| T |
45271924 |
tcaaatagtattacatacatttagctaccagtatatgtggattcagaagaaattgaaccaaaaaatgcctagaaattcccaaacaaagaaacacttattt |
45272023 |
T |
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| Q |
208 |
ctaagttattatataattaatgtgtcttcaacattcgttctagcaggaactaatgtattaatcaatgatccgcaagaagttttcttctatcattgccagc |
307 |
Q |
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| T |
45272024 |
ctaagttattatataattaatgtgtcttcaacattcgttctagcagcaactaatgtattaatcaatgatccgcaagaagttttcttctatcattgccagc |
45272123 |
T |
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| Q |
308 |
gcaggccatca |
318 |
Q |
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| T |
45272124 |
gcaggccatca |
45272134 |
T |
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