View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16994_low_18 (Length: 215)

Name: NF16994_low_18
Description: NF16994
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16994_low_18
NF16994_low_18
[»] chr3 (26 HSPs)
chr3 (1-211)||(1683235-1683445)
chr3 (1-206)||(6095813-6096020)
chr3 (1-206)||(46860218-46860426)
chr3 (1-206)||(34490960-34491167)
chr3 (1-206)||(36018598-36018805)
chr3 (1-179)||(43402032-43402211)
chr3 (1-206)||(49199684-49199892)
chr3 (1-206)||(40913085-40913293)
chr3 (1-206)||(30235872-30236079)
chr3 (1-179)||(43403975-43404154)
chr3 (1-206)||(54593452-54593658)
chr3 (1-204)||(41819740-41819942)
chr3 (1-206)||(47303999-47304205)
chr3 (3-206)||(4569700-4569905)
chr3 (1-206)||(55302179-55302386)
chr3 (1-204)||(34795617-34795819)
chr3 (11-206)||(5434092-5434289)
chr3 (112-206)||(26323290-26323385)
chr3 (1-186)||(35138941-35139127)
chr3 (34-204)||(20937438-20937607)
chr3 (1-91)||(28074364-28074453)
chr3 (120-206)||(39127413-39127499)
chr3 (3-84)||(26323850-26323931)
chr3 (143-211)||(36796686-36796754)
chr3 (41-84)||(39127346-39127389)
chr3 (49-122)||(36796206-36796279)
[»] chr5 (19 HSPs)
chr5 (1-206)||(40147008-40147215)
chr5 (1-206)||(5057795-5058001)
chr5 (1-206)||(38746752-38746959)
chr5 (1-206)||(27015279-27015486)
chr5 (1-206)||(213215-213419)
chr5 (1-206)||(28278062-28278270)
chr5 (1-206)||(27637828-27638036)
chr5 (1-183)||(316513-316692)
chr5 (1-183)||(4160381-4160562)
chr5 (1-206)||(14689626-14689828)
chr5 (1-163)||(33906288-33906449)
chr5 (102-206)||(16641155-16641260)
chr5 (1-206)||(35615919-35616122)
chr5 (4-91)||(30802691-30802778)
chr5 (1-88)||(10055040-10055127)
chr5 (1-91)||(16642209-16642297)
chr5 (1-188)||(21205885-21206073)
chr5 (130-204)||(8019464-8019537)
chr5 (4-88)||(30792990-30793073)
[»] chr7 (20 HSPs)
chr7 (1-206)||(4512604-4512810)
chr7 (1-206)||(2390029-2390236)
chr7 (1-206)||(6431718-6431925)
chr7 (36-206)||(2361186-2361356)
chr7 (10-206)||(4508920-4509117)
chr7 (10-206)||(4510762-4510959)
chr7 (1-204)||(34310932-34311137)
chr7 (1-206)||(3258743-3258948)
chr7 (1-206)||(29608488-29608690)
chr7 (36-206)||(48599548-48599719)
chr7 (1-206)||(6360126-6360333)
chr7 (34-206)||(8359531-8359705)
chr7 (3-206)||(22328612-22328818)
chr7 (1-200)||(22269722-22269921)
chr7 (11-199)||(23794049-23794244)
chr7 (1-170)||(5116382-5116551)
chr7 (102-172)||(22552683-22552753)
chr7 (4-169)||(43363667-43363830)
chr7 (106-199)||(1360375-1360470)
chr7 (1-69)||(22552791-22552858)
[»] chr6 (13 HSPs)
chr6 (1-206)||(21593413-21593618)
chr6 (1-206)||(603294-603501)
chr6 (1-206)||(2973153-2973360)
chr6 (1-206)||(3808923-3809130)
chr6 (1-206)||(17762734-17762943)
chr6 (1-206)||(22425042-22425248)
chr6 (2-206)||(5043376-5043581)
chr6 (1-206)||(26830338-26830545)
chr6 (36-164)||(17757865-17757995)
chr6 (110-206)||(5741005-5741102)
chr6 (110-206)||(11660464-11660559)
chr6 (143-206)||(25073457-25073521)
chr6 (8-91)||(26800525-26800607)
[»] chr1 (33 HSPs)
chr1 (1-206)||(34603323-34603529)
chr1 (1-206)||(11348445-11348652)
chr1 (1-206)||(37033287-37033494)
chr1 (1-203)||(34602557-34602760)
chr1 (1-206)||(37168044-37168251)
chr1 (1-203)||(7482449-7482652)
chr1 (1-206)||(47114919-47115125)
chr1 (1-206)||(42298189-42298396)
chr1 (1-206)||(193359-193565)
chr1 (1-206)||(28242136-28242342)
chr1 (1-206)||(37879125-37879332)
chr1 (1-206)||(29135995-29136201)
chr1 (36-206)||(19754274-19754448)
chr1 (36-200)||(31925926-31926091)
chr1 (4-206)||(41135571-41135773)
chr1 (1-204)||(19752433-19752637)
chr1 (1-206)||(13547303-13547510)
chr1 (1-206)||(13549214-13549421)
chr1 (1-204)||(47255556-47255755)
chr1 (128-210)||(3331428-3331509)
chr1 (38-184)||(12318719-12318864)
chr1 (4-206)||(16216712-16216911)
chr1 (36-207)||(4535683-4535860)
chr1 (50-206)||(6808243-6808399)
chr1 (1-70)||(28318110-28318180)
chr1 (108-172)||(6068447-6068511)
chr1 (1-170)||(9109653-9109822)
chr1 (106-206)||(22079174-22079274)
chr1 (1-164)||(27558471-27558634)
chr1 (12-83)||(6068376-6068447)
chr1 (106-157)||(25651937-25651988)
chr1 (36-86)||(38747052-38747102)
chr1 (114-202)||(41053158-41053245)
[»] chr4 (37 HSPs)
chr4 (1-206)||(6655703-6655910)
chr4 (1-206)||(379126-379332)
chr4 (1-206)||(35662189-35662394)
chr4 (3-206)||(55085579-55085784)
chr4 (1-206)||(41964164-41964368)
chr4 (1-206)||(26364012-26364219)
chr4 (1-206)||(33989610-33989815)
chr4 (1-206)||(8665154-8665361)
chr4 (1-206)||(50674060-50674267)
chr4 (1-206)||(54882767-54882974)
chr4 (1-206)||(50262912-50263119)
chr4 (3-206)||(12073142-12073346)
chr4 (1-206)||(8647885-8648092)
chr4 (1-148)||(40630731-40630878)
chr4 (1-211)||(33089646-33089846)
chr4 (1-206)||(46703248-46703453)
chr4 (34-206)||(12119320-12119491)
chr4 (1-181)||(34112359-34112539)
chr4 (1-198)||(3785838-3786034)
chr4 (107-206)||(41961264-41961364)
chr4 (1-183)||(27417199-27417372)
chr4 (1-206)||(22882967-22883173)
chr4 (1-206)||(22934631-22934837)
chr4 (1-147)||(46569821-46569967)
chr4 (1-211)||(35370548-35370758)
chr4 (116-204)||(2209575-2209665)
chr4 (102-206)||(32091327-32091431)
chr4 (1-91)||(2209455-2209545)
chr4 (1-164)||(22629147-22629309)
chr4 (1-206)||(35369656-35369860)
chr4 (36-206)||(26699660-26699831)
chr4 (1-91)||(38811410-38811499)
chr4 (50-211)||(6200073-6200235)
chr4 (104-181)||(8832044-8832121)
chr4 (150-206)||(40632342-40632399)
chr4 (44-84)||(41961198-41961237)
chr4 (137-169)||(54571043-54571075)
[»] chr2 (14 HSPs)
chr2 (1-206)||(45726677-45726883)
chr2 (1-206)||(1631946-1632153)
chr2 (1-206)||(42288324-42288530)
chr2 (10-206)||(35447098-35447295)
chr2 (1-206)||(24397804-24398007)
chr2 (1-206)||(17450338-17450544)
chr2 (1-211)||(42261821-42262030)
chr2 (1-202)||(33647916-33648118)
chr2 (45-211)||(30218245-30218410)
chr2 (1-112)||(7451047-7451158)
chr2 (110-200)||(43731004-43731093)
chr2 (1-67)||(34811585-34811651)
chr2 (1-87)||(24197646-24197731)
chr2 (1-58)||(40935543-40935600)
[»] scaffold0286 (1 HSPs)
scaffold0286 (1-206)||(11305-11512)
[»] scaffold0466 (1 HSPs)
scaffold0466 (1-196)||(7075-7272)
[»] chr8 (19 HSPs)
chr8 (1-204)||(11383733-11383938)
chr8 (1-206)||(40328526-40328733)
chr8 (1-206)||(40221492-40221699)
chr8 (1-206)||(42435205-42435412)
chr8 (2-206)||(44353540-44353746)
chr8 (55-206)||(4283325-4283478)
chr8 (50-198)||(40585522-40585669)
chr8 (106-206)||(18655253-18655354)
chr8 (1-197)||(3846045-3846238)
chr8 (102-210)||(10020295-10020402)
chr8 (1-119)||(2999823-2999941)
chr8 (1-204)||(10101370-10101580)
chr8 (110-178)||(33655548-33655616)
chr8 (1-89)||(22976281-22976368)
chr8 (1-68)||(28461308-28461375)
chr8 (55-143)||(9633816-9633904)
chr8 (131-206)||(10240037-10240109)
chr8 (1-67)||(10020187-10020254)
chr8 (36-84)||(3817670-3817718)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-206)||(80497-80704)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-211)||(490656-490865)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-200)||(18222-18422)
[»] scaffold0197 (1 HSPs)
scaffold0197 (1-206)||(1612-1826)


Alignment Details
Target: chr3 (Bit Score: 191; Significance: 1e-104; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 1683235 - 1683445
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  1683235 tgaatcttggagaaccaaaagagaaggtttttcggaaagggttggtgcattttgggaagagattcatggggttggaaaacacatgagtggataatcattt 1683334  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttggggttagaatctagagttgg 200  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1683335 atgagcaactttggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttggggttagaatctagagttgg 1683434  T
Q  201 gaaacaccttg 211  Q
    |||||||||||    
T  1683435 gaaacaccttg 1683445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 6096020 - 6095813
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtt-tttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | ||| | ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| | |||||    
T  6096020 tgaatcttggagaaccaaaagagggggctcttttgaaaagggttggtgccttttgggga-agattcatggggttgggaaacacatgagtggagagtcatt 6095922  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| ||||||||||||||||||||| |||||||||||||||||||||  |||||||| ||||| |||||||| |||||| ||||||||| ||||||||    
T  6095921 tgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaatgctaaaggttggttctcttttgggggttagattctagagt 6095822  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  6095821 tgggaaaca 6095813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 46860218 - 46860426
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | || ||||| |||||||||| ||||||||| |||||||| ||| ||||||||||||||||||| | |||||    
T  46860218 tgaatcttggagaaccaaaagagggggctcttgggaaaagggttggtgccttttgggga-agattcatagggatgggaaacacatgagtggagagtcatt 46860316  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggcta--agggttggttatctttt-ggggttagaatctagag 196  Q
    | ||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||  |||||||||| |||||| ||||||||| |||||||    
T  46860317 tgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttaggaaatcaaagactaagagggttggttctcttttgggggttagattctagag 46860416  T
Q  197 ttgggaaaca 206  Q
    ||| ||||||    
T  46860417 ttgagaaaca 46860426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 34490960 - 34491167
Alignment:
Q  1 tgaatcttggagaaccaaaagaggagg-tttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | ||  | ||||||||||||| |||||| || |||||||||| ||||  ||||||||||||||| | |||||    
T  34490960 tgaatcttggagaaccaaaagagggggctcttgtgaaaagggttggtgccttttggaga-agattcatggagttgaaaaacacatgagtggagagtcatt 34491058  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| ||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| |||||| ||||||||| ||||||||    
T  34491059 tgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagt 34491158  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  34491159 tgggaaaca 34491167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 36018598 - 36018805
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    ||||||||||||||||||||||||  | |||| ||||| |||||||||| ||||||||| |||| ||||||| |||||||||||||| |||| | |||||    
T  36018598 tgaatcttggagaaccaaaagagggagcttttgggaaaagggttggtgccttttgggga-agatccatggggatgggaaacacatgaatggagagtcatt 36018696  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatcttttgggg-ttagaatctagagt 197  Q
    | ||| ||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||| || |||||| |||||||||| ||||| ||||||||    
T  36018697 tgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctatggattggttctcttttggggtttagattctagagt 36018796  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  36018797 tgggaaaca 36018805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 43402211 - 43402032
Alignment:
Q  1 tgaatcttggagaaccaaaagaggagg-tttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | ||  | ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  43402211 tgaatcttggagaaccaaaagagggggctcttgagaaaagggttggtgccttttgggga-agattcatggggttgggaaacacatgagtggagaatcatt 43402113  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt 179  Q
    | |||||||||||||| |||||||||| |||||||||||||||||||||  ||||||||||||| ||||||||| ||||||    
T  43402112 tgtgaacaacttgggtaagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctatgggttggttctctttt 43402032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 49199892 - 49199684
Alignment:
Q  1 tgaatcttggagaaccaaaagaggagg-tttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | ||  | ||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||| | || ||    
T  49199892 tgaatcttggagaaccaaaagagggggctattgtgaaaagggttggtgccttttgggga-agattcatggggttgggaaacatatgagtggagagtcttt 49199794  T
Q  100 tatgaacaacttggg-tgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagag 196  Q
    | ||| ||||||||| |||||||||||| |||||||||||||||||||||  |||||||||||||| |||||||| |||||| ||||||||| |||||||    
T  49199793 tgtgagcaacttgggttgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaatggttggttctcttttgggggttagattctagag 49199694  T
Q  197 ttgggaaaca 206  Q
    ||||||||||    
T  49199693 ttgggaaaca 49199684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 40913085 - 40913293
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | || ||||| |||||||||| |||| ||   |||||||||||||||||||||||||||||||| | |||||    
T  40913085 tgaatcttggagaaccaaaagagggggctcttgggaaaagggttggtgcctttttggagaagattcatggggttgggaaacacatgagtggagagtcatt 40913184  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| ||| ||||||||||||||||| | |||||||||||||||||||  |||| ||||| |||||||||||| |||||| ||||||||| ||||||||    
