View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16994_low_10 (Length: 302)

Name: NF16994_low_10
Description: NF16994
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16994_low_10
NF16994_low_10
[»] chr7 (77 HSPs)
chr7 (126-283)||(41522594-41522751)
chr7 (126-283)||(41525056-41525213)
chr7 (126-283)||(32125168-32125325)
chr7 (126-283)||(26356287-26356443)
chr7 (126-283)||(26358739-26358895)
chr7 (126-283)||(16409737-16409893)
chr7 (126-283)||(11972165-11972330)
chr7 (126-283)||(21189923-21190088)
chr7 (126-283)||(455999-456155)
chr7 (126-283)||(15377041-15377206)
chr7 (126-283)||(16232189-16232354)
chr7 (126-283)||(14949450-14949614)
chr7 (126-283)||(20385451-20385615)
chr7 (126-283)||(24701924-24702072)
chr7 (126-283)||(24704374-24704522)
chr7 (126-249)||(11393637-11393760)
chr7 (128-283)||(27216546-27216694)
chr7 (166-283)||(18639988-18640106)
chr7 (184-270)||(18423425-18423511)
chr7 (2-52)||(455875-455925)
chr7 (2-52)||(11393834-11393884)
chr7 (2-52)||(11972041-11972091)
chr7 (2-52)||(14949688-14949738)
chr7 (2-52)||(15377280-15377330)
chr7 (2-52)||(16232065-16232115)
chr7 (2-52)||(16409613-16409663)
chr7 (2-52)||(20385689-20385739)
chr7 (2-52)||(21190162-21190212)
chr7 (2-52)||(24701800-24701850)
chr7 (2-52)||(24704250-24704300)
chr7 (2-52)||(26356517-26356567)
chr7 (2-52)||(26358969-26359019)
chr7 (2-52)||(27216420-27216470)
chr7 (2-52)||(32125044-32125094)
chr7 (2-52)||(41522482-41522532)
chr7 (2-52)||(41524944-41524994)
chr7 (202-246)||(10064143-10064187)
chr7 (225-283)||(1543494-1543554)
chr7 (248-283)||(20110354-20110389)
chr7 (248-283)||(20110398-20110433)
chr7 (248-283)||(29329205-29329240)
chr7 (202-248)||(42461692-42461739)
chr7 (248-283)||(44116351-44116386)
chr7 (248-283)||(48273190-48273225)
chr7 (249-283)||(32300921-32300955)
chr7 (249-283)||(38227304-38227338)
chr7 (202-247)||(38519115-38519161)
chr7 (204-247)||(16995967-16996011)
chr7 (205-247)||(9033642-9033685)
chr7 (249-284)||(11066346-11066381)
chr7 (248-283)||(11393571-11393606)
chr7 (248-283)||(11972339-11972374)
chr7 (248-283)||(14949406-14949441)
chr7 (248-283)||(15376997-15377032)
chr7 (248-283)||(16409902-16409937)
chr7 (248-283)||(17062161-17062196)
chr7 (248-283)||(18427375-18427410)
chr7 (248-279)||(18456657-18456688)
chr7 (248-283)||(20385407-20385442)
chr7 (248-283)||(21189879-21189914)
chr7 (248-283)||(24702081-24702116)
chr7 (248-283)||(24704531-24704566)
chr7 (248-283)||(27216703-27216738)
chr7 (248-283)||(32125334-32125369)
chr7 (248-283)||(41522760-41522795)
chr7 (248-283)||(41525222-41525257)
chr7 (202-247)||(131148-131193)
chr7 (249-283)||(8852263-8852297)
chr7 (249-283)||(11066388-11066422)
chr7 (202-247)||(11525896-11525941)
chr7 (249-283)||(12371264-12371298)
chr7 (249-283)||(13150676-13150710)
chr7 (249-283)||(14183658-14183692)
chr7 (202-247)||(17017749-17017795)
chr7 (249-283)||(18075583-18075617)
chr7 (249-283)||(20619205-20619239)
chr7 (202-245)||(9390184-9390228)
[»] chr2 (65 HSPs)
chr2 (126-283)||(571074-571231)
chr2 (126-283)||(18808612-18808777)
chr2 (126-283)||(32039826-32039983)
chr2 (126-283)||(23709860-23710025)
chr2 (126-283)||(24905961-24906125)
chr2 (126-283)||(24908436-24908600)
chr2 (128-283)||(26507529-26507691)
chr2 (126-283)||(24901007-24901171)
chr2 (126-283)||(24903484-24903648)
chr2 (131-283)||(23135265-23135424)
chr2 (126-283)||(39681983-39682147)
chr2 (128-283)||(26505051-26505213)
chr2 (126-246)||(34402872-34402992)
chr2 (126-283)||(24898524-24898696)
chr2 (158-280)||(45030185-45030308)
chr2 (202-283)||(28576852-28576933)
chr2 (126-246)||(23130547-23130674)
chr2 (126-246)||(23133014-23133141)
chr2 (126-247)||(24529917-24530022)
chr2 (2-52)||(18808488-18808538)
chr2 (2-52)||(23135137-23135187)
chr2 (2-52)||(23710099-23710149)
chr2 (2-52)||(24898770-24898820)
chr2 (2-52)||(24901245-24901295)
chr2 (2-52)||(24903722-24903772)
chr2 (2-52)||(24906199-24906249)
chr2 (2-52)||(24908674-24908724)
chr2 (2-52)||(26504925-26504975)
chr2 (2-52)||(26507403-26507453)
chr2 (2-52)||(32040057-32040107)
chr2 (2-52)||(34403066-34403116)
chr2 (2-52)||(39681859-39681909)
chr2 (2-52)||(23132890-23132940)
chr2 (4-52)||(23130425-23130473)
chr2 (5-52)||(570953-571000)
chr2 (248-283)||(21155387-21155422)
chr2 (248-283)||(23712340-23712375)
chr2 (248-283)||(24529858-24529893)
chr2 (202-247)||(18547277-18547323)
chr2 (202-247)||(34136683-34136729)
chr2 (202-247)||(43947659-43947705)
chr2 (249-282)||(6576156-6576189)
chr2 (248-283)||(571240-571275)
chr2 (248-283)||(6725795-6725830)
chr2 (248-283)||(18808786-18808821)
chr2 (248-283)||(23135433-23135468)
chr2 (248-283)||(23709816-23709851)
chr2 (248-283)||(23712297-23712332)
chr2 (248-283)||(24898480-24898515)
chr2 (248-283)||(24900963-24900998)
chr2 (248-283)||(24903440-24903475)
chr2 (248-283)||(24905917-24905952)
chr2 (248-283)||(24908392-24908427)
chr2 (248-283)||(26505222-26505257)
chr2 (248-283)||(26507700-26507735)
chr2 (248-283)||(28576942-28576977)
chr2 (248-283)||(32039782-32039817)
chr2 (249-283)||(5032462-5032496)
chr2 (249-283)||(9974845-9974879)
chr2 (249-283)||(19202302-19202336)
chr2 (249-283)||(24435973-24436007)
chr2 (249-283)||(24781961-24781995)
chr2 (248-281)||(24643237-24643270)
chr2 (203-247)||(39828288-39828333)
chr2 (255-283)||(24643278-24643306)
[»] chr1 (36 HSPs)
chr1 (126-283)||(23594063-23594220)
chr1 (126-283)||(21475415-21475572)
chr1 (126-283)||(13988579-13988744)
chr1 (126-283)||(21923619-21923784)
chr1 (126-250)||(41372783-41372907)
chr1 (2-52)||(13988455-13988505)
chr1 (2-52)||(21475646-21475696)
chr1 (2-52)||(21923858-21923908)
chr1 (2-52)||(23594294-23594344)
chr1 (2-52)||(41372659-41372709)
chr1 (248-283)||(21711589-21711624)
chr1 (248-283)||(22123352-22123387)
chr1 (248-283)||(22123395-22123430)
chr1 (248-283)||(27161747-27161782)
chr1 (248-283)||(40389037-40389072)
chr1 (249-283)||(431559-431593)
chr1 (202-247)||(20316158-20316204)
chr1 (202-247)||(21043613-21043659)
chr1 (202-247)||(22118556-22118602)
chr1 (249-283)||(23967569-23967603)
chr1 (202-247)||(48520036-48520082)
chr1 (202-246)||(23967499-23967544)
chr1 (251-283)||(40388996-40389028)
chr1 (249-284)||(20587650-20587685)
chr1 (249-284)||(20592188-20592223)
chr1 (248-283)||(21923575-21923610)
chr1 (248-283)||(23594019-23594054)
chr1 (248-283)||(29297937-29297972)
chr1 (248-283)||(31612111-31612146)
chr1 (248-283)||(31612155-31612190)
chr1 (249-283)||(20316228-20316262)
chr1 (249-283)||(35088395-35088429)
chr1 (202-247)||(47190382-47190427)
chr1 (202-247)||(52954649-52954694)
chr1 (204-247)||(20957935-20957979)
chr1 (202-245)||(35982167-35982211)
[»] chr5 (50 HSPs)
chr5 (126-283)||(10733268-10733424)
chr5 (126-283)||(29348131-29348287)
chr5 (126-283)||(29350604-29350760)
chr5 (126-283)||(42245693-42245849)
chr5 (129-283)||(265096-265258)
chr5 (126-283)||(20908681-20908846)
chr5 (126-283)||(29345650-29345814)
chr5 (126-246)||(39363084-39363196)
chr5 (126-249)||(31143957-31144074)
chr5 (202-280)||(39244889-39244967)
chr5 (126-247)||(2155000-2155105)
chr5 (2-52)||(265328-265378)
chr5 (2-52)||(10733498-10733548)
chr5 (2-52)||(20908557-20908607)
chr5 (2-52)||(29345526-29345576)
chr5 (2-52)||(29348007-29348057)
chr5 (2-52)||(29350480-29350530)
chr5 (2-52)||(31143833-31143883)
chr5 (2-52)||(42245923-42245973)
chr5 (2-52)||(39362960-39363010)
chr5 (248-283)||(11581528-11581563)
chr5 (248-283)||(14047921-14047956)
chr5 (248-283)||(14047965-14048000)
chr5 (248-283)||(20918274-20918309)
chr5 (248-283)||(22411986-22412021)
chr5 (248-283)||(36155027-36155062)
chr5 (202-247)||(26733120-26733166)
chr5 (251-283)||(24066993-24067025)
chr5 (248-283)||(265052-265087)
chr5 (248-283)||(2154898-2154933)
chr5 (248-283)||(2154941-2154976)
chr5 (248-283)||(11581484-11581519)
chr5 (248-283)||(20908855-20908890)
chr5 (252-283)||(22412033-22412064)
chr5 (208-247)||(23202861-23202900)
chr5 (205-247)||(23469549-23469592)
chr5 (248-283)||(29329734-29329769)
chr5 (248-283)||(29345823-29345858)
chr5 (248-283)||(29348296-29348331)
chr5 (248-283)||(29350769-29350804)
chr5 (248-283)||(42245649-42245684)
chr5 (202-247)||(15796166-15796212)
chr5 (249-283)||(21309064-21309098)
chr5 (202-247)||(21732259-21732304)
chr5 (202-247)||(21809910-21809955)
chr5 (202-247)||(26740976-26741022)
chr5 (208-248)||(16227522-16227563)
chr5 (251-283)||(18319278-18319310)
chr5 (202-247)||(25743507-25743554)
chr5 (248-280)||(29329777-29329809)
[»] chr3 (75 HSPs)
chr3 (126-283)||(16454609-16454765)
chr3 (126-283)||(9707934-9708099)
chr3 (126-283)||(34158995-34159160)
chr3 (126-283)||(55500620-55500776)
chr3 (126-283)||(17462847-17463012)
chr3 (126-283)||(45607235-45607384)
chr3 (129-283)||(13152119-13152265)
chr3 (129-283)||(13154584-13154730)
chr3 (126-283)||(7781637-7781801)
chr3 (126-283)||(10248051-10248199)
chr3 (126-246)||(55476191-55476303)
chr3 (173-283)||(15977236-15977346)
chr3 (178-283)||(6469458-6469563)
chr3 (202-283)||(45578166-45578247)
chr3 (178-283)||(28848939-28849043)
chr3 (158-248)||(29172969-29173059)
chr3 (166-247)||(21618184-21618266)
chr3 (2-52)||(7781875-7781925)
chr3 (2-52)||(13152342-13152392)
chr3 (2-52)||(16454839-16454889)
chr3 (2-52)||(17462723-17462773)
chr3 (2-52)||(34158871-34158921)
chr3 (166-247)||(36166290-36166372)
chr3 (2-52)||(45607458-45607508)
chr3 (2-52)||(55476067-55476117)
chr3 (2-52)||(55500496-55500546)
chr3 (2-50)||(13154809-13154857)
chr3 (1-52)||(15555360-15555411)
chr3 (2-52)||(9708173-9708223)
chr3 (2-52)||(10248273-10248324)
chr3 (248-283)||(8898894-8898929)
chr3 (248-283)||(21618290-21618325)
chr3 (248-283)||(24153449-24153484)
chr3 (248-283)||(36166396-36166431)
chr3 (248-283)||(41123690-41123725)
chr3 (202-247)||(9577449-9577495)
chr3 (249-283)||(43890082-43890116)
chr3 (191-247)||(15206668-15206725)
chr3 (248-283)||(6469414-6469449)
chr3 (248-283)||(7781593-7781628)
chr3 (248-283)||(10248007-10248042)
chr3 (249-284)||(13031822-13031857)
chr3 (248-283)||(13152075-13152110)
chr3 (248-283)||(13154540-13154575)
chr3 (248-283)||(15977355-15977390)
chr3 (248-283)||(16283095-16283130)
chr3 (248-283)||(16283138-16283173)
chr3 (248-283)||(16454565-16454600)
chr3 (248-283)||(17446981-17447016)
chr3 (248-283)||(17463021-17463056)
chr3 (248-283)||(28848895-28848930)
chr3 (248-283)||(29172868-29172903)
chr3 (248-283)||(29172911-29172946)
chr3 (127-162)||(29173072-29173107)
chr3 (248-283)||(34159169-34159204)
