View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16991_high_44 (Length: 268)

Name: NF16991_high_44
Description: NF16991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16991_high_44
NF16991_high_44
[»] chr1 (65 HSPs)
chr1 (1-263)||(50004942-50005204)
chr1 (1-129)||(38277412-38277540)
chr1 (4-131)||(34756422-34756549)
chr1 (1-128)||(15034657-15034784)
chr1 (1-126)||(4038109-4038234)
chr1 (1-88)||(32572960-32573047)
chr1 (1-88)||(40264068-40264155)
chr1 (1-124)||(28745799-28745921)
chr1 (5-123)||(45565397-45565515)
chr1 (1-126)||(44410311-44410436)
chr1 (1-128)||(27804299-27804426)
chr1 (1-88)||(37214853-37214939)
chr1 (130-260)||(4076395-4076521)
chr1 (5-94)||(5474437-5474526)
chr1 (129-259)||(26793696-26793822)
chr1 (39-126)||(6470672-6470759)
chr1 (1-88)||(23536101-23536188)
chr1 (1-126)||(15034693-15034818)
chr1 (133-260)||(19806805-19806930)
chr1 (5-128)||(23536065-23536188)
chr1 (1-88)||(27935523-27935610)
chr1 (42-132)||(8224762-8224852)
chr1 (3-128)||(4038073-4038198)
chr1 (165-263)||(9383273-9383371)
chr1 (42-128)||(26501068-26501154)
chr1 (4-53)||(25889194-25889243)
chr1 (42-131)||(28632575-28632663)
chr1 (39-128)||(31166308-31166397)
chr1 (42-126)||(24273209-24273293)
chr1 (51-131)||(27935569-27935649)
chr1 (9-88)||(17502222-17502301)
chr1 (1-56)||(30190206-30190261)
chr1 (42-117)||(37448390-37448465)
chr1 (1-118)||(28745831-28745947)
chr1 (126-228)||(30209682-30209780)
chr1 (5-117)||(32572960-32573072)
chr1 (51-126)||(30190220-30190295)
chr1 (1-124)||(34756461-34756584)
chr1 (5-124)||(40264068-40264187)
chr1 (1-88)||(45565428-45565515)
chr1 (1-124)||(50005113-50005236)
chr1 (128-235)||(4950129-4950232)
chr1 (39-88)||(15245480-15245529)
chr1 (39-132)||(43622964-43623057)
chr1 (42-126)||(47165201-47165285)
chr1 (51-118)||(27804273-27804340)
chr1 (44-123)||(37036940-37037019)
chr1 (163-242)||(49236136-49236215)
chr1 (42-108)||(37447891-37447957)
chr1 (153-246)||(42472056-42472149)
chr1 (42-107)||(44570697-44570762)
chr1 (47-131)||(29446745-29446828)
chr1 (5-84)||(17502222-17502301)
chr1 (1-108)||(38277449-38277556)
chr1 (42-129)||(49659214-49659300)
chr1 (91-129)||(17502195-17502233)
chr1 (42-108)||(31195474-31195540)
chr1 (153-255)||(32712774-32712876)
chr1 (9-55)||(47074177-47074223)
chr1 (1-42)||(6470684-6470725)
chr1 (133-227)||(12855317-12855407)
chr1 (54-127)||(32287934-32288007)
chr1 (1-33)||(37036956-37036988)
chr1 (69-129)||(44410413-44410473)
chr1 (176-240)||(49287979-49288043)
[»] chr7 (45 HSPs)
chr7 (1-128)||(29065817-29065944)
chr7 (1-129)||(5644674-5644802)
chr7 (1-128)||(40110735-40110863)
chr7 (1-102)||(21635919-21636020)
chr7 (11-94)||(46069423-46069506)
chr7 (1-126)||(2057429-2057554)
chr7 (1-94)||(49052819-49052912)
chr7 (1-129)||(34388262-34388390)
chr7 (153-255)||(23318992-23319094)
chr7 (1-129)||(43955514-43955639)
chr7 (3-94)||(44915231-44915322)
chr7 (157-255)||(39644867-39644965)
chr7 (133-263)||(41482466-41482592)
chr7 (39-129)||(31632719-31632809)
chr7 (1-88)||(40854007-40854095)
chr7 (42-129)||(35776930-35777017)
chr7 (1-131)||(40110771-40110902)
chr7 (1-128)||(49052784-49052910)
chr7 (55-129)||(2057392-2057466)
chr7 (1-124)||(43955551-43955671)
chr7 (4-129)||(44915192-44915317)
chr7 (42-126)||(18789221-18789305)
chr7 (42-126)||(26162112-26162196)
chr7 (1-126)||(29065853-29065978)
chr7 (42-126)||(6498740-6498824)
chr7 (1-129)||(46481943-46482070)
chr7 (55-126)||(34388353-34388424)
chr7 (163-246)||(39594604-39594687)
chr7 (165-261)||(2334034-2334133)
chr7 (1-126)||(5644711-5644836)
chr7 (166-263)||(24429661-24429759)
chr7 (42-128)||(25189201-25189287)
chr7 (57-126)||(34398938-34399008)
chr7 (5-130)||(40854007-40854133)
chr7 (42-100)||(43791116-43791174)
chr7 (43-99)||(18789544-18789600)
chr7 (178-246)||(41147921-41147989)
chr7 (163-255)||(45884695-45884787)
chr7 (201-252)||(44107783-44107834)
chr7 (42-128)||(29639190-29639276)
chr7 (42-88)||(32650611-32650657)
chr7 (79-128)||(29195707-29195756)
chr7 (1-42)||(46069425-46069466)
chr7 (42-102)||(22391562-22391622)
chr7 (1-37)||(43791124-43791160)
[»] chr4 (58 HSPs)
chr4 (1-132)||(10128008-10128139)
chr4 (1-126)||(15660217-15660342)
chr4 (1-108)||(42844561-42844668)
chr4 (1-88)||(26250943-26251030)
chr4 (1-126)||(1107086-1107211)
chr4 (1-99)||(857266-857364)
chr4 (4-118)||(28845879-28845993)
chr4 (1-124)||(7352814-7352937)
chr4 (1-126)||(41498489-41498615)
chr4 (9-126)||(14982280-14982396)
chr4 (29-126)||(36455907-36456004)
chr4 (5-134)||(26250901-26251030)
chr4 (1-88)||(11041001-11041088)
chr4 (1-126)||(857273-857398)
chr4 (1-130)||(7352846-7352975)
chr4 (1-66)||(49111372-49111437)
chr4 (5-125)||(4441338-4441449)
chr4 (51-129)||(4896716-4896794)
chr4 (128-255)||(45413824-45413947)
chr4 (9-55)||(46724195-46724241)
chr4 (53-126)||(11040968-11041040)
chr4 (42-126)||(2125857-2125941)
chr4 (42-126)||(31473849-31473933)
chr4 (51-126)||(49111396-49111471)
chr4 (52-130)||(1112601-1112679)
chr4 (42-120)||(1539647-1539725)
chr4 (165-255)||(33451294-33451384)
chr4 (1-126)||(28845905-28846030)
chr4 (48-129)||(36456007-36456088)
chr4 (178-263)||(36625582-36625667)
chr4 (1-129)||(15660180-15660308)
chr4 (52-128)||(41498575-41498651)
chr4 (153-255)||(42964500-42964602)
chr4 (55-132)||(5715738-5715815)
chr4 (42-123)||(10633035-10633116)
chr4 (42-99)||(29091164-29091221)
chr4 (130-255)||(19181467-19181588)
chr4 (4-130)||(1107047-1107174)
chr4 (126-255)||(34666341-34666470)
chr4 (69-131)||(4896643-4896705)
chr4 (1-35)||(4896682-4896716)
chr4 (2-36)||(31742811-31742845)
chr4 (201-255)||(55945706-55945760)
chr4 (49-102)||(1112704-1112757)
chr4 (194-255)||(2183295-2183356)
chr4 (57-126)||(11348327-11348396)
chr4 (42-94)||(26534525-26534577)
chr4 (29-88)||(12914060-12914119)
chr4 (43-94)||(16300209-16300260)
chr4 (42-93)||(41139506-41139557)
chr4 (42-124)||(19461725-19461807)
chr4 (13-55)||(32724961-32725003)
chr4 (42-88)||(42775643-42775689)
chr4 (1-42)||(4896716-4896757)
chr4 (78-127)||(31742875-31742924)
chr4 (201-246)||(43481367-43481412)
chr4 (1-37)||(1539675-1539711)
chr4 (42-126)||(16516171-16516255)
[»] chr3 (54 HSPs)
chr3 (1-108)||(31070424-31070531)
chr3 (1-130)||(44436254-44436383)
chr3 (1-126)||(44692822-44692947)
chr3 (1-128)||(9129342-9129469)
chr3 (1-128)||(9137449-9137576)
chr3 (1-88)||(46429434-46429521)
chr3 (1-84)||(47284268-47284351)
chr3 (1-126)||(5415817-5415942)
chr3 (1-88)||(28092248-28092335)
chr3 (3-132)||(44692858-44692987)
chr3 (1-128)||(9129378-9129505)
chr3 (1-128)||(9137485-9137612)
chr3 (1-88)||(27251932-27252019)
chr3 (1-94)||(42130726-42130819)
chr3 (5-88)||(332012-332096)
chr3 (4-76)||(39215888-39215960)
chr3 (50-126)||(46672799-46672875)
chr3 (46-130)||(49457339-49457423)
chr3 (51-130)||(27251978-27252057)
chr3 (42-128)||(7302344-7302430)
chr3 (163-255)||(32490872-32490964)
chr3 (1-93)||(44436292-44436384)
chr3 (5-88)||(25655335-25655418)
chr3 (5-132)||(46429434-46429561)
chr3 (42-129)||(53129831-53129918)
chr3 (1-107)||(31070440-31070546)
chr3 (5-118)||(28092222-28092335)
chr3 (55-127)||(5415782-5415854)
chr3 (42-118)||(21307520-21307596)
chr3 (51-126)||(39110394-39110469)
chr3 (157-255)||(48936355-48936451)
chr3 (1-58)||(39110428-39110485)
chr3 (42-131)||(42005941-42006030)
chr3 (42-118)||(19475824-19475900)
chr3 (42-126)||(47767432-47767516)
chr3 (51-126)||(37321550-37321625)
chr3 (153-240)||(45818671-45818758)
chr3 (70-129)||(46001361-46001420)
chr3 (42-108)||(30766571-30766637)
chr3 (178-247)||(32794945-32795014)
chr3 (165-218)||(39795330-39795383)
chr3 (69-126)||(47284328-47284385)
chr3 (42-126)||(31189385-31189469)
chr3 (42-126)||(37054394-37054478)
chr3 (29-129)||(40929605-40929704)
chr3 (1-76)||(46672772-46672841)
chr3 (72-130)||(35279920-35279978)
chr3 (157-255)||(40416911-40417009)
chr3 (51-88)||(332012-332049)
chr3 (42-107)||(7976567-7976632)
chr3 (42-99)||(8762153-8762210)
chr3 (1-42)||(21307529-21307570)
chr3 (39-88)||(38506861-38506910)
chr3 (158-186)||(44764176-44764204)
[»] chr2 (50 HSPs)
chr2 (9-128)||(27033488-27033607)
chr2 (1-126)||(41461549-41461674)
chr2 (1-126)||(784827-784952)
chr2 (1-126)||(14365734-14365858)
chr2 (157-263)||(40626432-40626538)
chr2 (1-88)||(14537233-14537320)
chr2 (128-263)||(18665098-18665229)
chr2 (5-126)||(10244177-10244298)
chr2 (1-118)||(11716442-11716550)
chr2 (5-129)||(11684596-11684711)
chr2 (5-88)||(11824718-11824801)
chr2 (5-127)||(14537198-14537320)
chr2 (51-128)||(14365698-14365775)
chr2 (5-88)||(3345783-3345867)
chr2 (159-215)||(18881821-18881877)
chr2 (49-128)||(17180295-17180374)
chr2 (42-124)||(11532242-11532324)
chr2 (42-124)||(11793897-11793979)
chr2 (1-129)||(41461512-41461640)
chr2 (42-129)||(10480116-10480203)
chr2 (51-126)||(11716408-11716483)
chr2 (1-52)||(44256181-44256232)
chr2 (1-129)||(784790-784918)
chr2 (43-93)||(14954343-14954393)
chr2 (51-129)||(17905651-17905729)
chr2 (39-108)||(40026082-40026151)
chr2 (42-126)||(13017779-13017863)
chr2 (42-126)||(45094460-45094544)
chr2 (163-234)||(6457567-6457638)
chr2 (165-255)||(40054517-40054607)
chr2 (42-99)||(32839637-32839694)
chr2 (42-118)||(30698289-30698365)
chr2 (39-102)||(740728-740791)
chr2 (3-42)||(11595355-11595394)
chr2 (43-90)||(11607257-11607304)
chr2 (201-252)||(16567767-16567818)
chr2 (43-102)||(28740620-28740679)
chr2 (157-228)||(38490532-38490603)
chr2 (42-100)||(7167656-7167714)
chr2 (42-128)||(7228001-7228087)
chr2 (42-88)||(8736430-8736476)
chr2 (42-128)||(39630223-39630308)
chr2 (202-235)||(3045708-3045741)
chr2 (202-255)||(7670385-7670438)
chr2 (1-42)||(11532251-11532292)
chr2 (51-88)||(11684674-11684711)
chr2 (1-34)||(17180331-17180364)
chr2 (1-42)||(27033524-27033565)
chr2 (72-125)||(30751365-30751418)
chr2 (42-86)||(44255674-44255718)
[»] chr8 (44 HSPs)
chr8 (1-126)||(3853616-3853741)
chr8 (1-126)||(3858074-3858199)
chr8 (1-108)||(13404861-13404968)
chr8 (1-133)||(17110903-17111035)
chr8 (9-88)||(42739969-42740048)
chr8 (5-126)||(14799999-14800119)
chr8 (7-126)||(33902667-33902786)
chr8 (28-124)||(4156228-4156324)
chr8 (1-129)||(17110866-17110994)
chr8 (1-132)||(40046798-40046915)
chr8 (5-94)||(38573433-38573522)
chr8 (42-126)||(24044960-24045044)
chr8 (41-128)||(11744717-11744804)
chr8 (1-47)||(37268086-37268132)
chr8 (51-128)||(42711364-42711441)
chr8 (42-130)||(33377296-33377384)
chr8 (42-126)||(44889354-44889438)
chr8 (163-237)||(26543900-26543975)
chr8 (153-263)||(556738-556848)
chr8 (42-128)||(23011732-23011818)
chr8 (165-263)||(38503888-38503985)
chr8 (42-130)||(36103097-36103185)
chr8 (1-124)||(13404829-13404952)
chr8 (201-255)||(9028688-9028742)
chr8 (213-255)||(11066502-11066544)
chr8 (43-129)||(33986001-33986087)
chr8 (42-123)||(35979003-35979084)
chr8 (42-102)||(15186816-15186876)
chr8 (42-126)||(28324661-28324745)
chr8 (43-130)||(14235-14321)
chr8 (42-93)||(13144616-13144667)
chr8 (1-88)||(30435280-30435365)
chr8 (67-126)||(31807409-31807467)
chr8 (42-128)||(1088276-1088362)
chr8 (42-108)||(8049272-8049338)
chr8 (201-255)||(22573142-22573196)
chr8 (42-88)||(26520438-26520484)
chr8 (42-88)||(30444932-30444978)
chr8 (42-88)||(34008819-34008865)
chr8 (201-242)||(31734323-31734364)
chr8 (153-246)||(40028781-40028874)
chr8 (42-126)||(515531-515615)
chr8 (153-233)||(3346397-3346477)
chr8 (52-88)||(7202885-7202921)
[»] chr6 (21 HSPs)
chr6 (1-102)||(9763036-9763137)
chr6 (5-126)||(9285647-9285768)
chr6 (1-133)||(6919742-6919873)
chr6 (1-102)||(776114-776215)
chr6 (1-128)||(9763046-9763173)
chr6 (42-126)||(1368477-1368561)
chr6 (42-132)||(34244969-34245059)
chr6 (51-124)||(6919710-6919783)
chr6 (42-129)||(28918162-28918249)
chr6 (54-108)||(15299417-15299471)
chr6 (42-132)||(29889423-29889513)
chr6 (165-246)||(18596691-18596772)
chr6 (62-130)||(8574760-8574828)
chr6 (52-108)||(15299510-15299566)
chr6 (62-132)||(8574689-8574759)
chr6 (202-263)||(8547481-8547542)
chr6 (42-126)||(13487275-13487359)
chr6 (39-102)||(6358237-6358300)
chr6 (153-240)||(14227943-14228030)
chr6 (202-263)||(8573834-8573895)
chr6 (42-99)||(34364770-34364827)
[»] chr5 (50 HSPs)
chr5 (1-129)||(9764335-9764463)
chr5 (1-128)||(15373994-15374121)
chr5 (1-125)||(20523167-20523291)
chr5 (1-128)||(2316376-2316504)
chr5 (1-124)||(32389974-32390097)
chr5 (5-130)||(40643856-40643980)
chr5 (4-102)||(40809378-40809476)
chr5 (1-130)||(32470878-32471007)
chr5 (1-123)||(6634049-6634170)
chr5 (1-56)||(28828417-28828472)
chr5 (42-133)||(37722880-37722971)
chr5 (48-129)||(16515099-16515180)
chr5 (1-129)||(32390006-32390134)
chr5 (1-108)||(23091980-23092087)
chr5 (1-126)||(15373960-15374085)
chr5 (159-255)||(34731234-34731330)
chr5 (3-126)||(9764374-9764497)
chr5 (39-125)||(3563278-3563364)
chr5 (1-126)||(20523133-20523258)
chr5 (42-126)||(22766952-22767036)
chr5 (51-131)||(40809336-40809416)
chr5 (53-124)||(2721557-2721628)
chr5 (42-129)||(25935276-25935363)
chr5 (1-100)||(32470916-32471015)
chr5 (42-129)||(40090400-40090487)
chr5 (49-107)||(16515023-16515081)
chr5 (49-126)||(26281262-26281339)
chr5 (46-126)||(35379344-35379423)
chr5 (42-130)||(41762201-41762289)
chr5 (51-102)||(2316463-2316514)
chr5 (42-124)||(19533893-19533975)
chr5 (42-126)||(22303856-22303940)
chr5 (42-118)||(37145487-37145563)
chr5 (42-88)||(22305132-22305178)
chr5 (42-128)||(32250084-32250169)
chr5 (39-88)||(15270837-15270886)
chr5 (39-88)||(17542344-17542393)
chr5 (51-128)||(23092046-23092123)
chr5 (69-129)||(6634012-6634072)
chr5 (42-118)||(9894308-9894384)
chr5 (71-132)||(13243451-13243514)
chr5 (153-246)||(32529439-32529534)
chr5 (50-130)||(33245366-33245446)
chr5 (53-133)||(34982209-34982288)
chr5 (42-88)||(33146211-33146257)
chr5 (42-87)||(28490031-28490076)
chr5 (51-124)||(28828431-28828504)
chr5 (1-42)||(37722889-37722930)
chr5 (52-88)||(2550348-2550384)
chr5 (1-37)||(2721560-2721596)
[»] scaffold0044 (2 HSPs)
scaffold0044 (1-118)||(56308-56425)
scaffold0044 (3-94)||(56306-56397)
[»] scaffold1562 (2 HSPs)
scaffold1562 (1-129)||(402-530)
scaffold1562 (55-124)||(493-562)
[»] scaffold1158 (2 HSPs)
scaffold1158 (1-129)||(2063-2191)
scaffold1158 (55-124)||(2031-2100)
[»] scaffold0169 (2 HSPs)
scaffold0169 (42-130)||(4071-4159)
scaffold0169 (1-42)||(4109-4150)
[»] scaffold0009 (3 HSPs)
scaffold0009 (47-126)||(41997-42076)
scaffold0009 (69-128)||(42080-42139)
scaffold0009 (1-42)||(42031-42072)
[»] scaffold0048 (1 HSPs)
scaffold0048 (44-124)||(82945-83025)
[»] scaffold0129 (1 HSPs)
scaffold0129 (43-131)||(19193-19280)
[»] scaffold0318 (1 HSPs)
scaffold0318 (42-126)||(2867-2950)
[»] scaffold0400 (1 HSPs)
scaffold0400 (42-125)||(4487-4570)
[»] scaffold0365 (1 HSPs)
scaffold0365 (42-125)||(5131-5214)
[»] scaffold0240 (1 HSPs)
scaffold0240 (29-88)||(17561-17620)
[»] scaffold0027 (1 HSPs)
scaffold0027 (42-107)||(10905-10970)


Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 50005204 - 50004942
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50005204 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 50005105  T
Q  101 aatattccgtcatccaaagacactcttagggtccgtttggtgcacatgatatataagaagataggatatgataaaactatcatatcctaatttaatttga 200  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  50005104 aatattccgtcatccaaacacactcttatggtccgtttggtgcacatgatatataagaagataggatatgataaaactatcatatcttaatctaatttga 50005005  T
Q  201 tgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatcctaatcaccct 263  Q
    |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||    
T  50005004 tgtttggtgcaccaataaaaaaggataatttaaacctatttctaatcctatcctaatcaccct 50004942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 38277540 - 38277412
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||  |||||||||||||||| |||||    
T  38277540 atgtaatgttttgagggaattcaattattttgaggtggatttaaacaatataattcacctcaaagtagttgaattccttcaaaacattacattccctcaa 38277441  T
Q  101 aatattccgtcatccaaagacactcttag 129  Q
    |||||||  ||||||||| ||||||||||    
T  38277440 aatattctctcatccaaacacactcttag 38277412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 4 - 131
Target Start/End: Complemental strand, 34756549 - 34756422
Alignment:
Q  4 taatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaat 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||     
T  34756549 taatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaac 34756450  T
Q  104 attccgtcatccaaagacactcttaggg 131  Q
    |||||  |||||||| || |||| ||||    
T  34756449 attcccccatccaaacactctctaaggg 34756422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 15034784 - 15034657
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| |||| |||||||||| ||||||||||||||||| |||||    
T  15034784 atgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaa 15034685  T
Q  101 aatattccgtcatccaaagacactctta 128  Q
    || |||||  |||||||| |||||||||    
T  15034684 aacattcctccatccaaacacactctta 15034657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 4038109 - 4038234
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || |||||||||  ||||||||||||||||||||| |||| |||||||||| ||||||||||||| ||| |||||    
T  4038109 atgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttccctcaa 4038208  T
Q  101 aatattccgtcatccaaagacactct 126  Q
    ||||||||  |||||||| |||||||    
T  4038209 aatattcccccatccaaacacactct 4038234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 32573047 - 32572960
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  32573047 atgtaatgttttgagggaattcaattcttttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacatt 32572960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 40264155 - 40264068
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||    
T  40264155 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcatctcaaagtagttgaattccctcaaaacatt 40264068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 28745921 - 28745799
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    ||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| || |||||||| |||||| |||||||||| |||||    
T  28745921 atgtaatattttgagggaattcaactattttgaggtgaattcaaacaatagaattcaccttaaataa-ttgaattccctcaaaccattacattccctcaa 28745823  T
Q  101 aatattccgtcatccaaagacact 124  Q
    ||||||||  |||||||| |||||    
T  28745822 aatattcccccatccaaatacact 28745799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 123
Target Start/End: Complemental strand, 45565515 - 45565397
Alignment:
Q  5 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaata 104  Q
    |||||||||||||||||||| || ||||||||| ||| |||||||||||||||||| |||  |||||||||| ||||||||||||||||||||||||| |    
T  45565515 aatgttttgagggaattcaactactttgaggtgaatttaaacaatagaattcaccttaaaatagttgaattccctcaaaacattacattctctcaaaaca 45565416  T
Q  105 ttccgtcatccaaagacac 123  Q
    ||||  |||||||| ||||    
T  45565415 ttcccccatccaaacacac 45565397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 44410436 - 44410311
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||| ||||||||||||||||||||||||   ||||||||| ||||||||||||||||||||  ||||||||||||| |||||||||||||| |||||    
T  44410436 atgtaaagttttgagggaattcaattatttttgagtggattcagacaatagaattcacctcaaaatagttgaattcgcttaaaacattacattccctcaa 44410337  T
Q  101 aatattccgtcatccaaagacactct 126  Q
    || ||||   |||||||| |||||||    
T  44410336 aacattctcccatccaaatacactct 44410311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 27804299 - 27804426
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    ||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||| || |||| ||||||||||  || ||||||||||||  |||||    
T  27804299 atgtaatattttgagggaattcaactattttgaggtgaattcaaacaatagaattcaacttaaagtagttgaattccttctaaacattacatttcctcaa 27804398  T
Q  101 aatattccgtcatccaaagacactctta 128  Q
    || |||||  |||||||| |||||||||    
T  27804399 aacattcctccatccaaacacactctta 27804426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 37214853 - 37214939
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  37214853 atgtaatgttttgagagaattcaattattttgaggtggattcaaacaatagaattcacctc-aagtagttgaattccctcaaaacatt 37214939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 130 - 260
Target Start/End: Complemental strand, 4076521 - 4076395
Alignment:
Q  130 ggtccgtttggtgcacatgatatataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataat 229  Q
    |||| |||||||||||||||||    || |||||||||||||||| ||||||||| ||| ||||||| || ||||||||||| ||||||||||||||||     
T  4076521 ggtcggtttggtgcacatgata----aggagataggatatgataacactatcatacccttatttaatctggtgtttggtgcatcaataggaaaggataaa 4076426  T
Q  230 ttaaacctatttctaattctatcctaatcac 260  Q
    ||||||||||| ||||| |||||||| ||||    
T  4076425 ttaaacctattactaatcctatcctattcac 4076395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 5474437 - 5474526
Alignment:
Q  5 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattc 94  Q
    ||||||||||||||||| ||||| ||||| ||| |||||||||||||||||||||| |||| |||||||||| |||||||||||||||||    
T  5474437 aatgttttgagggaatttaattactttgaagtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattc 5474526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 129 - 259
Target Start/End: Original strand, 26793696 - 26793822
Alignment:
Q  129 gggtccgtttggtgcacatgatatataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataa 228  Q
    ||||| |||||||||||||||||    |||||| | ||||||||| |||||||||||||| ||| |||  | |||||||||||||||||| |||||||||    
T  26793696 gggtctgtttggtgcacatgata----agaagacatgatatgatagaactatcatatcctgattcaatccgttgtttggtgcaccaatagaaaaggataa 26793791  T
Q  229 tttaaacctatttctaattctatcctaatca 259  Q
     |||||| |||||||||| ||||||||||||    
T  26793792 cttaaacttatttctaatcctatcctaatca 26793822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 6470672 - 6470759
Alignment:
Q  39 attcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    ||||||||||| |||| |||||||||||| |||||||| ||||||||||||||||||||||||| |||||| |||||||| |||||||    
T  6470672 attcaaacaatggaatccacctcaaagaatttgaattccctcaaaacattacattctctcaaaacattccgccatccaaacacactct 6470759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 23536101 - 23536188
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    |||||||||||||||||||||||| || ||||||||| |||||||||||| ||||||||| |||| |||||||||| |||||||||||    
T  23536101 atgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatataattcaccttaaagtagttgaattccctcaaaacatt 23536188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 15034693 - 15034818
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || ||| ||||| |||| |    | ||||||||||||||| |||||||||| ||||||||||||||||| |||||    
T  15034693 atgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaa 15034792  T
Q  101 aatattccgtcatccaaagacactct 126  Q
    || |||||  |||||||| |||||||    
T  15034793 aacattcccccatccaaacacactct 15034818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 260
Target Start/End: Complemental strand, 19806930 - 19806805
Alignment:
Q  133 ccgtttggtgcacatgatatataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggt--gcaccaataggaaaggataatt 230  Q
    |||||||||||||||||||    || |||||||||||||||| |||||| |||||| ||| ||| || ||||||||  ||| |||||||||||||||| |    
T  19806930 ccgtttggtgcacatgata----aggagataggatatgataacactatcctatccttattcaatctggtgtttggtttgcatcaataggaaaggataaat 19806835  T
Q  231 taaacctatttctaattctatcctaatcac 260  Q
    |||||||||||||||| |||||||| ||||    
T  19806834 taaacctatttctaatcctatcctattcac 19806805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 128
Target Start/End: Complemental strand, 23536188 - 23536065
Alignment:
Q  5 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaata 104  Q
    |||||||||||||||||||| || ||| ||||| |||  |    | ||||||||||||||| |||||||||| ||||||||||||||||| ||||||| |    
T  23536188 aatgttttgagggaattcaactactttaaggtgaattatattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaca 23536089  T
Q  105 ttccgtcatccaaagacactctta 128  Q
    ||||  |||||||| |||||||||    
T  23536088 ttcccccatccaaacacactctta 23536065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 27935610 - 27935523
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    |||||||||||||||| ||||||| || |||||| || |||||||||||||||||||||| |||| |||||||||  |||||||||||    
T  27935610 atgtaatgttttgaggaaattcaactactttgagttgaattcaaacaatagaattcacctgaaagtagttgaattttctcaaaacatt 27935523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 132
Target Start/End: Complemental strand, 8224852 - 8224762
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagggt 132  Q
    |||||||| |||||||| |||||| | || ||||| ||||||||||||||||| ||||||| ||||| ||||||||| |||||||||||||    
T  8224852 caaacaatggaattcacatcaaagtatttcaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactcttagggt 8224762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 4038198 - 4038073
Alignment:
Q  3 gtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaa 102  Q
    |||||||||||||||||||||| || ||| ||||| |||| |    | ||| ||||||||||| |||||||||| ||||||||||||||||| |||||||    
T  4038198 gtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaaagtagttgaattccctcaaaacattacattccctcaaaa 4038099  T
Q  103 tattccgtcatccaaagacactctta 128  Q
     |||||  || ||||| |||||||||    
T  4038098 cattcccccacccaaacacactctta 4038073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 165 - 263
Target Start/End: Complemental strand, 9383371 - 9383273
Alignment:
Q  165 gatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatcctaatcaccct 263  Q
    |||||||||||||||||| ||||| ||| |||    ||||||||||||||||||||| |||||| ||||||| |||||||||  ||||||| |||||||    
T  9383371 gatatgataaaactatcacatcctgattaaatccattgtttggtgcaccaataggaacggataaattaaaccaatttctaatcttatcctactcaccct 9383273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 26501068 - 26501154
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 128  Q
    |||||||| |||||||| |||||| | |||||||| ||||||||||||||||| ||||||| |||||  |||||||| |||||||||    
T  26501068 caaacaatggaattcacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctta 26501154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 25889194 - 25889243
Alignment:
Q  4 taatgttttgagggaattcaattattttgaggtggattcaaacaatagaa 53  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25889194 taatgttttgaaggaattcaattattttgaggtggattcaaacaatagaa 25889243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 28632575 - 28632663
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttaggg 131  Q
    |||||||| ||||||||||||||| | |||||||| ||||||||||||||||| ||| ||| ||||| ||||||||| ||||| ||||||    
T  28632575 caaacaatggaattcacctcaaagta-ttgaattctctcaaaacattacattccctccaaacattccctcatccaaacacactattaggg 28632663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 128
Target Start/End: Complemental strand, 31166397 - 31166308
Alignment:
Q  39 attcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 128  Q
    ||||||||||||||||||| ||||||  | ||| ||||  ||||||||||||||| |||||||| ||||| ||||||||| |||||||||    
T  31166397 attcaaacaatagaattcatctcaaaatatttgcattccatcaaaacattacattatctcaaaacattccctcatccaaacacactctta 31166308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 24273209 - 24273293
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    |||||||| ||||||||||||||| | |||||||| |||| |||||||||||| ||||||| |||||  |||||||| |||||||    
T  24273209 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 24273293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 131
Target Start/End: Original strand, 27935569 - 27935649
Alignment:
Q  51 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttaggg 131  Q
    ||||||| ||||||| |||||||||  ||||||||||||||||| ||||||||||| |  |||||||| ||||||||||||    
T  27935569 gaattcaactcaaagtagttgaatttcctcaaaacattacattccctcaaaatatttctccatccaaacacactcttaggg 27935649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 17502222 - 17502301
Alignment:
Q  9 ttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    ||||||| |||||||| || ||||||||| ||||||| ||||||||||| || |||| |||||||||| |||||||||||    
T  17502222 ttttgagagaattcaactactttgaggtgaattcaaataatagaattcaacttaaagtagttgaattccctcaaaacatt 17502301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 30190261 - 30190206
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattc 56  Q
    |||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||    
T  30190261 atgtaatgttttgaggtaattcaactattttgaggtgaattcaaacaatagaattc 30190206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 37448390 - 37448465
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaa 117  Q
    |||||||| |||||||| |||||| | || ||||| ||||||||||||||||||||||||| ||||| ||||||||    
T  37448390 caaacaatggaattcacatcaaagtatttaaattccctcaaaacattacattctctcaaaacattccctcatccaa 37448465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 28745831 - 28745947
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||| |||||||||||||||||||||  ||||| |||| |    | ||||||||||||||  |||||||||| ||||||| ||||||||| || ||    
T  28745831 atgtaatggtttgagggaattcaattattta-aggtgaattctattgtttgaattcacctcaaaatagttgaattccctcaaaatattacattcccttaa 28745929  T
Q  101 aatattccgtcatccaaa 118  Q
    |||||||  |||||||||    
T  28745930 aatattctctcatccaaa 28745947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 30209682 - 30209780
Alignment:
Q  126 ttagggtccgtttggtgcacatgatatataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaagga 225  Q
    ||||||||||||||||||||||||||    |||||  ||| |||||||||| |||||||||||| || ||| || |||||||| ||||||||| ||| ||    
T  30209682 ttagggtccgtttggtgcacatgata----agaagtcagggtatgataaaattatcatatcctacttaaatctgttgtttggtacaccaatagaaaatga 30209777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 32572960 - 32573072
Alignment:
Q  5 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaata 104  Q
    |||||||||||||||||||| || ||||||||| |||| |    | |||| |||||||||  | |||||||| ||||||||||||||||  |||||||||    
T  32572960 aatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaagaattgaattccctcaaaacattacattacctcaaaata 32573059  T
Q  105 ttccgtcatccaa 117  Q
    ||||  |||||||    
T  32573060 ttcccccatccaa 32573072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 126
Target Start/End: Original strand, 30190220 - 30190295
Alignment:
Q  51 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    ||||||||||||||  |||||||||  ||||||||||||||||| ||||||| |||||  |||||||| |||||||    
T  30190220 gaattcacctcaaaatagttgaattacctcaaaacattacattccctcaaaacattcccccatccaaacacactct 30190295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 34756461 - 34756584
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || ||||||||| |||| |    | |||| |||||||||  | |||||||| |||||||||||| |||  |||||    
T  34756461 atgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattatattacctcaa 34756560  T
Q  101 aatattccgtcatccaaagacact 124  Q
    |||||| |  |||||||| |||||    
T  34756561 aatatttccccatccaaacacact 34756584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 40264068 - 40264187
Alignment:
Q  5 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaata 104  Q
    |||||||||||||||||||| || |||||| || |||| |    | |||| |||||||||  | |||||||| ||||||||||||||||  |||||||||    
T  40264068 aatgttttgagggaattcaactactttgagatgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaata 40264167  T
Q  105 ttccgtcatccaaagacact 124  Q
    ||||  |||||||| |||||    
T  40264168 ttcccccatccaaacacact 40264187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 45565428 - 45565515
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    |||||||||||||||||||||||| |||||| ||||| |||| |    |  |||||||||||||| |||||||||| |||||||||||    
T  45565428 atgtaatgttttgagggaattcaactattttaaggtgaattctattgtttaaattcacctcaaagtagttgaattccctcaaaacatt 45565515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 50005113 - 50005236
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    ||||||||||||||| |||||||| |  ||||||||| |||| |    | |||| |||||||||  | |||||||| ||||||||||||||||  |||||    
T  50005113 atgtaatgttttgagcgaattcaacttctttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattacctcaa 50005212  T
Q  101 aatattccgtcatccaaagacact 124  Q
    ||||||||  |||||||| |||||    
T  50005213 aatattcctccatccaaacacact 50005236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 4950129 - 4950232
Alignment:
Q  128 agggtccgtttggtgcacatgatatataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggata 227  Q
    |||||| |||||||||||||||||    |||| ||| |||||||||||  |||| |||| |  || |||||||||||||||||| |||||| ||| ||||    
T  4950129 agggtcagtttggtgcacatgata----agaaaataagatatgataaacatatcctatcttgtttcaatttgatgtttggtgcatcaatagaaaatgata 4950224  T
Q  228 atttaaac 235  Q
    ||||||||    
T  4950225 atttaaac 4950232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 15245529 - 15245480
Alignment:
Q  39 attcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    |||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  15245529 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 15245480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 132
Target Start/End: Original strand, 43622964 - 43623057
Alignment:
Q  39 attcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagggt 132  Q
    ||||||| |||  |||||||||||||| | || ||||  |||||||||||||||||  |||||| |||||  |||||||| |||||||||||||    
T  43622964 attcaaataatgaaattcacctcaaagtatttaaattttctcaaaacattacattccatcaaaacattcccccatccaaacacactcttagggt 43623057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 47165201 - 47165285
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    |||||||| |||||||||| |||| | |||||||| ||||||||||||||||  ||||||| ||| |  |||||||| |||||||    
T  47165201 caaacaatggaattcaccttaaagtatttgaattccctcaaaacattacatttcctcaaaacatttctccatccaaacacactct 47165285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 27804340 - 27804273
Alignment:
Q  51 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaa 118  Q
    ||||||||||||||  |||||||||| ||||||| ||||||||| ||||||| |||||  ||||||||    
T  27804340 gaattcacctcaaaatagttgaattccctcaaaatattacattccctcaaaacattcccccatccaaa 27804273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 123
Target Start/End: Original strand, 37036940 - 37037019
Alignment:
Q  44 aacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacac 123  Q
    |||||| ||||| || |||||  | |||||||| ||||||||||||||||| ||||||| ||||| ||||||||| ||||    
T  37036940 aacaatggaatttacatcaaaatatttgaattccctcaaaacattacattcactcaaaacattccctcatccaaacacac 37037019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 242
Target Start/End: Original strand, 49236136 - 49236215
Alignment:
Q  163 aggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttc 242  Q
    ||||||||||| || ||||||||||| ||  ||| |  |||||||||||||||||| ||||||||| |||||| ||||||    
T  49236136 aggatatgatacaattatcatatcctgatgaaatctattgtttggtgcaccaatagaaaaggataaattaaacatatttc 49236215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 37447891 - 37447957
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattcc 108  Q
    |||||||| ||||||||||||| | | ||||||||  |||||||||||||||| ||| |||||||||    
T  37447891 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctccaaatattcc 37447957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 246
Target Start/End: Complemental strand, 42472149 - 42472056
Alignment:
Q  153 ataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaat 246  Q
    ||||||||| || ||||||||| ||| |||||||||| || |||  | ||||||||||| || ||||||| |||||  |||||||||| |||||    
T  42472149 ataagaagacagaatatgataacactgtcatatcctacttaaatccgttgtttggtgcatcagtaggaaatgataaaataaacctattactaat 42472056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 107
Target Start/End: Complemental strand, 44570762 - 44570697
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattc 107  Q
    |||||||| ||||||||||||| | | ||||||||  |||||||||||||||| ||||||| ||||    
T  44570762 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattc 44570697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 29446828 - 29446745
Alignment:
Q  47 aatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttaggg 131  Q
    |||||||||||||| ||| | ||||||||| |||||||||||||||||  |||||| |||||  | | |||| ||||||||||||    
T  29446828 aatagaattcaccttaaata-gttgaattccctcaaaacattacattccttcaaaacattcccccgttcaaacacactcttaggg 29446745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 17502301 - 17502222
Alignment:
Q  5 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaa 84  Q
    |||||||||||||||||||| || ||| || || |||| |  | | ||||||||||||||| |||||||||| |||||||    
T  17502301 aatgttttgagggaattcaactactttaagttgaattctattatttgaattcacctcaaagtagttgaattctctcaaaa 17502222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 38277449 - 38277556
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||| ||||||||| || ||||||||| |||  |    |  ||| |||||||||  | |||||||| ||||||||||||||||  |||||    
T  38277449 atgtaatgttttgaaggaattcaactactttgaggtgaattatattgtttaaatccacctcaaaataattgaattccctcaaaacattacattacctcaa 38277548  T
Q  101 aatattcc 108  Q
    ||||||||    
T  38277549 aatattcc 38277556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 129
Target Start/End: Complemental strand, 49659300 - 49659214
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 129  Q
    |||||||| ||||||||||||||| | || ||||| |||  |||||||||||| ||||| | |||||  |||||||| ||||||||||    
T  49659300 caaacaatggaattcacctcaaagtatttaaattccctcgtaacattacattccctcaatacattcc-ccatccaaacacactcttag 49659214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 129
Target Start/End: Complemental strand, 17502233 - 17502195
Alignment:
Q  91 attctctcaaaatattccgtcatccaaagacactcttag 129  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  17502233 attctctcaaaatattccctcatccaaacacactcttag 17502195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 108
Target Start/End: Complemental strand, 31195540 - 31195474
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattcc 108  Q
    |||||||| ||||||||||||||  | || ||||  |||| |||||||||||| |||||||||||||    
T  31195540 caaacaatggaattcacctcaaaatatttaaatttcctcagaacattacattccctcaaaatattcc 31195474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 255
Target Start/End: Complemental strand, 32712876 - 32712774
Alignment:
Q  153 ataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatc 252  Q
    |||| |||| ||||||| |||| |||||||||||| | || |||||   |||||||||| || ||||||||||| |  |||||||||| || || |||||    
T  32712876 ataaaaagacaggatataataacactatcatatcccacttaaatttttcgtttggtgcatcattaggaaaggatcaaataaacctattacttatcctatc 32712777  T
Q  253 cta 255  Q
    |||    
T  32712776 cta 32712774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 47074177 - 47074223
Alignment:
Q  9 ttttgagggaattcaattattttgaggtggattcaaacaatagaatt 55  Q
    |||||| ||||||||| || ||||||||| |||||||||||||||||    
T  47074177 ttttgaaggaattcaactactttgaggtgaattcaaacaatagaatt 47074223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6470725 - 6470684
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattc 42  Q
    |||||||||||||||||||||||| |  ||||||||||||||    
T  6470725 atgtaatgttttgagggaattcaaattctttgaggtggattc 6470684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 227
Target Start/End: Complemental strand, 12855407 - 12855317
Alignment:
Q  133 ccgtttggtgcacatgatatataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggata 227  Q
    |||||||||||||||||||    || ||| |||||||||||  | |||||||||||| || |||    |||||| ||||||||||||||||||||    
T  12855407 ccgtttggtgcacatgata----aggagacaggatatgatatcattatcatatcctatttaaatccattgtttgatgcaccaataggaaaggata 12855317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 32287934 - 32288007
Alignment:
Q  54 ttcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctt 127  Q
    ||||| |||||| | |||||||  ||||||||||||||||| |||||||  ||||  |||||||| ||||||||    
T  32287934 ttcacttcaaagtatttgaatttcctcaaaacattacattccctcaaaactttcctccatccaaacacactctt 32288007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 37036988 - 37036956
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttga 33  Q
    |||||||||||||||||||||||| ||||||||    
T  37036988 atgtaatgttttgagggaattcaaatattttga 37036956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 44410413 - 44410473
Alignment:
Q  69 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 129  Q
    |||||||| |||||||| |||||||  |||||||||||||   ||||||| ||||||||||    
T  44410413 ttgaattccctcaaaactttacattacctcaaaatattccccaatccaaacacactcttag 44410473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 49287979 - 49288043
Alignment:
Q  176 actatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatt 240  Q
    |||||||||||||| || |||||| | |||||||||||||||  ||| |||||  ||||||||||    
T  49287979 actatcatatcctatttaaatttgttatttggtgcaccaatacaaaatgataaaataaacctatt 49288043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 4e-47; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 29065944 - 29065817
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||    
T  29065944 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaa 29065845  T
Q  101 aatattccgtcatccaaagacactctta 128  Q
    || ||||   |||||||| |||||||||    
T  29065844 aacattcatccatccaaacacactctta 29065817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 5644802 - 5644674
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||    
T  5644802 atgtaatgttttgagggaattcaattattttgaggtgggttcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaa 5644703  T
Q  101 aatattccgtcatccaaagacactcttag 129  Q
    || |||||  ||| |||| ||||||||||    
T  5644702 aacattcctccattcaaacacactcttag 5644674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 40110863 - 40110735
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaa-caatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctca 99  Q
    |||||||||||||||||||||||| || ||||||||| ||||||| ||||||||||||||| |||| |||||||||| ||||||||||||||||| ||||    
T  40110863 atgtaatgttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctca 40110764  T
Q  100 aaatattccgtcatccaaagacactctta 128  Q
    ||| |||||  |||||||| |||||||||    
T  40110763 aaacattcccccatccaaacacactctta 40110735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 21635919 - 21636020
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||  |||||||||||||||| |||||    
T  21635919 atgtaatgttttgaggggattcaattattttgaggtggattcaaacaatagaattcatctcaaagtagttaaattccttcaaaacattacattccctcaa 21636018  T
Q  101 aa 102  Q
    ||    
T  21636019 aa 21636020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 46069506 - 46069423
Alignment:
Q  11 ttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattc 94  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  46069506 ttgagggaattcaattattttgagatggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattc 46069423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 2057429 - 2057554
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || |||||||||  ||||||||||| |||||||||  ||| |||||||||| ||||||||||||| ||| |||||    
T  2057429 atgtaatgttttgagggaattcaactactttgaggtgagttcaaacaataaaattcaccttgaagtagttgaattccctcaaaacattactttccctcaa 2057528  T
Q  101 aatattccgtcatccaaagacactct 126  Q
    ||||||||  |||||||| |||||||    
T  2057529 aatattcccccatccaaacacactct 2057554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 49052819 - 49052912
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattc 94  Q
    ||||||||||||||| |||||||| || |||||| || |||||||||||||||||||||| |||| |||||||||| |||||||||||||||||    
T  49052819 atgtaatgttttgagtgaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattc 49052912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 34388390 - 34388262
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    ||||||| |||||||||||||||| || |||||||||  |||||||||| |||||||||| |||| |||||||||| |||| |||||||| ||  |||||    
T  34388390 atgtaatattttgagggaattcaactactttgaggtgagttcaaacaatggaattcaccttaaagtagttgaattctctcagaacattacttttcctcaa 34388291  T