T  40913185 tgtgagcaaattgggtgagtcttgtgaaagcaaaagagaagatccttagtgaaattaaaggttaagggttggttctcttttgggggttagattctagagt 40913284  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  40913285 tgggaaaca 40913293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 30235872 - 30236079
Alignment:
Q  1 tgaatcttggagaaccaaaagaggagg-tttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | ||  | ||||||||||||| ||||||||| | |||||||||||||| ||||||| ||||||| | |||||    
T  30235872 tgaatcttggagaaccaaaagagggggctcttgtgaaaagggttggtgccttttgggga-atattcatggggttggaaaacacaagagtggagagtcatt 30235970  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| ||| ||||||||||||||||| |||||||||||||||||||||  ||||| |||||||| | |||||| |||||| ||||||||| ||||||||    
T  30235971 tgtgagcaagttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcgaaggctaatgattggttctcttttgggggttagattctagagt 30236070  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  30236071 tgggaaaca 30236079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 43404154 - 43403975
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | || ||||| |||||||||| ||||||||| |||||||||||||||| ||||||||||||||| | |||||    
T  43404154 tgaatcttggagaaccaaaagagggggctcttgggaaaagggttggtgccttttgggga-agattcatggggttggaaaacacatgagtggagagtcatt 43404056  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt 179  Q
    |  || ||||||||||||||||||||| || ||||||||||||||||||  ||||||||||||| ||||||||| ||||||    
T  43404055 tgggagcaacttgggtgagtcttgtgaaactaaaagagaagatccttagtgaaatcaaaggctatgggttggttctctttt 43403975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 54593452 - 54593658
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | || ||||| |||||||| | ||||||||| |||||||||||| ||| ||||||||||||||| | || ||    
T  54593452 tgaatcttggagaaccaaaagagggggctcttgggaaaagggttggtaccttttgggga-agattcatggggatggaaaacacatgagtggagagtcttt 54593550  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| ||||||| ||||||||||||| ||||||| |||||||||||||  ||||||||||||||||||| ||| |||||| ||||||||| ||||||||    
T  54593551 tgtgagcaacttgagtgagtcttgtgaaaccaaaatagaagatccttagtgaaatcaaaggctaagggtt-gttctcttttgggggttagattctagagt 54593649  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  54593650 tgggaaaca 54593658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 41819942 - 41819740
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||| ||||||||||||||| || | || ||||| |||||||||| ||||||| |||  ||||||||||||||||||||||||||||| | |||||    
T  41819942 tgaatcttagagaaccaaaagagggggctcttgggaaaagggttggtgccttttgggaaga--ttcatggggttgggaaacacatgagtggagactcatt 41819845  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagtt 198  Q
    | ||| ||||||| ||||||||| ||| |||||||||||||||| |||  |||||||| |||||||||||||| |||||| | ||||||| |||||||||    
T  41819844 tgtgagcaacttgagtgagtcttatgaaaccaaaagagaagatctttatgaaatcaaa-gctaagggttggttctcttttagcggttagattctagagtt 41819746  T
Q  199 gggaaa 204  Q
    ||||||    
T  41819745 gggaaa 41819740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 47303999 - 47304205
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | || ||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||| | |  ||    
T  47303999 tgaatcttggagaaccaaaagagggggctcttgggaaaagggttggtgccttttgggga-agattcatggggttgggaaacacatgagtggagagt-ttt 47304096  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| |||||| |||||||||||| | |||||||||||| ||||||||  ||||||||  ||||||||||||| |||||| ||||||||| ||||||||    
T  47304097 tgtgagcaacttaggtgagtcttgtaaaaccaaaagagaatatccttagtgaaatcaaaaactaagggttggttctcttttgggggttagattctagagt 47304196  T
Q  198 tgggaaaca 206  Q
    ||| |||||    
T  47304197 tggaaaaca 47304205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 3 - 206
Target Start/End: Original strand, 4569700 - 4569905
Alignment:
Q  3 aatcttggagaaccaaaagaggaggtttttcggaaagggttg-gtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattta 101  Q
    |||||||||||| ||||||||| || | || ||||| ||  | |||| | ||||||| |||||||||||||||||||||||||||||||| | || |||     
T  4569700 aatcttggagaatcaaaagagggggctcttgggaaaagggggtgtgcctattgggga-agattcatggggttgggaaacacatgagtggagagtcttttg 4569798  T
Q  102 tgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatcttttgg-ggttagaatctagagttg 199  Q
    ||| ||||||||||||||||||||| ||||||||||| |||| ||||  ||||||||||||||||||||||| |||||||| ||||||| ||||||||||    
T  4569799 tgagcaacttgggtgagtcttgtgaaaccaaaagagatgatctttagtgaaatcaaaggctaagggttggttctcttttggtggttagattctagagttg 4569898  T
Q  200 ggaaaca 206  Q
    | |||||    
T  4569899 gaaaaca 4569905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 55302386 - 55302179
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    ||||||||||||||||||||||||  | | || ||||| |||||||||| ||||||| | | ||||||| |||||| ||||||||||||||| | || ||    
T  55302386 tgaatcttggagaaccaaaagagggagctcttgggaaaagggttggtgccttttgggaaaa-attcatgaggttggaaaacacatgagtggagattcttt 55302288  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatcttttg-gggttagaatctagagt 197  Q
    | ||| ||||||| ||||||||||||| |||||||||||||||||||||  ||||||||||||| ||||||||| |||||||  ||||||| | ||||||    
T  55302287 tgtgagcaacttgagtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaggggttggttctcttttgtaggttagattatagagt 55302188  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  55302187 tgggaaaca 55302179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 34795617 - 34795819
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    ||||||||||||||||| |||||| |||| |  ||| ||| ||  ||| ||||| |||||||||||||||||||||| |||||| |  ||| | |  |||    
T  34795617 tgaatcttggagaaccagaagagggggttctagggagaggtttcatgccttttgaggagagattcatggggttgggatacacatcaaaggagagtt-ttt 34795715  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttggggttagaatctagagttgg 200  Q
     | |  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||| | |||| ||||||    
T  34795716 gtaagaaacttgggtgagtcttgggagaccaaaagagaagatccttagaaaatcaaaggctaagggatggttctcttttgtggttaaattctaaagttgg 34795815  T
Q  201 gaaa 204  Q
    ||||    
T  34795816 gaaa 34795819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 206
Target Start/End: Complemental strand, 5434289 - 5434092
Alignment:
Q  11 agaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatttatgaacaac 109  Q
    |||||||||||||| || | || ||||| ||||| |||  |||| ||||||||||||||||||| ||||||||||||||||| | || ||| ||| |||     
T  5434289 agaaccaaaagagggggctcttgggaaaagggttagtgttttttagggagagattcatggggttaggaaacacatgagtggagagtcttttgtgagcaag 5434190  T
Q  110 ttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagttgggaaaca 206  Q
    |||||||||||||| || ||||||||||||||||||||   |||||||| |||| | ||| || |||||| ||||||||| | |||||||||||||||    
T  5434189 ttgggtgagtcttgggaaaccaaaagagaagatccttatgtaatcaaagactaaagattgattctcttttgggggttagattatagagttgggaaaca 5434092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 26323385 - 26323290
Alignment:
Q  112 gggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttg-gggttagaatctagagttgggaaaca 206  Q
    |||||||||||| |||||||||| |||| |||||||| |||||||| |||||||||||||| ||||||| |||||||| | |||||||||||||||    
T  26323385 gggtgagtcttgggagaccaaaaaagaatatccttaggaaatcaaaagctaagggttggttctcttttgagggttagattttagagttgggaaaca 26323290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 35139127 - 35138941
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggttt-ttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    ||||||||||||||||||||||   || || |||||||||||||| ||| ||||| ||||||||||||| |||||| ||||| || |   || | || ||    
T  35139127 tgaatcttggagaaccaaaagaaatgggttcttcggaaagggttgatgccttttgaggagagattcatgaggttggaaaacaaatcaaatgagagtc-tt 35139029  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaat-caaaggctaagggttggttatcttttggggtta 186  Q
    ||||| |||||||  ||||||||| |||||||||| ||||||||||||| ||||  ||| ||||||||||  || |||||||||||||    
T  35139028 tatgagcaacttgaatgagtcttgggagaccaaaatagaagatccttaggaaataaaaaagctaagggttaattctcttttggggtta 35138941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 34 - 204
Target Start/End: Original strand, 20937438 - 20937607
Alignment:
Q  34 ggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatttatgaacaacttgggtgagtcttgtgagaccaaa 133  Q
    ||||| ||||||||| ||||| ||||||||||||| |||||  |||||||| |   |  | || ||| |||  ||||||||||| ||||| |||||||||    
T  20937438 ggaaaaggttggtgccttttgaggagagattcatgtggttgaaaaacacatcaaaagggagtc-tttgtgacaaacttgggtgattcttgggagaccaaa 20937536  T
Q  134 agagaagatccttagaaaatcaaaggctaagggttggttatcttttggggttagaatctagagttgggaaa 204  Q
    ||||||||| ||||| |||||||||| ||| |||||||| |||||||||  |||| |||||||||| ||||    
T  20937537 agagaagattcttaggaaatcaaaggataaaggttggttctcttttgggagtagattctagagttgagaaa 20937607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 28074364 - 28074453
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtgga 91  Q
    |||||||||||||||||||||||| || | || |||||  |||||||| ||||||||| |||||||||||| |||||||||||||||||||    
T  28074364 tgaatcttggagaaccaaaagagggggctcttgggaaatagttggtgcgttttgggga-agattcatggggatgggaaacacatgagtgga 28074453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 120 - 206
Target Start/End: Original strand, 39127413 - 39127499
Alignment:
Q  120 cttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttggggttagaatctagagttgggaaaca 206  Q
    |||| ||||||||||||||| | |||||| ||||||||||||||||||| ||| ||||||| ||||| | ||||||||| |||||||    
T  39127413 cttgagagaccaaaagagaatacccttaggaaatcaaaggctaagggttagttctcttttgtggttaaattctagagtttggaaaca 39127499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 26323931 - 26323850
Alignment:
Q  3 aatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacat 84  Q
    ||||||| |||| ||||||||  || | || ||||||||||||||||||||  | ||||||||||||||||| |||||||||    
T  26323931 aatcttgaagaatcaaaagagagggctattgggaaagggttggtgcattttcagcagagattcatggggttgagaaacacat 26323850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 36796686 - 36796754
Alignment:
Q  143 ccttagaaaatcaaaggctaagggttggttatcttttg-gggttagaatctagagttgggaaacaccttg 211  Q
    |||||| |||||||||||||||||||| ||| |||||| |||||||| || |||||||||||||||||||    
T  36796686 ccttaggaaatcaaaggctaagggttgatta-cttttgagggttagattcaagagttgggaaacaccttg 36796754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 39127346 - 39127389
Alignment:
Q  41 gttggtgcattttggggagagattcatggggttgggaaacacat 84  Q
    |||||||| |||| |||||||||||||| |||||||||||||||    
T  39127346 gttggtgcctttttgggagagattcatgaggttgggaaacacat 39127389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 122
Target Start/End: Original strand, 36796206 - 36796279
Alignment:
Q  49 attttggggagagattcatggggttgggaaacacatgagtggataatcatttatgaacaacttgggtgagtctt 122  Q
    |||||||||||||||||| ||||| |||| ||||| ||||||| | |||||  | | |||||||||||| ||||    
T  36796206 attttggggagagattcacggggtcgggagacacaagagtggagagtcattggttagcaacttgggtgaatctt 36796279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 117; Significance: 9e-60; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 40147008 - 40147215
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaag-ggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | || |||||  ||||||||| ||||||||| |||||||||||||||||||||||||||||||| | || ||    
T  40147008 tgaatcttggagaaccaaaagagggggctcttgggaaaatggttggtgccttttgggga-agattcatggggttgggaaacacatgagtggagagtcttt 40147106  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| ||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| |||||| ||||||||| ||||||||    
T  40147107 tgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagt 40147206  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  40147207 tgggaaaca 40147215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 5057795 - 5058001
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    |||||||| ||||||||||||||| | ||||  | ||| ||||||||| ||||||||| |||||||||||||||| ||||||||||||||| | ||||||    
T  5057795 tgaatctttgagaaccaaaagaggggcttttgggaaaaaggttggtgccttttgggga-agattcatggggttggaaaacacatgagtggagagtcattt 5057893  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagtt 198  Q
     ||| ||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||| |||||||||    
T  5057894 gtgagcaacttgggcgagtcttgtgaaaccaaaagagaagatccttagtaaaatcaaaggctaagggttggttctcttttgggggttagattctagagtt 5057993  T
Q  199 gggaaaca 206  Q
    || |||||    
T  5057994 ggaaaaca 5058001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 38746752 - 38746959
Alignment:
Q  1 tgaatcttggagaaccaaaagaggagg-tttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | ||  | ||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||| | |||||    
T  38746752 tgaatcttggagaaccaaaagagggggctcttaagaaaagggttggtgccttttgggga-agattcatggggttgggaaacacgtgagtggagagtcatt 38746850  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatcctta-gaaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    |  || ||||||||||||||||||||| ||||||||||||||||||||   ||||||||||||||||||||||| |||||| ||||||||| ||||||||    
T  38746851 tgcgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttattgaaatcaaaggctaagggttggttctcttttgggggttagattctagagt 38746950  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  38746951 tgggaaaca 38746959  T

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Target: chr5; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 27015279 - 27015486
Alignment:
Q  1 tgaatcttggagaaccaaaagaggagg-tttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    ||||||||| |||||||||||||| || | ||  | ||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||| | || ||    
T  27015279 tgaatcttgaagaaccaaaagagggggctcttgtgaaaagggttggtgccttttgggga-agaatcatggggttgggaaacacatgagtggagagtcttt 27015377  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| ||||||||||||||||||| | |||||||||||||||||||||  ||||||||||||||||||||||| |||||| ||||||||| ||||||||    
T  27015378 tgtgagcaacttgggtgagtcttgtaaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagt 27015477  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  27015478 tgggaaaca 27015486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 213215 - 213419
Alignment:
Q  1 tgaatcttgg-agaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcat 98  Q
    |||||||||| |||||||||||||| || | || ||||| |||||||||| |||||| || |||||||||||||||||||||||||||||||| | || |    
T  213215 tgaatcttgggagaaccaaaagagggggctcttgggaaaagggttggtgccttttggaga-agattcatggggttgggaaacacatgagtggagagtctt 213313  T
Q  99 ttatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttaga-aaatcaaaggctaagggttggttatcttttgggg-ttagaatctagag 196  Q
    || ||| ||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||     |||||||||| ||||| |||||||    
T  213314 ttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttc----tcttttgggggttagattctagag 213409  T
Q  197 ttgggaaaca 206  Q
    ||||||||||    
T  213410 ttgggaaaca 213419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 28278062 - 28278270
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcgg--aaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcat 98  Q
    |||||||||||||||||||||||| ||  | | ||  ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |  |      
T  28278062 tgaatcttggagaaccaaaagaggggggctcttgggaaaagggttggtgccttttgggga-agattcatggggttgggaaacacatgagtggagagacta 28278160  T
Q  99 ttatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagag 196  Q
    || ||| ||||||||||||||||||||| | |||||||||||||  ||||  |||||||| |||||||||||| | |||||| ||||||||| |||||||    
T  28278161 ttgtgagcaacttgggtgagtcttgtgaaatcaaaagagaagattgttagtgaaatcaaatgctaagggttggctctcttttaggggttagattctagag 28278260  T
Q  197 ttgggaaaca 206  Q
    ||||||||||    
T  28278261 ttgggaaaca 28278270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 27638036 - 27637828
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    ||||||||||||||||||||||||  | | || ||||| |||||||||||||||||| |||  ||||||||||| ||||||||||||||| | | || ||    
T  27638036 tgaatcttggagaaccaaaagagggagctcttgggaaaagggttggtgcattttgggaaga--ttcatggggttaggaaacacatgagtgaagagtcttt 27637939  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaa--gagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctaga 195  Q
    ||||| ||||||||||||||||||||| |||||||  ||||||||||||||  ||||||||| ||||  ||| ||| |||||| |||||||||  |||||    
T  27637938 tatgagcaacttgggtgagtcttgtgaaaccaaaagagagaagatccttagtgaaatcaaagactaaaagtttgttctcttttgggggttagatgctaga 27637839  T
Q  196 gttgggaaaca 206  Q
    |||||||||||    
T  27637838 gttgggaaaca 27637828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 316513 - 316692
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    ||||||||||||||||||||| || || | || ||| ||||||||||| ||||||||||||||||||  ||||||||||||||| |   || | || |||    
T  316513 tgaatcttggagaaccaaaagggggggctcttgggagagggttggtgccttttggggagagattcataaggttgggaaacacatcaaaagagagtc-ttt 316611  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttgggg 183  Q
     ||| |||||| ||||| ||||| ||||||||||||||| |||| ||| ||||||||||||||||||||||| ||||||||||    
T  316612 gtgagcaactt-ggtgaatcttgggagaccaaaagagaaaatcc-taggaaatcaaaggctaagggttggttctcttttgggg 316692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 4160381 - 4160562
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    |||||| |||||||| |||||||| || | || ||| |||||  |||  |||||||||||||||||| |||||||||| ||| | |||||| | ||||||    
T  4160381 tgaatcctggagaactaaaagagggggctcttgggagagggtaagtgtcttttggggagagattcatagggttgggaa-cacgtaagtggagagtcattt 4160479  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttgggg 183  Q
     ||| ||||| |||||| ||||| || |||||||||||||||||||||  ||| |||||||||||||||||| ||||||||||    
T  4160480 gtgagcaactagggtgaatcttgggaaaccaaaagagaagatccttaggtaattaaaggctaagggttggttctcttttgggg 4160562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 14689828 - 14689626
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    ||||| |||||||||||||||| | |||| ||  |||||||||||||| ||||||  |||||||| || |  |||||||||||| |  ||| | | ||||    
T  14689828 tgaattttggagaaccaaaagaaggggttcttgtgaaagggttggtgccttttgg--agagattcgtgagaatgggaaacacataaaaggagagt-attt 14689732  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttggggttagaatctagagttgg 200  Q
     ||| |||||| | | ||||||| || ||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||| |||| ||||||||||     
T  14689731 gtgagcaacttagataagtcttgggacaccaaaagaaaagatccttagaaaatcaaaggctaggggttggttctcttttggggatagattctagagttgt 14689632  T
Q  201 gaaaca 206  Q
    ||||||    
T  14689631 gaaaca 14689626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 33906449 - 33906288
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    ||||||||| |||||||||| ||| || | || ||| ||||||||||| ||||||||||||||||||||||||| ||||||||| |  ||| |  | ||     
T  33906449 tgaatcttgtagaaccaaaaaagggggctcttgggagagggttggtgccttttggggagagattcatggggttgagaaacacatcaaaggagagac-tta 33906351  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaa 163  Q
     ||| |||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||    
T  33906350 gtgagcaacttgggtgagtcttgggaaaccaaaagagaagatccttaggaaatcaaaggctaa 33906288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 102 - 206
Target Start/End: Complemental strand, 16641260 - 16641155
Alignment:
Q  102 tgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttgggg-ttagaatctagagttgg 200  Q
    |||||||||| |||||||||||||| ||||||||||||||| |||| ||||||||||||||| |||||||| |||||||||| ||||| |||||||||||    
T  16641260 tgaacaactttggtgagtcttgtgaaaccaaaagagaagatacttaaaaaatcaaaggctaaaggttggttctcttttggggattagattctagagttgg 16641161  T
Q  201 gaaaca 206  Q
    | ||||    
T  16641160 ggaaca 16641155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 35615919 - 35616122
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    |||||||||||||||||||||||| |  | || |||||||| || ||| |||||||||||||||||||| |||| ||||||||| |  | | | || |||    
T  35615919 tgaatcttggagaaccaaaagaggggactcttgggaaaggggtgatgccttttggggagagattcatggagttgagaaacacataaaagaagagtc-ttt 35616017  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttggggttagaatctagagttgg 200  Q
     | | |||||| ||||||||||| || |||||||| ||||||| | |  |||||||||||| || |||| || ||||||| ||||||| ||||||||| |    
T  35616018 gtaatcaactttggtgagtcttgggaaaccaaaagcgaagatcatcaagaaatcaaaggct-agagttgattctcttttgtggttagattctagagtttg 35616116  T
Q  201 gaaaca 206  Q
    ||||||    
T  35616117 gaaaca 35616122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 30802691 - 30802778
Alignment:
Q  4 atcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtgga 91  Q
    ||||| |||||||||||||||||| | || |||||||||| |||| |||||||||||||||||||||||| | |||||||||||||||    
T  30802691 atcttagagaaccaaaagaggaggctcttgggaaagggtttgtgccttttggggagagattcatggggttagaaaacacatgagtgga 30802778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 10055127 - 10055040
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagt 88  Q
    |||||||||||||||||||||||  || | || ||||||| ||||||| || |||||||||||||| |||||||||||||||||||||    
T  10055127 tgaatcttggagaaccaaaagagagggctcttgggaaaggtttggtgccttatggggagagattcacggggttgggaaacacatgagt 10055040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 16642297 - 16642209
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtgga 91  Q
    ||||||||| ||||||||||||||  | | || ||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  16642297 tgaatcttgaagaaccaaaagagg--gctcttgggaaagggttggtgccttttggggacagattcatggggttaggaaacacatgagtgga 16642209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 21206073 - 21205885
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    |||||||| ||||||||||||| | |||| || ||||||||||||||  ||||  |||||| ||||| |||||||||||||||||||||   | ||||||    
T  21206073 tgaatcttagagaaccaaaagatggggttctttggaaagggttggtgtctttttcggagaggttcatagggttgggaaacacatgagtgaggagtcattt 21205974  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttg-gggttaga 188  Q
     | |  || |||||||| | ||  || || ||||| ||||| |||||  ||||||||| |||||| |||||| ||||||| ||||||||    
T  21205973 gtcagaaatttgggtgaattttaggaaactaaaagtgaagaaccttatgaaatcaaagactaaggattggttctcttttgagggttaga 21205885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 8019464 - 8019537
Alignment:
Q  130 caaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttggggttagaatctagagttgggaaa 204  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| ||| ||||||||| |||| ||||||||||    
T  8019464 caaaagtgaagatccttagaaaatcaaaggctaa-ggttggttatttttgggggttagattctatagttgggaaa 8019537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 30792990 - 30793073
Alignment:
Q  4 atcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagt 88  Q
    ||||||||||||||||| | | || |||  ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  30792990 atcttggagaaccaaaatatgtggctttg-ggaaaaggttggtgccttttggggagatattcatggggttgggaaacacatgagt 30793073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 3e-59; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 4512810 - 4512604
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    |||||||| ||||||||||||||| || | || ||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||| | ||||||    
T  4512810 tgaatcttagagaaccaaaagagggggctcttgggaaagggttggtgccttttgggga-agattcatggggtttggaaacacatgagtggagagtcattt 4512712  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagtt 198  Q
     ||| ||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||| ||| |||||| ||||||| | |||||||||    
T  4512711 gtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttagttctcttttgggggttatattctagagtt 4512612  T
Q  199 gggaaaca 206  Q
    ||||||||    
T  4512611 gggaaaca 4512604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 2390029 - 2390236
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggttttt-cggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    ||||||||||| |||||||||||| || | || || ||||||||||||  ||||||||| |||||||||||||||| ||||||||||||||||| || ||    
T  2390029 tgaatcttggaaaaccaaaagagggggctattgcgaaaagggttggtggcttttgggga-agattcatggggttggaaaacacatgagtggatagtcttt 2390127  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| ||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| |||||| ||||||||| ||||||||    
T  2390128 tgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagt 2390227  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  2390228 tgggaaaca 2390236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 6431718 - 6431925
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcgg-aaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | || || ||||||||||||| ||||||||| |||||||||||||||| ||||||||||||| | | || ||    
T  6431718 tgaatcttggagaaccaaaagagggggctcttggggaaagggttggtgccttttgggga-agattcatggggttggaaaacacatgagtgtagagtcttt 6431816  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatcttttg-gggttagaatctagagt 197  Q
    | ||| ||||||||||||||||||||| |||||||||||||||||||||  |||||||| |||||||||||||| ||||||| |||||||| ||||||||    