chr3 (248-283)||(36166440-36166475)
chr3 (248-283)||(45578122-45578157)
chr3 (248-283)||(45607191-45607226)
chr3 (225-283)||(45796756-45796821)
chr3 (248-283)||(55500785-55500820)
chr3 (249-283)||(9707891-9707925)
chr3 (202-247)||(12377703-12377749)
chr3 (202-247)||(13919110-13919156)
chr3 (249-283)||(14497133-14497167)
chr3 (249-283)||(14507824-14507858)
chr3 (202-247)||(15245761-15245807)
chr3 (202-247)||(15264882-15264928)
chr3 (249-283)||(15932552-15932586)
chr3 (249-283)||(17538050-17538084)
chr3 (249-283)||(17548613-17548647)
chr3 (249-279)||(18700776-18700806)
chr3 (249-283)||(22307658-22307692)
chr3 (202-247)||(32404482-32404527)
chr3 (249-283)||(40806916-40806950)
chr3 (249-283)||(41173417-41173451)
[»] scaffold0230 (3 HSPs)
scaffold0230 (126-283)||(13624-13781)
scaffold0230 (2-52)||(13500-13550)
scaffold0230 (248-283)||(13790-13825)
[»] chr6 (53 HSPs)
chr6 (126-283)||(1541239-1541395)
chr6 (126-283)||(12741995-12742151)
chr6 (126-283)||(2291508-2291673)
chr6 (126-283)||(8054698-8054863)
chr6 (126-283)||(18334920-18335085)
chr6 (126-283)||(19004715-19004880)
chr6 (126-283)||(24422216-24422381)
chr6 (126-283)||(33863947-33864112)
chr6 (126-283)||(22781941-22782105)
chr6 (126-283)||(33861464-33861628)
chr6 (126-283)||(26924968-26925132)
chr6 (126-247)||(25591120-25591249)
chr6 (126-247)||(25688245-25688358)
chr6 (153-283)||(19859247-19859378)
chr6 (126-182)||(25656472-25656528)
chr6 (184-247)||(25714170-25714233)
chr6 (2-52)||(2291747-2291797)
chr6 (2-52)||(8054574-8054624)
chr6 (2-52)||(12741871-12741921)
chr6 (2-52)||(18335159-18335209)
chr6 (2-52)||(19004591-19004641)
chr6 (2-52)||(22781817-22781867)
chr6 (2-52)||(24422092-24422142)
chr6 (2-52)||(26925206-26925256)
chr6 (2-52)||(33861340-33861390)
chr6 (2-52)||(33863823-33863873)
chr6 (202-247)||(25656524-25656569)
chr6 (126-182)||(25714136-25714192)
chr6 (2-52)||(1541469-1541520)
chr6 (248-284)||(20557219-20557255)
chr6 (248-283)||(20557177-20557212)
chr6 (248-283)||(25688382-25688417)
chr6 (248-283)||(25714300-25714335)
chr6 (202-247)||(17229985-17230031)
chr6 (202-247)||(17742939-17742985)
chr6 (202-245)||(20136415-20136459)
chr6 (202-245)||(22196410-22196454)
chr6 (248-283)||(1595349-1595384)
chr6 (248-283)||(1595392-1595427)
chr6 (248-283)||(12742160-12742195)
chr6 (248-283)||(16448771-16448806)
chr6 (248-283)||(18334876-18334911)
chr6 (248-283)||(19004889-19004924)
chr6 (248-283)||(19859203-19859238)
chr6 (248-283)||(24422390-24422425)
chr6 (248-283)||(26924924-26924959)
chr6 (248-283)||(33861637-33861672)
chr6 (248-283)||(33864121-33864156)
chr6 (202-247)||(16492893-16492938)
chr6 (202-247)||(18896640-18896685)
chr6 (202-247)||(35007894-35007939)
chr6 (251-283)||(16448815-16448847)
chr6 (202-247)||(18178001-18178048)
[»] chr4 (48 HSPs)
chr4 (126-283)||(1837837-1837996)
chr4 (126-283)||(18239747-18239912)
chr4 (126-283)||(50222667-50222832)
chr4 (126-283)||(14718294-14718459)
chr4 (126-283)||(15118680-15118845)
chr4 (126-250)||(12033500-12033624)
chr4 (126-283)||(44614957-44615122)
chr4 (126-283)||(3514715-3514865)
chr4 (166-283)||(44773415-44773533)
chr4 (184-283)||(7641510-7641609)
chr4 (126-219)||(29267332-29267433)
chr4 (158-248)||(15355668-15355759)
chr4 (2-52)||(12033698-12033748)
chr4 (2-52)||(14739616-14739666)
chr4 (2-52)||(15118919-15118969)
chr4 (2-52)||(29267208-29267258)
chr4 (2-52)||(44614833-44614883)
chr4 (2-52)||(50222906-50222956)
chr4 (4-52)||(1838070-1838118)
chr4 (2-52)||(18239986-18240036)
chr4 (248-283)||(14280196-14280231)
chr4 (248-283)||(15355610-15355645)
chr4 (248-283)||(20149712-20149747)
chr4 (202-247)||(15791428-15791474)
chr4 (202-247)||(26045625-26045671)
chr4 (202-247)||(26050806-26050852)
chr4 (251-283)||(14280155-14280187)
chr4 (12-52)||(38106974-38107014)
chr4 (248-283)||(1837793-1837828)
chr4 (248-283)||(7641466-7641501)
chr4 (248-283)||(8575151-8575186)
chr4 (248-283)||(15118636-15118671)
chr4 (248-283)||(18215559-18215594)
chr4 (248-283)||(18239703-18239738)
chr4 (248-283)||(29267463-29267498)
chr4 (225-283)||(32850970-32851035)
chr4 (248-283)||(44102094-44102129)
chr4 (248-283)||(44615131-44615166)
chr4 (248-283)||(50222623-50222658)
chr4 (248-283)||(52312310-52312345)
chr4 (248-283)||(52312353-52312388)
chr4 (248-283)||(54798995-54799030)
chr4 (248-283)||(54799039-54799074)
chr4 (248-282)||(12554-12588)
chr4 (225-283)||(15869178-15869238)
chr4 (202-245)||(15098938-15098982)
chr4 (202-245)||(19736381-19736425)
chr4 (251-279)||(20149671-20149699)
[»] scaffold0254 (3 HSPs)
scaffold0254 (126-283)||(20416-20581)
scaffold0254 (2-52)||(20292-20342)
scaffold0254 (248-283)||(20590-20625)
[»] scaffold0023 (4 HSPs)
scaffold0023 (126-283)||(94080-94245)
scaffold0023 (2-52)||(93956-94006)
scaffold0023 (248-284)||(44297-44333)
scaffold0023 (248-283)||(94254-94289)
[»] chr8 (45 HSPs)
chr8 (126-283)||(1484071-1484236)
chr8 (126-283)||(20402896-20403061)
chr8 (129-283)||(22001426-22001588)
chr8 (126-283)||(4542701-4542865)
chr8 (126-283)||(5853620-5853784)
chr8 (126-283)||(14823444-14823608)
chr8 (126-246)||(4482981-4483093)
chr8 (166-283)||(20046479-20046597)
chr8 (126-246)||(18678390-18678517)
chr8 (126-246)||(18717579-18717706)
chr8 (158-246)||(26225636-26225725)
chr8 (158-246)||(26219445-26219534)
chr8 (2-52)||(1483947-1483997)
chr8 (2-52)||(4482857-4482907)
chr8 (2-52)||(4542939-4542989)
chr8 (2-52)||(5853858-5853908)
chr8 (2-52)||(14823320-14823370)
chr8 (2-52)||(18678591-18678641)
chr8 (2-52)||(18717780-18717830)
chr8 (2-52)||(20402772-20402822)
chr8 (2-52)||(22001306-22001356)
chr8 (248-283)||(15203558-15203593)
chr8 (248-283)||(26225576-26225611)
chr8 (202-244)||(37515270-37515313)
chr8 (248-283)||(45291023-45291058)
chr8 (202-247)||(18833179-18833225)
chr8 (249-283)||(18833248-18833282)
chr8 (202-247)||(20502432-20502478)
chr8 (202-247)||(22253495-22253541)
chr8 (202-247)||(22963743-22963789)
chr8 (202-247)||(28397293-28397339)
chr8 (248-280)||(19896065-19896097)
chr8 (248-283)||(1484245-1484280)
chr8 (248-283)||(4542657-4542692)
chr8 (248-283)||(5853576-5853611)
chr8 (248-283)||(19896108-19896143)
chr8 (248-283)||(20403070-20403105)
chr8 (248-283)||(22001597-22001632)
chr8 (248-283)||(41598031-41598066)
chr8 (202-247)||(22382064-22382110)
chr8 (202-247)||(22525302-22525348)
chr8 (202-247)||(22984028-22984074)
chr8 (202-247)||(22995586-22995632)
chr8 (249-283)||(39937108-39937142)
chr8 (203-247)||(23667670-23667714)
[»] scaffold0444 (2 HSPs)
scaffold0444 (126-283)||(13061-13226)
scaffold0444 (2-52)||(12937-12987)
[»] scaffold0145 (3 HSPs)
scaffold0145 (126-283)||(9418-9583)
scaffold0145 (2-52)||(9294-9344)
scaffold0145 (248-283)||(9591-9626)
[»] scaffold0044 (3 HSPs)
scaffold0044 (126-283)||(40070-40234)
scaffold0044 (2-52)||(39946-39996)
scaffold0044 (248-283)||(40243-40278)
[»] scaffold0028 (10 HSPs)
scaffold0028 (126-283)||(136350-136514)
scaffold0028 (126-283)||(138819-138983)
scaffold0028 (126-283)||(143757-143921)
scaffold0028 (126-283)||(133881-134045)
scaffold0028 (126-283)||(141288-141452)
scaffold0028 (2-52)||(133757-133807)
scaffold0028 (2-52)||(136226-136276)
scaffold0028 (2-52)||(138695-138745)
scaffold0028 (2-52)||(141164-141214)
scaffold0028 (2-52)||(143633-143683)
[»] scaffold0134 (3 HSPs)
scaffold0134 (126-283)||(37491-37655)
scaffold0134 (2-52)||(37367-37417)
scaffold0134 (248-283)||(37664-37699)
[»] scaffold0003 (2 HSPs)
scaffold0003 (126-247)||(158795-158924)
scaffold0003 (248-283)||(158735-158770)
[»] scaffold0716 (1 HSPs)
scaffold0716 (126-283)||(4393-4552)
[»] scaffold0022 (3 HSPs)
scaffold0022 (166-247)||(116154-116236)
scaffold0022 (248-283)||(116265-116300)
scaffold0022 (248-282)||(116309-116343)
[»] scaffold0075 (2 HSPs)
scaffold0075 (225-280)||(8767-8824)
scaffold0075 (248-283)||(52251-52286)
[»] scaffold0192 (1 HSPs)
scaffold0192 (225-283)||(9677-9737)
[»] scaffold0142 (3 HSPs)
scaffold0142 (248-283)||(16664-16699)
scaffold0142 (248-281)||(16577-16610)
scaffold0142 (248-283)||(16620-16655)
[»] scaffold0106 (1 HSPs)
scaffold0106 (248-283)||(15479-15514)
[»] scaffold0013 (2 HSPs)
scaffold0013 (248-283)||(30137-30172)
scaffold0013 (248-283)||(30181-30216)
[»] scaffold0853 (1 HSPs)
scaffold0853 (202-247)||(2995-3041)
[»] scaffold0485 (1 HSPs)
scaffold0485 (202-247)||(9915-9961)
[»] scaffold0396 (1 HSPs)
scaffold0396 (202-247)||(1637-1683)
[»] scaffold0347 (1 HSPs)
scaffold0347 (202-247)||(8633-8679)
[»] scaffold0293 (1 HSPs)
scaffold0293 (202-247)||(17247-17293)
[»] scaffold0122 (1 HSPs)
scaffold0122 (248-282)||(44993-45027)
[»] scaffold0040 (2 HSPs)
scaffold0040 (202-247)||(10882-10928)
scaffold0040 (202-247)||(103962-104006)
[»] scaffold0011 (1 HSPs)
scaffold0011 (202-247)||(38446-38492)
[»] scaffold0010 (2 HSPs)
scaffold0010 (202-247)||(6758-6804)
scaffold0010 (206-247)||(394-436)
[»] scaffold0001 (2 HSPs)
scaffold0001 (202-247)||(497206-497252)
scaffold0001 (249-282)||(76629-76662)
[»] scaffold0101 (1 HSPs)
scaffold0101 (251-283)||(1525-1557)
[»] scaffold0737 (2 HSPs)
scaffold0737 (249-284)||(6785-6820)
scaffold0737 (249-283)||(6744-6778)
[»] scaffold0697 (2 HSPs)
scaffold0697 (252-283)||(6406-6437)
scaffold0697 (248-281)||(6445-6478)
[»] scaffold0282 (1 HSPs)
scaffold0282 (202-248)||(12002-12049)
[»] scaffold0235 (2 HSPs)
scaffold0235 (225-283)||(13151-13216)
scaffold0235 (225-283)||(24853-24918)
[»] scaffold0914 (1 HSPs)
scaffold0914 (202-247)||(1444-1490)
[»] scaffold0453 (1 HSPs)
scaffold0453 (202-247)||(2149-2195)
[»] scaffold0375 (1 HSPs)
scaffold0375 (249-283)||(9400-9434)
[»] scaffold0371 (1 HSPs)
scaffold0371 (249-283)||(2803-2837)
[»] scaffold0278 (1 HSPs)
scaffold0278 (202-247)||(10805-10850)
[»] scaffold0111 (2 HSPs)
scaffold0111 (249-283)||(7234-7268)
scaffold0111 (249-283)||(14353-14387)
[»] scaffold0064 (1 HSPs)
scaffold0064 (249-283)||(57720-57754)
[»] scaffold0061 (1 HSPs)
scaffold0061 (249-283)||(19517-19551)
[»] scaffold0058 (2 HSPs)
scaffold0058 (249-283)||(711-745)
scaffold0058 (202-247)||(769-816)
[»] scaffold0047 (1 HSPs)
scaffold0047 (249-283)||(78006-78040)
[»] scaffold0036 (1 HSPs)
scaffold0036 (249-283)||(78450-78484)
[»] scaffold0006 (1 HSPs)
scaffold0006 (202-247)||(106064-106110)
[»] scaffold0601 (1 HSPs)
scaffold0601 (249-278)||(7945-7974)
[»] scaffold0413 (1 HSPs)
scaffold0413 (202-247)||(12314-12358)
[»] scaffold0021 (1 HSPs)
scaffold0021 (202-247)||(136715-136759)


