View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16991_high_62 (Length: 236)
Name: NF16991_high_62
Description: NF16991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16991_high_62 |
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Alignment Details
Target: chr6 (Bit Score: 164; Significance: 9e-88; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 32824517 - 32824736
Alignment:
| Q |
1 |
aataaaatatttaaaacaatatatataaatctcaattgcttacacacaccaaacacaaacatctatcaattattatccacaaacatcatgttaataaaca |
100 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
32824517 |
aataaaatatttaaaacaatatatataaatcttaattgcttacacacaccaaacacaaacatctatcaattattatccacaaacatcatgtcaataaaca |
32824616 |
T |
|
| Q |
101 |
atgaaaatcaactcaagnnnnnnnnnnnnnnnntgttaaataatcatagagactaattaacaagttaagaaacataaagaaaatcaaaacctctcacact |
200 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32824617 |
atgaaaatcaactcaagaaaaaaattaaaaaaatgttaaataatcatagagactaattaacaagttaagaaacataaagaaaatcaaaacctctcacact |
32824716 |
T |
|
| Q |
201 |
gatctgagtacatttccatg |
220 |
Q |
| |
|
|||||||||||||||||||| |
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| T |
32824717 |
gatctgagtacatttccatg |
32824736 |
T |
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