T  6431817 tgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaatgctaagggttggttctcttttgagggttagattctagagt 6431916  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  6431917 tgggaaaca 6431925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 36 - 206
Target Start/End: Complemental strand, 2361356 - 2361186
Alignment:
Q  36 aaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatttatgaacaacttgggtgagtcttgtgagaccaaaag 135  Q
    ||||||||||||| |||||||||  ||||||||||||||||||||||||||||||| | || ||| ||| ||||||||||||||||| ||| ||||||||    
T  2361356 aaagggttggtgccttttggggat-gattcatggggttgggaaacacatgagtggagagtcttttgtgagcaacttgggtgagtcttatgaaaccaaaag 2361258  T
Q  136 agaagatccttag-aaaatcaaaggctaagggttggttatcttttggggttagaatctagagttgggaaaca 206  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||    
T  2361257 agaagatccttagtgaaatcaaaggctaagggttggttctcttttgaggttagattctagagttgggaaaca 2361186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 4509117 - 4508920
Alignment:
Q  10 gagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatttatgaacaac 109  Q
    |||||||||||||||  | | || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| | |||||| ||| ||||    
T  4509117 gagaaccaaaagagggagctcttgggaaagggttggtgccttttgggga-agattcatggggttgggaaacacatgagtggagagtcatttgtgagcaac 4509019  T
Q  110 ttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagttgggaaaca 206  Q
    || |||||||||||||| ||||||||| |||||||||||  |||||||||||||||| |||||| ||||||  |||||||| |||||||||||||||||    
T  4509018 tttggtgagtcttgtgaaaccaaaagataagatccttagtgaaatcaaaggctaaggattggttctcttttatgggttagattctagagttgggaaaca 4508920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 4510959 - 4510762
Alignment:
Q  10 gagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatttatgaacaac 109  Q
    |||||||||||||||  | | || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| | |||||| ||| ||||    
T  4510959 gagaaccaaaagagggagctcttgggaaagggttggtgccttttgggga-agattcatggggttgggaaacacatgagtggagagtcatttgtgagcaac 4510861  T
Q  110 ttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagttgggaaaca 206  Q
    || |||||||||||||| |||||||||||||||||||||  |||||||||||||| | |||||| ||||||  |||||||| |||||||||||||||||    
T  4510860 tttggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaacgattggttctcttttatgggttagattctagagttgggaaaca 4510762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 34311137 - 34310932
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | || ||||| |||||||||| ||||||||| || ||||||||| ||| ||||||||||||||| | || ||    
T  34311137 tgaatcttggagaaccaaaagagggggctcttgggaaaagggttggtgccttttgggga-aggttcatggggatggaaaacacatgagtggagagtcttt 34311039  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| ||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||| |||||||| |||||| ||||||||| ||||||||    
T  34311038 tgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaaaggttggttctcttttgggggttagattctagagt 34310939  T
Q  198 tgggaaa 204  Q
    |||||||    
T  34310938 tgggaaa 34310932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 3258743 - 3258948
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    ||||||||||||||| |||||| | || | || ||||| |||||||||| ||||||||| |||||||||||| ||||||||| ||||||||| | || ||    
T  3258743 tgaatcttggagaacaaaaagatggggctcttgggaaaagggttggtgccttttgggga-agattcatggggatgggaaacatatgagtggagagtcttt 3258841  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatc-ttttggggttagaatctagagtt 198  Q
    ||| | ||||||||||||||||||||| ||||||||||||||||||||| ||||||||  ||||||||||||| || ||| ||||||||| |||||||||    
T  3258842 tattagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttaggaaatcaaa-cctaagggttggttctcatttgggggttagattctagagtt 3258940  T
Q  199 gggaaaca 206  Q
    ||||||||    
T  3258941 gggaaaca 3258948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 29608488 - 29608690
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | ||  |||| |||||||||| ||||||      |||||||||||||||||||||||||||||| | || ||    
T  29608488 tgaatcttggagaaccaaaagagggggctcttgtgaaaagggttggtgccttttgg------attcatggggttgggaaacacatgagtggagagtcttt 29608581  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| ||||||||||||||||||||| ||||||| ||||||| |||||  ||||||||||||||||||||||| |||||| ||||||||| ||||||||    
T  29608582 tgtgagcaacttgggtgagtcttgtgaaaccaaaatagaagattcttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagt 29608681  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  29608682 tgggaaaca 29608690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 36 - 206
Target Start/End: Complemental strand, 48599719 - 48599548
Alignment:
Q  36 aaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatttatgaacaacttgggtgagtcttgtgagaccaaaag 135  Q
    ||||||||||||| ||||||||| |||||||||||||||| ||| |||||||| || | || ||| ||| ||||||||||||||||||||| ||||||||    
T  48599719 aaagggttggtgccttttgggga-agattcatggggttggaaaaaacatgagtagagagtcttttgtgagcaacttgggtgagtcttgtgaaaccaaaag 48599621  T
Q  136 agaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagttgggaaaca 206  Q
    |||||||||||||  ||||||||||||||||||||||| |||||| ||||||| | |||||||||||||||||    
T  48599620 agaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttatattctagagttgggaaaca 48599548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 6360333 - 6360126
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggt-tggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | ||  |||| ||  |||||| |||||  || |||||||||| ||||  ||||||||||||||| | |||||    
T  6360333 tgaatcttggagaaccaaaagagggggctcttgagaaaaggaatggtgccttttgaaga-agattcatggagttgaaaaacacatgagtggagagtcatt 6360235  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| ||||||||||||||||||||| | |||||||||||||||||||  ||||||||||||||||||||||| |||||| ||||||||| ||||||||    
T  6360234 tgtgagcaacttgggtgagtcttgtgaaatcaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagt 6360135  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  6360134 tgggaaaca 6360126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 34 - 206
Target Start/End: Complemental strand, 8359705 - 8359531
Alignment:
Q  34 ggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatttatgaacaacttgggtgagtcttgtgagaccaaa 133  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| | || ||| ||| |||||||| |||||||||||| ||||||    
T  8359705 ggaaagggttggtgccttttgggga-agattcatggggttgggaaacacatgagtggagagtcttttgtgagcaacttggatgagtcttgtgaaaccaaa 8359607  T
Q  134 agagaagatccttag-aaaatcaaaggctaagggttggttatcttttgggg--ttagaatctagagttgggaaaca 206  Q
    |||||| ||||||||  ||||||||||||||| ||||||||| ||||||||  ||||| ||| ||||||| |||||    
T  8359606 agagaaaatccttagtgaaatcaaaggctaagagttggttattttttgggggtttagattcttgagttggaaaaca 8359531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 3 - 206
Target Start/End: Complemental strand, 22328818 - 22328612
Alignment:
Q  3 aatcttggagaaccaaaagaggaggtttttcggaaagg-gttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattta 101  Q
    |||||||||||||||||||||| || | || ||||| | |||||||| |||||||||||||||||| ||||||||||| |||||||| || | ||||||     
T  22328818 aatcttggagaaccaaaagagggggctcttaggaaaagagttggtgccttttggggagagattcatagggttgggaaaaacatgagtagagagtcatttg 22328719  T
Q  102 tgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatctttt--ggggttagaatctagagttg 199  Q
    ||| |||||||||||| ||||| || || ||||||||| |||||||   ||||||| |||||||||||||| ||||||  |||||||||  ||| |||||    
T  22328718 tgagcaacttgggtgaatcttgggaaactaaaagagaatatccttatgtaatcaaaagctaagggttggttctcttttggggggttagatcctaaagttg 22328619  T
Q  200 ggaaaca 206  Q
    |||||||    
T  22328618 ggaaaca 22328612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 22269722 - 22269921
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    |||||||||||||||||||||||| || | || |||||| |||||||| ||||||||| ||||||||||||  |||||||||||||||||| | ||  ||    
T  22269722 tgaatcttggagaaccaaaagagg-ggctcttgggaaagagttggtgccttttgggga-agattcatggggaggggaaacacatgagtggagagtctatt 22269819  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagtt 198  Q
      ||  |||||||||||||||||||| ||||||| |||||||||||||  |||||| |||||| ||||||||| |||||| ||||||||| |||||||||    
T  22269820 gagagaaacttgggtgagtcttgtgaaaccaaaatagaagatccttagtgaaatcataggctatgggttggttctcttttgggggttagattctagagtt 22269919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 23794244 - 23794049
Alignment:
Q  11 agaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggg--------gttgggaaacacatgagtggataatcatttat 102  Q
    |||||||||||| |||| |  | ||||||||||||||| |||||||||||||||  |||         |||| |||||||||||| |||| |   ||| |    
T  23794244 agaaccaaaagatgaggatcatgggaaagggttggtgccttttggggagagatttttggtttagaaaagttgagaaacacatgagcggatgagtctttgt 23794145  T
Q  103 gaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttggggttagaatctagagttg 199  Q
    || ||| |||||||| || |  ||||||||||||| ||||||||||||||||||||||||| ||||||||   ||||| ||||||| ||||||||||    
T  23794144 gagcaatttgggtgaatcgtaagagaccaaaagaggagatccttagaaaatcaaaggctaatggttggtt-cattttgtggttagattctagagttg 23794049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 5116382 - 5116551
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    |||||||| ||||||||||||||| || | || ||| ||||| ||||| |||||| ||||||||||| || |||| |||||| | |   ||   ||||||    
T  5116382 tgaatctttgagaaccaaaagagggggctcttgggagagggtcggtgccttttggagagagattcattggattggtaaacacttcaaatgagggtcattt 5116481  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttgg 170  Q
     |||  ||||| ||||||||||| |  |||||||||||||||||| || |||||||||| |||| |||||    
T  5116482 gtgataaacttaggtgagtcttgggtaaccaaaagagaagatcctcaggaaatcaaaggttaagagttgg 5116551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 22552753 - 22552683
Alignment:
Q  102 tgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggtt 172  Q
    ||||| || ||||||| ||||| |||||||||||||||||| | ||| |||||||||| ||||||||||||    
T  22552753 tgaactacatgggtgaatcttgggagaccaaaagagaagattcataggaaatcaaaggataagggttggtt 22552683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 169
Target Start/End: Complemental strand, 43363830 - 43363667
Alignment:
Q  4 atcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatttatg 103  Q
    |||||||||||| ||||||||  | | || ||| |  |||||| | ||||||| ||||||||| ||| ||| ||||||||||||  || | || ||  ||    
T  43363830 atcttggagaactaaaagagggagctcttgggacattgttggttccttttgggaagagattcaaggg-ttgagaaacacatgagatgagagtccttg-tg 43363733  T
Q  104 aacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttg 169  Q
    | ||| |||||||| ||||| ||||||||||||||||||| |||| |||| ||| |||||||||||    
T  43363732 agcaatttgggtgaatcttgagagaccaaaagagaagatctttaggaaattaaatgctaagggttg 43363667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 199
Target Start/End: Complemental strand, 1360470 - 1360375
Alignment:
Q  106 caacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatctttt--ggggttagaatctagagttg 199  Q
    ||||||| ||||||||||  | |||||||||||| ||  || | |||||||||| || || |||||| ||||||  ||||||||| ||||||||||    
T  1360470 caacttgagtgagtcttggaaaaccaaaagagaatatttttgggaaatcaaaggatatggattggttctcttttggggggttagattctagagttg 1360375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 22552858 - 22552791
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatgg 69  Q
    |||||||| ||||||||||||||| || | || ||||| ||||||||| ||||||| | ||||||||||    
T  22552858 tgaatcttagagaaccaaaagagggggctctt-ggaaacggttggtgccttttgggaaaagattcatgg 22552791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 3e-59; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 21593413 - 21593618
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcgg-aaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | || || ||||||||||||| |||||| || |||||||||||||||| ||||||||||||||| | |||||    
T  21593413 tgaatcttggagaaccaaaagagggggctcttggggaaagggttggtgccttttggaga-agattcatggggttggaaaacacatgagtggagagtcatt 21593511  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagtt 198  Q
    | ||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| |||||| ||||||||| |||||||||    
T  21593512 tttgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttaggaaatcaaa-gctaagggttggttctcttttgggggttagattctagagtt 21593610  T
Q  199 gggaaaca 206  Q
    ||||||||    
T  21593611 gggaaaca 21593618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 603501 - 603294
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttc-ggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | ||  ||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||   || ||    