Alignment Details
Target: chr7 (Bit Score: 158; Significance: 4e-84; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 41522594 - 41522751
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41522594 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 41522693  T
Q  226 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41522694 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 41522751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 41525056 - 41525213
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41525056 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 41525155  T
Q  226 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41525156 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 41525213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 32125168 - 32125325
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32125168 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaacttgacaacttaacctcttgactatgcaacttaatcttct 32125267  T
Q  226 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32125268 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 32125325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 26356443 - 26356287
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26356443 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 26356344  T
Q  226 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26356343 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 26356287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 26358895 - 26358739
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26358895 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 26358796  T
Q  226 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26358795 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 26358739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 16409737 - 16409893
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16409737 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactcgataacttgacaacttaacctcttgactatgcaacttaatcttct 16409836  T
Q  226 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16409837 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 16409893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 11972165 - 11972330
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  11972165 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 11972264  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11972265 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 11972330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 21190088 - 21189923
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  21190088 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 21189989  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21189988 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 21189923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 455999 - 456155
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  455999 agaatcacagctttaaacaatttcatgatttaacaacttaacaacttgataacttgacaacttgacaacttaacctcttgactatgcaacttaatcttct 456098  T
Q  226 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  456099 aatcatgcatgtggtaccaatctttgagcgtaaataggct-tcagggcatcaagccct 456155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 15377206 - 15377041
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  15377206 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 15377107  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15377106 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccaagggcatcaagccct 15377041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 16232189 - 16232354
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  16232189 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 16232288  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16232289 aatcttctaatcatgcatgtggtaccaatctttaagcgtaaataggctcccagggcatcaagccct 16232354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 14949614 - 14949450
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 217  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  14949614 agaatcatagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 14949515  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14949514 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 14949450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 20385615 - 20385451
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  20385615 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 20385516  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  20385515 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccaaggcatcaagccct 20385451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 24701924 - 24702072
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  24701924 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaact--------tgacaacttaacctcttgactatgcaacttaatcttct 24702015  T
Q  226 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24702016 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 24702072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 24704374 - 24704522
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  24704374 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaact--------tgacaacttaacctcttgactatgcaacttaatcttct 24704465  T
Q  226 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24704466 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 24704522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 126 - 249
Target Start/End: Complemental strand, 11393760 - 11393637
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11393760 agaatcatagctttaaacaatttcatgatttaacaacttaacaacttgacaacttgacaacttgacaacttaacctcttgactatgcaacttaatcttct 11393661  T
Q  226 aatcatgcatgtggtaccaatctt 249  Q
    ||||||||||||||||||||||||    
T  11393660 aatcatgcatgtggtaccaatctt 11393637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 128 - 283
Target Start/End: Original strand, 27216546 - 27216694
Alignment:
Q  128 aatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctct--tgactatgcaacttaatcttct 225  Q
    |||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  27216546 aatcacagctttaaacaatttcatgatttaacaactt--------gacaacttgataacttgacaacttaacctctcttgactatgcaacttaatcttct 27216637  T
Q  226 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27216638 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 27216694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 166 - 283
Target Start/End: Original strand, 18639988 - 18640106
Alignment:
Q  166 acaactcgacaa-cttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggc 264  Q
    |||||| ||||| ||||| |||| |||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18639988 acaacttgacaatcttgacaactcgacaacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggc 18640087  T
Q  265 tcccagggcatcaagccct 283  Q
    |||||||||||||| ||||    
T  18640088 tcccagggcatcaaaccct 18640106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 184 - 270
Target Start/End: Original strand, 18423425 - 18423511
Alignment:
Q  184 aacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccag 270  Q
    |||| |||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18423425 aactcgacaacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccag 18423511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 455875 - 455925
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  455875 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 455925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 11393884 - 11393834
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11393884 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 11393834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 11972041 - 11972091
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11972041 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 11972091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 14949738 - 14949688
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14949738 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 14949688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 15377330 - 15377280
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15377330 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 15377280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 16232065 - 16232115
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16232065 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 16232115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 16409613 - 16409663
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16409613 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 16409663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 20385739 - 20385689
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20385739 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 20385689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 21190212 - 21190162
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21190212 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 21190162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 24701800 - 24701850
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24701800 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 24701850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 24704250 - 24704300
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24704250 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 24704300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 26356567 - 26356517
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26356567 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 26356517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 26359019 - 26358969
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26359019 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 26358969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 27216420 - 27216470
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27216420 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 27216470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 32125044 - 32125094
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  32125044 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 32125094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 41522482 - 41522532
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  41522482 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 41522532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 41524944 - 41524994
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  41524944 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 41524994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 246
Target Start/End: Complemental strand, 10064187 - 10064143
Alignment:
Q  202 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaat 246  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  10064187 cttgactatgcaacttaatcctctaatcatgcatgtggtaccaat 10064143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 1543554 - 1543494
Alignment:
Q  225 taatcatgcatgtggtaccaatctt--tgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||| |  |||||||||||||||||| || ||||||||||||    
T  1543554 taatcatgcatgtggtaccaatcatattgagcgtaaataggctcctagagcatcaagccct 1543494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 20110354 - 20110389
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  20110354 tttgagcgtaaataggctcccagggcatcaagccct 20110389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 20110398 - 20110433
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  20110398 tttgagcgtaaataggctcccagggcatcaagccct 20110433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 29329240 - 29329205
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  29329240 tttgagcgtaaataggctcccagggcatcaagccct 29329205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 248
Target Start/End: Original strand, 42461692 - 42461739
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatct 248  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||    
T  42461692 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatct 42461739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 44116351 - 44116386
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  44116351 tttgagcgtaaataggctcccagggcatcaagccct 44116386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 48273190 - 48273225
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  48273190 tttgagcgtaaataggctcccagggcatcaagccct 48273225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 32300921 - 32300955
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||    
T  32300921 ttgagcgtaaataggctcccagggcatcaagccct 32300955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 38227304 - 38227338
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||    
T  38227304 ttgagcgtaaataggctcccagggcatcaagccct 38227338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 38519115 - 38519161
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  38519115 cttgactatgcaacttattcttcttaatcatgcatgtggtaccaatc 38519161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 16995967 - 16996011
Alignment:
Q  204 tgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||    
T  16995967 tgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 16996011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 247
Target Start/End: Complemental strand, 9033685 - 9033642
Alignment:
Q  205 gactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||    
T  9033685 gactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 9033642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 284
Target Start/End: Original strand, 11066346 - 11066381
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccctt 284  Q
    |||||||||||||||||| |||||||||||||||||    
T  11066346 ttgagcgtaaataggctcacagggcatcaagccctt 11066381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 11393606 - 11393571
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  11393606 tttgagcgtaaaaaggctcccagggcatcaagccct 11393571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 11972339 - 11972374
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  11972339 tttgagcgtaaaaaggctcccagggcatcaagccct 11972374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 14949441 - 14949406
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  14949441 tttgagcgtaaaaaggctcccagggcatcaagccct 14949406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 15377032 - 15376997
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  15377032 tttgagcgtaaaaaggctcccagggcatcaagccct 15376997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 16409902 - 16409937
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  16409902 tttgagcgtaaaaaggctcccagggcatcaagccct 16409937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 17062196 - 17062161
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||| ||||||||||||||||||||||||||||||    
T  17062196 tttgatcgtaaataggctcccagggcatcaagccct 17062161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 18427375 - 18427410
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  18427375 tttgagcgtaaaaaggctcccagggcatcaagccct 18427410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 279
Target Start/End: Complemental strand, 18456688 - 18456657
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaag 279  Q
    ||||||||||||||||||||||||||||||||    
T  18456688 tttgagcgtaaataggctcccagggcatcaag 18456657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 20385442 - 20385407
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  20385442 tttgagcgtaaaaaggctcccagggcatcaagccct 20385407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 21189914 - 21189879
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  21189914 tttgagcgtaaaaaggctcccagggcatcaagccct 21189879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 24702081 - 24702116
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  24702081 tttgagcgtaaaaaggctcccagggcatcaagccct 24702116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 24704531 - 24704566
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  24704531 tttgagcgtaaaaaggctcccagggcatcaagccct 24704566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 27216703 - 27216738
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  27216703 tttgagcgtaaaaaggctcccagggcatcaagccct 27216738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 32125334 - 32125369
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  32125334 tttgagcgtaaaaaggctcccagggcatcaagccct 32125369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 41522760 - 41522795
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  41522760 tttgagcgtaaaaaggctcccagggcatcaagccct 41522795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 41525222 - 41525257
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  41525222 tttgagcgtaaaaaggctcccagggcatcaagccct 41525257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 131193 - 131148
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  131193 cttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 131148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 8852297 - 8852263
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  8852297 ttgagcgtaaataggctcacagggcatcaagccct 8852263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 11066388 - 11066422
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  11066388 ttgagcgtaaataggctcacagggcatcaagccct 11066422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 11525941 - 11525896
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  11525941 cttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 11525896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 12371264 - 12371298
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  12371264 ttgagcgtaaataggctcacagggcatcaagccct 12371298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 13150710 - 13150676
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  13150710 ttgagcgtaaataggctcacagggcatcaagccct 13150676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 14183692 - 14183658
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  14183692 ttgagcgtaaataggctcacagggcatcaagccct 14183658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 17017795 - 17017749
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  17017795 cttgactatgcaacttaaacctcttaatcatgcatgtggtaccaatc 17017749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 18075617 - 18075583
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  18075617 ttgagcgtaaataggctcacagggcatcaagccct 18075583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 20619205 - 20619239
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  20619205 ttgagcgtaaataggctcacagggcatcaagccct 20619239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 245
Target Start/End: Complemental strand, 9390228 - 9390184
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaa 245  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||    
T  9390228 cttgactatgcaacttcaacttcttaatcatgcatgtggtaccaa 9390184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 154; Significance: 1e-81; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 571074 - 571231
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  571074 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 571173  T
Q  226 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  571174 aatcatgcatgtggtaccaatctttgagcgtaaataggctcctagggcatcaagccct 571231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 18808612 - 18808777
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  18808612 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 18808711  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18808712 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 18808777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 32039983 - 32039826
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| || ||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  32039983 agaatcacagctttaaacaatttcatgatttaacaactcgacaacttgataacttgacaacctgacaacttaacctcttgactatgcaacttaatcttct 32039884  T
Q  226 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32039883 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 32039826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 23710025 - 23709860
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  23710025 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 23709926  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23709925 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccaagggcatcaagccct 23709860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 24906125 - 24905961
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  24906125 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 24906026  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24906025 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 24905961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 24908600 - 24908436
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  24908600 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 24908501  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24908500 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 24908436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 128 - 283
Target Start/End: Original strand, 26507529 - 26507691
Alignment:
Q  128 aatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaacttaa 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  26507529 aatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaacttaa 26507628  T
Q  220 tcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26507629 tcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 26507691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 24901171 - 24901007
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  24901171 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 24901072  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  24901071 aatcttctaatcatgcatgtggtaccaatatttgagcgtaaataggct-ccagggcatcaagccct 24901007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 24903648 - 24903484
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  24903648 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 24903549  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  24903548 aatcttctaatcatgcatgtggtaccaatatttgagcgtaaataggct-ccagggcatcaagccct 24903484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 131 - 283
Target Start/End: Original strand, 23135265 - 23135424
Alignment:
Q  131 cacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaacttaatct 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  23135265 cacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaacttaatct 23135364  T
Q  223 tctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23135365 tctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 23135424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 39681983 - 39682147
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||        ||||||||||||||||||||||||||||||    
T  39681983 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacctgataacttgacaacttgacaacttaacctcttgactatgcaactt 39682082  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  39682083 aatcttctaatcatgcatgtggtatcaatctttgagcgtaaataggct-ccagggcatcaagccct 39682147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 128 - 283
Target Start/End: Original strand, 26505051 - 26505213
Alignment:
Q  128 aatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaacttaa 219  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  26505051 aatcgcagttttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaacttaa 26505150  T
Q  220 tcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26505151 tcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 26505213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 126 - 246
Target Start/End: Complemental strand, 34402992 - 34402872
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34402992 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaacttgacaacttaacctcttgactatgcaacttaatcttct 34402893  T
Q  226 aatcatgcatgtggtaccaat 246  Q
    |||||||||||||||||||||    
T  34402892 aatcatgcatgtggtaccaat 34402872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 24898696 - 24898524
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt----------------aacctcttgacta 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                |||||||||||||    
T  24898696 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttgacaacttaacctcttgacta 24898597  T
Q  210 tgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24898596 tgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 24898524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 158 - 280
Target Start/End: Complemental strand, 45030308 - 45030185
Alignment:
Q  158 acaacttaacaactcgacaacttgataa-cttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgt 256  Q
    |||||||| |||||||||||||||| || ||||||||||  ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45030308 acaacttatcaactcgacaacttgacaatcttgacaactcgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgt 45030209  T
Q  257 aaataggctcccagggcatcaagc 280  Q
    ||||||||||||||||||||||||    
T  45030208 aaataggctcccagggcatcaagc 45030185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 28576852 - 28576933
Alignment:
Q  202 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28576852 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgttaataggctcccagggcatcaagccct 28576933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 126 - 246
Target Start/End: Original strand, 23130547 - 23130674
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgat--------aacttgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  23130547 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 23130646  T
Q  218 aatcttctaatcatgcatgtggtaccaat 246  Q
    |  | ||| || |||||||||||||||||    
T  23130647 agacctcttat-atgcatgtggtaccaat 23130674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 126 - 246
Target Start/End: Original strand, 23133014 - 23133141
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgat--------aacttgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  23133014 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 23133113  T
Q  218 aatcttctaatcatgcatgtggtaccaat 246  Q
    |  | ||| || |||||||||||||||||    
