View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16991_high_67 (Length: 202)
Name: NF16991_high_67
Description: NF16991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16991_high_67 |
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Alignment Details
Target: chr8 (Bit Score: 176; Significance: 5e-95; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 12 - 187
Target Start/End: Complemental strand, 25582115 - 25581940
Alignment:
| Q |
12 |
tcatcaccagaaaactctatggtcgccacatcctctttggcctcgccgaaatcttcaacagagtattcaaaatcaccaacctccatttcatcattatcag |
111 |
Q |
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| T |
25582115 |
tcatcaccagaaaactctatggtcgccacatcctctttggcctcgccgaaatcttcaacagagtattcaaaatcaccaacctccatttcatcattatcag |
25582016 |
T |
|
| Q |
112 |
ttatccttaagaaaatgatcctctcacggatgtagtagaattctactcaatctgatccacacccaacacctctttg |
187 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25582015 |
ttatccttaagaaaatgatcctctcacggatgtagtagaattctactcaatctgatccacacccaacacctctttg |
25581940 |
T |
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