Q  101 aatattccgtcatccaaagacactcttag 129  Q
    |||||| |  |||||||| ||||||||||    
T  34388290 aatatttccccatccaaacacactcttag 34388262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 153 - 255
Target Start/End: Complemental strand, 23319094 - 23318992
Alignment:
Q  153 ataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatc 252  Q
    ||||||||| |||||||||||| ||||||||||||| ||| ||| || |||||||| |||||| | ||||||||||||||||||||||| |||| |||||    
T  23319094 ataagaagacaggatatgataacactatcatatcctgattaaatctgttgtttggtccaccaacatgaaaggataatttaaacctatttttaatcctatc 23318995  T
Q  253 cta 255  Q
    |||    
T  23318994 cta 23318992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 43955639 - 43955514
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || ||| ||||| |||| ||   ||||||||| || |||| |||||||||| ||||||||||||||||| |||||    
T  43955639 atgtaatgttttgagggaattcaactactttaaggtgcattctaa---tagaattcatcttaaagtagttgaattccctcaaaacattacattccctcaa 43955543  T
Q  101 aatattccgtcatccaaagacactcttag 129  Q
    || |||||  |||||||| ||||||||||    
T  43955542 aacattcccccatccaaacacactcttag 43955514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 44915231 - 44915322
Alignment:
Q  3 gtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattc 94  Q
    |||||||||||| ||||||||| || ||||||||| |||||||||||||||||||||| | || |||||||||| |||||||||||| ||||    
T  44915231 gtaatgttttgaaggaattcaactactttgaggtgaattcaaacaatagaattcaccttagagtagttgaattccctcaaaacattaaattc 44915322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 39644867 - 39644965
Alignment:
Q  157 gaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatccta 255  Q
    ||||| |||||||||||||||||||||||| || || |||||| |||||||||| ||||||| ||||||||| ||||||| |||| |||| ||||||||    
T  39644867 gaagacaggatatgataaaactatcatatcatatttcaatttgttgtttggtgcgccaatagaaaaggataacttaaacccatttataatcctatccta 39644965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 263
Target Start/End: Complemental strand, 41482592 - 41482466
Alignment:
Q  133 ccgtttggtgcacatgatatataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataattta 232  Q
    |||||||||||||||||||     ||||| | |||| |||||||||||||| |||| |||||||  | ||||||||||||||| |||||||||||| |||    
T  41482592 ccgtttggtgcacatgatag----gaagacatgataggataaaactatcatctcctgatttaatgcgctgtttggtgcaccaacaggaaaggataactta 41482497  T
Q  233 aacctatttctaattctatcctaatcaccct 263  Q
    ||||||||| ||||  ||||||| |||||||    
T  41482496 aacctatttttaatcatatcctactcaccct 41482466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 31632809 - 31632719
Alignment:
Q  39 attcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 129  Q
    ||||||||||| ||||||||||||||| | |||||||| |||| |||||||||||| ||||||| |||||  |||||||| ||||||||||    
T  31632809 attcaaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactcttag 31632719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 40854095 - 40854007
Alignment:
Q  1 atgtaatgttttgaggg-aattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    ||||||| ||||||||| ||||||| || |||||| || |||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  40854095 atgtaatattttgaggggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 40854007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 35776930 - 35777017
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 129  Q
    |||| ||| ||||||||||||||| | |||||||| |||| |||||||||||| ||||||| ||||| ||||||||| ||||||||||    
T  35776930 caaataatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattccctcatccaaacacactcttag 35777017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 40110771 - 40110902
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaata-gaattcacctcaaagaagttgaattcgctcaaaacattacattctctca 99  Q
    |||||||||||||||||||||||| || ||| ||||| |||| |    |  ||||||||||||||| |||||||||| ||||||||||||||||| |||     
T  40110771 atgtaatgttttgagggaattcaactactttaaggtgaattctattgttttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcg 40110870  T
Q  100 aaatattccgtcatccaaagacactcttaggg 131  Q
    ||| ||| |  |||||||| ||||||||||||    
T  40110871 aaacatttccccatccaaacacactcttaggg 40110902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 49052910 - 49052784
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || ||| ||||| |||| |    | ||||||| ||||||| |||||||||| ||||||||||||||||| |||||    
T  49052910 atgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattcactcaaaacattacattc-ctcaa 49052812  T
Q  101 aatattccgtcatccaaagacactctta 128  Q
    || |||   ||||||||| |||||||||    
T  49052811 aacattttctcatccaaacacactctta 49052784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 2057466 - 2057392
Alignment:
Q  55 tcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 129  Q
    ||||||||||| |||||||||| ||||||||||||||||| ||||||| |||||  |||||||| ||||||||||    
T  2057466 tcacctcaaagtagttgaattccctcaaaacattacattcgctcaaaacattcccccatccaaacacactcttag 2057392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 43955551 - 43955671
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || ||| || || |||| |    |||||| ||||| |||| |||||||||| ||||||||||||||||| |||||    
T  43955551 atgtaatgttttgagggaattcaactactttaagatgaattctat---tagaatgcaccttaaagtagttgaattccctcaaaacattacattccctcaa 43955647  T
Q  101 aatattccgtcatccaaagacact 124  Q
    || |||||  |||||||| |||||    
T  43955648 aacattcccccatccaaacacact 43955671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 44915317 - 44915192
Alignment:
Q  4 taatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaat 103  Q
    ||||||||||||||||||||| || | | ||||| |||| |    | ||||||||||||||| ||||||||||  |||||||||||| ||| |||||||     
T  44915317 taatgttttgagggaattcaactactctaaggtgaattctattgtttgaattcacctcaaagtagttgaattccttcaaaacattacgttccctcaaaaa 44915218  T
Q  104 attccgtcatccaaagacactcttag 129  Q
    ||||  ||||||||| ||||||||||    
T  44915217 attctctcatccaaacacactcttag 44915192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 18789221 - 18789305
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    |||||||| |||||||||| |||| | |||||||| |||| ||||||| ||||||||||||||||||  |||||||| |||||||    
T  18789221 caaacaatggaattcaccttaaagtatttgaattccctcataacattatattctctcaaaatattcctccatccaaacacactct 18789305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 26162112 - 26162196
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    |||||||| ||||||||||||||| | |||||||| |||| |||||||||||| ||||||| |||||  |||||||| |||||||    
T  26162112 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 26162196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 29065853 - 29065978
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || ||||||||| |||| |    | |||| |||||||||  | |||||||| ||||||||||||||||  || ||    
T  29065853 atgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattaccttaa 29065952  T
Q  101 aatattccgtcatccaaagacactct 126  Q
    || |||||  |||||||| |||||||    
T  29065953 aacattcctccatccaaacacactct 29065978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 6498740 - 6498824
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    |||||||| | |||||| |||||| | |||||||| ||||||||||||||||| ||||||| |||||  |||||||| |||||||    
T  6498740 caaacaatggtattcacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 6498824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 46482070 - 46481943
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||  ||||||| ||||| ||| || ||||||||||||||||||| ||  ||  |||| ||||  |||||||||||||||||| || |    
T  46482070 atgtaatgttttgagaaaattcaactattt-gagttgaattcaaacaatagaattcatcttcaaatagttaaatttcctcaaaacattacattctttcga 46481972  T
Q  101 aatattccgtcatccaaagacactcttag 129  Q
    ||||||    |||||||| ||||||||||    
T  46481971 aatattttcccatccaaacacactcttag 46481943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 34388353 - 34388424
Alignment:
Q  55 tcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    ||||||||||| |||||||||| ||||||| ||||||||| ||||||| ||||| |||| |||| |||||||    
T  34388353 tcacctcaaagtagttgaattccctcaaaatattacattccctcaaaacattccatcattcaaacacactct 34388424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 246
Target Start/End: Original strand, 39594604 - 39594687
Alignment:
Q  163 aggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaat 246  Q
    ||||||||||||||||||||||||||| || |||  | ||||||||||||||||| || | | ||| ||||||||||| |||||    
T  39594604 aggatatgataaaactatcatatcctacttaaatccgttgtttggtgcaccaataagatatgctaaattaaacctattactaat 39594687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 261
Target Start/End: Complemental strand, 2334133 - 2334034
Alignment:
Q  165 gatatgataaaactatcatatcctaa---tttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatcctaatcacc 261  Q
    |||||||||| ||||||||||||| |   || |||  | ||||||||||||||||||||  |||||| |||||||||||| |||| |||||||| |||||    
T  2334133 gatatgataacactatcatatcctgaatattcaatccggtgtttggtgcaccaataggattggataacttaaacctatttttaatcctatcctattcacc 2334034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 5644711 - 5644836
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || ||||||||| |||| |    | |||  |||||||||  | |||||||| ||||||||||||||||  |||||    
T  5644711 atgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaacccacctcaaaataattgaattccctcaaaacattacattacctcaa 5644810  T
Q  101 aatattccgtcatccaaagacactct 126  Q
    ||  ||||  |||||||| |||||||    
T  5644811 aacgttcccccatccaaacacactct 5644836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 263
Target Start/End: Original strand, 24429661 - 24429759
Alignment:
Q  166 atatgataaaactatcat-atcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatcctaatcaccct 263  Q
    |||||||||||||||||| ||||| ||| | | || || ||| ||||||||||| ||| ||||||||||| |||||| |||| ||||| || |||||||    
T  24429661 atatgataaaactatcattatcctgattcattctgctgcttgatgcaccaatagaaaatgataatttaaaactatttataatcctatcttactcaccct 24429759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 25189201 - 25189287
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 128  Q
    ||||||||  ||||||| |||||| | |||||||| ||||||||||| ||||  ||||||| |||||  |||||||| |||||||||    
T  25189201 caaacaatgaaattcacttcaaagtatttgaattccctcaaaacattgcattacctcaaaacattcccacatccaaacacactctta 25189287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 34398938 - 34399008
Alignment:
Q  57 acctcaaagaagttgaattcgc-tcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    ||||||||| |||||||||| | |||||||||||||||| ||||||| |||||  |||||||| |||||||    
T  34398938 acctcaaagtagttgaattcacctcaaaacattacattccctcaaaacattcccccatccaaacacactct 34399008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 40854007 - 40854133
Alignment:
Q  5 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgc-tcaaaacattacattctctcaaaat 103  Q
    |||||||||||||||||||| || ||| ||||| |||| |    | ||||||| ||||||| |||||||||| | |||||| ||||||||| |||| ||     
T  40854007 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattcccctcaaaatattacattccctcagaac 40854106  T
Q  104 attccgtcatccaaagacactcttagg 130  Q
    ||| |  |||||||| |||||||||||    
T  40854107 atttccccatccaaacacactcttagg 40854133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 43791174 - 43791116
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||| || |||||||||||| | |||||||| ||||||||||||||||| |||||    
T  43791174 caaacaatggagttcacctcaaagtatttgaattccctcaaaacattacattccctcaa 43791116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 18789600 - 18789544
Alignment:
Q  43 aaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctca 99  Q
    ||||||| ||||||||||||||| | |||||||| |||  |||||||||||||||||    
T  18789600 aaacaatggaattcacctcaaagtatttgaattccctcgtaacattacattctctca 18789544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 246
Target Start/End: Complemental strand, 41147989 - 41147921
Alignment:
Q  178 tatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaat 246  Q
    ||||||||||| |||  ||||| ||||||||||| |||||| ||||||||| |||||| ||||| ||||    
T  41147989 tatcatatcctgattccatttgttgtttggtgcatcaatagaaaaggataaattaaacttatttataat 41147921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 255
Target Start/End: Complemental strand, 45884787 - 45884695
Alignment:
Q  163 aggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatccta 255  Q
    |||||||||||||| ||||||||| | ||| ||| || ||||| |||||||| || ||| |||||||||||| | |||| ||||  |||||||    
T  45884787 aggatatgataaaattatcatatcttgattcaatatgttgtttagtgcaccagtatgaatggataatttaaaaccatttttaatcatatccta 45884695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 44107783 - 44107834
Alignment:
Q  201 tgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatc 252  Q
    |||||||||||||||||||||| ||||| |||||||| || ||||| |||||    
T  44107783 tgtttggtgcaccaataggaaatgataaattaaaccttttcctaatcctatc 44107834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 29639190 - 29639276
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 128  Q
    |||||||| ||||||||||||||  | |||||||  |||| |||||||||||| || |||| |||||  |||||| | |||||||||    
T  29639190 caaacaatggaattcacctcaaaatatttgaatttcctcataacattacattccctgaaaacattcccccatccatacacactctta 29639276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 32650657 - 32650611
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    ||||||||| |||||||||||||| | |||||||| |||||||||||    
T  32650657 caaacaataaaattcacctcaaagtatttgaattccctcaaaacatt 32650611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 29195756 - 29195707
Alignment:
Q  79 tcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 128  Q
    |||||||||||||||  |||||||||||||  |||||||| |||||||||    
T  29195756 tcaaaacattacattacctcaaaatattcctccatccaaacacactctta 29195707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 46069425 - 46069466
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattc 42  Q
    |||||||||||||||||||||||| || ||||||||| ||||    
T  46069425 atgtaatgttttgagggaattcaactactttgaggtgaattc 46069466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 22391562 - 22391622
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaa 102  Q
    ||||||||  |||||||||||||  | || ||||| ||||||||||||||||| |||||||    
T  22391562 caaacaatgaaattcacctcaaaatatttaaattctctcaaaacattacattccctcaaaa 22391622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 43791124 - 43791160
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtg 37  Q
    |||||||||||||||||||||||| || |||||||||    
T  43791124 atgtaatgttttgagggaattcaaatactttgaggtg 43791160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 96; Significance: 4e-47; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 10128008 - 10128139
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||    
T  10128008 atgtaatgttttgaaggaattcaattattttgaggtggattcaaacaatagaattcatctcaaagtagttgaattccctcaaaacattacattctctcaa 10128107  T
Q  101 aatattccgtcatccaaagacactcttagggt 132  Q
    || |||||  |||||||| ||||||| |||||    
T  10128108 aacattcccccatccaaatacactctaagggt 10128139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 15660217 - 15660342
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||| |||||    
T  15660217 atgtaatgttttgagggaattcaattattttgagatggattcaaacaatagaattcagctcaaagtagttgaattccctcaaaacattacattccctcaa 15660316  T
Q  101 aatattccgtcatccaaagacactct 126  Q
    || ||||| ||||||||| |||||||    
T  15660317 aacattccctcatccaaacacactct 15660342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 42844668 - 42844561
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||  |||||| ||||||||| |||||    
T  42844668 atgtaatgttttgagggaaatcaattattttgaagtggattcaaacaatagaattcacctcaaagtagttgaattccttcaaaatattacattccctcaa 42844569  T
Q  101 aatattcc 108  Q
    || |||||    
T  42844568 aacattcc 42844561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 26250943 - 26251030
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||    
T  26250943 atgtaatgttttgaggaaattcaattattttgaggtggattcaaataatagaattcacctcaaagtagttgaattccctcaaaacatt 26251030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 1107086 - 1107211
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||| ||||||||| || |||||| || |||||||||||||||||||||| | || |||||||||| |||||||||||| |||| |||||    
T  1107086 atgtaatgttttgaaggaattcaactactttgagatgaattcaaacaatagaattcaccttagagtagttgaattccctcaaaacattatattccctcaa 1107185  T
Q  101 aatattccgtcatccaaagacactct 126  Q
    ||||||||  |||||||| |||||||    
T  1107186 aatattcccccatccaaatacactct 1107211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 857364 - 857266
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctca 99  Q
    |||||||||||||||||||||||| || |||||| || |||||||||||||||||||||| |||| |||||||||| ||||||||||||||||| ||||    
T  857364 atgtaatgttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctca 857266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 28845993 - 28845879
Alignment:
Q  4 taatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaat 103  Q
    ||||||||||||||||||||| || |||||| || |||||||||||||||||||||| |||| |||||||||| ||| ||||||||||||| |||||||     
T  28845993 taatgttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcgaaacattacattccctcaaaac 28845894  T
Q  104 attccgtcatccaaa 118  Q
    |||||  ||||||||    
T  28845893 attcctccatccaaa 28845879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 7352937 - 7352814
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || |||||  || |||||||||||||||||||||| |||  ||||||||||  |||||||||||||||| |||||    
T  7352937 atgtaatgttttgagggaattcaactactttgaattgaattcaaacaatagaattcaccttaaaatagttgaattccatcaaaacattacattccctcaa 7352838  T
Q  101 aatattccgtcatccaaagacact 124  Q
    || |||||  |||||||| |||||    
T  7352837 aacattcccccatccaaacacact 7352814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 41498615 - 41498489
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctc-aaaacattacattctctca 99  Q
    |||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||| ||||  ||||||||| ||| |||||||||  ||||||||    
T  41498615 atgtaatgttttgaaggaattcaattattttgaggtgaatttaaacaatagaattcaccttaaagtggttgaattccctcaaaaacattattttctctca 41498516  T
Q  100 aaatattccgtcatccaaagacactct 126  Q
    ||| | |||  |||||||| |||||||    
T  41498515 aaacaatcccccatccaaacacactct 41498489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 14982396 - 14982280
Alignment:
Q  9 ttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattcc 108  Q
    |||||||||||||||| || ||||||||| ||||||| |||| ||||||||| |||| |||| ||||| ||||||||||||||||| ||||||| |||||    
T  14982396 ttttgagggaattcaactactttgaggtgaattcaaa-aataaaattcaccttaaagtagttaaattccctcaaaacattacattccctcaaaacattcc 14982298  T
Q  109 gtcatccaaagacactct 126  Q
      |||||||| |||||||    
T  14982297 tccatccaaacacactct 14982280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 36456004 - 36455907
Alignment:
Q  29 tttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    ||||||||| |||||||||||||||||||||| |||| |||||||||| |||||||||||| |||| ||||||| |||||  |||||||| |||||||    
T  36456004 tttgaggtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattagattccctcaaaacattcccccatccaaacacactct 36455907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 26251030 - 26250901
Alignment:
Q  5 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaata 104  Q
    |||||||||||||||||||| || ||||||||| |||| |  | | |||| |||||||||  | |||||||  ||||||||||||||||  |||||||||    
T  26251030 aatgttttgagggaattcaactactttgaggtgaattctattatttgaatccacctcaaaataattgaatttcctcaaaacattacattacctcaaaata 26250931  T
Q  105 ttccgtcatccaaagacactcttagggtcc 134  Q
    |||| ||||||||| ||||| |||||||||    
T  26250930 ttccctcatccaaacacactattagggtcc 26250901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 11041001 - 11041088
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    ||||||||||||||| |||||||| || ||||||||| || ||||||||||||||||||  |||| |||||||||| |||||||||||    
T  11041001 atgtaatgttttgagagaattcaactactttgaggtgaatccaaacaatagaattcaccataaagtagttgaattccctcaaaacatt 11041088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 857273 - 857398
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || ||| ||||| |||| |    | ||||||| ||||||| |||||||||| ||||||||||||||||| |||||    
T  857273 atgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaa 857372  T
Q  101 aatattccgtcatccaaagacactct 126  Q
    || ||| |  |||||||| |||||||    
T  857373 aacatttccccatccaaacacactct 857398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 7352846 - 7352975
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||| ||||||||| |||||| ||||| |||| |    | |||||||  |||||| |||||||||| ||||||||||||||||| |||||    
T  7352846 atgtaatgttttgatggaattcaactattttaaggtgaattctattgtttgaattcaattcaaagtagttgaattccctcaaaacattacattccctcaa 7352945  T
Q  101 aatattccgtcatccaaagacactcttagg 130  Q
    || ||| |  |||||||| |||||||||||    
T  7352946 aacatttccccatccaaacacactcttagg 7352975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 49111437 - 49111372
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaaga 66  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||| |||||    
T  49111437 atgtaatgttttgagggaattcaactattttgaggtgaattcaaacaatagaattccccttaaaga 49111372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 4441449 - 4441338
Alignment:
Q  5 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaata 104  Q
    |||||||||||| ||||||| || ||||||||| ||||||||||||||||||||         ||||||||| ||||||||||||||||| ||||||| |    
T  4441449 aatgttttgaggaaattcaactactttgaggtgaattcaaacaatagaattcac---------gttgaattccctcaaaacattacattccctcaaaaca 4441359  T
Q  105 ttccgtcatccaaagacactc 125  Q
    ||||  |||||||| ||||||    
T  4441358 ttccaccatccaaacacactc 4441338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 4896716 - 4896794
Alignment:
Q  51 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 129  Q
    ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||| |  |||||||| ||||| ||||    
T  4896716 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactattag 4896794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 128 - 255
Target Start/End: Complemental strand, 45413947 - 45413824
Alignment:
Q  128 agggtccgtttggtgcacatgatatataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggata 227  Q
    |||||||||||||||||| |||||     | ||| |||||| |||| |||||||||||| | ||| |||  | |||||||||||||||||||||||||||    
T  45413947 agggtccgtttggtgcacttgatag----ggagacaggataggatagaactatcatatcttgattcaatcggttgtttggtgcaccaataggaaaggata 45413852  T
Q  228 atttaaacctatttctaattctatccta 255  Q
    | |||||||||||||  || ||||||||    
T  45413851 aattaaacctatttcctatcctatccta 45413824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 46724241 - 46724195
Alignment:
Q  9 ttttgagggaattcaattattttgaggtggattcaaacaatagaatt 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  46724241 ttttgagggaattcaattattttgaggtggattcaaacaatagaatt 46724195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 11041040 - 11040968
Alignment:
Q  53 attcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    ||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||  |||||||| |||||||    
T  11041040 attcacctcaaagtagttgaattctctcaaaacattacattccctcaaaatattcc-ccatccaaacacactct 11040968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 2125941 - 2125857
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    |||||||| ||||||||| ||||| | |||||||| ||||||||| ||||||| |||||||||||||  |||||||| |||||||    
T  2125941 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaatattcccccatccaaacacactct 2125857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 31473933 - 31473849
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    ||||||||| |||||||||||||| | |||||||| |||| |||||||||||| ||||||| |||||  |||||||| |||||||    
T  31473933 caaacaataaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 31473849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 126
Target Start/End: Original strand, 49111396 - 49111471
Alignment:
Q  51 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    ||||||||||||||  |||||||||| ||||||||||||||||| ||||||| |||||  |||||||| |||||||    
T  49111396 gaattcacctcaaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 49111471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 130
Target Start/End: Complemental strand, 1112679 - 1112601
Alignment:
Q  52 aattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagg 130  Q
    |||||||||||||| |||||||||| ||| ||||||||||||  ||||||| |||||  |||||||| |||||||||||    
T  1112679 aattcacctcaaagtagttgaattccctcgaaacattacatttcctcaaaacattcccccatccaaacacactcttagg 1112601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 1539725 - 1539647
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaaga 120  Q
    ||||||||  |||||||||||||| | |||||||| ||||||||||||||||| ||||||| |||||  ||||||||||    
T  1539725 caaacaatgaaattcacctcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaaga 1539647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 255
Target Start/End: Original strand, 33451294 - 33451384
Alignment:
Q  165 gatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatccta 255  Q
    ||||||||||||||||| ||||||| || |||| | ||||||||||||||||| || | |||||  |||||||||| ||| ||||||||||    
T  33451294 gatatgataaaactatcgtatcctacttaaattcgttgtttggtgcaccaatatgatatgataaaataaacctattactacttctatccta 33451384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 28845905 - 28846030
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    ||||||||||| |||||||||||| || ||| ||||| |||| |    | ||||||| ||||||| |||||||||| |||||||||||| |||| |||||    
T  28845905 atgtaatgtttcgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattatattccctcaa 28846004  T
Q  101 aatattccgtcatccaaagacactct 126  Q
    || ||| |  |||||||| |||||||    
T  28846005 aacatttccccatccaaacacactct 28846030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 36456007 - 36456088
Alignment:
Q  48 atagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 129  Q
    ||||||||||||| |||| |||||||||  ||||||| ||||||||| ||||||| |||||  |||||||| ||||||||||    
T  36456007 atagaattcaccttaaagtagttgaatttcctcaaaatattacattccctcaaaacattcctccatccaaacacactcttag 36456088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 178 - 263
Target Start/End: Complemental strand, 36625667 - 36625582
Alignment:
Q  178 tatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatcctaatcaccct 263  Q
    |||||||||||| || |||||| |||||||||||| ||||||| | ||||| ||||||||||| | ||| |||||||| |||||||    
T  36625667 tatcatatcctatttaaatttgttgtttggtgcactaataggatatgataaattaaacctattacgaatcctatcctattcaccct 36625582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 15660308 - 15660180
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || |||||| || |||| |    | |||| || ||||||  | |||||||| ||||||||||||||||  |||||    
T  15660308 atgtaatgttttgagggaattcaactactttgagctgaattctattgtttgaatccatctcaaaataattgaattccctcaaaacattacattacctcaa 15660209  T
Q  101 aatattccgtcatccaaagacactcttag 129  Q
    ||||||||   ||||||| ||||||||||    
T  15660208 aatattcccctatccaaacacactcttag 15660180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 128
Target Start/End: Original strand, 41498575 - 41498651
Alignment:
Q  52 aattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 128  Q
    |||||||||||||  | ||||||||  |||||||||||||||| |||||||||||||  |||||||| |||||||||    
T  41498575 aattcacctcaaaataattgaattccttcaaaacattacattccctcaaaatattcctccatccaaacacactctta 41498651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 255
Target Start/End: Complemental strand, 42964602 - 42964500
Alignment:
Q  153 ataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatc 252  Q
    ||||| ||| ||||||||||||||||||| ||||||  |  |||  | | |||| ||||||||||||||||||||||||||||| ||| || || |||||    
T  42964602 ataagcagacaggatatgataaaactatcctatcctgctgaaatccggtatttgttgcaccaataggaaaggataatttaaacccattacttatcctatc 42964503  T
Q  253 cta 255  Q
    |||    
T  42964502 cta 42964500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 5715815 - 5715738
Alignment:
Q  55 tcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagggt 132  Q
    |||| |||||| | |||||||  |||||||||||||||| |||||||| ||||| ||||||||| ||||||| |||||    
T  5715815 tcacatcaaagtatttgaattacctcaaaacattacattatctcaaaacattccctcatccaaacacactctaagggt 5715738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 123
Target Start/End: Complemental strand, 10633116 - 10633035
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacac 123  Q
    ||||||||  |||||||||||||| | |||||||| |||| |||||||||||| ||||||| |||||  |||||||| ||||    
T  10633116 caaacaatgaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacac 10633035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 29091221 - 29091164
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctca 99  Q
    ||||||||||||||||| |||||| | |||||||| ||||||||||||||||| ||||    
T  29091221 caaacaatagaattcacatcaaagtatttgaattccctcaaaacattacattccctca 29091164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 255