T  23133114 agacctcttat-atgcatgtggtaccaat 23133141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 126 - 247
Target Start/End: Complemental strand, 24530022 - 24529917
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||                ||||||||||||||||||||||||    
T  24530022 agaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaa----------------cttgactatgcaacttaatcttct 24529939  T
Q  226 aatcatgcatgtggtaccaatc 247  Q
    ||||||||||||||||||||||    
T  24529938 aatcatgcatgtggtaccaatc 24529917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 18808488 - 18808538
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18808488 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 18808538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 23135137 - 23135187
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23135137 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 23135187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 23710149 - 23710099
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23710149 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 23710099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 24898820 - 24898770
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24898820 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 24898770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 24901295 - 24901245
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24901295 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 24901245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 24903772 - 24903722
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24903772 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 24903722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 24906249 - 24906199
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24906249 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 24906199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 24908724 - 24908674
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24908724 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 24908674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 26504925 - 26504975
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26504925 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 26504975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 26507403 - 26507453
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26507403 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 26507453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 32040107 - 32040057
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  32040107 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 32040057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 34403116 - 34403066
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34403116 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 34403066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 39681859 - 39681909
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39681859 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 39681909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 23132890 - 23132940
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  23132890 tacatttaacaacataaacatcatcaatcatatttaacaactcatagacaa 23132940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 23130425 - 23130473
Alignment:
Q  4 catttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  23130425 catttaacaacataaacatcatcaatcatatttaacaactcatagacaa 23130473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 570953 - 571000
Alignment:
Q  5 atttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  570953 atttaacaacatatgcatcatcaatcatatttaacaactcatagacaa 571000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 21155422 - 21155387
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  21155422 tttgagcgtaaataggctcccagggcatcaagccct 21155387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 23712375 - 23712340
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  23712375 tttgagcgtaaataggctcccagggcatcaagccct 23712340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 24529893 - 24529858
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  24529893 tttgagcgtaaataggctcccagggcatcaagccct 24529858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 18547323 - 18547277
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  18547323 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 18547277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 34136683 - 34136729
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  34136683 cttgactatgcaacttattcttcttaatcatgcatgtggtaccaatc 34136729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 43947705 - 43947659
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  43947705 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 43947659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 249 - 282
Target Start/End: Original strand, 6576156 - 6576189
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccc 282  Q
    ||||||||||||||||||||||||||||||||||    
T  6576156 ttgagcgtaaataggctcccagggcatcaagccc 6576189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 571240 - 571275
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  571240 tttgagcgtaaaaaggctcccagggcatcaagccct 571275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 6725795 - 6725830
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||| |||||||||||    
T  6725795 tttgagcgtaaataggctcccaggacatcaagccct 6725830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 18808786 - 18808821
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  18808786 tttgagcgtaaaaaggctcccagggcatcaagccct 18808821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 23135433 - 23135468
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  23135433 tttgagcgtaaaaaggctcccagggcatcaagccct 23135468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 23709851 - 23709816
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  23709851 tttgagcgtaaaaaggctcccagggcatcaagccct 23709816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 23712332 - 23712297
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  23712332 tttgagcgtaaaaaggctcccagggcatcaagccct 23712297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 24898515 - 24898480
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  24898515 tttgagcgtaaaaaggctcccagggcatcaagccct 24898480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 24900998 - 24900963
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  24900998 tttgagcgtaaaaaggctcccagggcatcaagccct 24900963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 24903475 - 24903440
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  24903475 tttgagcgtaaaaaggctcccagggcatcaagccct 24903440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 24905952 - 24905917
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  24905952 tttgagcgtaaaaaggctcccagggcatcaagccct 24905917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 24908427 - 24908392
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  24908427 tttgagcgtaaaaaggctcccagggcatcaagccct 24908392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 26505222 - 26505257
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  26505222 tttgagcgtaaaaaggctcccagggcatcaagccct 26505257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 26507700 - 26507735
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  26507700 tttgagcgtaaaaaggctcccagggcatcaagccct 26507735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 28576942 - 28576977
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  28576942 tttgagcgtaaaaaggctcccagggcatcaagccct 28576977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 32039817 - 32039782
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  32039817 tttgagcgtaaaaaggctcccagggcatcaagccct 32039782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 5032496 - 5032462
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  5032496 ttgagcgtaaataggctcacagggcatcaagccct 5032462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 9974845 - 9974879
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  9974845 ttgagcgtaaataggctcacagggcatcaagccct 9974879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 19202336 - 19202302
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  19202336 ttgagcgtaaataggctcacagggcatcaagccct 19202302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 24435973 - 24436007
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  24435973 ttgagcgtaaataggctcacagggcatcaagccct 24436007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 24781995 - 24781961
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  24781995 ttgagcgtaaataggctcacagggcatcaagccct 24781961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 281
Target Start/End: Complemental strand, 24643270 - 24643237
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagcc 281  Q
    |||||||||||| |||||||||||||||||||||    
T  24643270 tttgagcgtaaaaaggctcccagggcatcaagcc 24643237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 39828333 - 39828288
Alignment:
Q  203 ttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    ||||||||||||||||||  ||| ||||||||||||||||||||||    
T  39828333 ttgactatgcaacttaattctcttaatcatgcatgtggtaccaatc 39828288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 24643306 - 24643278
Alignment:
Q  255 gtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||    
T  24643306 gtaaataggctcccagggcatcaagccct 24643278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 154; Significance: 1e-81; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 23594220 - 23594063
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23594220 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaacttgacaacttaacctcttgactatgcaacttaatcttct 23594121  T
Q  226 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23594120 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 23594063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 21475572 - 21475415
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21475572 agaatcacagctttaaacaatttcatgatttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaacttaatcttct 21475473  T
Q  226 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21475472 aatcatgcatgtggtaccaatctttgagcgtaaataggctcctagggcatcaagccct 21475415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 13988579 - 13988744
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  13988579 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 13988678  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13988679 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccaagggcatcaagccct 13988744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 21923784 - 21923619
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  21923784 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 21923685  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21923684 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccaagggcatcaagccct 21923619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 126 - 250
Target Start/End: Original strand, 41372783 - 41372907
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| || ||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  41372783 agaatcacagctttaaacaatttcatgatttaacaactcgacaacttgataacttgacaacttgacaacttaacctattgactatgcaacttaatcttct 41372882  T
Q  226 aatcatgcatgtggtaccaatcttt 250  Q
    |||||||||||||||||||||||||    
T  41372883 aatcatgcatgtggtaccaatcttt 41372907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 13988455 - 13988505
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13988455 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 13988505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 21475696 - 21475646
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21475696 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 21475646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 21923908 - 21923858
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21923908 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 21923858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 23594344 - 23594294
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23594344 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 23594294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 41372659 - 41372709
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  41372659 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 41372709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 21711589 - 21711624
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  21711589 tttgagcgtaaataggctcccagggcatcaagccct 21711624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 22123387 - 22123352
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  22123387 tttgagcgtaaataggctcccagggcatcaagccct 22123352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 22123430 - 22123395
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  22123430 tttgagcgtaaataggctcccagggcatcaagccct 22123395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 27161782 - 27161747
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  27161782 tttgagcgtaaataggctcccagggcatcaagccct 27161747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 40389037 - 40389072
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  40389037 tttgagcgtaaataggctcccagggcatcaagccct 40389072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 431559 - 431593
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||    
T  431559 ttgagcgtaaataggctcccagggcatcaagccct 431593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 20316158 - 20316204
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  20316158 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatc 20316204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 21043659 - 21043613
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  21043659 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatc 21043613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 22118556 - 22118602
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  22118556 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 22118602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 23967569 - 23967603
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||    
T  23967569 ttgagcgtaaataggctcccagggcatcaagccct 23967603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 48520036 - 48520082
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  48520036 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatc 48520082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 246
Target Start/End: Original strand, 23967499 - 23967544
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaat 246  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||    
T  23967499 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaat 23967544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 283
Target Start/End: Original strand, 40388996 - 40389028
Alignment:
Q  251 gagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||    
T  40388996 gagcgtaaataggctcccagggcatcaagccct 40389028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 284
Target Start/End: Original strand, 20587650 - 20587685
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccctt 284  Q
    |||||||||||||||||| |||||||||||||||||    
T  20587650 ttgagcgtaaataggctcacagggcatcaagccctt 20587685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 284
Target Start/End: Original strand, 20592188 - 20592223
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccctt 284  Q
    |||||||||||||||||| |||||||||||||||||    
T  20592188 ttgagcgtaaataggctcacagggcatcaagccctt 20592223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 21923610 - 21923575
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  21923610 tttgagcgtaaaaaggctcccagggcatcaagccct 21923575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 23594054 - 23594019
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  23594054 tttgagcgtaaaaaggctcccagggcatcaagccct 23594019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 29297937 - 29297972
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||| ||||||||||||||||    
T  29297937 tttgagcgtaaataggctcacagggcatcaagccct 29297972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 31612111 - 31612146
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||| |||||||||||||||    
T  31612111 tttgagcgtaaataggctcctagggcatcaagccct 31612146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 31612155 - 31612190
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||| ||||    
T  31612155 tttgagcgtaaataggctcccagggcatcaaaccct 31612190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 20316228 - 20316262
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||| |||||||||||||    
T  20316228 ttgagcgtaaataggctcccaaggcatcaagccct 20316262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 35088395 - 35088429
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  35088395 ttgagcgtaaataggctcacagggcatcaagccct 35088429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 47190382 - 47190427
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  47190382 cttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 47190427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 52954694 - 52954649
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  52954694 cttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 52954649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 20957935 - 20957979
Alignment:
Q  204 tgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||    
T  20957935 tgactctgcaacttattcttcttaatcatgcatgtggtaccaatc 20957979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 245
Target Start/End: Complemental strand, 35982211 - 35982167
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaa 245  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||    
T  35982211 cttgactatgcaacttcaacttcttaatcatgcatgtggtaccaa 35982167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 150; Significance: 3e-79; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 10733424 - 10733268
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10733424 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 10733325  T
Q  226 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10733324 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 10733268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 29348131 - 29348287
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29348131 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 29348230  T
Q  226 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29348231 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 29348287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 29350604 - 29350760
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29350604 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 29350703  T
Q  226 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29350704 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 29350760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 42245849 - 42245693
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42245849 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 42245750  T
Q  226 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42245749 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 42245693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 129 - 283
Target Start/End: Complemental strand, 265258 - 265096
Alignment:
Q  129 atcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaacttaat 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  265258 atcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaacttaat 265159  T
Q  221 cttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  265158 cttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 265096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 20908681 - 20908846
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||        ||||||||||||||||||||||||||||||    
T  20908681 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcaacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 20908780  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  20908781 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcctagggcatcaagccct 20908846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 29345650 - 29345814
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  29345650 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 29345749  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29345750 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 29345814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 126 - 246
Target Start/End: Original strand, 39363084 - 39363196
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  39363084 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaact--------tgacaacttaacctcttgactatgcaacttaatcttct 39363175  T
Q  226 aatcatgcatgtggtaccaat 246  Q
    |||||||||||||||||||||    
T  39363176 aatcatgcatgtggtaccaat 39363196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 126 - 249
Target Start/End: Original strand, 31143957 - 31144074
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaact--taatctt 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||  |||||||    
T  31143957 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaact--------tgacaacttaacctcttgactatgcaacttataatctt 31144048  T
Q  224 ctaatcatgcatgtggtaccaatctt 249  Q
    ||||||||||||||||||||||||||    
T  31144049 ctaatcatgcatgtggtaccaatctt 31144074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 202 - 280
Target Start/End: Original strand, 39244889 - 39244967
Alignment:
Q  202 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  39244889 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccatgccatcaagc 39244967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 126 - 247
Target Start/End: Complemental strand, 2155105 - 2155000
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||                ||||||||||||||||||||||||    
T  2155105 agaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaa----------------cttgactatgcaacttaatcttct 2155022  T
Q  226 aatcatgcatgtggtaccaatc 247  Q
    ||||||||||||||||||||||    
T  2155021 aatcatgcatgtggtaccaatc 2155000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 265378 - 265328
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  265378 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 265328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 10733548 - 10733498
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10733548 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 10733498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 20908557 - 20908607
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20908557 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 20908607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 29345526 - 29345576
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29345526 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 29345576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 29348007 - 29348057
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29348007 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 29348057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 29350480 - 29350530
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29350480 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 29350530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 31143833 - 31143883
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31143833 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 31143883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 42245973 - 42245923
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42245973 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 42245923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 39362960 - 39363010
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  39362960 tacatttaacaacataagcatcatcaatcatacttaacaactcatagacaa 39363010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 11581563 - 11581528
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  11581563 tttgagcgtaaataggctcccagggcatcaagccct 11581528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 14047921 - 14047956
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  14047921 tttgagcgtaaataggctcccagggcatcaagccct 14047956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 14047965 - 14048000
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  14047965 tttgagcgtaaataggctcccagggcatcaagccct 14048000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 20918309 - 20918274
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  20918309 tttgagcgtaaataggctcccagggcatcaagccct 20918274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 22411986 - 22412021
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  22411986 tttgagcgtaaataggctcccagggcatcaagccct 22412021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 36155062 - 36155027
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  36155062 tttgagcgtaaataggctcccagggcatcaagccct 36155027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 26733166 - 26733120
Alignment:
Q  202 cttgactatgcaacttaatcttc-taatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||||| || |||||||||||||||||||||||    
T  26733166 cttgactatgcaacttaatcctcataatcatgcatgtggtaccaatc 26733120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 283
Target Start/End: Original strand, 24066993 - 24067025
Alignment:
Q  251 gagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||    
T  24066993 gagcgtaaataggctcccagggcatcaagccct 24067025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 265087 - 265052
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  265087 tttgagcgtaaaaaggctcccagggcatcaagccct 265052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 2154933 - 2154898
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  2154933 tttgagcgtaaaaaggctcccagggcatcaagccct 2154898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 2154976 - 2154941
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||| ||||||||||||||||||||||||||||    
