View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16991_high_66 (Length: 213)
Name: NF16991_high_66
Description: NF16991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16991_high_66 |
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Alignment Details
Target: chr7 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 21 - 197
Target Start/End: Original strand, 48634792 - 48634964
Alignment:
| Q |
21 |
taacatacaacattaattaaagtttcccttggtcacttcacttgcatatgcctgcctgatcaagtagctcaggaaaggnnnnnnnngagcagcatcaact |
120 |
Q |
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| T |
48634792 |
taacatacaacattaattaaagtttcccttggtcacttcacttgcatatgcctg----atcaagtagctcaggaaaggaaaaaaaagagcagcatcaact |
48634887 |
T |
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| Q |
121 |
gaaagaagtgcagattgtggtaaaagcaacactgagggtatccataaaactctcctgtttgtcccctatctatctat |
197 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48634888 |
gaaagaagtgcagattgtggtaaaagcaacactgagggtatccataaaactctcctgtttgtcccctatctatctat |
48634964 |
T |
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