Target Start/End: Complemental strand, 19181588 - 19181467
Alignment:
Q  130 ggtccgtttggtgcacatgatatataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataat 229  Q
    |||||||||||||||||||||| | |    || | |||||||||||| |||| |||||| ||  ||| |  ||||||||||||||| | || | |||||     
T  19181588 ggtccgtttggtgcacatgatagaga----gacatgatatgataaaattatcctatcctgatccaatctattgtttggtgcaccaacatgatatgataaa 19181493  T
Q  230 ttaaacctatttctaattctatccta 255  Q
    ||||||||||||||||| ||||||||    
T  19181492 ttaaacctatttctaatcctatccta 19181467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 1107174 - 1107047
Alignment:
Q  4 taatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctc-tcaaaa 102  Q
    ||||||||||||||||||||| || | | ||||| |||| |    | ||||||| ||||||| ||||||||||  |||||||||||||||| | | ||||    
T  1107174 taatgttttgagggaattcaactactctaaggtgaattctattgtttgaattcatctcaaagtagttgaattccttcaaaacattacattcccttaaaaa 1107075  T
Q  103 tattccgtcatccaaagacactcttagg 130  Q
     ||| | ||||||||| |||||||||||    
T  1107074 aatttcctcatccaaacacactcttagg 1107047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 255
Target Start/End: Original strand, 34666341 - 34666470
Alignment:
Q  126 ttagggtccgtttggtgcacatgatatataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcacca----ataggaa 221  Q
    ||||||||||||||||||||| |    ||||||||| || |||||||| |||||||||||| |  || |||  | ||||||||||| ||    |||||||    
T  34666341 ttagggtccgtttggtgcacagg----ataagaagacagaatatgatacaactatcatatcttgcttcaatacgttgtttggtgcagcaatatataggaa 34666436  T
Q  222 aggataatttaaacctatttctaattctatccta 255  Q
    | ||||| |||||||||||||||||  |||||||    
T  34666437 atgataacttaaacctatttctaatcatatccta 34666470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 4896705 - 4896643
Alignment:
Q  69 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttaggg 131  Q
    |||||||| ||||||||||||||||  |||||||||||||  |||||||| ||||||| ||||    
T  4896705 ttgaattccctcaaaacattacattacctcaaaatattcccccatccaaacacactctaaggg 4896643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 4896682 - 4896716
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgagg 35  Q
    |||||||||||||||||||||||||||||||||||    
T  4896682 atgtaatgttttgagggaattcaattattttgagg 4896716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 31742811 - 31742845
Alignment:
Q  2 tgtaatgttttgagggaattcaattattttgaggt 36  Q
    |||||||||||||||||||||||||||||||||||    
T  31742811 tgtaatgttttgagggaattcaattattttgaggt 31742845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 55945760 - 55945706
Alignment:
Q  201 tgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatccta 255  Q
    |||||||||||||||||||||||||||| |  || ||||||||||| ||||||||    
T  55945760 tgtttggtgcaccaataggaaaggataaatccaatctatttctaatcctatccta 55945706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 1112704 - 1112757
Alignment:
Q  49 tagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaa 102  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||  |||||||    
T  1112704 tagaattcacctcaaagtagttgaattccctcgaaacattacatttgctcaaaa 1112757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 2183295 - 2183356
Alignment:
Q  194 aatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatccta 255  Q
    |||||| |||||||||||||||||| ||||||||| ||||||  ||||| ||| ||||||||    
T  2183295 aatttgttgtttggtgcaccaatagaaaaggataaattaaactcatttccaatcctatccta 2183356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 11348327 - 11348396
Alignment:
Q  57 acctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    |||||||||  ||||||||| ||||||||||||||||| || |||| |||||  |||||||| |||||||    
T  11348327 acctcaaagttgttgaattccctcaaaacattacattcccttaaaacattcccccatccaaatacactct 11348396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 26534577 - 26534525
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattc 94  Q
    |||||||||||||||||  ||||| | |||||||| |||||||||||||||||    
T  26534577 caaacaatagaattcacaacaaagtatttgaattccctcaaaacattacattc 26534525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 12914060 - 12914119
Alignment:
Q  29 tttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    ||||||||| |||||||||||| |||||| || |||  |||||||||| |||||||||||    
T  12914060 tttgaggtgaattcaaacaataaaattcatcttaaaatagttgaattccctcaaaacatt 12914119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 16300209 - 16300260
Alignment:
Q  43 aaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattc 94  Q
    ||||||| ||||||||||||||| | |||||||  |||||||||||||||||    
T  16300209 aaacaatggaattcacctcaaagtatttgaattttctcaaaacattacattc 16300260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 93
Target Start/End: Complemental strand, 41139557 - 41139506
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacatt 93  Q
    ||||||||||||||||||| |||| | |||||||  ||||||||||||||||    
T  41139557 caaacaatagaattcacctaaaagtatttgaatttcctcaaaacattacatt 41139506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 124
Target Start/End: Original strand, 19461725 - 19461807
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 124  Q
    |||||||||||||| |  |||||  | |||||||||||||||||||||||||   |||||||||| |  |||||||| |||||    
T  19461725 caaacaatagaatttatatcaaattatttgaattcgctcaaaacattacattacttcaaaatatttccccatccaaaaacact 19461807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 32724961 - 32725003
Alignment:
Q  13 gagggaattcaattattttgaggtggattcaaacaatagaatt 55  Q
    ||||||||||||||| |||||||||  ||||||||||||||||    
T  32724961 gagggaattcaattactttgaggtgagttcaaacaatagaatt 32725003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 42775689 - 42775643
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    |||||||| ||||||||||||||| | |||||||| |||||||||||    
T  42775689 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 42775643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4896757 - 4896716
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattc 42  Q
    |||||||||||||||||||||||| || ||||||||| ||||    
T  4896757 atgtaatgttttgagggaattcaactactttgaggtgaattc 4896716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 31742875 - 31742924
Alignment:
Q  78 ctcaaaacattacattctctcaaaatattccgtcatccaaagacactctt 127  Q
    ||||||||||||||||| ||||||| |||||  |||||||| ||||||||    
T  31742875 ctcaaaacattacattccctcaaaacattcctccatccaaacacactctt 31742924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 43481412 - 43481367
Alignment:
Q  201 tgtttggtgcaccaataggaaaggataatttaaacctatttctaat 246  Q
    ||||||||||||||||| |||||||||| ||||||  |||||||||    
T  43481412 tgtttggtgcaccaataagaaaggataaattaaactcatttctaat 43481367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 1539675 - 1539711
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtg 37  Q
    |||||||||||||||||||||||| || |||||||||    
T  1539675 atgtaatgttttgagggaattcaaatactttgaggtg 1539711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 16516255 - 16516171
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    |||||||| || ||||| |||||| | || |||||  ||||||||||||||||  |||||| |||||  |||||||| |||||||    
T  16516255 caaacaatggagttcacatcaaagtatttaaattccttcaaaacattacattccgtcaaaacattcccccatccaaacacactct 16516171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 9e-45; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 31070531 - 31070424
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||    
T  31070531 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaa 31070432  T
Q  101 aatattcc 108  Q
    || |||||    
T  31070431 aacattcc 31070424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 44436383 - 44436254
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| |||  |||||||||  ||||||||||||||||| |||||    
T  44436383 atgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaaatagttgaatttcctcaaaacattacattccctcaa 44436284  T
Q  101 aatattccgtcatccaaagacactcttagg 130  Q
    || |||||  |||||||| |||||||||||    
T  44436283 aacattcccccatccaaacacactcttagg 44436254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 44692947 - 44692822
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| ||||  ||||||||| ||||||||||||| ||| |||||    
T  44692947 atgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtggttgaattccctcaaaacattactttccctcaa 44692848  T
Q  101 aatattccgtcatccaaagacactct 126  Q
    || |||||  |||||||| |||||||    
T  44692847 aacattcccccatccaaacacactct 44692822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 9129469 - 9129342
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || ||||||||| ||||||||||||||||||| || |||| ||||||||||  |||||||||||||||| |||||    
T  9129469 atgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaagtagttgaattccatcaaaacattacattccctcaa 9129370  T
Q  101 aatattccgtcatccaaagacactctta 128  Q
    |||| ||   |||||||| |||||||||    
T  9129369 aatagtctcccatccaaacacactctta 9129342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 9137576 - 9137449
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || ||||||||| ||||||||||||||||||| || |||| ||||||||||  |||||||||||||||| |||||    
T  9137576 atgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaagtagttgaattccatcaaaacattacattccctcaa 9137477  T
Q  101 aatattccgtcatccaaagacactctta 128  Q
    |||| ||   |||||||| |||||||||    
T  9137476 aatagtctcccatccaaacacactctta 9137449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 46429521 - 46429434
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  46429521 atgtaatgttttgaaggaattcaattattttgaggtggattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 46429434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 47284351 - 47284268
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaa 84  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||| |||||||    
T  47284351 atgtaatgttttgagggaattcaattattttgaggttgattcaaacaatagaattcacctcaaagtagctgaattccctcaaaa 47284268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 5415817 - 5415942
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || ||| |||||  | ||||||||||||||||||| |||| ||||||||||  |||||||||||| ||| |||||    
T  5415817 atgtaatgttttgagggaattcaactactttaaggtgagtacaaacaatagaattcaccttaaagtagttgaattccatcaaaacattactttccctcaa 5415916  T
Q  101 aatattccgtcatccaaagacactct 126  Q
    ||||||||  |||||||| |||||||    
T  5415917 aatattcccccatccaaacacactct 5415942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 28092248 - 28092335
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    |||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||  |||||||||| |||||||||||    
T  28092248 atgtgatgttttgagggaattcaattactttgaggtgaattcaaacaatagaattcacctcaaaacagttgaattccctcaaaacatt 28092335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 44692858 - 44692987
Alignment:
Q  3 gtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaa 102  Q
    ||||||||||||||||||||||  | ||| ||||| |||| |    | ||||||||||||||| |||||||||| ||||||||||||||||| |||||||    
T  44692858 gtaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaa 44692957  T
Q  103 tattccgtcatccaaagacactcttagggt 132  Q
     |||||  |||||||| |||||||||||||    
T  44692958 cattcctccatccaaacacactcttagggt 44692987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 9129378 - 9129505
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||| ||||||||| || ||| || || |||| |    | ||||||||||||||| |||||||||| ||||||||||||||||| |||||    
T  9129378 atgtaatgttttgatggaattcaactactttaagttgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaa 9129477  T
Q  101 aatattccgtcatccaaagacactctta 128  Q
    || ||||| ||||||||| |||||||||    
T  9129478 aacattccctcatccaaacacactctta 9129505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 9137485 - 9137612
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||| ||||||||| || ||| || || |||| |    | ||||||||||||||| |||||||||| ||||||||||||||||| |||||    
T  9137485 atgtaatgttttgatggaattcaactactttaagttgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaa 9137584  T
Q  101 aatattccgtcatccaaagacactctta 128  Q
    || ||||| ||||||||| |||||||||    
T  9137585 aacattccctcatccaaacacactctta 9137612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 27252019 - 27251932
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    |||||||||||||||||||||||| || ||||||||| ||||||||||||||||||| || |||| |||||||||| || ||||||||    
T  27252019 atgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaagtagttgaattcccttaaaacatt 27251932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 42130726 - 42130819
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattc 94  Q
    |||||||||||||||||||||||||||| || | ||||||||||| | ||||||||||||||||| | |||||||| || |||| |||||||||    
T  42130726 atgtaatgttttgagggaattcaattatctttaagtggattcaaagagtagaattcacctcaaagtaattgaattccctaaaaagattacattc 42130819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 332012 - 332096
Alignment:
Q  5 aatgttttgagggaattcaattattttgaggtggattcaaa-caatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    |||||||||||||||||||| || ||||||||| ||||||| ||||||||||||||| |||| |||||||||| |||||||||||    
T  332012 aatgttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 332096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 39215960 - 39215888
Alignment:
Q  4 taatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattc 76  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||    
T  39215960 taatgttttgagaaaattcaattattttgaggtggattcaaacaataaaattcacctcaaagtaattgaattc 39215888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 46672799 - 46672875
Alignment:
Q  50 agaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    |||||||||||||||| |||||||||| ||||||||||||||||| ||||||| |||||  |||||||| |||||||    
T  46672799 agaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 46672875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 49457423 - 49457339
Alignment:
Q  46 caatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagg 130  Q
    ||||||||||||||| ||||  ||||||||| ||||||||||||||||| ||||||| |||||  |||||||| |||||||||||    
T  49457423 caatagaattcaccttaaagtggttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactcttagg 49457339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 130
Target Start/End: Original strand, 27251978 - 27252057
Alignment:
Q  51 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagg 130  Q
    ||||||||||||||| |||||||||| ||||||||||||||||| ||||||| || ||  |||||||| |||||||||||    
T  27251978 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacatccccccatccaaacacactcttagg 27252057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 42 - 128
Target Start/End: Complemental strand, 7302430 - 7302344
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 128  Q
    |||||||| ||||||||||||| | |  |||||||  |||||||||||||||||||||||| ||||| ||||||||| |||||||||    
T  7302430 caaacaatggaattcacctcaaggtatctgaattccttcaaaacattacattctctcaaaacattccctcatccaaacacactctta 7302344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 255
Target Start/End: Original strand, 32490872 - 32490964
Alignment:
Q  163 aggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatccta 255  Q
    |||||||||||| |||||||||| ||| || |||    ||||||||||||||||| |||||||||||  ||||||||| ||||||||||||||    
T  32490872 aggatatgataacactatcatattctatttaaatcctttgtttggtgcaccaatatgaaaggataatcgaaacctattgctaattctatccta 32490964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 44436292 - 44436384
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacatt 93  Q
    |||||||||||||||| ||||||| |||||| ||||| |||| |    | ||||||||||||||| |||||||||| ||||||||||||||||    
T  44436292 atgtaatgttttgaggaaattcaactattttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacatt 44436384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 25655335 - 25655418
Alignment:
Q  5 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    |||||||||||||||||||| || |||||| || ||||||| ||||||||||| || |||| ||||||||||  ||||||||||    
T  25655335 aatgttttgagggaattcaactactttgagttgaattcaaataatagaattcaacttaaagtagttgaattccgtcaaaacatt 25655418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 46429434 - 46429561
Alignment:
Q  5 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaata 104  Q
    |||||||||||||||||||| || ||| ||||| |||| |    | |||| |||||||||  | ||||||||  |||||||||||||||  |||||||||    
T  46429434 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaatccacctcaaaataattgaattccttcaaaacattacattacctcaaaata 46429533  T
Q  105 ttccgtcatccaaagacactcttagggt 132  Q
    |||| ||||||||| ||||||| |||||    
T  46429534 ttccctcatccaaacacactctaagggt 46429561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 53129831 - 53129918
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 129  Q
    |||||||| ||||||||| ||||| | |||||||| || |||||||||||||| ||| ||| ||||| ||||||||| ||||||||||    
T  53129831 caaacaatggaattcaccccaaagtatttgaattcccttaaaacattacattccctcgaaacattccctcatccaaacacactcttag 53129918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 31070440 - 31070546
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || ||||||||| |||| |    | |||| |||||||||  | |||||||| ||||||||||||||||  |||||    
T  31070440 atgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattacctcaa 31070539  T
Q  101 aatattc 107  Q
    |||||||    
T  31070540 aatattc 31070546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 28092335 - 28092222
Alignment:
Q  5 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaata 104  Q
    |||||||||||||||||||| | |||||||||| |||| |    | ||||||||||||||| | |||||||| |||||||||| |||||  ||||||| |    
T  28092335 aatgttttgagggaattcaactgttttgaggtgaattctattgtttgaattcacctcaaagtaattgaattccctcaaaacatcacatttcctcaaaaca 28092236  T
Q  105 ttccgtcatccaaa 118  Q
    ||||  ||||||||    
T  28092235 ttcccccatccaaa 28092222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 5415854 - 5415782
Alignment:
Q  55 tcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctt 127  Q
    |||||| |||| |||||||||| ||||||||||||||||| |||||||||||||   ||||||| ||||||||    
T  5415854 tcaccttaaagtagttgaattccctcaaaacattacattccctcaaaatattcccctatccaaacacactctt 5415782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 21307520 - 21307596
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaa 118  Q
    |||||||| ||||||||||||||| | |||||||| ||||||||||||||||| | ||||| |||||  ||||||||    
T  21307520 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattcccgcaaaacattcccccatccaaa 21307596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 39110469 - 39110394
Alignment:
Q  51 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    ||||||| ||||||| |||||||||| | ||||||||||||||| ||||||| ||| | ||||||||| |||||||    
T  39110469 gaattcaactcaaagtagttgaattcccacaaaacattacattcgctcaaaacatttcttcatccaaacacactct 39110394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 48936451 - 48936355
Alignment:
Q  157 gaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatccta 255  Q
    ||||| |||||||||||| |||||||||||||  || |||  | ||||||||||||||| |||||  |||||||||||||| ||| |||| ||||||||    
T  48936451 gaagacaggatatgataagactatcatatcctgtttcaatccgttgtttggtgcaccaacaggaa--gataatttaaacctgtttttaatcctatccta 48936355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 39110428 - 39110485
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcac 58  Q
    ||||||||||||| |||||||||| || |||||| || ||||||||||||||||||||    
T  39110428 atgtaatgttttgtgggaattcaactactttgagttgaattcaaacaatagaattcac 39110485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 42005941 - 42006030
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttaggg 131  Q
    ||||||||  |||||||||||| | | || |||||  |||||||||||||||| ||||||| |||||  |||||||| ||||||||||||    
T  42005941 caaacaatgaaattcacctcaaggtatttaaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactcttaggg 42006030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 19475900 - 19475824
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaa 118  Q
    |||||||| ||||||||||||||| | |||||||  |||| |||||||||||| ||||||| |||||  ||||||||    
T  19475900 caaacaatggaattcacctcaaagtatttgaattacctcataacattacattccctcaaaacattcctccatccaaa 19475824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 47767516 - 47767432
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    ||||||||  |||||||||||| | | ||||||||  |||||||||||||||| ||||||| |||||  |||||||| |||||||    
T  47767516 caaacaatgtaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactct 47767432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 37321625 - 37321550
Alignment:
Q  51 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    |||||||||| |||| |||||||||  ||||||||||||| ||  |||||||||||||  |||||||| |||||||    
T  37321625 gaattcaccttaaagtagttgaatttcctcaaaacattacttttcctcaaaatattcccccatccaaatacactct 37321550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 45818758 - 45818671
Alignment:
Q  153 ataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatt 240  Q
    ||||||||| |||||||||||| |||||||||||||| || |||  | ||||||||||| || ||| ||| |||||  ||||||||||    
T  45818758 ataagaagacaggatatgataacactatcatatcctacttaaatccgttgtttggtgcatcagtagcaaaagataaaataaacctatt 45818671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 129
Target Start/End: Complemental strand, 46001420 - 46001361
Alignment:
Q  70 tgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 129  Q
    ||||||| ||| ||||||||||||  |||||||||||||| |||||||| ||||||||||    
T  46001420 tgaattccctcgaaacattacattacctcaaaatattccgccatccaaacacactcttag 46001361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 108
Target Start/End: Complemental strand, 30766637 - 30766571
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattcc 108  Q
    |||||||| ||||||||||||| | | ||||||||  |||||||||||||||| ||||||| |||||    
T  30766637 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcc 30766571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 32795014 - 32794945
Alignment:
Q  178 tatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaatt 247  Q
    ||||||||||| |||||||||| || ||||||||| ||||  ||| |||||||||||  |||||||||||    
T  32795014 tatcatatcctgatttaatttgttggttggtgcactaataaaaaatgataatttaaatttatttctaatt 32794945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 39795383 - 39795330
Alignment:
Q  165 gatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaatag 218  Q
    |||||||||| |||||||||||||| || ||| || ||||||||||||||||||    
T  39795383 gatatgataacactatcatatcctacttaaatatgttgtttggtgcaccaatag 39795330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 47284328 - 47284385
Alignment:
Q  69 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    |||||||| ||||||||||||||||  ||||||||||||  ||||||||| |||||||    
T  47284328 ttgaattccctcaaaacattacattacctcaaaatattctctcatccaaacacactct 47284385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 31189385 - 31189469
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    ||||| ||| |||| ||||||||| | |||||||| ||||||||||||||||  ||||||| ||||  |||| |||| |||||||    
T  31189385 caaacgataaaatttacctcaaagtatttgaattctctcaaaacattacattacctcaaaacattctctcattcaaacacactct 31189469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 37054478 - 37054394
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    ||||||||  |||||||||||| | | ||||||||  |||||||||||||||| || |||| |||||  |||||||| |||||||    
T  37054478 caaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattcccttaaaacattcccccatccaaacacactct 37054394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 40929704 - 40929605
Alignment:
Q  29 tttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 128  Q
    ||||||||| |||||||||||||||||||  | |||  |||||||||  |||  ||||||| ||||||| |||| |||||  |||||||| |||||||||    
T  40929704 tttgaggtgaattcaaacaatagaattcatattaaaatagttgaattttctccgaacattatattctctgaaaacattcc-ccatccaaacacactctta 40929606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 46672841 - 46672772
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattc 76  Q
    |||||||||||||||||||||||| || ||||||||| ||||      | ||||||||||||||| ||||||||||    
T  46672841 atgtaatgttttgagggaattcaactactttgaggtgaattc------ttgaattcacctcaaagtagttgaattc 46672772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 35279920 - 35279978
Alignment:
Q  72 aattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagg 130  Q
    ||||| ||||||||||||||||| ||||||| |||||  |||||||| ||| |||||||    
T  35279920 aattcactcaaaacattacattccctcaaaacattcccccatccaaacacattcttagg 35279978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 40416911 - 40417009
Alignment:
Q  157 gaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatccta 255  Q
    ||||| ||||||||| ||||||||||||||||  || |||  | ||||||||||| ||| || ||| ||||| |||||  ||||| |||| ||||||||    
T  40416911 gaagacaggatatgaaaaaactatcatatcctgcttcaatccgttgtttggtgcatcaacagaaaatgataaattaaatatatttttaatcctatccta 40417009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 332049 - 332012
Alignment:
Q  51 gaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  332049 gaattcacctcaaagtagttgaattccctcaaaacatt 332012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 107
Target Start/End: Complemental strand, 7976632 - 7976567
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattc 107  Q
    |||||||||||||||||||||| | | || |||||  ||||||||||||||||  |||||| ||||    
T  7976632 caaacaatagaattcacctcaatgtatttaaattccttcaaaacattacattccttcaaaacattc 7976567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 8762210 - 8762153
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctca 99  Q
    |||||||| |||||||| |||||| | |||||||| |||| ||||||||||| |||||    
T  8762210 caaacaatggaattcacatcaaagtatttgaattccctcataacattacattatctca 8762153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21307570 - 21307529
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattc 42  Q
    |||||||||||||||||||||||| || ||||||||| ||||    
T  21307570 atgtaatgttttgagggaattcaaatactttgaggtgaattc 21307529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 38506861 - 38506910
Alignment:
Q  39 attcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    ||||||||||| ||||||||||||||  | |||||||| |||||||||||    
T  38506861 attcaaacaatggaattcacctcaaattatttgaattccctcaaaacatt 38506910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 186
Target Start/End: Complemental strand, 44764204 - 44764176
Alignment:
Q  158 aagataggatatgataaaactatcatatc 186  Q
    |||||||||||||||||||||||||||||    
T  44764204 aagataggatatgataaaactatcatatc 44764176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 9e-45; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 27033607 - 27033488
Alignment:
Q  9 ttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattcc 108  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||    
T  27033607 ttttgagggaattcaattcttttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattctctcaaaacattcc 27033508  T
Q  109 gtcatccaaagacactctta 128  Q
      |||||||| |||||||||    
T  27033507 cccatccaaacacactctta 27033488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 41461549 - 41461674
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||| |||||    
T  41461549 atgtaatgttttgagggaatttaattattttgaggtggattcaaacaatagaattcacctcaaaatagttgaattccctcaaaacattacattccctcaa 41461648  T
Q  101 aatattccgtcatccaaagacactct 126  Q
    || |||||  |||||||| |||||||    
T  41461649 aacattcccccatccaaacacactct 41461674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 784827 - 784952
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||| |||||| || || |||||| || |||||||||||||||||||||| |||| |||||||||| |||||||||||||||||  ||||    
T  784827 atgtaatgttttgaaggaatttaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccatcaa 784926  T
Q  101 aatattccgtcatccaaagacactct 126  Q
    ||||||||  |||||||| |||||||    
T  784927 aatattcccccatccaaacacactct 784952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 14365734 - 14365858
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaa-caatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctca 99  Q
    |||||||||||||||||||||||| || ||||||||| ||||||| ||||||||||||||  |||| |||||||||| ||||||||||||||||| ||||    
T  14365734 atgtaatgttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcacc--aaagtagttgaattccctcaaaacattacattccctca 14365831  T
Q  100 aaatattccgtcatccaaagacactct 126  Q
    ||| |||||  |||||||| |||||||    
T  14365832 aaacattcctccatccaaacacactct 14365858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 157 - 263
Target Start/End: Original strand, 40626432 - 40626538
Alignment:
Q  157 gaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatcctaa 256  Q
    ||||| |||||||||||||||||||||||| | ||| ||| || ||||||||||||||||||||||||||||||||||  |||||||||| ||||||||     
T  40626432 gaagacaggatatgataaaactatcatatcttgattcaatctgctgtttggtgcaccaataggaaaggataatttaaatatatttctaatcctatcctac 40626531  T
Q  257 tcaccct 263  Q
    |||||||    
T  40626532 tcaccct 40626538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 14537233 - 14537320