T  2154976 tttgagcataaataggctcccagggcatcaagccct 2154941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 11581519 - 11581484
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||| |||||||    
T  11581519 tttgagcgtaaataggctcccagggcatgaagccct 11581484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 20908855 - 20908890
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  20908855 tttgagcgtaaaaaggctcccagggcatcaagccct 20908890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 283
Target Start/End: Original strand, 22412033 - 22412064
Alignment:
Q  252 agcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||    
T  22412033 agcgtaaataggctcccagggcatcaagccct 22412064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 247
Target Start/End: Complemental strand, 23202900 - 23202861
Alignment:
Q  208 tatgcaacttaatcttctaatcatgcatgtggtaccaatc 247  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  23202900 tatgcaacttcaacttctaatcatgcatgtggtaccaatc 23202861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 247
Target Start/End: Original strand, 23469549 - 23469592
Alignment:
Q  205 gactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||    
T  23469549 gactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 23469592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 29329734 - 29329769
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||| ||||    
T  29329734 tttgagcgtaaataggctcccagggcatcaaaccct 29329769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 29345823 - 29345858
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  29345823 tttgagcgtaaaaaggctcccagggcatcaagccct 29345858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 29348296 - 29348331
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  29348296 tttgagcgtaaaaaggctcccagggcatcaagccct 29348331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 29350769 - 29350804
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  29350769 tttgagcgtaaaaaggctcccagggcatcaagccct 29350804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 42245684 - 42245649
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  42245684 tttgagcgtaaaaaggctcccagggcatcaagccct 42245649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 15796166 - 15796212
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||||    
T  15796166 cttgactatgcaactctatcttcttaatcatgcatgtggtaccaatc 15796212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 21309098 - 21309064
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  21309098 ttgagcgtaaataggctcacagggcatcaagccct 21309064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 21732304 - 21732259
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  21732304 cttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 21732259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 21809955 - 21809910
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  21809955 cttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 21809910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 26741022 - 26740976
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||||    
T  26741022 cttgactatccaacttaatcctcttaatcatgcatgtggtaccaatc 26740976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 16227522 - 16227563
Alignment:
Q  208 tatgcaacttaatcttct-aatcatgcatgtggtaccaatct 248  Q
    |||||||||||||| ||| |||||||||||||||||||||||    
T  16227522 tatgcaacttaatcctcttaatcatgcatgtggtaccaatct 16227563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 283
Target Start/End: Complemental strand, 18319310 - 18319278
Alignment:
Q  251 gagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||| ||||||||||||||||    
T  18319310 gagcgtaaataggctctcagggcatcaagccct 18319278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 25743507 - 25743554
Alignment:
Q  202 cttgactatgcaacttaatcttct--aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||  |||||||  ||||||||||||||||||||||    
T  25743507 cttgactatgcaactctatcttcttaaatcatgcatgtggtaccaatc 25743554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 280
Target Start/End: Original strand, 29329777 - 29329809
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagc 280  Q
    |||||||||||| ||||||||||||||||||||    
T  29329777 tttgagcgtaaaaaggctcccagggcatcaagc 29329809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 150; Significance: 3e-79; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 16454765 - 16454609
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16454765 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 16454666  T
Q  226 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16454665 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 16454609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 9708099 - 9707934
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  9708099 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 9708000  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9707999 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 9707934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 34158995 - 34159160
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  34158995 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 34159094  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34159095 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 34159160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 55500620 - 55500776
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  55500620 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcaacaacttgacaacttgacaacttaacttcttgactatgcaacttaatcttct 55500719  T
Q  226 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  55500720 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ctagggcatcaagccct 55500776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 17462847 - 17463012
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  17462847 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 17462946  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17462947 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcctagggcatcaagccct 17463012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 45607384 - 45607235
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  45607384 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttga--------caacttaacctcttgactatgcaacttaatcttct 45607293  T
Q  226 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45607292 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 45607235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 129 - 283
Target Start/End: Complemental strand, 13152265 - 13152119
Alignment:
Q  129 atcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttctaat 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  13152265 atcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttga--------caacttaacctcttgactatgcaacttaatcttctaat 13152174  T
Q  229 catgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13152173 catgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 13152119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 129 - 283
Target Start/End: Complemental strand, 13154730 - 13154584
Alignment:
Q  129 atcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttctaat 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  13154730 atcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttga--------caacttaacctcttgactatgcaacttaatcttctaat 13154639  T
Q  229 catgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13154638 catgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 13154584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 7781801 - 7781637
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  7781801 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataactggacaacttgacaacttaacctcttgactatgcaactt 7781702  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7781701 aatcttctaaacatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 7781637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 10248199 - 10248051
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  10248199 agaatcacagctttcaacaatttcatgatttaacaacttaacaactcgacaacttga--------caacttaacctcttgactatgcaacttaatcttct 10248108  T
Q  226 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10248107 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 10248051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 126 - 246
Target Start/End: Original strand, 55476191 - 55476303
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  55476191 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaact--------tgacaacttaacctcttgactatgcaacttaatcttct 55476282  T
Q  226 aatcatgcatgtggtaccaat 246  Q
    |||||||||||||||||||||    
T  55476283 aatcatgcatgtggtaccaat 55476303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 15977236 - 15977346
Alignment:
Q  173 gacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccaggg 272  Q
    ||||||| || |||| |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15977236 gacaactcgacaactcgacaacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcataaataggctcccaggg 15977335  T
Q  273 catcaagccct 283  Q
    |||||||||||    
T  15977336 catcaagccct 15977346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 178 - 283
Target Start/End: Complemental strand, 6469563 - 6469458
Alignment:
Q  178 cttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatca 277  Q
    ||||| |||| |||||||| ||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6469563 cttgacaactcgacaacttgacaacttgattatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccaggacatca 6469464  T
Q  278 agccct 283  Q
    ||||||    
T  6469463 agccct 6469458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 202 - 283
Target Start/End: Complemental strand, 45578247 - 45578166
Alignment:
Q  202 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  45578247 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcctagggcatcaagccct 45578166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 178 - 283
Target Start/End: Complemental strand, 28849043 - 28848939
Alignment:
Q  178 cttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatca 277  Q
    ||||| |||| |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  28849043 cttgacaactcgacaacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcataaataggct-ccagggcatca 28848945  T
Q  278 agccct 283  Q
    ||||||    
T  28848944 agccct 28848939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 158 - 248
Target Start/End: Complemental strand, 29173059 - 29172969
Alignment:
Q  158 acaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatct 248  Q
    ||||||| |||||| || ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29173059 acaacttgacaacttgataacttgacaactcgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatct 29172969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 166 - 247
Target Start/End: Original strand, 21618184 - 21618266
Alignment:
Q  166 acaactcgacaa-cttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 247  Q
    |||||| ||||| ||||| |||| |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  21618184 acaacttgacaatcttgacaactcgacaacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 21618266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 7781925 - 7781875
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7781925 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 7781875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 13152392 - 13152342
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13152392 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 13152342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 16454889 - 16454839
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16454889 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 16454839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 17462723 - 17462773
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17462723 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 17462773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 34158871 - 34158921
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34158871 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 34158921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 166 - 247
Target Start/End: Original strand, 36166290 - 36166372
Alignment:
Q  166 acaactcgacaa-cttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 247  Q
    |||||| ||||| ||||| |||| ||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  36166290 acaacttgacaatcttgacaactcgacgacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 36166372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 45607508 - 45607458
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  45607508 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 45607458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 55476067 - 55476117
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  55476067 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 55476117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 55500496 - 55500546
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  55500496 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 55500546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 13154857 - 13154809
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagac 50  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13154857 tacatttaacaacataagcatcatcaatcatatttaacaactcatagac 13154809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 15555360 - 15555411
Alignment:
Q  1 gtacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  15555360 gtacatttaacaacataagcatcatcaatcatatttaacaattcatagacaa 15555411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 9708223 - 9708173
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  9708223 tacatttaacaacataaacatcatcaatcatatttaacaactcatagacaa 9708173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 10248324 - 10248273
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcata-tttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  10248324 tacatttaacaacataagcatcatcaatcatagtttaacaactcatagacaa 10248273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 8898894 - 8898929
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  8898894 tttgagcgtaaataggctcccagggcatcaagccct 8898929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 21618290 - 21618325
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  21618290 tttgagcgtaaataggctcccagggcatcaagccct 21618325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 24153484 - 24153449
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  24153484 tttgagcgtaaataggctcccagggcatcaagccct 24153449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 36166396 - 36166431
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  36166396 tttgagcgtaaataggctcccagggcatcaagccct 36166431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 41123690 - 41123725
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  41123690 tttgagcgtaaataggctcccagggcatcaagccct 41123725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 9577449 - 9577495
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  9577449 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 9577495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 43890116 - 43890082
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||    
T  43890116 ttgagcgtaaataggctcccagggcatcaagccct 43890082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 15206668 - 15206725
Alignment:
Q  191 caacttaacctcttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||  |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  15206668 caacttaacaacttgactatgcaacttaaacctcttaatcatgcatgtggtaccaatc 15206725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 6469449 - 6469414
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  6469449 tttgagcgtaaaaaggctcccagggcatcaagccct 6469414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 7781628 - 7781593
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  7781628 tttgagcgtaaaaaggctcccagggcatcaagccct 7781593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 10248042 - 10248007
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  10248042 tttgagcgtaaaaaggctcccagggcatcaagccct 10248007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 284
Target Start/End: Complemental strand, 13031857 - 13031822
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccctt 284  Q
    |||||||||||||||||| |||||||||||||||||    
T  13031857 ttgagcgtaaataggctcacagggcatcaagccctt 13031822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 13152110 - 13152075
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  13152110 tttgagcgtaaaaaggctcccagggcatcaagccct 13152075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 13154575 - 13154540
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  13154575 tttgagcgtaaaaaggctcccagggcatcaagccct 13154540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 15977355 - 15977390
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  15977355 tttgagcgtaaaaaggctcccagggcatcaagccct 15977390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 16283130 - 16283095
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  16283130 tttgagcgtaaaaaggctcccagggcatcaagccct 16283095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 16283173 - 16283138
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||| ||||||||    
T  16283173 tttgagcgtaaataggctcccagggcaacaagccct 16283138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 16454600 - 16454565
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  16454600 tttgagcgtaaaaaggctcccagggcatcaagccct 16454565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 17447016 - 17446981
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||| ||||    
T  17447016 tttgagcgtaaataggctcccagggcatcaatccct 17446981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 17463021 - 17463056
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  17463021 tttgagcgtaaaaaggctcccagggcatcaagccct 17463056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 28848930 - 28848895
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  28848930 tttgagcgtaaaaaggctcccagggcatcaagccct 28848895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 29172903 - 29172868
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||| |||||||||||||||||||||||||||||    
T  29172903 tttgagtgtaaataggctcccagggcatcaagccct 29172868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 29172946 - 29172911
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||| ||||||||||||||||||||||||||||||    
T  29172946 tttgaacgtaaataggctcccagggcatcaagccct 29172911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 162
Target Start/End: Complemental strand, 29173107 - 29173072
Alignment:
Q  127 gaatcacagctttaaacaatttcatgatttaacaac 162  Q
    ||||||||||||||||||||||||| ||||||||||    
T  29173107 gaatcacagctttaaacaatttcataatttaacaac 29173072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 34159169 - 34159204
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  34159169 tttgagcgtaaaaaggctcccagggcatcaagccct 34159204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 36166440 - 36166475
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  36166440 tttgagcgtaaaaaggctcccagggcatcaagccct 36166475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 45578157 - 45578122
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  45578157 tttgagcgtaaaaaggctcccagggcatcaagccct 45578122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 45607226 - 45607191
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  45607226 tttgagcgtaaaaaggctcccagggcatcaagccct 45607191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 45796756 - 45796821
Alignment:
Q  225 taatcatgcatgtggtaccaatct-------ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||        |||||||||||||||||||||| ||||||||||||    
T  45796756 taatcatgcatgtggtaccaatcaaatcatattgagcgtaaataggctcccagagcatcaagccct 45796821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 55500785 - 55500820
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  55500785 tttgagcgtaaaaaggctcccagggcatcaagccct 55500820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 9707925 - 9707891
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||| |||||||||||||||||||||||    
T  9707925 ttgagcgtaaaaaggctcccagggcatcaagccct 9707891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 12377703 - 12377749
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  12377703 cttgactatgcaacttaaacctcttaatcatgcatgtggtaccaatc 12377749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 13919110 - 13919156
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  13919110 cttgactatgcaacttaaacctcttaatcatgcatgtggtaccaatc 13919156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 14497133 - 14497167
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||| ||||||||||||    
T  14497133 ttgagcgtaaataggctcccagagcatcaagccct 14497167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 14507824 - 14507858
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  14507824 ttgagcgtaaataggctcacagggcatcaagccct 14507858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 15245761 - 15245807
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  15245761 cttgactatgcaacttaaacctcttaatcatgcatgtggtaccaatc 15245807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 15264882 - 15264928
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  15264882 cttgactatgcaacttaaacctcttaatcatgcatgtggtaccaatc 15264928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 15932586 - 15932552
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  15932586 ttgagcgtaaataggctcacagggcatcaagccct 15932552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 17538050 - 17538084
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  17538050 ttgagcgtaaataggctcacagggcatcaagccct 17538084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 17548647 - 17548613
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  17548647 ttgagcgtaaataggctcacagggcatcaagccct 17548613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 279
Target Start/End: Complemental strand, 18700806 - 18700776
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaag 279  Q
    |||||||||||||||||||||||||||||||    
T  18700806 ttgagcgtaaataggctcccagggcatcaag 18700776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 22307692 - 22307658
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  22307692 ttgagcgtaaataggctcacagggcatcaagccct 22307658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 32404527 - 32404482
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  32404527 cttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 32404482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 40806916 - 40806950
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  40806916 ttgagcgtaaataggctcacagggcatcaagccct 40806950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 41173451 - 41173417
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  41173451 ttgagcgtaaataggctcacagggcatcaagccct 41173417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 146; Significance: 6e-77; HSPs: 3)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 13624 - 13781
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13624 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcgacttaatcttct 13723  T
Q  226 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  13724 aatcatgcatgtggtaccaatctttgagcgcaaataggctcctagggcatcaagccct 13781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 13500 - 13550
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13500 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 13550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 13790 - 13825
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  13790 tttgagcgtaaaaaggctcccagggcatcaagccct 13825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 146; Significance: 6e-77; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 1541395 - 1541239
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1541395 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaacttgacaacttaacctcttgactatgcaacttaatcttct 1541296  T
Q  226 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1541295 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 1541239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 12741995 - 12742151
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12741995 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaacttgacaacttaacctcttgactatgcaacttaatcttct 12742094  T
Q  226 aatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12742095 aatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 12742151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 2291673 - 2291508
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  2291673 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 2291574  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2291573 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 2291508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 8054698 - 8054863
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  8054698 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 8054797  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8054798 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 8054863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 18335085 - 18334920
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  18335085 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 18334986  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18334985 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 18334920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 19004715 - 19004880
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  19004715 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 19004814  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19004815 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 19004880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 24422216 - 24422381
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  24422216 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 24422315  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24422316 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 24422381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 33863947 - 33864112