T  603501 tgaatcttggagaaccaaaagagggggctcttgaggaaagggttggtgccttttggaga-agattcatggggttgggaaacacatgagtggagtgtcctt 603403  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| ||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||| |||||||| |||||| ||||||||| ||||||||    
T  603402 tgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaatggttggttctcttttgggggttagattctagagt 603303  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  603302 tgggaaaca 603294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 2973360 - 2973153
Alignment:
Q  1 tgaatcttggagaaccaaaagaggagg-tttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | ||  | ||||||||||||| |||| |||| ||||||||||||||||||||||||||| || | | |||||    
T  2973360 tgaatcttggagaaccaaaagagggggctcttgtgaaaagggttggtgcttttttggga-agattcatggggttgggaaacacatgaatgcagagtcatt 2973262  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| |||||| ||| ||||| ||||||||    
T  2973261 tgtgaacaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttagggattagattctagagt 2973162  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  2973161 tgggaaaca 2973153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 3809130 - 3808923
Alignment:
Q  1 tgaatcttggagaaccaaaagaggagg--tttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcat 98  Q
    |||||||||||||||||||||||| ||  | ||  | ||||||||||| | |||||| || |||||||||||||||||||||||||||||||| | ||||    
T  3809130 tgaatcttggagaaccaaaagaggggggctcttgtgaaaagggttggttccttttggaga-agattcatggggttgggaaacacatgagtggagagtcat 3809032  T
Q  99 ttatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatcttttggggttagaatctagagt 197  Q
    || ||| ||||||||||||||||||| | |||||||||||| ||||||||  ||||||||||||||||||||||| | ||| ||||||||| ||||||||    
T  3809031 ttgtgagcaacttgggtgagtcttgtaaaaccaaaagagaaaatccttagtgaaatcaaaggctaagggttggttctttttgggggttagattctagagt 3808932  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  3808931 tgggaaaca 3808923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 17762734 - 17762943
Alignment:
Q  1 tgaatcttggagaaccaaaagaggagg-tttttcggaaagggttggtgcatttt-ggggagagattcatggggttgggaaacacatgagtggataatcat 98  Q
    |||||||||||||||||||||||| || | ||  | ||||| ||||||| |||| ||||  |||||||||||||||||||||||||||||||| | || |    
T  17762734 tgaatcttggagaaccaaaagagggggctcttgtgaaaaggtttggtgccttttgggggttagattcatggggttgggaaacacatgagtggagagtctt 17762833  T
Q  99 ttatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagag 196  Q
    ||  || ||||||||||||||||||||| || ||||||||||||||||||  ||||||||||||||||||||||| |||||| ||||||||| |||||||    
T  17762834 ttgggagcaacttgggtgagtcttgtgaaacaaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagag 17762933  T
Q  197 ttgggaaaca 206  Q
    ||||||||||    
T  17762934 ttgggaaaca 17762943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 22425248 - 22425042
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggt--ttttcgga-aagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatca 97  Q
    |||||||||||||||||||||||| ||   | || ||| |||||||||||||||||||||| ||||||||||||||| |||||||||| ||| | | |||    
T  22425248 tgaatcttggagaaccaaaagaggggggcctcttgggataagggttggtgcattttgggga-agattcatggggttgtgaaacacatgggtgaagagtca 22425150  T
Q  98 tttatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttggggttagaatctagagt 197  Q
    |||| || |||||| ||| |||||||||| |||||||||||| |||||||| |||||||| |||||||||||||| ||||||||||||||| | ||||||    
T  22425149 tttaagagcaacttcggttagtcttgtgaaaccaaaagagaatatccttaggaaatcaaa-gctaagggttggttctcttttggggttagattatagagt 22425051  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  22425050 tgggaaaca 22425042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 2 - 206
Target Start/End: Original strand, 5043376 - 5043581
Alignment:
Q  2 gaatcttggagaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    ||||||||||||||||||||||  || | || ||||| |||||||||| ||||||| |||  ||||||||||||||||||||||||||||| | || |||    
T  5043376 gaatcttggagaaccaaaagagagggctcttgggaaaagggttggtgccttttgggaaga--ttcatggggttgggaaacacatgagtggagagtctttt 5043473  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagtt 198  Q
     ||| ||| ||||||||||||||||| |||||||||||||||||||||   |||||||||||||| ||||||| |||||| ||||||||| |||||||||    
T  5043474 gtgagcaatttgggtgagtcttgtgaaaccaaaagagaagatccttagtggaatcaaaggctaagagttggttctcttttgggggttagattctagagtt 5043573  T
Q  199 gggaaaca 206  Q
    ||||||||    
T  5043574 gggaaaca 5043581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 26830545 - 26830338
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaag-ggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    ||||||||||||||||||||||||||  | || |||||  ||||||||| |||||| || |||||||||||||||||||||| ||||| | | | |||||    
T  26830545 tgaatcttggagaaccaaaagaggagtctcttgggaaaaaggttggtgccttttggaga-agattcatggggttgggaaacagatgagcgcagagtcatt 26830447  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| ||||||||| ||||||||||| ||||||||||||||| |||||  ||||||||||||||||||||||| |||||| ||||||||| ||||||||    
T  26830446 tgtgagcaacttgggcgagtcttgtgaaaccaaaagagaagattcttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagt 26830347  T
Q  198 tgggaaaca 206  Q
    ||| |||||    
T  26830346 tggaaaaca 26830338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 164
Target Start/End: Original strand, 17757865 - 17757995
Alignment:
Q  36 aaagggttggtgcattttggggag-agattcatggggttgggaaacacatgagtggataatcatttatgaacaacttgggtgagtcttgtgagaccaaaa 134  Q
    ||||||||||||||||||||||   |||||||||||||||||||||||||||||||| | || ||| ||| ||||||||||||||||||||| || ||||    
T  17757865 aaagggttggtgcattttgggggttagattcatggggttgggaaacacatgagtggagagtcttttgtgagcaacttgggtgagtcttgtgaaacaaaaa 17757964  T
Q  135 gagaagatccttag-aaaatcaaaggctaag 164  Q
    ||||||||| | ||  |||||||||||||||    
T  17757965 gagaagatcatcagtgaaatcaaaggctaag 17757995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 110 - 206
Target Start/End: Complemental strand, 5741102 - 5741005
Alignment:
Q  110 ttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatctttt--ggggttagaatctagagttgggaaaca 206  Q
    |||||||| ||||| || || ||||| |||||||||||| |||||||||||||||||||||||| |||||  ||||||||| |||| |||||| |||||    
T  5741102 ttgggtgaatcttgagaaacaaaaagtgaagatccttagtaaatcaaaggctaagggttggtta-cttttggggggttagattctaaagttggaaaaca 5741005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 206
Target Start/End: Original strand, 11660464 - 11660559
Alignment:
Q  110 ttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttggggttagaatctagagttgggaaaca 206  Q
    |||| ||| ||||| ||||||||||||| | | || ||| || ||||||||||||||||||||   ||||||||||||| ||||||||| |||||||    
T  11660464 ttggatgaatcttgggagaccaaaagaggataaccataggaattcaaaggctaagggttggtt-cattttggggttagattctagagttcggaaaca 11660559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 206
Target Start/End: Original strand, 25073457 - 25073521
Alignment:
Q  143 ccttagaaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagttgggaaaca 206  Q
    |||||| |||| ||||||||||||||| || |||||| ||||||||| |||||||||||||||||    
T  25073457 ccttaggaaattaaaggctaagggttgattctcttttgggggttagattctagagttgggaaaca 25073521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 26800525 - 26800607
Alignment:
Q  8 tggagaaccaaaagaggaggtttttcggaaag-ggttggtgcattttggggagagattcatggggttgggaaacacatgagtgga 91  Q
    |||| |||||||||||| || | || |||||  ||||||||| ||||||||| ||||||||||| | ||||||||||||||||||    
T  26800525 tggataaccaaaagagggggctcttgggaaaaaggttggtgccttttgggga-agattcatgggat-gggaaacacatgagtgga 26800607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 3e-59; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 34603323 - 34603529
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    ||||||||||||||||||||||||  | | || ||||| |||||||||| ||||||||| |||||||||||||||| ||||||||||||| | | || ||    
T  34603323 tgaatcttggagaaccaaaagagggagctcttgggaaaagggttggtgccttttgggga-agattcatggggttggaaaacacatgagtgaaaagtcttt 34603421  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttgg-ggttagaatctagagtt 198  Q
    | ||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||| |||||||||    
T  34603422 tgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttaggaaatcaaaggctaagggttggttctcttttggaggttagattctagagtt 34603521  T
Q  199 gggaaaca 206  Q
    ||||||||    
T  34603522 gggaaaca 34603529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 11348445 - 11348652
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggt-tggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | || ||||| ||| |||||| |||||| || |||||||||||||||| ||||||||||||||| | |||||    
T  11348445 tgaatcttggagaaccaaaagagggggctcttgggaaaaggtctggtgccttttggaga-agattcatggggttggaaaacacatgagtggagagtcatt 11348543  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| ||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| |||||| ||||||||| ||||||||    
T  11348544 tgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagt 11348643  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  11348644 tgggaaaca 11348652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 37033494 - 37033287
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | || ||||| |||||||||| ||||| ||| ||||||||| |||||||||||||||||||||| | |||||    
T  37033494 tgaatcttggagaaccaaaagagggggctcttgggaaaagggttggtgccttttgagga-agattcatgaggttgggaaacacatgagtggagagtcatt 37033396  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatc-ttttggggttagaatctagagt 197  Q
    | ||| ||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||| ||||||||| || ||||||||||||| ||||||||    
T  37033395 tgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctatgggttggttctctttttggggttagattctagagt 37033296  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  37033295 tgggaaaca 37033287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 34602760 - 34602557
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    ||||||||||||||||||||||||  | | || | ||| |||||||||| ||||||||| |||||||||||||||| ||||||||||||| | | || ||    
T  34602760 tgaatcttggagaaccaaaagagggagctcttggtaaaagggttggtgccttttgggga-agattcatggggttggaaaacacatgagtgaaaagtcttt 34602662  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttgg-ggttagaatctagagtt 198  Q
    | ||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||| |||||||||    
T  34602661 tgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttaggaaatcaaaggctaagggttggttctcttttggaggttagattctagagtt 34602562  T
Q  199 gggaa 203  Q
    |||||    
T  34602561 gggaa 34602557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 37168044 - 37168251
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | || ||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||| | || ||    
T  37168044 tgaatcttggagaaccaaaagagggggctcttgggaaaagggttggtgccttttgggga-agattcatggggttgggaaacacatgagtggagagtcttt 37168142  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| ||||||||||||||||||||| || ||||||||||||||||||  |||||||||||||| ||||| || |||||| ||||||||| ||||||||    
T  37168143 tgtgagcaacttgggtgagtcttgtgaaactaaaagagaagatccttagtgaaatcaaaggctaaaggttgattctcttttgggggttagattctagagt 37168242  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  37168243 tgggaaaca 37168251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 7482652 - 7482449
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcgg--aaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcat 98  Q
    |||||||||||||||||||||||| ||  | | ||  ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| | || |    
T  7482652 tgaatcttggagaaccaaaagaggggggctcttgggaaaagggttggtgccttttgggga-agattcatggggttgggaaacacatgagtggagagtctt 7482554  T
Q  99 ttatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    || ||| ||||||||||||||||||||| || |||||||||||||||||| |||||||| |||||||||||||| |||||| ||||||||| ||||||||    
T  7482553 ttgtgagcaacttgggtgagtcttgtgaaacaaaaagagaagatccttaggaaatcaaa-gctaagggttggttctcttttgggggttagattctagagt 7482455  T
Q  198 tgggaa 203  Q
    ||||||    
T  7482454 tgggaa 7482449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 47114919 - 47115125
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaa-agggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | || |||| ||||||||| | ||||||| |||  |||||||||||||||||||||||| |||| | || ||    
T  47114919 tgaatcttggagaaccaaaagagggggctcttgggaacagggttggtaccttttgggaaga--ttcatggggttgggaaacacatgaatggagagtcttt 47115016  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatcctt-agaaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| ||||||||||||||||||||| ||||||||||||||||||| |  ||||||||||||||||||||||| |||||| ||||||||| ||||||||    