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    |||||||||||||||| ||||||| || ||||||||| |||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  14537233 atgtaatgttttgaggtaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 14537320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 128 - 263
Target Start/End: Original strand, 18665098 - 18665229
Alignment:
Q  128 agggtccgtttggtgcacatgatatataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggata 227  Q
    ||||||||||||||||||| ||||     ||| |||| ||||||||||||||||||||| |  | ||||||| ||||| ||||||||| |||||||||||    
T  18665098 agggtccgtttggtgcacaagatag----gaacatagaatatgataaaactatcatatcttggtgtaatttgttgtttcgtgcaccaaaaggaaaggata 18665193  T
Q  228 atttaaacctatttctaattctatcctaatcaccct 263  Q
    | |||||||||||||||||  |||| || |||||||    
T  18665194 acttaaacctatttctaataatatcttactcaccct 18665229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 10244298 - 10244177
Alignment:
Q  5 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaata 104  Q
    |||||||| ||||||||||| || |||||||||  ||||||||||| |||||||||  ||| |||||||||| ||||||||||||| ||| |||| ||||    
T  10244298 aatgttttaagggaattcaactactttgaggtgagttcaaacaataaaattcaccttgaagtagttgaattccctcaaaacattactttccctcagaata 10244199  T
Q  105 ttccgtcatccaaagacactct 126  Q
    |||   |||||||| |||||||    
T  10244198 ttctcccatccaaacacactct 10244177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 11716442 - 11716550
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||         |||||||| ||||||||||||||||| |||||    
T  11716442 atgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcacc---------ttgaattccctcaaaacattacattccctcaa 11716532  T
Q  101 aatattccgtcatccaaa 118  Q
    || |||||  ||||||||    
T  11716533 aacattcccccatccaaa 11716550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 11684711 - 11684596
Alignment:
Q  5 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaata 104  Q
    |||||||||||||||||||| || ||||||||| |||||||||||||||||||||         |||||||| ||||||||||||||||| ||||||| |    
T  11684711 aatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcacc---------ttgaattccctcaaaacattacattccctcaaaaca 11684621  T
Q  105 ttccgtcatccaaagacactcttag 129  Q
    ||||  |||||||| ||| ||||||    
T  11684620 ttcccccatccaaacacattcttag 11684596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 11824718 - 11824801
Alignment:
Q  5 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    |||||||||||||||||||| || |||||| || |||||||||||| ||||||||| |||| |||||||||| |||||||||||    
T  11824718 aatgttttgagggaattcaactactttgagatgaattcaaacaatataattcaccttaaagtagttgaattccctcaaaacatt 11824801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 14537320 - 14537198
Alignment:
Q  5 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaata 104  Q
    |||||||||||||||||||| || ||| ||||| |||| |    | ||||||||||||||| |||||||||  ||||||||||||||||| ||||||| |    
T  14537320 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattacctcaaaacattacattccctcaaaaca 14537221  T
Q  105 ttccgtcatccaaagacactctt 127  Q
    ||||  |||||||| ||||||||    
T  14537220 ttcccccatccaaacacactctt 14537198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 128
Target Start/End: Complemental strand, 14365775 - 14365698
Alignment:
Q  51 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 128  Q
    ||||||||||||||| |||||||||| ||||||||||||||||| ||||||| |||||  |||||||| |||||||||    
T  14365775 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 14365698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 3345867 - 3345783
Alignment:
Q  5 aatgttttgagggaattcaat-tattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    ||||||||||||||||||||  || ||||||||| ||||||||||||||||| |||| |||| |||||||||| |||||||||||    
T  3345867 aatgttttgagggaattcaacgtactttgaggtgaattcaaacaatagaatttaccttaaagtagttgaattccctcaaaacatt 3345783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 18881877 - 18881821
Alignment:
Q  159 agataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaa 215  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18881877 agataagatatgataaaactatcatatcctaattaaatttgatgtttggtgcaccaa 18881821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 128
Target Start/End: Complemental strand, 17180374 - 17180295
Alignment:
Q  49 tagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 128  Q
    ||||||||| ||||||  |||||||||| ||||||||||||||||| ||||||| ||||| ||||||||| |||||||||    
T  17180374 tagaattcatctcaaaatagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactctta 17180295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 42 - 124
Target Start/End: Original strand, 11532242 - 11532324
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 124  Q
    |||||||| ||||||||||||||| | |||||||| ||||||||||||||||| ||| |||||||||  |||||||| |||||    
T  11532242 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattccctccaaatattcccccatccaaacacact 11532324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 42 - 124
Target Start/End: Complemental strand, 11793979 - 11793897
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 124  Q
    |||||||| ||||||||||||||| | |||||||| |||| |||||||||||| |||||||||||||  |||||||| |||||    
T  11793979 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaatattcccccatccaaacacact 11793897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 41461640 - 41461512
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| |||||||||||| |||| |    | |||| |||||||||  | || ||||| ||||||||||||||||  |||||    
T  41461640 atgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattacctcaa 41461541  T
Q  101 aatattccgtcatccaaagacactcttag 129  Q
    |||||| |  |||||||| ||||| ||||    
T  41461540 aatatttccccatccaaacacactattag 41461512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 129
Target Start/End: Complemental strand, 10480203 - 10480116
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 129  Q
    |||||||| ||||||||||||||| | |||||||| |||  |||||||||||| ||||||| |||||  |||||||| ||||||||||    
T  10480203 caaacaatggaattcacctcaaagtatttgaattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 10480116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 11716483 - 11716408
Alignment:
Q  51 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    ||||||||||||||| |||||||||| ||||||||||||||||| ||||||| ||||   |||||||| |||||||    
T  11716483 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcttccatccaaacacactct 11716408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 44256232 - 44256181
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaataga 52  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  44256232 atgtaatgttttgagggaattcgattattttgaggtgaattcaaacaataga 44256181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 784918 - 784790
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || ||| ||||| |||| |    | ||||||| ||||||| |||| |||||  |||||||||||||||| |||||    
T  784918 atgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttaaattccttcaaaacattacattccctcaa 784819  T
Q  101 aatattccgtcatccaaagacactcttag 129  Q
    || |||    |||||||| ||||||||||    
T  784818 aacatttttccatccaaacacactcttag 784790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 14954343 - 14954393
Alignment:
Q  43 aaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacatt 93  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||||||||    
T  14954343 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattacatt 14954393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 17905729 - 17905651
Alignment:
Q  51 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 129  Q
    ||||||||||||||  | ||||||||  | |||||||||||||||||||||| ||||| |||||| || ||||||||||    
T  17905729 gaattcacctcaaaatatttgaattcctttaaaacattacattctctcaaaacattccctcatcctaacacactcttag 17905651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 108
Target Start/End: Complemental strand, 40026151 - 40026082
Alignment:
Q  39 attcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattcc 108  Q
    ||||||||||||||||||||||||||| | || ||||  |||||||||||| |||  |||||||||||||    
T  40026151 attcaaacaatagaattcacctcaaagtatttaaatttcctcaaaacattatattacctcaaaatattcc 40026082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 13017863 - 13017779
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    |||||||| ||||||||||||||| | |||||||| || |||| ||||||||| ||||||| ||| |  |||||||| |||||||    
T  13017863 caaacaatggaattcacctcaaagtatttgaattcccttaaaatattacattccctcaaaacatttccacatccaaacacactct 13017779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 45094460 - 45094544
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    |||||||| |||||||| | |||| |||| ||||| |||||||||||| |||| ||||||| ||||| |||| |||| |||||||    
T  45094460 caaacaatggaattcactttaaagtagttaaattccctcaaaacattatattccctcaaaacattccctcattcaaacacactct 45094544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 6457567 - 6457638
Alignment:
Q  163 aggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaa 234  Q
    ||||||||||| |||||||||||| | ||| ||| || |||||||||||||||||| ||| ||||| |||||    
T  6457567 aggatatgatagaactatcatatcatgattcaatctgttgtttggtgcaccaatagaaaatgataaattaaa 6457638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 255
Target Start/End: Complemental strand, 40054607 - 40054517
Alignment:
Q  165 gatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatccta 255  Q
    |||||||||| ||||| |||||||| || ||| |  |||||||||||||||||| ||| |||||  ||||||||||  |||| ||||||||    
T  40054607 gatatgataacactattatatcctatttaaatctcttgtttggtgcaccaatagaaaatgataaactaaacctattgttaatcctatccta 40054517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 32839637 - 32839694
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctca 99  Q
    |||||||| |||||||| |||||| | |||||||| ||||||||||||||||| ||||    
T  32839637 caaacaatggaattcacgtcaaagtatttgaattccctcaaaacattacattccctca 32839694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 30698365 - 30698289
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaa 118  Q
    ||||||||  |||||||||||| | | ||||||||  |||||||||||||||| ||||||| |||||  ||||||||    
T  30698365 caaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaa 30698289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 102
Target Start/End: Complemental strand, 740791 - 740728
Alignment:
Q  39 attcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaa 102  Q
    |||||||||||| |||||||||||||  |  ||||||| | |||||||||||||| ||||||||    
T  740791 attcaaacaataaaattcacctcaaatgatatgaattctcacaaaacattacattatctcaaaa 740728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 11595355 - 11595394
Alignment:
Q  3 gtaatgttttgagggaattcaattattttgaggtggattc 42  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  11595355 gtaatgttttgagggaattcaaatattttgaggtgaattc 11595394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 11607304 - 11607257
Alignment:
Q  43 aaacaatagaattcacctcaaagaagttgaattcgctcaaaacattac 90  Q
    ||||||| ||||||||||||||| | |||||||| |||||||||||||    
T  11607304 aaacaatggaattcacctcaaagtatttgaattccctcaaaacattac 11607257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 252
Target Start/End: Complemental strand, 16567818 - 16567767
Alignment:
Q  201 tgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatc 252  Q
    ||||||||||||||| || ||||||||| || |||||||||||||| |||||    
T  16567818 tgtttggtgcaccaacagaaaaggataagtttaacctatttctaatcctatc 16567767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 28740679 - 28740620
Alignment:
Q  43 aaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaa 102  Q
    ||||||| ||||| || |||||| | |||||||| ||||||||||||||||| |||||||    
T  28740679 aaacaatggaatttacatcaaagtatttgaattccctcaaaacattacattccctcaaaa 28740620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 38490603 - 38490532
Alignment:
Q  157 gaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataa 228  Q
    ||||| |||||| ||||||||||||||||| |  || |||||| ||||||||||  |||||| |||||||||    
T  38490603 gaagacaggataggataaaactatcatatcttgtttcaatttgttgtttggtgcgtcaatagaaaaggataa 38490532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 7167656 - 7167714
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    ||||||||  |||||||||||||| | ||||||||  |||||||||||||||| |||||    
T  7167656 caaacaatgaaattcacctcaaagtatttgaattccttcaaaacattacattccctcaa 7167714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 7228001 - 7228087
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 128  Q
    ||||||||  |||| ||||||| | | || |||||  |||||||||||||||||||||||| ||| |  |||||||| |||||||||    
T  7228001 caaacaatgaaatttacctcaaggtatttaaattccttcaaaacattacattctctcaaaacatttccccatccaaacacactctta 7228087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 8736430 - 8736476
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    |||||||| ||||||||||||||| | |||||||| |||||||||||    
T  8736430 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 8736476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 128
Target Start/End: Complemental strand, 39630308 - 39630223
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 128  Q
    ||||||||||||||| |||||||  | |||||||| ||||||||| ||||||| ||||||| ||| |  ||| |||| |||||||||    
T  39630308 caaacaatagaattcccctcaaa-tatttgaattccctcaaaacaatacattccctcaaaacatttctccattcaaacacactctta 39630223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 3045741 - 3045708
Alignment:
Q  202 gtttggtgcaccaataggaaaggataatttaaac 235  Q
    |||||||||| |||||||||||||||||||||||    
T  3045741 gtttggtgcatcaataggaaaggataatttaaac 3045708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 7670385 - 7670438
Alignment:
Q  202 gtttggtgcaccaataggaaaggataatttaaacctatttctaattctatccta 255  Q
    ||||||||||||||||| ||| ||||| || ||||| |||||||| ||||||||    
T  7670385 gtttggtgcaccaatagaaaatgataagtttaacctgtttctaatcctatccta 7670438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 11532292 - 11532251
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattc 42  Q
    |||||||||||||||||||||||| || ||||||||| ||||    
T  11532292 atgtaatgttttgagggaattcaaatactttgaggtgaattc 11532251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 11684674 - 11684711
Alignment:
Q  51 gaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  11684674 gaattcacctcaaagtagttgaattccctcaaaacatt 11684711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 17180331 - 17180364
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgag 34  Q
    |||||||||||||||||||||||| |||||||||    
T  17180331 atgtaatgttttgagggaattcaactattttgag 17180364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 27033524 - 27033565
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattc 42  Q
    |||||||||||||||||||||||| || ||||||||| ||||    
T  27033524 atgtaatgttttgagggaattcaactactttgaggtgaattc 27033565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 30751365 - 30751418
Alignment:
Q  72 aattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactc 125  Q
    ||||| |||||||||||||||| |||||||| ||||  ||||||||| ||||||    
T  30751365 aattcactcaaaacattacattatctcaaaacattctctcatccaaacacactc 30751418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 44255718 - 44255674
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaaca 86  Q
    |||||||||||||||||| ||||| | |||||||| |||||||||    
T  44255718 caaacaatagaattcaccccaaagtatttgaattctctcaaaaca 44255674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 1e-43; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 3853741 - 3853616
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||| |||||    
T  3853741 atgtaatgtttggagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattacattccctcaa 3853642  T
Q  101 aatattccgtcatccaaagacactct 126  Q
    || |||||  |||||||| |||||||    
T  3853641 aacattcccccatccaaacacactct 3853616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 3858199 - 3858074
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||| |||||    
T  3858199 atgtaatgtttggagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattacattccctcaa 3858100  T
Q  101 aatattccgtcatccaaagacactct 126  Q
    || |||||  |||||||| |||||||    
T  3858099 aacattcccccatccaaacacactct 3858074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 13404861 - 13404968
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||| ||||||||||||||||| |||||    
T  13404861 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaataaaattcatctcaaagtagttgaattccctcaaaacattacattccctcaa 13404960  T
Q  101 aatattcc 108  Q
    || |||||    
T  13404961 aacattcc 13404968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 17110903 - 17111035
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || |||||| || |||||||||||||||||||||| |||| |||||||||| ||||||||||||||||| |||||    
T  17110903 atgtaatgttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaa 17111002  T
Q  101 aatattccgtcatccaaagacactcttagggtc 133  Q
    || ||| |  |||||||| ||||||| ||||||    
T  17111003 aacatttctccatccaaacacactctaagggtc 17111035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 42740048 - 42739969
Alignment:
Q  9 ttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||| |||||||||| |||||||||||    
T  42740048 ttttgagggaattcaattattttgaggtggattctaacaataaaattcatctcaaagtagttgaattccctcaaaacatt 42739969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 14799999 - 14800119
Alignment:
Q  5 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaata 104  Q
    ||||||||||||||||| || ||||| ||||||  ||||||||||| |||||||||  ||| |||||||||| ||||||||||||| ||| |||||||||    
T  14799999 aatgttttgagggaattaaactattt-gaggtgagttcaaacaataaaattcaccttgaagtagttgaattccctcaaaacattactttccctcaaaata 14800097  T
Q  105 ttccgtcatccaaagacactct 126  Q
    ||||  |||||||| |||||||    
T  14800098 ttcccccatccaaacacactct 14800119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 33902786 - 33902667
Alignment:
Q  7 tgttttgagggaattcaat-tattttgaggtggattcaaa-caatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaata 104  Q
    ||||||||||||||||||  || ||||||||| ||||||| ||||||||||||||  |||| |||||||||| ||||||||||||||||| ||||||| |    
T  33902786 tgttttgagggaattcaaactactttgaggtgaattcaaaacaatagaattcacc--aaagtagttgaattccctcaaaacattacattccctcaaaaca 33902689  T
Q  105 ttccgtcatccaaagacactct 126  Q
    ||||  |||||||| |||||||    
T  33902688 ttcctccatccaaacacactct 33902667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 4156228 - 4156324
Alignment:
Q  28 ttttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 124  Q
    ||||||| || ||||||||||||||||||| || |||| |||||||||| ||||||||||||||||| ||||||||||||   |||||||| |||||    
T  4156228 ttttgagttgaattcaaacaatagaattcatcttaaagtagttgaattccctcaaaacattacattccctcaaaatattctcccatccaaacacact 4156324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 17110994 - 17110866
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || ||| ||||| |||| |    | ||||||| ||||||| |||||||||| ||||||||||||||||| |||||    
T  17110994 atgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaa 17110895  T
Q  101 aatattccgtcatccaaagacactcttag 129  Q
    || ||| |  |||||||| ||||||||||    
T  17110894 aacatttccccatccaaacacactcttag 17110866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 40046915 - 40046798
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||              ||||||| |||||||||| ||||||||||||||||| |||||    
T  40046915 atgtaatgttttgagggaattcaattattttgaggtggattcaa--------------ctcaaagtagttgaattccctcaaaacattacattccctcaa 40046830  T
Q  101 aatattccgtcatccaaagacactcttagggt 132  Q
    || ||||   |||||||| |||||||||||||    
T  40046829 aacattcatccatccaaacacactcttagggt 40046798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 38573433 - 38573522
Alignment:
Q  5 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattc 94  Q
    |||||||||||| ||||||| || ||| || || ||||||||||||||||||| ||||||| |||||||||  ||||||||| |||||||    
T  38573433 aatgttttgaggaaattcaactacttttagttgaattcaaacaatagaattcaactcaaagtagttgaatttcctcaaaacactacattc 38573522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 24045044 - 24044960
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    |||||||| ||||||||||||| | | ||||||||  |||||||||||||||| ||||||| ||||| ||||||||| |||||||    
T  24045044 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattccctcatccaaacacactct 24044960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 11744717 - 11744804
Alignment:
Q  41 tcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 128  Q
    |||||||||||||||||||| |||  ||||||||||  ||| |||||||||||| ||| ||||||||  ||||||||| |||||||||    
T  11744717 tcaaacaatagaattcaccttaaactagttgaattccttcacaacattacattccctctaaatattctctcatccaaacacactctta 11744804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 37268132 - 37268086
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaaca 47  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  37268132 atgtaatgttttgagggaatttaattattttgaggtggattcaaaca 37268086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 128
Target Start/End: Original strand, 42711364 - 42711441
Alignment:
Q  51 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 128  Q
    ||||||| ||||||| |||||||||| ||||||||||||||||| ||||||| |||||   ||||||| |||||||||    
T  42711364 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacattccccaatccaaacacactctta 42711441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 130
Target Start/End: Original strand, 33377296 - 33377384
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagg 130  Q
    |||||||| ||||||||| ||||| | |||||||| ||||||||| || |||| ||||||| |||||  |||||||| |||||||||||    
T  33377296 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatatattccctcaaaacattcccccatccaaacacactcttagg 33377384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 44889438 - 44889354
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    |||||||| |||||||| |||||| | |||||||| |||||||||||| |||| ||||||| |||||  |||||||| |||||||    
T  44889438 caaacaatggaattcacatcaaagtatttgaattccctcaaaacattatattccctcaaaacattcctccatccaaacacactct 44889354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 26543900 - 26543975
Alignment:
Q  163 aggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaa-ggataatttaaacct 237  Q
    |||||||||||||| |||||||||||| |  |||||  |||||||||||||||||||||| |||||| ||||||||    
T  26543900 aggatatgataaaattatcatatcctactcaaatttcttgtttggtgcaccaataggaaagggataaattaaacct 26543975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 263
Target Start/End: Original strand, 556738 - 556848
Alignment:
Q  153 ataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatc 252  Q
    ||||| ||||||||||||||||| | |||||||||| ||  ||   | ||||| ||||| |||||| ||| ||||| |||||||||||||||||  ||||    
T  556738 ataaggagataggatatgataaaccaatcatatcctgatccaaaccgctgtttcgtgcaacaatagaaaatgataaattaaacctatttctaatcatatc 556837  T
Q  253 ctaatcaccct 263  Q
    ||| |||||||    
T  556838 ctattcaccct 556848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 128
Target Start/End: Complemental strand, 23011818 - 23011732
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 128  Q
    |||||||| ||||||||||||||| | |||||||| |||| |||||||||||| ||||||| ||||   | |||||| |||||||||    
T  23011818 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattctcccgtccaaacacactctta 23011732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 263
Target Start/End: Complemental strand, 38503985 - 38503888
Alignment:
Q  165 gatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatcctaatcaccct 263  Q
    |||| |||||||||||||||||||  || |||||| ||||||||||||||| ||||||| |||| ||||||  | ||||||  |||||||| |||||||    
T  38503985 gataggataaaactatcatatcctgtttcaatttgttgtttggtgcaccaa-aggaaagaataacttaaactcacttctaaccctatcctactcaccct 38503888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 130
Target Start/End: Complemental strand, 36103185 - 36103097
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagg 130  Q
    ||||||||  ||||||| |||||| | |||||||  || |||||||||||||| ||||||| |||||  |||||||| |||||||||||    
T  36103185 caaacaatgcaattcacatcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacacactcttagg 36103097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 13404952 - 13404829
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || |||||| || |||  |    | |||| |||||||||  | |||||||| ||||||||||||||||  |||||    
T  13404952 atgtaatgttttgagggaattcaactactttgagatgaattttattgtttgaatccacctcaaaataattgaattccctcaaaacattacattacctcaa 13404853  T
Q  101 aatattccgtcatccaaagacact 124  Q
    |||||| |  |||||||| |||||    
T  13404852 aatatttccccatccaaacacact 13404829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 9028742 - 9028688
Alignment:
Q  201 tgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatccta 255  Q
    ||||||||||||||| |  |||||||||||||||||||||| |||| ||||||||    
T  9028742 tgtttggtgcaccaacataaaaggataatttaaacctatttttaatcctatccta 9028688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 213 - 255
Target Start/End: Original strand, 11066502 - 11066544
Alignment:
Q  213 caataggaaaggataatttaaacctatttctaattctatccta 255  Q
    |||||||||||||||| ||||||||||||||||| ||||||||    
T  11066502 caataggaaaggataacttaaacctatttctaatcctatccta 11066544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 129
Target Start/End: Complemental strand, 33986087 - 33986001
Alignment:
Q  43 aaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 129  Q
    |||||||  |||||||||||||| | |||||||| ||||||||||||||||   |||| | |||||  |||||||| ||||||||||    
T  33986087 aaacaatgaaattcacctcaaagtatttgaattctctcaaaacattacattacttcaagacattcccccatccaaacacactcttag 33986001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 123
Target Start/End: Original strand, 35979003 - 35979084
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacac 123  Q
    |||||||| ||||||||||||||| | |||||||| |||  || ||||||||| ||||||| |||||  |||||||| ||||    
T  35979003 caaacaatggaattcacctcaaagtatttgaattccctcttaagattacattccctcaaaacattcctccatccaaacacac 35979084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 15186816 - 15186876
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaa 102  Q
    ||||||||||||||||||| |||  | |||||||  |||||||||||||||| ||||||||    
T  15186816 caaacaatagaattcaccttaaactatttgaatttactcaaaacattacattatctcaaaa 15186876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 28324661 - 28324745
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    ||||||||  |||||| ||||| | | ||||||||  |||||||||||||||| ||||||| |||||  |||||||| |||||||    
T  28324661 caaacaatgtaattcagctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcctccatccaaacacactct 28324745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 14321 - 14235
Alignment:
Q  43 aaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagg 130  Q
    |||||||  |||||||| ||||| | |||||||| || |||||||||||||| ||| ||| |||||  |||||||| |||||||||||    
T  14321 aaacaatgaaattcaccccaaagtatttgaattcccttaaaacattacattccctccaaacattcc-ccatccaaacacactcttagg 14235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 93
Target Start/End: Complemental strand, 13144667 - 13144616
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacatt 93  Q
    |||||||| ||||||||||||||| | |||||||| |||| |||||||||||    
T  13144667 caaacaatggaattcacctcaaagtatttgaattccctcataacattacatt 13144616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 30435280 - 30435365
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    ||||||||||| ||||||||| || || |||||| || ||| ||||||||||||| |||| |||  |||||||||| |||||||||||    
T  30435280 atgtaatgtttggagggaatttaacta-tttgagttgaatttaaacaatagaatttaccttaaa-tagttgaattccctcaaaacatt 30435365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 31807467 - 31807409
Alignment:
Q  67 agttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    |||||||||| ||||||||||||||||| ||||||| ||||  ||||||||| |||||||    
T  31807467 agttgaattccctcaaaacattacattc-ctcaaaacattctctcatccaaacacactct 31807409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 1088276 - 1088362
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 128  Q
    |||||||| ||||| ||| ||||  | |||||||  ||||||||| ||||||||||||||| |||||  || ||||| |||||||||    
T  1088276 caaacaatggaatttaccccaaaatatttgaatttcctcaaaacaatacattctctcaaaacattcctccacccaaacacactctta 1088362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 108
Target Start/End: Complemental strand, 8049338 - 8049272
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattcc 108  Q
    ||||||||  |||| ||||||||| | |||||||| |||||||||||| |||| ||||||| |||||    
T  8049338 caaacaatgaaatttacctcaaagtatttgaattccctcaaaacattatattccctcaaaacattcc 8049272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 22573142 - 22573196
Alignment:
Q  201 tgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatccta 255  Q
    ||||||||||||||| |||||| ||||| || ||||| |||||||| ||||||||    