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  33863947 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 33864046  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33864047 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 33864112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 22781941 - 22782105
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  22781941 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 22782040  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22782041 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 22782105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 33861464 - 33861628
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  33861464 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 33861563  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33861564 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 33861628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 26925132 - 26924968
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 217  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  26925132 agaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 26925033  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26925032 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 26924968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 126 - 247
Target Start/End: Complemental strand, 25591249 - 25591120
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgac--------aacttaacctcttgactatgcaactt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||        ||||||||||||||||||||||||||    
T  25591249 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaatttgataacttgacaactcgacaacttaacctcttgactatgcaactt 25591150  T
Q  218 aatcttctaatcatgcatgtggtaccaatc 247  Q
    ||||||||||||||||||||||||||||||    
T  25591149 aatcttctaatcatgcatgtggtaccaatc 25591120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 126 - 247
Target Start/End: Original strand, 25688245 - 25688358
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||        ||||||||||| ||||||||||||    
T  25688245 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaactcgataacttgacaa--------cttgactatgccacttaatcttct 25688336  T
Q  226 aatcatgcatgtggtaccaatc 247  Q
    ||||||||||||||||||||||    
T  25688337 aatcatgcatgtggtaccaatc 25688358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 153 - 283
Target Start/End: Complemental strand, 19859378 - 19859247
Alignment:
Q  153 atttaacaacttaacaactcgacaa-cttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttg 251  Q
    ||||| |||||| |||||| ||||| ||||| |||| |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19859378 atttatcaacttgacaacttgacaatcttgacaactcgacaacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttg 19859279  T
Q  252 agcgtaaataggctcccagggcatcaagccct 283  Q
    || |||||||| |||| |||||||||||||||    
T  19859278 agtgtaaatagactcctagggcatcaagccct 19859247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 25656472 - 25656528
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttga 182  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25656472 agaataacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttga 25656528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 25714170 - 25714233
Alignment:
Q  184 aacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 247  Q
    |||| |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  25714170 aactcgacaacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 25714233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 2291797 - 2291747
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2291797 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 2291747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 8054574 - 8054624
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8054574 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 8054624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 12741871 - 12741921
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12741871 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 12741921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 18335209 - 18335159
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18335209 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 18335159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 19004591 - 19004641
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19004591 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 19004641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 22781817 - 22781867
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22781817 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 22781867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 24422092 - 24422142
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24422092 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 24422142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 26925256 - 26925206
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26925256 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 26925206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 33861340 - 33861390
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  33861340 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 33861390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 33863823 - 33863873
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  33863823 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 33863873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 25656524 - 25656569
Alignment:
Q  202 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  25656524 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 25656569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 25714136 - 25714192
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttga 182  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||    
T  25714136 agaatcacagctttaaacaatttcatgatttaacaactcgacaacttgacaacttga 25714192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 1541520 - 1541469
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcata-tttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  1541520 tacatttaacaacataagcatcatcaatcatagtttaacaactcatagacaa 1541469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 20557255 - 20557219
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccctt 284  Q
    |||||||||||||||||||||||||||||||||||||    
T  20557255 tttgagcgtaaataggctcccagggcatcaagccctt 20557219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 20557212 - 20557177
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  20557212 tttgagcgtaaataggctcccagggcatcaagccct 20557177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 25688382 - 25688417
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  25688382 tttgagcgtaaataggctcccagggcatcaagccct 25688417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 25714300 - 25714335
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  25714300 tttgagcgtaaataggctcccagggcatcaagccct 25714335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 17230031 - 17229985
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  17230031 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatc 17229985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 17742939 - 17742985
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  17742939 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatc 17742985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 245
Target Start/End: Original strand, 20136415 - 20136459
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaa 245  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||    
T  20136415 cttgactatgcaacttcatcttcttaatcatgcatgtggtaccaa 20136459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 245
Target Start/End: Complemental strand, 22196454 - 22196410
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaa 245  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||    
T  22196454 cttgactatgcaacttcatcttcttaatcatgcatgtggtaccaa 22196410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 1595349 - 1595384
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||| ||||||||||||||||    
T  1595349 tttgagcgtaaataggctctcagggcatcaagccct 1595384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 1595392 - 1595427
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  1595392 tttgagcgtaaaaaggctcccagggcatcaagccct 1595427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 12742160 - 12742195
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  12742160 tttgagcgtaaaaaggctcccagggcatcaagccct 12742195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 16448806 - 16448771
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||| ||||||||||||||||||||||||||||||    
T  16448806 tttgaccgtaaataggctcccagggcatcaagccct 16448771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 18334911 - 18334876
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  18334911 tttgagcgtaaaaaggctcccagggcatcaagccct 18334876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 19004889 - 19004924
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  19004889 tttgagcgtaaaaaggctcccagggcatcaagccct 19004924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 19859238 - 19859203
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  19859238 tttgagcgtaaaaaggctcccagggcatcaagccct 19859203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 24422390 - 24422425
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  24422390 tttgagcgtaaaaaggctcccagggcatcaagccct 24422425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 26924959 - 26924924
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  26924959 tttgagcgtaaaaaggctcccagggcatcaagccct 26924924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 33861637 - 33861672
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  33861637 tttgagcgtaaaaaggctcccagggcatcaagccct 33861672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 33864121 - 33864156
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  33864121 tttgagcgtaaaaaggctcccagggcatcaagccct 33864156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 16492893 - 16492938
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  16492893 cttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 16492938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 18896685 - 18896640
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  18896685 cttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 18896640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 35007894 - 35007939
Alignment:
Q  202 cttgactatgcaacttaatcttc-taatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||    
T  35007894 cttgactatgcaacttaa-cttcttaatcatgcatgtggtaccaatc 35007939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 283
Target Start/End: Complemental strand, 16448847 - 16448815
Alignment:
Q  251 gagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||| |||||||||||||    
T  16448847 gagcgtaaataggctcccaaggcatcaagccct 16448815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 18178048 - 18178001
Alignment:
Q  202 cttgactatgcaacttaatcttct--aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||  |||||||  ||||||||||||||||||||||    
T  18178048 cttgactatgcaactctatcttcttaaatcatgcatgtggtaccaatc 18178001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 141; Significance: 6e-74; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 1837996 - 1837837
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctct--tgactatgcaacttaatctt 223  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  1837996 agaatcacagctttaaacaatttcatgatttaacaacttaccaactcgacaacttgacaacttgacaacttaacctctcttgactatgcaacttaatctt 1837897  T
Q  224 ctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1837896 ctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 1837837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 18239912 - 18239747
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  18239912 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 18239813  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18239812 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 18239747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 50222832 - 50222667
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  50222832 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 50222733  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50222732 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 50222667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 14718459 - 14718294
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 217  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  14718459 agaatcacaactttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 14718360  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14718359 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 14718294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 15118845 - 15118680
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  15118845 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 15118746  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15118745 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctccaagggcatcaagccct 15118680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 126 - 250
Target Start/End: Complemental strand, 12033624 - 12033500
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12033624 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 12033525  T
Q  226 aatcatgcatgtggtaccaatcttt 250  Q
    |||||||||||||||||||||||||    
T  12033524 aatcatgcatgtggtaccaatcttt 12033500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 44614957 - 44615122
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgac-tatgcaact 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||| |||||||||    
T  44614957 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgacctatgcaact 44615056  T
Q  217 taatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  44615057 taatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 44615122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 3514715 - 3514865
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  3514715 agaatcacaactttaaacaatttcatgatttaactacttaacaactcgacaacttgataacttgacaa--------cttgactatgcaacttaatcttct 3514806  T
Q  226 aatcatgcatgtggtaccaatc--tttgagcgtaaataggctcccagggcatcaagccct 283  Q
     ||||||||||||||||||| |   |||||||||||||||||| ||| ||||||||||||    
T  3514807 -atcatgcatgtggtaccaaccatattgagcgtaaataggctctcagtgcatcaagccct 3514865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 166 - 283
Target Start/End: Complemental strand, 44773533 - 44773415
Alignment:
Q  166 acaactcgacaa-cttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggc 264  Q
    |||||| ||||| ||||| |||| |||||||| ||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44773533 acaacttgacaatcttgacaactcgacaacttgacaacttgactatgcaacttaatcttctaatcaagcatgtggtaccaatctttgagcgtaaataggc 44773434  T
Q  265 tcccagggcatcaagccct 283  Q
    |||||||||||||||||||    
T  44773433 tcccagggcatcaagccct 44773415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 184 - 283
Target Start/End: Complemental strand, 7641609 - 7641510
Alignment:
Q  184 aacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||| |||||||| ||  ||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7641609 aactcgacaacttgacaacttgactatgcaacttaatcttctaacattgcatgtggtaccaatctttgagcgtaaataggctcctagggcatcaagccct 7641510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 29267332 - 29267433
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgat--------aacttgacaacttaacctcttgactatgcaactt 217  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  29267332 agaatcacagctttaagcaatttcatgatttaactacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 29267431  T
Q  218 aa 219  Q
    ||    
T  29267432 aa 29267433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 248
Target Start/End: Complemental strand, 15355759 - 15355668
Alignment:
Q  158 acaacttaacaactcgacaacttgataa-cttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatct 248  Q
    |||||||| ||||||||||| |||| || ||||||||||  ||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  15355759 acaacttatcaactcgacaatttgacaatcttgacaactcgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatct 15355668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 12033748 - 12033698
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12033748 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 12033698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 14739666 - 14739616
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14739666 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 14739616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 15118969 - 15118919
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15118969 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 15118919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 29267208 - 29267258
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29267208 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 29267258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 44614833 - 44614883
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  44614833 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 44614883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 50222956 - 50222906
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  50222956 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 50222906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 1838118 - 1838070
Alignment:
Q  4 catttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1838118 catttaacaacataagcatcatcaatcatatttaacaactcatagacaa 1838070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 18240036 - 18239986
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  18240036 tacatttaacaacataagcatcatcgatcatatttaacaactcatagacaa 18239986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 14280196 - 14280231
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  14280196 tttgagcgtaaataggctcccagggcatcaagccct 14280231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 15355645 - 15355610
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  15355645 tttgagcgtaaataggctcccagggcatcaagccct 15355610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 20149712 - 20149747
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  20149712 tttgagcgtaaataggctcccagggcatcaagccct 20149747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 15791428 - 15791474
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  15791428 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 15791474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 26045671 - 26045625
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  26045671 cttgactatgcaacttattcttcttaatcatgcatgtggtaccaatc 26045625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 26050852 - 26050806
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  26050852 cttgactatgcaacttattcttcttaatcatgcatgtggtaccaatc 26050806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 283
Target Start/End: Original strand, 14280155 - 14280187
Alignment:
Q  251 gagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||    
T  14280155 gagcgtaaataggctcccagggcatcaagccct 14280187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 38106974 - 38107014
Alignment:
Q  12 aacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    ||||||| |||||||||||||||||||||||||| ||||||    
T  38106974 aacataaacatcatcaatcatatttaacaactcatagacaa 38107014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 1837828 - 1837793
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  1837828 tttgagcgtaaaaaggctcccagggcatcaagccct 1837793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 7641501 - 7641466
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  7641501 tttgagcgtaaaaaggctcccagggcatcaagccct 7641466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 8575186 - 8575151
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||| ||||    
T  8575186 tttgagcgtaaataggctcccagggcatcaaaccct 8575151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 15118671 - 15118636
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  15118671 tttgagcgtaaaaaggctcccagggcatcaagccct 15118636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 18215594 - 18215559
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||| |||||||||||||||||||||||||||||    
T  18215594 tttgagggtaaataggctcccagggcatcaagccct 18215559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 18239738 - 18239703
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  18239738 tttgagcgtaaaaaggctcccagggcatcaagccct 18239703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 29267463 - 29267498
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  29267463 tttgagcgtaaaaaggctcccagggcatcaagccct 29267498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 32850970 - 32851035
Alignment:
Q  225 taatcatgcatgtggtaccaatct-------ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||        |||||||||||||||||||||| ||||||||||||    
T  32850970 taatcatgcatgtggtaccaatcaaatcatattgagcgtaaataggctcccagagcatcaagccct 32851035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 44102094 - 44102129
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||| ||||||||||||||||    
T  44102094 tttgagcgtaaataggctctcagggcatcaagccct 44102129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 44615131 - 44615166
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  44615131 tttgagcgtaaaaaggctcccagggcatcaagccct 44615166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 50222658 - 50222623
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  50222658 tttgagcgtaaaaaggctcccagggcatcaagccct 50222623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 52312310 - 52312345
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||| ||||||||||||    
T  52312310 tttgagcgtaaataggctcccagagcatcaagccct 52312345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 52312353 - 52312388
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  52312353 tttgagcgtaaaaaggctcccagggcatcaagccct 52312388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 54799030 - 54798995
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  54799030 tttgagcgtaaaaaggctcccagggcatcaagccct 54798995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 54799074 - 54799039
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||| ||||    
T  54799074 tttgagcgtaaataggctcccagggcatcaaaccct 54799039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 282
Target Start/End: Complemental strand, 12588 - 12554
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccc 282  Q
    |||||||||||| ||||||||||||||||||||||    
T  12588 tttgagcgtaaaaaggctcccagggcatcaagccc 12554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 15869238 - 15869178
Alignment:
Q  225 taatcatgcatgtggtaccaatc--tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||   ||||||||||||||||||  |  ||||||||||||    
T  15869238 taatcatgcatgtggtaccaatcatattgagcgtaaataggctcttatagcatcaagccct 15869178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 245
Target Start/End: Original strand, 15098938 - 15098982
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaa 245  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||    
T  15098938 cttgactatgcaacttcaacttcttaatcatgcatgtggtaccaa 15098982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 245
Target Start/End: Original strand, 19736381 - 19736425
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaa 245  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||    
T  19736381 cttgactatgcaactacatcttcttaatcatgcatgtggtaccaa 19736425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 279
Target Start/End: Original strand, 20149671 - 20149699
Alignment:
Q  251 gagcgtaaataggctcccagggcatcaag 279  Q
    |||||||||||||||||||||||||||||    
T  20149671 gagcgtaaataggctcccagggcatcaag 20149699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 137; Significance: 1e-71; HSPs: 3)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 20416 - 20581
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  20416 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 20515  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20516 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 20581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 20292 - 20342
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20292 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 20342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 20590 - 20625
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  20590 tttgagcgtaaaaaggctcccagggcatcaagccct 20625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 137; Significance: 1e-71; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 94080 - 94245
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  94080 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 94179  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  94180 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 94245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 93956 - 94006
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  93956 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 94006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 284
Target Start/End: Original strand, 44297 - 44333
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccctt 284  Q
    |||||||||||| ||||||||||||||||||||||||    
T  44297 tttgagcgtaaaaaggctcccagggcatcaagccctt 44333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 94254 - 94289
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  94254 tttgagcgtaaaaaggctcccagggcatcaagccct 94289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 137; Significance: 1e-71; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 1484071 - 1484236
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  1484071 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 1484170  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1484171 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 1484236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 20402896 - 20403061