T  47115017 tgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttaatgaaatcaaaggctaagggttggttctcttttgggggttagattctagagt 47115116  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  47115117 tgggaaaca 47115125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 42298396 - 42298189
Alignment:
Q  1 tgaatcttggagaaccaaaagaggagg-tttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | ||  | ||||||||||||| |||||| || |||||||||||||||||||||||||||||||| | |||||    
T  42298396 tgaatcttggagaaccaaaagagggggctcttgtgaaaagggttggtgccttttggaga-agattcatggggttgggaaacacatgagtggagagtcatt 42298298  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    |  || ||||||||||||||||||||| |||||||||||||||||| ||  ||||||||||||||| ||||||| |||||| ||||||||| ||||||||    
T  42298297 tgcgagcaacttgggtgagtcttgtgaaaccaaaagagaagatcctaagtgaaatcaaaggctaagagttggttctcttttgggggttagattctagagt 42298198  T
Q  198 tgggaaaca 206  Q
    || ||||||    
T  42298197 tgtgaaaca 42298189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 193359 - 193565
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcgg-aaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | || || ||| ||||||||| ||||||| |||  ||||||||||||||||||||||| ||| | | || ||    
T  193359 tgaatcttggagaaccaaaagagggggctcttggggaaaaggttggtgccttttgggaaga--ttcatggggttgggaaacacatgtgtgaagagtcttt 193456  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| |||||||| |||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| |||||| ||||||||| ||||||||    
T  193457 tgtgagcaacttggatgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagt 193556  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  193557 tgggaaaca 193565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 28242136 - 28242342
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | || ||||| |||||||||| ||||||| |||  |||||  |||||||||||||||||||||| | |||||    
T  28242136 tgaatcttggagaaccaaaagagggggctcttgggaaaagggttggtgccttttgggaaga--ttcataaggttgggaaacacatgagtggagagtcatt 28242233  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| ||||||||||||||||||||| |||||||||||| ||||||||  ||||||||||||| ||||||||| |||||| ||||||||| ||||||||    
T  28242234 tgtgagcaacttgggtgagtcttgtgaaaccaaaagagaatatccttagtgaaatcaaaggctatgggttggttctcttttaggggttagattctagagt 28242333  T
Q  198 tgggaaaca 206  Q
    ||| |||||    
T  28242334 tggaaaaca 28242342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 37879332 - 37879125
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaag-ggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    ||||||||||||||| |||||||| || | ||  ||||  ||||||||| ||||||||| | |||||||||||||||||||||||||||||| | || ||    
T  37879332 tgaatcttggagaacaaaaagagggggctcttgtgaaaaaggttggtgccttttggggaaa-attcatggggttgggaaacacatgagtggagagtcttt 37879234  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| ||||||||||||||||||||| | |||||||||||||||||||  |||||||||||||||| |||||| |||||| ||||||||| ||||||||    
T  37879233 tgtgagcaacttgggtgagtcttgtgaaatcaaaagagaagatccttagtgaaatcaaaggctaaggattggttctcttttgggggttagattctagagt 37879134  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  37879133 tgggaaaca 37879125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 29135995 - 29136201
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcgg-aaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| |  | || || ||||||||||||| ||||||||| |||||||||||||| ||||| ||||||||||| | |  ||    
T  29135995 tgaatcttggagaaccaaaagaggggactcttgggaaaagggttggtgccttttgggga-agattcatggggtt-ggaaaaacatgagtggagagttttt 29136092  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| ||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||| ||| |||||| ||||||||| ||||||||    
T  29136093 tgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttagttctcttttgggggttagattctagagt 29136192  T
Q  198 tgggaaaca 206  Q
    || ||||||    
T  29136193 tgtgaaaca 29136201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 36 - 206
Target Start/End: Original strand, 19754274 - 19754448
Alignment:
Q  36 aaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatttatgaacaacttgggtgagtcttgtgagaccaaaag 135  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| | || ||| ||| ||||||||||||||||||||| ||||||||    
T  19754274 aaagggttggtgccttttgggga-agattcatggggttgggaaacacatgagtggagagtcttttgtgagcaacttgggtgagtcttgtgaaaccaaaag 19754372  T
Q  136 agaagatccttaga----aaatcaaaggctaagggttggttatctttt-ggggttagaatctagagttgggaaaca 206  Q
    |||| ||||||| |    |||||||||| ||| |||||||| |||||| ||||||||| |||||||||||||||||    
T  19754373 agaaaatccttataagtgaaatcaaaggataatggttggttctcttttgggggttagattctagagttgggaaaca 19754448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 36 - 200
Target Start/End: Complemental strand, 31926091 - 31925926
Alignment:
Q  36 aaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatttatgaacaacttgggtgagtcttgtgagaccaaaag 135  Q
    ||||||||||||| ||||||||| ||||||||||| ||||||||||| |||||||| |||| ||| ||| ||||||||||||| ||||||| ||||||||    
T  31926091 aaagggttggtgccttttgggga-agattcatgggtttgggaaacacgtgagtggagaatcttttgtgagcaacttgggtgagacttgtgaaaccaaaag 31925993  T
Q  136 agaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagttgg 200  Q
    |||||||||||||  |||||||||||||| |||||||| |||||| ||||||||| |||||||||||    
T  31925992 agaagatccttagtgaaatcaaaggctaatggttggttctcttttgggggttagattctagagttgg 31925926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 206
Target Start/End: Original strand, 41135571 - 41135773
Alignment:
Q  4 atcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatttatg 103  Q
    |||||||||||||||||||||| | |||| ||| ||||||||||| |||| |||||||||||||||||||||||||||||| |  ||| | || ||| ||    
T  41135571 atcttggagaaccaaaagaggaagattttgggagagggttggtgccttttagggagagattcatggggttgggaaacacatcaaaggagagtc-tttgtg 41135669  T
Q  104 aacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagttggga 202  Q
    |  ||||||||||||||||  || |||||||||||||||| || | |||| ||||||||||| |||||| |||||| ||||||||| |||||||||| ||    
T  41135670 agaaacttgggtgagtcttaggaaaccaaaagagaagatcatttggaaattaaaggctaaggattggttctcttttgggggttagattctagagttgaga 41135769  T
Q  203 aaca 206  Q
    ||||    
T  41135770 aaca 41135773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 19752433 - 19752637
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    |||||||||||||||||||||| | || | ||  |||| ||||||||| ||||||||| |||||||| | ||||||||||||||||||||| | |  |||    
T  19752433 tgaatcttggagaaccaaaagatggggctcttatgaaaaggttggtgccttttgggga-agattcattgagttgggaaacacatgagtggagagtatttt 19752531  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagtt 198  Q
     ||| |||||| | |||||||||||| |||||||||||||||||||||  |||||||||||||| | |||||| |||||| ||||||||| |||||||||    
T  19752532 gtgagcaacttagatgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaatgattggttctcttttgggggttagattctagagtt 19752631  T
Q  199 gggaaa 204  Q
    ||||||    
T  19752632 gggaaa 19752637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 13547510 - 13547303
Alignment:
Q  1 tgaatcttggagaaccaaaagagg-aggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    ||||||||||| |||||||||||| || | ||  | ||||||| ||||| ||||| ||| | |||||||||||||| ||||||||||||||| | || ||    
T  13547510 tgaatcttggataaccaaaagagggagctcttgtgaaaagggtcggtgccttttgaggaaa-attcatggggttggaaaacacatgagtggagagtcttt 13547412  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| |||||||||||| |||||||| ||||||||||||||| |||||  ||||||||||||||||||||||| |||||| ||||||||| |||||| |    
T  13547411 tgtgagcaacttgggtgaatcttgtgaaaccaaaagagaagatacttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagatt 13547312  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  13547311 tgggaaaca 13547303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 13549421 - 13549214
Alignment:
Q  1 tgaatcttggagaaccaaaagagg-aggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    ||||||||||| |||||||||||| || | ||  | ||||||| ||||| ||||| ||| | |||||||||||||| ||||||||||||||| | || ||    
T  13549421 tgaatcttggataaccaaaagagggagctcttgtgaaaagggtcggtgccttttgaggaaa-attcatggggttggaaaacacatgagtggagagtcttt 13549323  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| |||||||||||| |||||||| ||||||||||||||| |||||  ||||||||||||||||||||||| |||||| ||||||||| |||||| |    
T  13549322 tgtgagcaacttgggtgaatcttgtgaaaccaaaagagaagatacttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagatt 13549223  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  13549222 tgggaaaca 13549214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 47255755 - 47255556
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    |||||||||||||||||||||| | || | || |||||    |||||| ||||||||| ||||||||||| ||||||||||||||| |||| | || |||    
T  47255755 tgaatcttggagaaccaaaagatggggctcttgggaaaa---tggtgccttttgggga-agattcatggg-ttgggaaacacatgattggagagtctttt 47255661  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagtt 198  Q
     ||| |||||| | |||||||||||| |||||||||||||||||||||  ||||||||| ||||||||||||| |||||| ||||||||| |||||||||    
T  47255660 gtgagcaacttag-tgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaagactaagggttggttctcttttgggggttagattctagagtt 47255562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 3331428 - 3331509
Alignment:
Q  128 accaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttggggttagaatctagagttgggaaacacctt 210  Q
    |||||||||| |||||||||| ||||||||||||||||||| ||| |||||||||||| || |||||||||||||||||||||    
T  3331428 accaaaagaggagatccttaggaaatcaaaggctaagggtttgtt-tcttttggggttggattctagagttgggaaacacctt 3331509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 38 - 184
Target Start/End: Complemental strand, 12318864 - 12318719
Alignment:
Q  38 agggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatttatgaacaacttgggtgagtcttgtgagaccaaaagag 137  Q
    ||||||||||| |||||||||||  ||||| || ||| ||||||||| |  ||| | |  ||||||| |||||||||||||||||| |||||||||| ||    
T  12318864 agggttggtgccttttggggagaagttcataggattgagaaacacatcaaaggagagtt-tttatgagcaacttgggtgagtcttgggagaccaaaatag 12318766  T
Q  138 aagatccttagaaaatcaaaggctaagggttggttatcttttggggt 184  Q
    || ||| || | ||||||||||||||||||||||| ||||| |||||    
T  12318765 aaaatcttttggaaatcaaaggctaagggttggttctctttgggggt 12318719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 206
Target Start/End: Complemental strand, 16216911 - 16216712
Alignment:
Q  4 atcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatttatg 103  Q
    |||||| |||||||||||||| || | |||| ||||||||||||||||||||  ||| ||||||| | |||| ||||||||||| ||| | |||||  ||    
T  16216911 atcttgaagaaccaaaagagggggctcttcgaaaagggttggtgcattttggatagaaattcatgtg-ttggcaaacacatgagaggagagtcattg-tg 16216814  T
Q  104 aacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttggggttagaatctagagttgggaa 203  Q
    | ||||||| |||| | |||  |    |||||||||||||||||| ||||||||||||| | ||||||| |  ||| |||||||| |||||||||| |||    
T  16216813 agcaacttgagtgaattttgaaaacttaaaagagaagatccttaggaaatcaaaggctacgagttggtt-tagtttagggttagattctagagttgagaa 16216715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 36 - 207
Target Start/End: Complemental strand, 4535860 - 4535683
Alignment:
Q  36 aaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatttatgaacaacttgg-------gtgagtcttgtgaga 128  Q
    ||||||||||||  ||||||| | |||||||||||||||  ||||||||||||||||| || ||| ||| ||||||||       ||||   |||  | |    
T  4535860 aaagggttggtgtcttttgggaatagattcatggggttgaaaaacacatgagtggatagtcgtttgtgagcaacttggcacttgggtgaaatttggtaaa 4535761  T
Q  129 ccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttggggttagaatctagagttgggaaacac 207  Q
    | ||||| |||||||||||| |||||||||||||| ||||||||| |||| ||||||||| || | |||||||||||||    
T  4535760 ctaaaagtgaagatccttaggaaatcaaaggctaaaggttggtta-ctttcggggttagattcaatagttgggaaacac 4535683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 50 - 206
Target Start/End: Original strand, 6808243 - 6808399
Alignment:
Q  50 ttttggggagagattcatggggttgggaaacacatgagtggataatcatttatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttaga 149  Q
    ||||||| |||||||||||||||||| |||||||||| || | | |||||| ||| ||||| ||||||||  ||  | |||||||||||||||| |||      
T  6808243 ttttgggaagagattcatggggttggaaaacacatgaatgaagagtcatttgtgagcaactagggtgagtaatggaaaaccaaaagagaagatcattatg 6808342  T
Q  150 aaatcaaaggctaagggttggttatcttttggggttagaatctagagttgggaaaca 206  Q
     |||||||| |  | |||||||| ||||| | ||||||| |||||||||| ||||||    