T  22573142 tgtttggtgcaccaacaggaaatgataagtttaacctgtttctaatcctatccta 22573196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 26520438 - 26520484
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    |||||||| ||||||||||||||| | |||||||| |||||||||||    
T  26520438 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 26520484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 30444932 - 30444978
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    |||||||| ||||||||||||||| | |||||||| |||||||||||    
T  30444932 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 30444978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 34008865 - 34008819
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    |||||||| ||||||||||||||| | |||||||| |||||||||||    
T  34008865 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 34008819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 31734323 - 31734364
Alignment:
Q  201 tgtttggtgcaccaataggaaaggataatttaaacctatttc 242  Q
    ||||||||||||||||| |||| ||||| |||||||||||||    
T  31734323 tgtttggtgcaccaataagaaatgataaattaaacctatttc 31734364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 246
Target Start/End: Original strand, 40028781 - 40028874
Alignment:
Q  153 ataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaat 246  Q
    ||||| ||| |||||||||| ||| |||||||||||   | ||| || |||||||||| |||| |||||| ||||| || ||||| ||||||||    
T  40028781 ataaggagacaggatatgattaaaatatcatatcctgcctcaatctgttgtttggtgcgccaacaggaaatgataactttaacctttttctaat 40028874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 515531 - 515615
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    ||||||||  ||||||| |||||| | ||||| || || ||||||||||||||  |||||| |||||  |||||||| |||||||    
T  515531 caaacaatgaaattcacatcaaagtatttgaactcccttaaaacattacattccttcaaaacattcctccatccaaacacactct 515615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 3346397 - 3346477
Alignment:
Q  153 ataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaa 233  Q
    |||| ||||||  ||||||||||| |||| |||||||||| ||||   |||||||||||| ||||| ||| ||||| ||||    
T  3346397 ataacaagataaaatatgataaaattatcctatcctaattaaattcattgtttggtgcactaatagaaaaagataaattaa 3346477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 7202921 - 7202885
Alignment:
Q  52 aattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    |||||||||||||| |||||||||| |||||||||||    
T  7202921 aattcacctcaaagtagttgaattccctcaaaacatt 7202885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 3e-41; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 9763137 - 9763036
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||    
T  9763137 atgtaatgttttgagggaattcaattattgtgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaa 9763038  T
Q  101 aa 102  Q
    ||    
T  9763037 aa 9763036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 9285768 - 9285647
Alignment:
Q  5 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaata 104  Q
    |||||||||||||||||||| || |||||| || ||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||| ||||||| |    
T  9285768 aatgttttgagggaattcaactactttgagatgaattcaaacaatagaattcagctcaaagtagttgaattccctcaaaacattacattccctcaaaaca 9285669  T
Q  105 ttccgtcatccaaagacactct 126  Q
    ||||  |||||||| |||||||    
T  9285668 ttcccccatccaaacacactct 9285647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 6919742 - 6919873
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| |||   ||||||||| ||||||||||||| ||| |||||    
T  6919742 atgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaa-tggttgaattccctcaaaacattactttccctcaa 6919840  T
Q  101 aatattccgtcatccaaagacactcttagggtc 133  Q
    || |||||  |||||||| ||||||||||||||    
T  6919841 aacattcccccatccaaacacactcttagggtc 6919873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 776114 - 776215
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||| ||||||| || ||| || |  |||||||||||||||||||||| |||| |||||||||  ||||||||||||||||| |||||    
T  776114 atgtaatgttttgaggaaattcaactactttaagttaaattcaaacaatagaattcaccttaaagtagttgaatttcctcaaaacattacattccctcaa 776213  T
Q  101 aa 102  Q
    ||    
T  776214 aa 776215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 9763046 - 9763173
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || ||||||||| |||| |    | |||| ||||||| |  | |||||||| ||||||||||||||||  |||||    
T  9763046 atgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcacaataattgaattccctcaaaacattacattacctcaa 9763145  T
Q  101 aatattccgtcatccaaagacactctta 128  Q
    ||||||||  |||||||| |||||||||    
T  9763146 aatattcctccatccaaacacactctta 9763173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 1368561 - 1368477
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    |||||||||||||||||||||||  | |||||||| || |||| ||||||||||||||||| |||||  |||||||| |||||||    
T  1368561 caaacaatagaattcacctcaaaacatttgaattcccttaaaatattacattctctcaaaacattcctccatccaaacacactct 1368477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 132
Target Start/End: Original strand, 34244969 - 34245059
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagggt 132  Q
    |||||||| ||||| || |||||| | |||||||| ||||||||||||||||| ||||||| |||||  |||||||| ||||||| |||||    
T  34244969 caaacaatggaatttacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctaagggt 34245059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 6919783 - 6919710
Alignment:
Q  51 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 124  Q
    ||||||||||||||| |||||||||| ||||||||||||||||| ||||||  |||||  |||||||| |||||    
T  6919783 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaccattcctccatccaaacacact 6919710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 129
Target Start/End: Complemental strand, 28918249 - 28918162
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 129  Q
    ||||||||  |||||||||||||| | |||||||  || |||||||||||||| ||||||| |||||  |||||||| ||||||||||    
T  28918249 caaacaatgaaattcacctcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacacactcttag 28918162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 15299471 - 15299417
Alignment:
Q  54 ttcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattcc 108  Q
    |||||||||||| |||||||||| ||||||||||||||||| ||||||| |||||    
T  15299471 ttcacctcaaagtagttgaattctctcaaaacattacattcgctcaaaacattcc 15299417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 132
Target Start/End: Original strand, 29889423 - 29889513
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagggt 132  Q
    |||| ||| |||||||| |||||| | |||||||| |||||||||||||||||  |||||| |||||  |||||||| ||||||| |||||    
T  29889423 caaataatggaattcacatcaaagtatttgaattccctcaaaacattacattccatcaaaacattcctccatccaaacacactctaagggt 29889513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 18596772 - 18596691
Alignment:
Q  165 gatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaat 246  Q
    |||||||||||||||||||||| | ||| ||||||||||| | || || | || |||| |||||||||||||||||| ||||    
T  18596772 gatatgataaaactatcatatcttgattcaatttgatgttcgatgtactagtaagaaatgataatttaaacctatttttaat 18596691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 8574760 - 8574828
Alignment:
Q  62 aaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagg 130  Q
    |||| |||||||||| ||||||||||||||||| ||||||| ||| |  |||||||| |||||||||||    
T  8574760 aaagtagttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacacactcttagg 8574828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 15299510 - 15299566
Alignment:
Q  52 aattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattcc 108  Q
    |||||||||||||| ||||||||||  |||||||||||||||| ||||||| |||||    
T  15299510 aattcacctcaaagtagttgaattccttcaaaacattacattccctcaaaacattcc 15299566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 8574759 - 8574689
Alignment:
Q  62 aaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagggt 132  Q
    |||| |||||||||| ||||||||||||||||| ||||||| ||| |  |||||||| ||||||| |||||    
T  8574759 aaagtagttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacacactctaagggt 8574689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 8547542 - 8547481
Alignment:
Q  202 gtttggtgcaccaataggaaaggataatttaaacctatttctaattctatcctaatcaccct 263  Q
    |||||| ||| |||||||||||||||| |||||||||||||||||  |||| || |||||||    
T  8547542 gtttggagcatcaataggaaaggataacttaaacctatttctaatcttatcatattcaccct 8547481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 13487359 - 13487275
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    ||||||||  |||||||||||||| | |||||||| |||| |||| ||||||| ||||||| |||||  |||| ||| |||||||    
T  13487359 caaacaatgaaattcacctcaaagtatttgaattccctcataacactacattccctcaaaacattcccccatctaaacacactct 13487275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 6358237 - 6358300
Alignment:
Q  39 attcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaa 102  Q
    |||| |||||||||||||||| ||||| | || ||||| ||||||||||||||||  |||||||    
T  6358237 attctaacaatagaattcaccacaaagtatttaaattctctcaaaacattacattacctcaaaa 6358300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 14228030 - 14227943
Alignment:
Q  153 ataagaagataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatt 240  Q
    ||||||||| | ||||||||||||||||| ||||||| || |||  | ||||||| |  || |||||||| ||||| |||||||||||    
T  14228030 ataagaagacatgatatgataaaactatcttatcctatttcaatccgttgtttggagtgccgataggaaatgataacttaaacctatt 14227943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 8573895 - 8573834
Alignment:
Q  202 gtttggtgcaccaataggaaaggataatttaaacctatttctaattctatcctaatcaccct 263  Q
    |||||| ||| |||||||||| ||||| |||||||||||||||||  |||| || |||||||    
T  8573895 gtttggagcatcaataggaaatgataacttaaacctatttctaatcttatcatattcaccct 8573834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 34364827 - 34364770
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctca 99  Q
    |||||||| ||||||||||||||| | || ||||| |||| |||||||||||| ||||    
T  34364827 caaacaatggaattcacctcaaagtatttaaattccctcataacattacattccctca 34364770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 3e-38; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 9764463 - 9764335
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || |||||||||  ||||||||||||||||||||| |||| |||||||||| ||||||||||||| ||| |||||    
T  9764463 atgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttccctcaa 9764364  T
Q  101 aatattccgtcatccaaagacactcttag 129  Q
    ||||||||  |||||||| ||||||||||    
T  9764363 aatattcccccatccaaacacactcttag 9764335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 15373994 - 15374121
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| | || |||||||||| ||||||||||||||||| |||||    
T  15373994 atgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttagagtagttgaattccctcaaaacattacattccctcaa 15374093  T
Q  101 aatattccgtcatccaaagacactctta 128  Q
    || |||||  |||||||| |||||||||    
T  15374094 aacattcccccatccaaacacactctta 15374121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 20523167 - 20523291
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    ||||||| || ||||||||||||| || ||||||||| |||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||    
T  20523167 atgtaatattctgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattctctcaa 20523266  T
Q  101 aatattccgtcatccaaagacactc 125  Q
    || |||||  |||||||| ||||||    
T  20523267 aacattcccccatccaaacacactc 20523291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 2316504 - 2316376
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacc-tcaaagaagttgaattcgctcaaaacattacattctctca 99  Q
    ||||||||||||||| |||||||| || ||||||||| ||||||||||||||||||||| | |||| |||||||||| ||||||| ||||||||| ||||    
T  2316504 atgtaatgttttgagagaattcaactactttgaggtgaattcaaacaatagaattcacctttaaagtagttgaattccctcaaaatattacattccctca 2316405  T
Q  100 aaatattccgtcatccaaagacactctta 128  Q
    ||| |||||  |||||||| |||||||||    
T  2316404 aaacattcccccatccaaacacactctta 2316376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 32390097 - 32389974
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || ||||||||| ||||||| |||||||||||||| | || |||||||||| ||||||| |||||||||  ||||    
T  32390097 atgtaatgttttgagggaattcaactactttgaggtgaattcaaataatagaattcaccttagagtagttgaattccctcaaaatattacattccttcaa 32389998  T
Q  101 aatattccgtcatccaaagacact 124  Q
    || ||||| ||||||||| |||||    
T  32389997 aacattccctcatccaaacacact 32389974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 40643856 - 40643980
Alignment:
Q  5 aatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaata 104  Q
    |||||||||||||||||||| || |||||| |  |||||||||||||||||||||| ||| | ||||||||| ||||||||||||||||| ||||||| |    
T  40643856 aatgttttgagggaattcaactactttgagttaaattcaaacaatagaattcaccttaaata-gttgaattccctcaaaacattacattccctcaaaaca 40643954  T
Q  105 ttccgtcatccaaagacactcttagg 130  Q
    ||||  |||||||| |||||||||||    
T  40643955 ttcccccatccaaacacactcttagg 40643980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 40809378 - 40809476
Alignment:
Q  4 taatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaa 102  Q
    ||||||||||||||||||||| || |||||| || |||||||||||| ||||||||| |||| || ||||||| |||||||||||||||||||||||||    
T  40809378 taatgttttgagggaattcaactactttgagttgaattcaaacaataaaattcaccttaaagtagctgaattcactcaaaacattacattctctcaaaa 40809476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 32471007 - 32470878
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || |||||| || ||||||| ||||||||| |||| |||  ||||||||||  |||||||||||||||| |||||    
T  32471007 atgtaatgttttgagggaattcaactactttgagttgaattcaaataatagaatttaccttaaaatagttgaattccttcaaaacattacattccctcaa 32470908  T
Q  101 aatattccgtcatccaaagacactcttagg 130  Q
    || ||| |  |||||||| |||||||||||    
T  32470907 aacatttctccatccaaatacactcttagg 32470878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 6634049 - 6634170
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||| ||||||| ||  | |||| ||||||||| ||| |    
T  6634049 atgtaatgttttgagggaattcaattatttcgag-tgaattcaaacaatagaattcacctcaaagtagttgaactcctttaaaatattacattccctcga 6634147  T
Q  101 aatattccgtcatccaaagacac 123  Q
    ||| ||||  |||||||| ||||    
T  6634148 aatgttcccccatccaaacacac 6634170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 28828472 - 28828417
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattc 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28828472 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattc 28828417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 133
Target Start/End: Original strand, 37722880 - 37722971
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagggtc 133  Q
    |||||||| ||||||||||||||| | |||||||| ||||||||||||||||| |||||||||||||  |||||||| ||||||| ||||||    
T  37722880 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattccctcaaaatattcccccatccaaacacactctaagggtc 37722971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 16515099 - 16515180
Alignment:
Q  48 atagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 129  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| || |||| ||||  ||||||||| ||||||||||    
T  16515099 atagaattcacctcaaagaagttgaattccctcaaaacattacattccctaaaaacattctctcatccaaacacactcttag 16515180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 32390006 - 32390134
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    ||||||| |||||||||||||||| || | | ||||| |||| |  | | ||||||||||||||| |||||||||| ||||||||||||||||| |||||    
T  32390006 atgtaatattttgagggaattcaactactctaaggtgaattctattatttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaa 32390105  T
Q  101 aatattccgtcatccaaagacactcttag 129  Q
    || ||||  | ||||||| ||||||||||    
T  32390106 aaaattctctaatccaaacacactcttag 32390134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 23092087 - 23091980
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||| ||||| || ||| || || ||||| | ||||||||||| || |||| ||||||||||  |||||||||||||||| |||||    
T  23092087 atgtaatgttttgagggagttcaactactttcagatgaattcagaaaatagaattcaacttaaagtagttgaattccttcaaaacattacattccctcaa 23091988  T
Q  101 aatattcc 108  Q
    ||||||||    
T  23091987 aatattcc 23091980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 15374085 - 15373960
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || | | ||||| |||| |    | ||||||||||||||| |||||||||| ||||||||||||||||| |||||    
T  15374085 atgtaatgttttgagggaattcaactactctaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaa 15373986  T
Q  101 aatattccgtcatccaaagacactct 126  Q
    || ||||   |||||||| |||||||    
T  15373985 aaaattcttccatccaaacacactct 15373960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 34731234 - 34731330
Alignment:
Q  159 agataggatatgataaaactatcatatcctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaattctatccta 255  Q
    |||||||||||||||| |||||||||||||| || |||    ||||||||||||||||||||||||||||  ||||||||||  |||| ||||||||    
T  34731234 agataggatatgataacactatcatatcctatttaaatcccttgtttggtgcaccaataggaaaggataaactaaacctattgttaatcctatccta 34731330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 9764374 - 9764497
Alignment:
Q  3 gtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaa 102  Q
    |||||||||||||||||||||| || ||| ||||| |||| |    | ||| ||||||||||| |||||||||| ||||||||||||||||| ||| |||    
T  9764374 gtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaaagtagttgaattccctcaaaacattacattccctcgaaa 9764473  T
Q  103 tattccgtcatccaaagacactct 126  Q
     |||||  |||||||| |||||||    
T  9764474 cattcccccatccaaacacactct 9764497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 39 - 125
Target Start/End: Complemental strand, 3563364 - 3563278
Alignment:
Q  39 attcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactc 125  Q
    |||||| ||||||||||||||| |||| |||||||||| ||||||||||||||||| ||||||| |||||   ||||||| ||||||    
T  3563364 attcaagcaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccctatccaaacacactc 3563278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 20523258 - 20523133
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || ||| ||||| |||| |    | ||||||||||||||| |||||||||| |||| || ||||||||| |||||    
T  20523258 atgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattccctcagaatattacattccctcaa 20523159  T
Q  101 aatattccgtcatccaaagacactct 126  Q
    || ||||   |||||||| |||||||    
T  20523158 aacattctcccatccaaacacactct 20523133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 22767036 - 22766952
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    ||||||||||||||||||| |||| | |||||||| |||||||||||| |||| ||||||| |||||  |||||||| |||||||    
T  22767036 caaacaatagaattcaccttaaagtatttgaattccctcaaaacattatattccctcaaaacattcccccatccaaacacactct 22766952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 131
Target Start/End: Complemental strand, 40809416 - 40809336
Alignment:
Q  51 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttaggg 131  Q
    ||||||| ||||||| |||||||||| |||||||||||| |||||||||||| ||| |  |||||||| ||||||||||||    
T  40809416 gaattcaactcaaagtagttgaattccctcaaaacattatattctctcaaaacatttccccatccaaacacactcttaggg 40809336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 124
Target Start/End: Original strand, 2721557 - 2721628
Alignment:
Q  53 attcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 124  Q
    ||||||||||||| |||||||||| ||||||||||||||||| ||||||| |||||  |||||||| |||||    
T  2721557 attcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 2721628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 25935276 - 25935363
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 129  Q
    |||||||| ||||||||||||||| | |||||||  |||| |||||||||||| ||||||| |||||  |||||||| ||||||||||    
T  25935276 caaacaatggaattcacctcaaagtatttgaatttcctcataacattacattccctcaaaacattcccccatccaaacacactcttag 25935363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 32470916 - 32471015
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||| ||||||||| |||||| ||||  |||| |  | | ||||||| ||||||| |||||||||| ||||||||||||||||| |||||    
T  32470916 atgtaatgttttgaaggaattcaactattttaaggtaaattctattatttgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaa 32471015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 40090400 - 40090487
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 129  Q
    |||||||| ||||||||||||||| | ||||||||  |||||||||||||||  ||||||| |||||  |||||||| ||||||||||    
T  40090400 caaacaatggaattcacctcaaagtatttgaattccatcaaaacattacatttcctcaaaacattcccccatccaaacacactcttag 40090487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 16515081 - 16515023
Alignment:
Q  49 tagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattc 107  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| ||||||| ||||    
T  16515081 tagaattcacctcaaagaagttgaattccctcaaaaccttacattccctcaaaacattc 16515023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 26281262 - 26281339
Alignment:
Q  49 tagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    |||||||||||| |||| |||||||||| ||||||||||||||||| |||||||  ||||  |||||||| |||||||    
T  26281262 tagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacgttcccccatccaaacacactct 26281339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 35379423 - 35379344
Alignment:
Q  46 caatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    ||||| ||||||| |||||||| |||||||| |||||||||||||||| |||||||| |||||  |||||||| |||||||    
T  35379423 caataaaattcacttcaaagaatttgaattccctcaaaacattacattatctcaaaacattcc-ccatccaaacacactct 35379344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 130
Target Start/End: Original strand, 41762201 - 41762289
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagg 130  Q
    |||||||| ||||||||| ||||| | |||||||| || |||||| ||||||| ||||||| |||||  |||||||| |||||||||||    
T  41762201 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactcttagg 41762289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 2316463 - 2316514
Alignment:
Q  51 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaa 102  Q
    ||||||||||||||| |||||||||| ||||||||||||||||| |||||||    
T  2316463 gaattcacctcaaagtagttgaattctctcaaaacattacattccctcaaaa 2316514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 124
Target Start/End: Original strand, 19533893 - 19533975
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 124  Q
    ||||||||  |||||||||||||| | |||||||| |||| |||||||||||| ||||||| |||||  |||||||| |||||    
T  19533893 caaacaatgaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcctccatccaaacacact 19533975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 22303856 - 22303940
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    ||||||||  |||||||||||| | | ||||||||  |||||||||||||||| ||||||| |||||  |||||||| |||||||    
T  22303856 caaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactct 22303940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 37145487 - 37145563
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaa 118  Q
    ||||||||  |||||||||||||| | |||||||| |||| |||||||||||| ||||||| |||||  ||||||||    
T  37145487 caaacaatgaaattcacctcaaagtatttgaattctctcataacattacattccctcaaaacattcccccatccaaa 37145563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 22305178 - 22305132
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    |||||||| ||||||||||||||| |||||||||| |||||||||||    
T  22305178 caaacaatggaattcacctcaaagtagttgaattccctcaaaacatt 22305132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 32250084 - 32250169
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 128  Q
    |||||||| ||||||| ||||| | | |||||||| ||||||||||||| ||| ||||||| |||||  |||||||| |||||||||    
T  32250084 caaacaatggaattcatctcaaggtatttgaattccctcaaaacattactttccctcaaaacattcc-ccatccaaacacactctta 32250169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 15270837 - 15270886
Alignment:
Q  39 attcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    ||||||||||| ||||||||||||||| | |||||||| |||||||||||    
T  15270837 attcaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 15270886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 17542344 - 17542393
Alignment:
Q  39 attcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    ||||||||||| ||||||||||||||| | |||||||| |||||||||||    
T  17542344 attcaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 17542393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 128
Target Start/End: Original strand, 23092046 - 23092123
Alignment:
Q  51 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 128  Q
    ||||||| || |||| ||||||| || |||||||||||||||||  |||||| |||||  |||||||| |||||||||    
T  23092046 gaattcatctgaaagtagttgaactccctcaaaacattacattcgttcaaaacattcccccatccaaacacactctta 23092123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 129
Target Start/End: Complemental strand, 6634072 - 6634012
Alignment:
Q  69 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttag 129  Q
    |||||||| ||||||||||||||||  |||||||||| ||  |||||||| ||||||||||    
T  6634072 ttgaattccctcaaaacattacattacctcaaaatatccccccatccaaacacactcttag 6634012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 9894308 - 9894384
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaa 118  Q
    |||||||| ||||||||||||||| | |||||||| ||   |||||||||||| ||||||| |||||  ||||||||    
T  9894308 caaacaatggaattcacctcaaagtatttgaattccctggtaacattacattccctcaaaacattcccccatccaaa 9894384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 13243514 - 13243451
Alignment:
Q  71 gaattcgctcaaaacattacattctctcaaaatattccgtcatc--caaagacactcttagggt 132  Q
    |||||| ||||||||||||||||| ||||||| ||||| |||||  |||| |||||||||||||    
T  13243514 gaattccctcaaaacattacattccctcaaaacattccctcatccacaaacacactcttagggt 13243451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 246
Target Start/End: Complemental strand, 32529534 - 32529439
Alignment:
Q  153 ataagaagataggatatgataaaactatcatat--cctaatttaatttgatgtttggtgcaccaataggaaaggataatttaaacctatttctaat 246  Q
    ||||||||| | |||||||||||||||||||||  | || || |||  | |||||||||||||||||  |||| |||| |||||| ||||||||||    
T  32529534 ataagaagacaagatatgataaaactatcatatatcttacttcaatccgctgtttggtgcaccaataaaaaagaataaattaaacttatttctaat 32529439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 33245366 - 33245446
Alignment:
Q  50 agaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagg 130  Q
    |||||||| || |||| |||||||||  |||||||||||||||||  |||||| |||||  |||||||| |||||| ||||    
T  33245366 agaattcaacttaaagtagttgaattttctcaaaacattacattccatcaaaacattcccccatccaaacacactcatagg 33245446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 133
Target Start/End: Complemental strand, 34982288 - 34982209
Alignment:
Q  53 attcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagggtc 133  Q
    |||||||| ||||  ||||||||| |||||||||| |||||| ||||||| |||||   ||||||| ||||||||||||||    
T  34982288 attcaccttaaagtggttgaattccctcaaaacat-acattccctcaaaacattcccctatccaaacacactcttagggtc 34982209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 33146257 - 33146211
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    |||||||| ||||||||||||||| | |||||||| |||||||||||    
T  33146257 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 33146211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 28490076 - 28490031
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacat 87  Q
    |||||||| ||||||||||||||| | |||||||| ||||||||||    
T  28490076 caaacaatggaattcacctcaaagtatttgaattccctcaaaacat 28490031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 28828431 - 28828504
Alignment:
Q  51 gaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 124  Q
    |||| |||||||||  | |||||||| ||||||||||||||||  ||||||||||| |  |||||||| |||||    
T  28828431 gaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatatttccccatccaaacacact 28828504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 37722930 - 37722889
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattc 42  Q
    |||||||||||||||||||||||| || ||||||||| ||||    
T  37722930 atgtaatgttttgagggaattcaaatactttgaggtgaattc 37722889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 2550384 - 2550348
Alignment:
Q  52 aattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    |||||||||||||| |||||||||| |||||||||||    
T  2550384 aattcacctcaaagtagttgaattccctcaaaacatt 2550348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 2721596 - 2721560
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtg 37  Q
    |||||||||||||||||||||||| || |||||||||    
T  2721596 atgtaatgttttgagggaattcaactactttgaggtg 2721560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 56308 - 56425
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || |||||||||  ||||||||||||||||||||| |||| |||||||||| ||||||||||||| ||| |||||    
T  56308 atgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttccctcaa 56407  T
Q  101 aatattccgtcatccaaa 118  Q
    |||||||| |||||||||    
T  56408 aatattccctcatccaaa 56425  T