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  20402896 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 20402995  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20402996 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 20403061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 129 - 283
Target Start/End: Original strand, 22001426 - 22001588
Alignment:
Q  129 atcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaacttaat 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  22001426 atcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaacttaat 22001525  T
Q  221 cttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22001526 cttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 22001588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 4542865 - 4542701
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  4542865 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 4542766  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  4542765 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 4542701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 5853784 - 5853620
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactt--------aacctcttgactatgcaactt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  5853784 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 5853685  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  5853684 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 5853620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 14823444 - 14823608
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  14823444 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 14823543  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14823544 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 14823608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 126 - 246
Target Start/End: Original strand, 4482981 - 4483093
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  4482981 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaact--------tgacaacttaacctcttgactatgcaacttaatcttct 4483072  T
Q  226 aatcatgcatgtggtaccaat 246  Q
    |||||||||||||||||||||    
T  4483073 aatcatgcatgtggtaccaat 4483093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 166 - 283
Target Start/End: Complemental strand, 20046597 - 20046479
Alignment:
Q  166 acaactcgacaa-cttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggc 264  Q
    |||||| ||||| ||||| |||| |||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20046597 acaacttgacaatcttgacaactcgacaacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggc 20046498  T
Q  265 tcccagggcatcaagccct 283  Q
    |||||||||||||||||||    
T  20046497 tcccagggcatcaagccct 20046479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 126 - 246
Target Start/End: Complemental strand, 18678517 - 18678390
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgac--------aacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||        ||||||||||||||||||||||||||    
T  18678517 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaacttgacaactcgacaacttaacctcttgactatgcaactt 18678418  T
Q  218 aatcttctaatcatgcatgtggtaccaat 246  Q
    |  | ||| || |||||||||||||||||    
T  18678417 agacctcttat-atgcatgtggtaccaat 18678390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 126 - 246
Target Start/End: Complemental strand, 18717706 - 18717579
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgac--------aacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||        ||||||||||||||||||||||||||    
T  18717706 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaacttgacaactcgacaacttaacctcttgactatgcaactt 18717607  T
Q  218 aatcttctaatcatgcatgtggtaccaat 246  Q
    |  | ||| || |||||||||||||||||    
T  18717606 agacctcttat-atgcatgtggtaccaat 18717579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 158 - 246
Target Start/End: Complemental strand, 26225725 - 26225636
Alignment:
Q  158 acaacttaacaactcgacaacttgataa-cttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaat 246  Q
    |||||||| |||||||||||||||| || ||||||||||  ||  |||||| ||||||||||||||||||||||||||||||||||||||    
T  26225725 acaacttaccaactcgacaacttgacaatcttgacaactcgacaacttgacaatgcaacttaatcttctaatcatgcatgtggtaccaat 26225636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 246
Target Start/End: Original strand, 26219445 - 26219534
Alignment:
Q  158 acaacttaacaactcgacaacttgataa-cttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaat 246  Q
    |||||||| | |||||||||||||| || ||||||||||  ||  |||||| ||||||||||||||||||||||||||||||||||||||    
T  26219445 acaacttatccactcgacaacttgacaatcttgacaactcgacaacttgacaatgcaacttaatcttctaatcatgcatgtggtaccaat 26219534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 1483947 - 1483997
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1483947 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 1483997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 4482857 - 4482907
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4482857 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 4482907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 4542989 - 4542939
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4542989 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 4542939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 5853908 - 5853858
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5853908 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 5853858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 14823320 - 14823370
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14823320 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 14823370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 18678641 - 18678591
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18678641 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 18678591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 18717830 - 18717780
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18717830 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 18717780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 20402772 - 20402822
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20402772 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 20402822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 22001306 - 22001356
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22001306 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 22001356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 15203593 - 15203558
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  15203593 tttgagcgtaaataggctcccagggcatcaagccct 15203558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 26225611 - 26225576
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  26225611 tttgagcgtaaataggctcccagggcatcaagccct 26225576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 37515270 - 37515313
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtacca 244  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  37515270 cttgactatgcaacttaatcttctaaatcatgcatgtggtacca 37515313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 45291058 - 45291023
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  45291058 tttgagcgtaaataggctcccagggcatcaagccct 45291023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 18833179 - 18833225
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  18833179 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatc 18833225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 18833248 - 18833282
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||    
T  18833248 ttgagcgtaaataggctcccagggcatcaagccct 18833282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 20502478 - 20502432
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  20502478 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 20502432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 22253541 - 22253495
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  22253541 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatc 22253495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 22963789 - 22963743
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  22963789 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 22963743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 28397293 - 28397339
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  28397293 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 28397339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 280
Target Start/End: Original strand, 19896065 - 19896097
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagc 280  Q
    |||||||||||||||||||||||||||||||||    
T  19896065 tttgagcgtaaataggctcccagggcatcaagc 19896097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 1484245 - 1484280
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  1484245 tttgagcgtaaaaaggctcccagggcatcaagccct 1484280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 4542692 - 4542657
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  4542692 tttgagcgtaaaaaggctcccagggcatcaagccct 4542657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 5853611 - 5853576
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  5853611 tttgagcgtaaaaaggctcccagggcatcaagccct 5853576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 19896108 - 19896143
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  19896108 tttgagcgtaaaaaggctcccagggcatcaagccct 19896143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 20403070 - 20403105
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  20403070 tttgagcgtaaaaaggctcccagggcatcaagccct 20403105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 22001597 - 22001632
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  22001597 tttgagcgtaaaaaggctcccagggcatcaagccct 22001632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 41598031 - 41598066
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||| ||||||||||||||||||||||||||||    
T  41598031 tttgagcataaataggctcccagggcatcaagccct 41598066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 22382110 - 22382064
Alignment:
Q  202 cttgactatgcaacttaatcttc-taatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||||    
T  22382110 cttgactatgcaactttatcttcttaatcatgcatgtgttaccaatc 22382064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 22525302 - 22525348
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  22525302 cttgactatgcaacttaaacctcttaatcatgcatgtggtaccaatc 22525348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 22984028 - 22984074
Alignment:
Q  202 cttgactatgcaacttaatcttc-taatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||||| || ||||||||||| |||||||||||    
T  22984028 cttgactatgcaacttaatcctcttaatcatgcatatggtaccaatc 22984074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 22995586 - 22995632
Alignment:
Q  202 cttgactatgcaacttaatcttc-taatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||||| || ||||||||||| |||||||||||    
T  22995586 cttgactatgcaacttaatcctcttaatcatgcatttggtaccaatc 22995632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 39937142 - 39937108
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  39937142 ttgagcgtaaataggctcgcagggcatcaagccct 39937108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 23667670 - 23667714
Alignment:
Q  203 ttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||    
T  23667670 ttgactatgcaactta-tcttcttaatcatgcatgtggtaccaatc 23667714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 133; Significance: 4e-69; HSPs: 2)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 13061 - 13226
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  13061 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 13160  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13161 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcctagggcatcaagccct 13226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 12937 - 12987
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12937 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 12987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 133; Significance: 4e-69; HSPs: 3)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 9418 - 9583
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||    
T  9418 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgacaacttgacaacttgacaacttaacctcttgactatgcaactt 9517  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9518 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 9583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 9294 - 9344
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9294 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 9344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 9591 - 9626
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  9591 tttgagcgtaaataggctcccagggcatcaagccct 9626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 129; Significance: 9e-67; HSPs: 3)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 40070 - 40234
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  40070 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 40169  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  40170 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 40234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 39946 - 39996
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39946 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 39996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 40243 - 40278
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  40243 tttgagcgtaaaaaggctcccagggcatcaagccct 40278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 129; Significance: 9e-67; HSPs: 10)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 136350 - 136514
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  136350 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 136449  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  136450 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 136514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 138819 - 138983
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  138819 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 138918  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  138919 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 138983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 143757 - 143921
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  143757 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 143856  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  143857 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 143921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 133881 - 134045
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  133881 agaatcacagctttaaacaatttcatgatttcacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 133980  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  133981 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 134045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 141288 - 141452
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  141288 agaatcacagctttaaacaatttcatgatttcacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 141387  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  141388 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccagggcatcaagccct 141452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 133757 - 133807
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  133757 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 133807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 136226 - 136276
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  136226 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 136276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 138695 - 138745
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  138695 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 138745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 141164 - 141214
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  141164 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 141214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 143633 - 143683
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  143633 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 143683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 125; Significance: 2e-64; HSPs: 3)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 37491 - 37655
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataact--------tgacaacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  37491 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttgacaacttaacctcttgactatgcaactt 37590  T
Q  218 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  37591 aatcttctaatcatgcatgtggtaccaatctttgagcgtaaataggct-ccaaggcatcaagccct 37655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 37367 - 37417
Alignment:
Q  2 tacatttaacaacataagcatcatcaatcatatttaacaactcacagacaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37367 tacatttaacaacataagcatcatcaatcatatttaacaactcatagacaa 37417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 37664 - 37699
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  37664 tttgagcgtaaaaaggctcccagggcatcaagccct 37699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 101; Significance: 4e-50; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 126 - 247
Target Start/End: Complemental strand, 158924 - 158795
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgac--------aacttaacctcttgactatgcaactt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||    
T  158924 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaactcgacaacttaacctcttgactatgcaactt 158825  T
Q  218 aatcttctaatcatgcatgtggtaccaatc 247  Q
    ||||||||||||||||||||||||||||||    
T  158824 aatcttctaatcatgcatgtggtaccaatc 158795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 158770 - 158735
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||| |||||||||||||    
T  158770 tttgagcgtaaataggctcccaaggcatcaagccct 158735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 4393 - 4552
Alignment:
Q  126 agaatcacagctttaaacaatttcatgatttaacaacttaacaactcgacaacttgataacttgacaacttaacctcttgactatgcaacttaatcttct 225  Q
    ||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||| ||||||| ||||| ||  |||||| |||||||||||||||||    
T  4393 agaatcacaactttaaaaaatttcatgatttaactacttaacaactcgacaacttgacaacttgataacttgacaacttgacaatgcaacttaatcttct 4492  T
Q  226 aatcatgcatgtggtaccaatc--tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||| |   |||||||||||||||||| ||| |||| |||||||    
T  4493 aatcatgcatgtggtaccaaccatattgagcgtaaataggctctcagagcattaagccct 4552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 47; Significance: 7e-18; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 166 - 247
Target Start/End: Original strand, 116154 - 116236
Alignment:
Q  166 acaactcgacaa-cttgataacttgacaacttaacctcttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 247  Q
    |||||| ||||| ||||| ||||  ||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  116154 acaacttgacaatcttgacaactcaacaacttgacaacttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 116236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 116265 - 116300
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  116265 tttgagcgtaaataggctcccagggcatcaagccct 116300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 282
Target Start/End: Original strand, 116309 - 116343
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccc 282  Q
    |||||||||||| ||||||||||||||||||||||    
T  116309 tttgagcgtaaaaaggctcccagggcatcaagccc 116343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 8824 - 8767
Alignment:
Q  225 taatcatgcatgtggtaccaatctt--tgagcgtaaataggctcccagggcatcaagc 280  Q
    ||||||||||||||||||||||| |  ||||||||||||||||||||| |||||||||    
T  8824 taatcatgcatgtggtaccaatcatattgagcgtaaataggctcccagagcatcaagc 8767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 52286 - 52251
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  52286 tttgagcgtaaataggctcccagggcatcaagccct 52251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 9677 - 9737
Alignment:
Q  225 taatcatgcatgtggtaccaatctt--tgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||| |  ||||||||||||||||| ||| ||||||||||||    
T  9677 taatcatgcatgtggtaccaatcatattgagcgtaaataggctctcagagcatcaagccct 9737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 16664 - 16699
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  16664 tttgagcgtaaataggctcccagggcatcaagccct 16699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 248 - 281
Target Start/End: Original strand, 16577 - 16610
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagcc 281  Q
    ||||||||||||||||||||||||||||||||||    
T  16577 tttgagcgtaaataggctcccagggcatcaagcc 16610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 16620 - 16655
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||| ||||||||||||||||||||||||||||    
T  16620 tttgagcataaataggctcccagggcatcaagccct 16655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 15514 - 15479
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  15514 tttgagcgtaaataggctcccagggcatcaagccct 15479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 30137 - 30172
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  30137 tttgagcgtaaataggctcccagggcatcaagccct 30172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 30181 - 30216
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||| |||||||||||||||||||||||    
T  30181 tttgagcgtaaaaaggctcccagggcatcaagccct 30216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 3041 - 2995
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  3041 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatc 2995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 9915 - 9961
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  9915 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 9961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 1637 - 1683
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  1637 cttgactatgcaactttatcttcttaatcatgcatgtggtaccaatc 1683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 8633 - 8679
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  8633 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 8679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 17247 - 17293
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  17247 cttgactatgcaacttattcttcttaatcatgcatgtggtaccaatc 17293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 282
Target Start/End: Complemental strand, 45027 - 44993
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagccc 282  Q
    |||||||||||||||||||||||||||||||||||    
T  45027 tttgagcgtaaataggctcccagggcatcaagccc 44993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 10882 - 10928
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  10882 cttgactatgcaacttcatcttcttaatcatgcatgtggtaccaatc 10928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 104006 - 103962
Alignment:
Q  202 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||||| ||| || ||||||||||||||||||    
T  104006 cttgactatgcaacttaatcctcttat-atgcatgtggtaccaatc 103962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 38492 - 38446
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  38492 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 38446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 6758 - 6804
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  6758 cttgactatgcaacttattcttcttaatcatgcatgtggtaccaatc 6804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 247
Target Start/End: Original strand, 394 - 436
Alignment:
Q  206 actatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    ||||||||||||| |||||| ||||||||||||||||||||||    
T  394 actatgcaacttattcttcttaatcatgcatgtggtaccaatc 436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 497206 - 497252
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  497206 cttgactatgcaacttaatcctcttaatcatgcatgtggtaccaatc 497252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 282
Target Start/End: Original strand, 76629 - 76662
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccc 282  Q
    |||||||||||||||||| |||||||||||||||    
T  76629 ttgagcgtaaataggctcacagggcatcaagccc 76662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 283
Target Start/End: Complemental strand, 1557 - 1525
Alignment:
Q  251 gagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||||||||||||    
T  1557 gagcgtaaataggctcccagggcatcaagccct 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 284
Target Start/End: Complemental strand, 6820 - 6785
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccctt 284  Q
    |||||||||||||||||| |||||||||||||||||    
T  6820 ttgagcgtaaataggctcacagggcatcaagccctt 6785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 6778 - 6744
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  6778 ttgagcgtaaataggctcacagggcatcaagccct 6744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 283
Target Start/End: Original strand, 6406 - 6437
Alignment:
Q  252 agcgtaaataggctcccagggcatcaagccct 283  Q
    ||||||||||||||||||||||||||||||||    
T  6406 agcgtaaataggctcccagggcatcaagccct 6437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 281
Target Start/End: Original strand, 6445 - 6478
Alignment:
Q  248 tttgagcgtaaataggctcccagggcatcaagcc 281  Q
    |||||||||||| |||||||||||||||||||||    
T  6445 tttgagcgtaaaaaggctcccagggcatcaagcc 6478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 248
Target Start/End: Complemental strand, 12049 - 12002
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatct 248  Q
    |||||||||||||||| ||||||| ||||||||| |||||||||||||    
T  12049 cttgactatgcaactttatcttcttaatcatgcacgtggtaccaatct 12002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 13151 - 13216
Alignment:
Q  225 taatcatgcatgtggtaccaatct-------ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||        |||||||||||||||||||||| ||||||||||||    
T  13151 taatcatgcatgtggtaccaatcaaatcatattgagcgtaaataggctcccagagcatcaagccct 13216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 24853 - 24918
Alignment:
Q  225 taatcatgcatgtggtaccaatct-------ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||||||||        |||||||||||||||||||||| ||||||||||||    
T  24853 taatcatgcatgtggtaccaatcaaatcatattgagcgtaaataggctcccagagcatcaagccct 24918  T