T  6808343 taatcaaagacggaaggttggttctctttcgaggttagattctagagttgagaaaca 6808399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 28318180 - 28318110
Alignment:
Q  1 tgaatcttggagaaccaaaagag-gaggtttttcggaaagggttggtgcattttggggagagattcatggg 70  Q
    ||||| ||||| ||||||||||| | |||| || |||||||||| ||||||||||||||||||||||||||    
T  28318180 tgaattttggataaccaaaagagaggggttcttgggaaagggttagtgcattttggggagagattcatggg 28318110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 172
Target Start/End: Original strand, 6068447 - 6068511
Alignment:
Q  108 acttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggtt 172  Q
    |||||| ||| ||||| |||| | ||||||||||||||||| ||||||||||||||| |||||||    
T  6068447 acttggttgaatcttgagagatcgaaagagaagatccttaggaaatcaaaggctaagagttggtt 6068511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 9109822 - 9109653
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    |||||||||||||||||||| ||| |  |  | ||| ||||||| ||  ||||||||||||||||||| |||||||| |||||| |   || | || |||    
T  9109822 tgaatcttggagaaccaaaaaaggggactcatgggagagggttgatgtcttttggggagagattcatgaggttgggagacacatcaaatgagagtctttt 9109723  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttgg 170  Q
     ||| ||| |||| ||||||||| || | ||||| |||||||| | ||  |||||||| |||| ||||||    
T  9109722 gtgagcaatttggatgagtcttgggaaatcaaaatagaagatcatgaggtaatcaaagactaatggttgg 9109653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 206
Target Start/End: Original strand, 22079174 - 22079274
Alignment:
Q  106 caacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagttgggaaa 204  Q
    |||||| |||||||||||  | ||||||| | ||||| ||||  |||||||||||||||| || ||| |||||| ||||||||| |||||||||| ||||    
T  22079174 caacttaggtgagtcttggcaaaccaaaatataagatgcttatgaaatcaaaggctaaggatt-gttctcttttgggggttagattctagagttgagaaa 22079272  T
Q  205 ca 206  Q
    ||    
T  22079273 ca 22079274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 27558634 - 27558471
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    ||||| || ||||||||||||| |||||| ||  |||||||||||||| ||   |||||||||| ||  | |||||| ||||||||  || | |  ||||    
T  27558634 tgaatatttgagaaccaaaagaagaggttcttgtgaaagggttggtgccttcacgggagagatttataag-ttgggacacacatgataggttgagtattt 27558536  T
Q  101 -atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaag 164  Q
     |||| |||| ||||||| |||||  | || |||||| |||||||||||||||||||||| ||||    
T  27558535 tatgagcaacctgggtgaatcttggaacactaaaagataagatccttagaaaatcaaaggttaag 27558471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 6068376 - 6068447
Alignment:
Q  12 gaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacaca 83  Q
    ||||||||||||| || | || ||||| ||||||||  ||||||| ||||||||||  ||||||||||||||    
T  6068376 gaaccaaaagagggggctcttaggaaaaggttggtgtcttttgggaagagattcataaggttgggaaacaca 6068447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 157
Target Start/End: Original strand, 25651937 - 25651988
Alignment:
Q  106 caacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaa 157  Q
    |||||||||||| ||||| || | |||||| |||||||||||||||||||||    
T  25651937 caacttgggtgaatcttgggaaagcaaaagtgaagatccttagaaaatcaaa 25651988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 38747102 - 38747052
Alignment:
Q  36 aaagggttggtgcattttggggagagattcatggggttgggaaacacatga 86  Q
    ||||||||||||| |||||| ||||| ||||| ||||||| ||||||||||    
T  38747102 aaagggttggtgccttttggagagaggttcatagggttggaaaacacatga 38747052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 41053158 - 41053245
Alignment:
Q  114 gtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttggggttagaatctagagttggga 202  Q
    |||| ||||| ||||||||||||| | | |  ||| ||||||||||| || ||||||||  ||||| |||||||| |||||||||||||    
T  41053158 gtgaatcttgggagaccaaaagaggaaacctgtaggaaatcaaaggccaatggttggttc-cttttagggttagattctagagttggga 41053245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 2e-57; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 6655703 - 6655910
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcgg-aaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | || || ||||||||||||| |||||| || |||||||||||||||||||||||||||||||| | |||||    
T  6655703 tgaatcttggagaaccaaaagagggggctcttggggaaagggttggtgccttttggaga-agattcatggggttgggaaacacatgagtggagagtcatt 6655801  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatc-ttttggggttagaatctagagt 197  Q
    | ||| ||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||| ||||| || || ||||||||||||| ||||||||    
T  6655802 tctgagcaacttgggtgagtcttgtgaaaccaaaagagaagatcattagtaaaatcaaaggctaaaggttgtttctctttttggggttagattctagagt 6655901  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  6655902 tgggaaaca 6655910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 379126 - 379332
Alignment:
Q  1 tgaatcttggagaaccaaaagaggagg-tttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | ||  | ||||||| ||||| ||||||||| ||||||||| |  ||||||||||||||||||| | |||||    
T  379126 tgaatcttggagaaccaaaagagggggctcttgtgaaaagggtcggtgccttttgggga-agattcatgagaatgggaaacacatgagtggagagtcatt 379224  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttg-gggttagaatctagagtt 198  Q
    | ||| ||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| |||||||||    
T  379225 tgtgagcaacttgggtgagtcttgtgaaatcaaaagagaagatccttaggaaatcaaaggctaagggttggttctcttttgtgggttagattctagagtt 379324  T
Q  199 gggaaaca 206  Q
    ||||||||    
T  379325 gggaaaca 379332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 35662189 - 35662394
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | || ||||| |||||||||| ||||||||| |||||||||||||||| |||||||||| |||| | |  ||    
T  35662189 tgaatcttggagaaccaaaagagggggctcttaggaaaagggttggtgccttttgggga-agattcatggggttggaaaacacatgaatggagagttctt 35662287  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttggg-gttagaatctagagtt 198  Q
    | ||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| ||||||||| |||||| |||||||||    
T  35662288 tgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttaggaaatcaaa-gctaagggttggttctcttttgggtgttagattctagagtt 35662386  T
Q  199 gggaaaca 206  Q
    ||||||||    
T  35662387 gggaaaca 35662394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 3 - 206
Target Start/End: Complemental strand, 55085784 - 55085579
Alignment:
Q  3 aatcttggagaaccaaaagaggaggtttttcgg-aaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattta 101  Q
    |||||||||||||||||||||| || | || || ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| | ||||||     
T  55085784 aatcttggagaaccaaaagagggggctcttggggaaagggttggtgccttttgggga-agattcatggggttgggaaacacatgagtggagagtcatttg 55085686  T
Q  102 tgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttat-cttttggggttagaatctagagttg 199  Q
    ||| ||||||| ||||||||||||| |||||||||||||||||||||  |||||||||||||||||||| || | |||| ||||||||| |||||||||     
T  55085685 tgagcaacttgtgtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcctttgggggttagattctagagttc 55085586  T
Q  200 ggaaaca 206  Q
    |||||||    
T  55085585 ggaaaca 55085579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 41964164 - 41964368
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | || ||||| ||||| ||    ||| |||| ||||||||||||||||||||||||||||| || | || ||    
T  41964164 tgaatcttggagaaccaaaagagggggctcttgggaaaagggttagtc---ttttgggaaagattcatggggttgggaaacacatgagtagagagtcttt 41964260  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatcttttggggttagaatctagagtt 198  Q
    | ||| ||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  41964261 tgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttggggttagattctagagtt 41964360  T
Q  199 gggaaaca 206  Q
    ||||||||    
T  41964361 gggaaaca 41964368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 26364012 - 26364219
Alignment:
Q  1 tgaatcttggagaaccaaaagaggagg-tttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | ||  | |||||||||| || |||||| || |||||||||||||||||||||||||||||||| | |||||    
T  26364012 tgaatcttggagaaccaaaagagggggctcttgtgaaaagggttggggccttttggaga-agattcatggggttgggaaacacatgagtggagagtcatt 26364110  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatcttttgg-ggttagaatctagagt 197  Q
    | ||| ||||||||||||||||||||| |||||||||||||||||||||  |||||||| |||||||||||||| |||||||| ||||||| | ||||||    
T  26364111 tgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaatgctaagggttggttctcttttggtggttagattttagagt 26364210  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  26364211 tgggaaaca 26364219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 33989610 - 33989815
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    ||||||||| |||||||||| ||| || | || ||| | ||||||||| ||||||| ||||||||||||| |||||||||||||||||||| | ||||||    
T  33989610 tgaatcttgaagaaccaaaatagggggctcttgggagaaggttggtgccttttggg-agagattcatgggattgggaaacacatgagtggagagtcattt 33989708  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttgg-ggttagaatctagagttg 199  Q
     ||| ||||||||||||||||| ||| |||||||||||||||||||||  ||||||||||||||| || ||| |||||||| ||||||| ||||||||||    
T  33989709 gtgagcaacttgggtgagtcttttgaaaccaaaagagaagatccttaggtaatcaaaggctaaggatttgttctcttttggaggttagattctagagttg 33989808  T
Q  200 ggaaaca 206  Q
    |||||||    
T  33989809 ggaaaca 33989815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 8665154 - 8665361
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | || ||||| |||||||||| ||||||||| |||||||||||||||||||||||| ||||||| | || ||    
T  8665154 tgaatcttggagaaccaaaagagggggctcttgggaaaagggttggtgccttttgggga-agattcatggggttgggaaacacaggagtggagagtcttt 8665252  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| ||||||||||||||||||||| |||||||||||||||||||||  |||||||||| || | ||||||| |||||| ||||||||| ||| ||||    
T  8665253 tgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggttatgtgttggttttcttttgggggttagattctggagt 8665352  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  8665353 tgggaaaca 8665361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 50674267 - 50674060
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | |   |||| |||||||||| || |||| | |||||||||||||||||||||||||||||||| | || ||    
T  50674267 tgaatcttggagaaccaaaagagggggctctaatgaaaagggttggtgccttatgggaa-agattcatggggttgggaaacacatgagtggagagtcttt 50674169  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| ||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| |||||| ||||||||| ||||||||    
T  50674168 tgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagt 50674069  T
Q  198 tgggaaaca 206  Q
    ||| |||||    
T  50674068 tggaaaaca 50674060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 54882767 - 54882974
Alignment:
Q  1 tgaatcttggagaaccaaaagaggagg-tttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | ||  | ||||||||||||| |||||| || |||||||||||||||||||||||||||||| | | || ||    
T  54882767 tgaatcttggagaaccaaaagagggggctcttatgaaaagggttggtgccttttggaga-agattcatggggttgggaaacacatgagtgtagagtcttt 54882865  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | |||  ||||||||||||||| |||| |||||||||||||||||||||  ||||||||||||||||||||||| |||||| ||||||||| ||||||||    
T  54882866 tgtgagaaacttgggtgagtctcgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagt 54882965  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  54882966 tgggaaaca 54882974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 50263119 - 50262912
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcg-gaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | || |  ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| | || ||    
T  50263119 tgaatcttggagaaccaaaagagggggctcttggaaaaagggttggtgccttttgggga-agattcatggggttgggaaacacatgagtggagagtcttt 50263021  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| |||| | ||||| |||||||| |||||||||||||| ||||||  |||||||||||||| |||||||| |||||| ||||||||| ||||||||    
T  50263020 tgtgagcaacctcggtgactcttgtgaaaccaaaagagaagacccttagtgaaatcaaaggctaatggttggttctcttttgggggttagattctagagt 50262921  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  50262920 tgggaaaca 50262912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 206
Target Start/End: Original strand, 12073142 - 12073346
Alignment:
Q  3 aatcttggagaaccaaaagaggaggtttttcgg--aaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    |||||||||||||||||||||| || | || ||  ||||||||||||| |||||||   |||||||||||||||| ||||||||||||| | | || |||    
T  12073142 aatcttggagaaccaaaagagg-ggctcttgggaaaaagggttggtgccttttggg--aagattcatggggttggaaaacacatgagtgaagagtctttt 12073238  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagtt 198  Q