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Target: scaffold0044; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 56397 - 56306
Alignment:
Q  3 gtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattc 94  Q
    |||||||||||||||||||||| || ||| ||||| |||| |    | ||| ||||||||||| |||||||||| |||||||||||||||||    
T  56397 gtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaaagtagttgaattccctcaaaacattacattc 56306  T

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Target: scaffold1562 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 530 - 402
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || |||||||||  ||||||||||||||||||||   ||| |||||||||| ||||||||||||  ||| |||||    
T  530 atgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccctgaagtagttgaattccctcaaaacattattttccctcaa 431  T
Q  101 aatattccgtcatccaaagacactcttag 129  Q
    ||||||||  |||||||| ||||||||||    
T  430 aatattcccccatccaaacacactcttag 402  T

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Target: scaffold1562; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 493 - 562
Alignment:
Q  55 tcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 124  Q
    ||||||||||| |||||||||| ||||||||||||||||| ||||||| |||||  |||||||| |||||    
T  493 tcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 562  T

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Target: scaffold1158 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 2063 - 2191
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaa 100  Q
    |||||||||||||||||||||||| || |||||||||  ||||||||||||||||||||   ||| |||||||||| ||||||||||||  ||| |||||    
T  2063 atgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccctgaagtagttgaattccctcaaaacattattttccctcaa 2162  T
Q  101 aatattccgtcatccaaagacactcttag 129  Q
    ||||||||  |||||||| ||||||||||    
T  2163 aatattcccccatccaaacacactcttag 2191  T

