View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16991_high_49 (Length: 250)
Name: NF16991_high_49
Description: NF16991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16991_high_49 |
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Alignment Details
Target: chr7 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 120 - 230
Target Start/End: Original strand, 30277700 - 30277814
Alignment:
| Q |
120 |
gcaactaattaatgtta--aataag-gaatatttta-tatctataagatgattnnnnnnnctcttagtggagtactattgtgtagctagctgcacctcat |
215 |
Q |
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| T |
30277700 |
gcaactaattaatgttataaataaaagaatatttaaatatctataagatgattaaaaaaactcttagtggagtactattgtgtagctagctgcacctcat |
30277799 |
T |
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| Q |
216 |
tcttaatttattccg |
230 |
Q |
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||||||||||||||| |
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| T |
30277800 |
tcttaatttattccg |
30277814 |
T |
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