View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16991_high_40 (Length: 295)
Name: NF16991_high_40
Description: NF16991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16991_high_40 |
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Alignment Details
Target: chr5 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 4143818 - 4144099
Alignment:
| Q |
1 |
cttacagagaagagagaaaatgcgaagaagttcttggtcgatctggcggagaagggaagagcatggcaccgtcaacgtagttcattacacactgtattgg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4143818 |
cttacagagaagagagaaaatgcgaagaagttcttggtcgatctggcggagaagggaagagcatggcaccgtcaacgtagttcattacacactgtattgg |
4143917 |
T |
|
| Q |
101 |
gcccgataataatgggcccatcttaatataagaggaaaagatgaggattgttatttgcacccctctaatttacttctaacgcacctgtataagaagggga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4143918 |
gcccgataataatgggcccatcttaatataagaggaaaagatgaggattgttatttgcacccctctaatttacttctaacgcacctgtataagaagggga |
4144017 |
T |
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| Q |
201 |
aaaaagctcatgggctttgagcccaagcccgcccgcaaaaaacatacctctttatacgtatgttaagatttcctttccttta |
282 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||| |||||||||||||| |
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| T |
4144018 |
aaaaagctcatgggctttgagcccaagcccacccgcaaaaaacatacctatttataggtatgttaagttttcctttccttta |
4144099 |
T |
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