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Target: scaffold1158; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 2100 - 2031
Alignment:
Q  55 tcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 124  Q
    ||||||||||| |||||||||| ||||||||||||||||| ||||||| |||||  |||||||| |||||    
T  2100 tcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 2031  T

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Target: scaffold0169 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 130
Target Start/End: Complemental strand, 4159 - 4071
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttagg 130  Q
    |||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||| ||||| | ||||||| |||||||||||    
T  4159 caaacaatagaattcacctcaaagtatttgaattccctcaaaacattacattctctcaaaacattcctttatccaaacacactcttagg 4071  T

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Target: scaffold0169; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 4109 - 4150
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattc 42  Q
    |||||||||||||||||||||||| || ||||||||| ||||    
T  4109 atgtaatgttttgagggaattcaaatactttgaggtgaattc 4150  T

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Target: scaffold0009 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 42076 - 41997
Alignment:
Q  47 aatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||| |||||  ||| |||| |||||||    
T  42076 aatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacacactct 41997  T

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Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 42080 - 42139
Alignment:
Q  69 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactctta 128  Q
    |||||||| ||||||||||||||||| |||||||  ||||  |||||||| |||||||||    
T  42080 ttgaattctctcaaaacattacattccctcaaaacgttcccccatccaaacacactctta 42139  T

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Target: scaffold0009; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 42031 - 42072
Alignment:
Q  1 atgtaatgttttgagggaattcaattattttgaggtggattc 42  Q
    |||||||||||||||||||||||| || ||||||||| ||||    
T  42031 atgtaatgttttgagggaattcaactactttgaggtgaattc 42072  T

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Target: scaffold0048 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 83025 - 82945
Alignment:
Q  44 aacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacact 124  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||||| ||||||| ||||   |||||||| |||||    
T  83025 aacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcacccatccaaacacact 82945  T

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Target: scaffold0129 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 131
Target Start/End: Complemental strand, 19280 - 19193
Alignment:
Q  43 aaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactcttaggg 131  Q
    ||||||| ||||||||||||||  | |||||||| ||||||||||||||||| ||||||||| |||  |||||||| ||||| ||||||    
T  19280 aaacaatggaattcacctcaaaatatttgaattc-ctcaaaacattacattccctcaaaatactcccccatccaaacacacttttaggg 19193  T

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Target: scaffold0318 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 2950 - 2867
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactct 126  Q
    |||||||| |||||||||||||| |  |||||||| ||||||||||||||||||||| ||| |||||  |||| ||| |||||||    
T  2950 caaacaatggaattcacctcaaatat-ttgaattccctcaaaacattacattctctcgaaacattcccccatctaaacacactct 2867  T

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Target: scaffold0400 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 4487 - 4570
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactc 125  Q
    |||||||| ||||||||| ||||  | |||||||  |||||||||||| |||| ||||||| ||||| ||||||||| ||||||    
T  4487 caaacaatggaattcaccccaaaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacacactc 4570  T

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Target: scaffold0365 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 5131 - 5214
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaagacactc 125  Q
    |||||||| ||||||||| ||||  | |||||||  |||||||||||| |||| ||||||| ||||| ||||||||| ||||||    
T  5131 caaacaatggaattcaccccaaaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacacactc 5214  T

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Target: scaffold0240 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 17561 - 17620
Alignment:
Q  29 tttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 88  Q
    |||||||||||  ||||||||| ||| |||||||||| |||||||||| |||||||||||    
T  17561 tttgaggtggaaccaaacaataaaatgcacctcaaaggagttgaattccctcaaaacatt 17620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 107
Target Start/End: Complemental strand, 10970 - 10905
Alignment:
Q  42 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattc 107  Q
    |||||||| |||||||| |||||| | |||||||| ||||||||||||||||| || |||| ||||    
T  10970 caaacaatggaattcacgtcaaagtatttgaattccctcaaaacattacattcccttaaaacattc 10905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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