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Target: scaffold0914 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 1444 - 1490
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  1444 cttgactatgcaacttaaacctcttaatcatgcatgtggtaccaatc 1490  T

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Target: scaffold0453 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 2149 - 2195
Alignment:
Q  202 cttgactatgcaacttaatcttc-taatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||||| || ||||||||||||||||| |||||    
T  2149 cttgactatgcaacttaatcctcttaatcatgcatgtggtagcaatc 2195  T

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Target: scaffold0375 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 9434 - 9400
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  9434 ttgagcgtaaataggctcacagggcatcaagccct 9400  T

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Target: scaffold0371 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 2803 - 2837
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  2803 ttgagcgtaaataggctcacagggcatcaagccct 2837  T

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Target: scaffold0278 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 10850 - 10805
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  10850 cttgactatgcaacttaa-cttcttaatcatgcatgtggtaccaatc 10805  T

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Target: scaffold0111 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 7234 - 7268
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  7234 ttgagcgtaaataggctcacagggcatcaagccct 7268  T

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Target: scaffold0111; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 14353 - 14387
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  14353 ttgagcgtaaataggctcacagggcatcaagccct 14387  T

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Target: scaffold0064 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 57720 - 57754
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  57720 ttgagcgtaaataggctcacagggcatcaagccct 57754  T

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Target: scaffold0061 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 19551 - 19517
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  19551 ttgagcgtaaataggctcacagggcatcaagccct 19517  T

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Target: scaffold0058 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 745 - 711
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||| ||||||||||||||||||||||||||||    
T  745 ttgagcataaataggctcccagggcatcaagccct 711  T

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Target: scaffold0058; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 816 - 769
Alignment:
Q  202 cttgactatgcaacttaatcttc--taatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||| ||||||  |||||||||| ||||||||||||    
T  816 cttgactatgcaactttatcttccttaatcatgcaagtggtaccaatc 769  T

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Target: scaffold0047 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 78006 - 78040
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  78006 ttgagcgtaaataggctcacagggcatcaagccct 78040  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 78484 - 78450
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaagccct 283  Q
    |||||||||||||||||| ||||||||||||||||    
T  78484 ttgagcgtaaataggctcacagggcatcaagccct 78450  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 106064 - 106110
Alignment:
Q  202 cttgactatgcaacttaatcttct-aatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  106064 cttgactatgcaacttaaacctcttaatcatgcatgtggtaccaatc 106110  T

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Target: scaffold0601 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 278
Target Start/End: Complemental strand, 7974 - 7945
Alignment:
Q  249 ttgagcgtaaataggctcccagggcatcaa 278  Q
    ||||||||||||||||||||||||||||||    
T  7974 ttgagcgtaaataggctcccagggcatcaa 7945  T

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Target: scaffold0413 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 12314 - 12358
Alignment:
Q  202 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||||| ||| || ||||||||||||||||||    
T  12314 cttgactatgcaacttaatcctcttat-atgcatgtggtaccaatc 12358  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 136759 - 136715
Alignment:
Q  202 cttgactatgcaacttaatcttctaatcatgcatgtggtaccaatc 247  Q
    |||||||||||||||||||| ||| || ||||||||||||||||||    
T  136759 cttgactatgcaacttaatcctcttat-atgcatgtggtaccaatc 136715  T

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