     ||| ||||||||||||||||| ||| |||||||||||||||||||||  |||||||| |||||||||||||| |||||| ||||||||| |||||||||    
T  12073239 gtgagcaacttgggtgagtcttatgaaaccaaaagagaagatccttagtgaaatcaaatgctaagggttggttctcttttgggggttagattctagagtt 12073338  T
Q  199 gggaaaca 206  Q
    ||||||||    
T  12073339 gggaaaca 12073346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 8647885 - 8648092
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | || ||||| |||||||||| ||||||||| |||||||||||||||||||||||| ||||||| | || ||    
T  8647885 tgaatcttggagaaccaaaagagggggctcttgggaaaagggttggtgccttttgggga-agattcatggggttgggaaacacaggagtggagagtcttt 8647983  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| ||||||||||||||||||||| | |||||||||||||||||||  |||||||| | || | ||||||| |||||| ||||||||| ||| ||||    
T  8647984 tgtgagcaacttgggtgagtcttgtgaaatcaaaagagaagatccttagtgaaatcaaatgttatgtgttggttctcttttgggggttagattctggagt 8648083  T
Q  198 tgggaaaca 206  Q
    | |||||||    
T  8648084 taggaaaca 8648092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 40630731 - 40630878
Alignment:
Q  1 tgaatcttggagaaccaaaagagg-aggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || ||||  | ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| | || ||    
T  40630731 tgaatcttggagaaccaaaagagggagcttttgtgaaaagggttggtgccttttgggga-agattcatggggttgggaaacacatgagtggagagtcttt 40630829  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag 148  Q
    | ||| ||||||||||||||||||||| |||||||||||||||||||||    
T  40630830 tgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttag 40630878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 33089646 - 33089846
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    |||||||||||||| ||||||||| || | || ||| ||||||||||  |||||| |||||||||||||||| |  ||||||||||||||| | ||||||    
T  33089646 tgaatcttggagaatcaaaagagggggctcttgggagagggttggtgtcttttggagagagattcatggggtcgaaaaacacatgagtggagagtcattt 33089745  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttgg-ggttagaatctagagttg 199  Q
     ||| |||||||||           |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||| | ||||||||    
T  33089746 gtgagcaacttggg-----------agaccaaaagagaagatccttagaaaatcaaaggctaaaggttggttctcttttggaggttagattatagagttg 33089834  T
Q  200 ggaaacaccttg 211  Q
    ||||||||||||    
T  33089835 ggaaacaccttg 33089846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 46703248 - 46703453
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||| ||||| ||||||||| || | || ||||| |||||||||| ||||||||| |||||||||||| ||||||| |||||| |||| | || ||    
T  46703248 tgaatcttcgagaatcaaaagagggggctcttgggaaaagggttggtgccttttgggga-agattcatggggatgggaaa-acatgaatggagagtcttt 46703345  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagtt 198  Q
    | | | ||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||  ||||||| |||||| ||||||||| | ||| |||    
T  46703346 tgtcagcaacttgggtgagtcttgtgaaaccaaaagagaaaatccttaggaaatcaaaggctaaaagttggttctcttttgggggttagattatagtgtt 46703445  T
Q  199 gggaaaca 206  Q
    ||||||||    
T  46703446 gggaaaca 46703453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 206
Target Start/End: Original strand, 12119320 - 12119491
Alignment:
Q  34 ggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatttatgaacaacttgggtgagtcttgtgagaccaaa 133  Q
    ||||||||||||| |  ||| |||| ||||||||||||||| ||||||||| |||||  |||||||| ||| ||| ||||||| ||||||||| ||||||    
T  12119320 ggaaagggttggttcccttttggga-agattcatggggttgcgaaacacattagtggtgaatcatttgtgagcaatttgggtgtgtcttgtgaaaccaaa 12119418  T
Q  134 agagaagatccttagaaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagttgggaaaca 206  Q
    ||||||||||||||  ||||| || | |||||||||||| |||||| ||||||||| | |||||||||||||||    
T  12119419 agagaagatccttaagaaatcgaa-gttaagggttggttctcttttgggggttagattatagagttgggaaaca 12119491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 34112359 - 34112539
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    ||||||||||| |||| ||||| |||| | || | ||||||||||||| |||||||||||| |||| |||||||| ||||||||||||||| | |||| |    
T  34112359 tgaatcttggataacctaaagacgaggctcttagaaaagggttggtgccttttggggagaggttcacggggttggaaaacacatgagtggagagtcatct 34112458  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttgg 181  Q
     ||| |||||||| ||| |||||  | | |||||  |||||||||||| |||||||||||||| | |||||| ||||||||    
T  34112459 gtgagcaacttggatgaatcttggaaaaacaaaactgaagatccttaggaaatcaaaggctaaagtttggttctcttttgg 34112539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 3785838 - 3786034
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    ||||||||| |||||||||||||| || | || | ||||||||||||| ||||| ||||||| | ||||||| | | ||||| | |  ||| | || |||    
T  3785838 tgaatcttgaagaaccaaaagagggggctcttggaaaagggttggtgccttttgaggagagaattatggggtcgaggaacacttcaaaggagagtc-ttt 3785936  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttggggttagaatctagagtt 198  Q
     ||| ||| ||| | |||||||| ||||||||||||||| |||||||| ||||||||||||||| ||||||| |||||||||| |||| |||||||||    
T  3785937 gtgagcaaattgtgcgagtcttgggagaccaaaagagaatatccttaggaaatcaaaggctaagagttggttctcttttgggggtagattctagagtt 3786034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 107 - 206
Target Start/End: Original strand, 41961264 - 41961364
Alignment:
Q  107 aacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttg-gggttagaatctagagttgggaaac 205  Q
    ||||||||||||||||| |||||||||| |||| |||||||| |||||||| |||||||||||||| ||||||| |||||||| ||||||||||||||||    
T  41961264 aacttgggtgagtcttgggagaccaaaaaagaatatccttaggaaatcaaaagctaagggttggttctcttttgagggttagattctagagttgggaaac 41961363  T
Q  206 a 206  Q
    |    
T  41961364 a 41961364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 27417372 - 27417199
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaaggg-ttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||| | || | || |||||||| ||||||  ||||||||| |||||||||||||||||||||||||||||||| | || ||    
T  27417372 tgaatcttggagaaccaaaagaaggggctcttgggaaaggggttggtgtcttttgggga-agattcatggggttgggaaacacatgagtggagagtcttt 27417274  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatcttttgggg 183  Q
              ||||||||||||||| | ||||||| |||||||||||||  ||||||||| ||||||||||||| ||||||||||    
T  27417273 ----------ttgggtgagtcttgtaaaaccaaaaaagaagatccttagtgaaatcaaagactaagggttggttctcttttgggg 27417199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 22883173 - 22882967
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    ||||||||||||||| |||||||| || | || ||| |||| || | | |||||| |||||| |||| ||||| |||||||||| |   || | || |||    
T  22883173 tgaatcttggagaacaaaaagagggggctcttgggagagggctgataccttttggagagagactcatagggttaggaaacacatcaaatgagagtc-ttt 22883075  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatctttt--ggggttagaatctagagtt 198  Q
     ||| ||| ||||| |||||||  ||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||  ||||||||| |||||| ||    
T  22883074 gtgagcaatttgggcgagtcttaggagaccaaaagagaagatccttagaaaatcaaaggataatggttggttctcttttggggggttagattctagaatt 22882975  T
Q  199 gggaaaca 206  Q
    || |||||    
T  22882974 ggaaaaca 22882967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 22934837 - 22934631
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    ||||||||||||||| |||||||| || | || ||| |||| || | | |||||| |||||| |||| ||||| |||||||||| |   || | || |||    
T  22934837 tgaatcttggagaacaaaaagagggggctcttgggagagggctgataccttttggagagagactcatagggttaggaaacacatcaaatgagagtc-ttt 22934739  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatctttt--ggggttagaatctagagtt 198  Q
     ||| ||| ||||| |||||||  ||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||  ||||||||| |||||| ||    
T  22934738 gtgagcaatttgggcgagtcttaggagaccaaaagagaagatccttagaaaatcaaaggataatggttggttctcttttggggggttagattctagaatt 22934639  T
Q  199 gggaaaca 206  Q
    || |||||    
T  22934638 ggaaaaca 22934631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 46569967 - 46569821
Alignment:
Q  1 tgaatcttggagaaccaaaagaggagg-tttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | ||  | ||||| ||||||| |||| |||| |||||||||||||||||||||| ||||||||| | || ||    
T  46569967 tgaatcttggagaaccaaaagagggggctcttgtgaaaaggattggtgcctttt-gggaaagattcatggggttgggaaacaaatgagtggaaagtcttt 46569869  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatcctta 147  Q
    | |||||||||| ||||| |||| ||| ||||||||||||| ||||||    
T  46569868 tgtgaacaacttaggtgaatcttatgaaaccaaaagagaaggtcctta 46569821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 35370758 - 35370548
Alignment:
Q  1 tgaatcttggagaacc-aaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||| |||||||| |||| || ||| ||||||||| | |||| |  ||||||||||| |||||  ||| |||| |  ||| | || ||    
T  35370758 tgaatcttggagaacctaaaagagggggttcttgggagagggttggtcccttttcgaaagagattcatgaggttgataaaaacatcaaaggagagtc-tt 35370660  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttggggttagaatctagagttg 199  Q
    | | | ||||||||||||||||   || ||||||| |||||||| || | |||||||||||||| |||||||| |||||||| |||||| | |||| |||    
T  35370659 tgtaagcaacttgggtgagtctatggataccaaaatagaagatctttgggaaatcaaaggctaatggttggttctcttttggagttagattatagaattg 35370560  T
Q  200 ggaaacaccttg 211  Q
    ||||||||||||    
T  35370559 ggaaacaccttg 35370548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 116 - 204
Target Start/End: Original strand, 2209575 - 2209665
Alignment:
Q  116 gagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagttgggaaa 204  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||||| ||||||||| |||||| ||||||||| |||||||||||||||    
T  2209575 gagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctatgggttggttctcttttgggggttagattctagagttgggaaa 2209665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 102 - 206
Target Start/End: Original strand, 32091327 - 32091431
Alignment:
Q  102 tgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttggggttagaatctagagttggg 201  Q
    |||||||||||||| ||| ||| ||||||| | |||||||||||||| ||||||||||| ||| ||||||| | ||||||||| ||| |||| |||| ||    
T  32091327 tgaacaacttgggtaagttttgggagaccagaggagaagatccttaggaaatcaaaggcaaagtgttggttcttttttggggtaagattctaaagtttgg 32091426  T
Q  202 aaaca 206  Q
    |||||    
T  32091427 aaaca 32091431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 2209455 - 2209545
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcgg-aaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtgga 91  Q
    ||||||||||||||||||| |||| |  | || || ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  2209455 tgaatcttggagaaccaaacgaggggactcttgggaaaagggttggtgccttttgggga-agattcatggggttgggaaacacatgagtgga 2209545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 22629309 - 22629147
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    |||||||||||||||||||| |||||  | ||   ||| |||| |||| ||||||| ||| ||| ||||||||| |||||||||||| ||| | | || |    
T  22629309 tgaatcttggagaaccaaaataggagaatattgaaaaatggttagtgccttttgggaagatatttatggggttgagaaacacatgagaggagagt-atct 22629211  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaag 164  Q
     ||| ||| ||| |||| ||||| |||||||| | | |||||||||||||||||||||||||||    
T  22629210 ctgagcaatttgagtgaatcttgggagaccaacataaaagatccttagaaaatcaaaggctaag 22629147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 35369860 - 35369656
Alignment:
Q  1 tgaatcttggagaacc-aaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||| |||||||| |||| || ||| ||||||||| | |||| |  ||||||||||| ||||  ||||||||| |   |||| || ||    
T  35369860 tgaatcttggagaacctaaaagagggggttcttgggagagggttggtcccttttcgaaagagattcatgaggtttagaaacacatcaaaagatagtc-tt 35369762  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttggggttagaatctagagttg 199  Q
    | | | ||||||||||||||||   || | ||||| |||||||| || | || |||||||||||||||||||| |||||||||||| || | |||| |||    
T  35369761 tgtaagcaacttgggtgagtctatggatagcaaaatagaagatctttgggaa-tcaaaggctaagggttggttctcttttggggttggattatagaattg 35369663  T
Q  200 ggaaaca 206  Q
    |||||||    
T  35369662 ggaaaca 35369656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 206
Target Start/End: Complemental strand, 26699831 - 26699660
Alignment:
Q  36 aaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatttatgaacaacttgggtgagtcttgtgagaccaaaag 135  Q
    ||||||||||||| ||||  | ||||||||||||||| |||| | ||||||||||| | |||||  |||||||||  | ||||||||   | || |||||    
T  26699831 aaagggttggtgccttttcagaagagattcatggggtcgggagatacatgagtggagattcattagtgaacaactcagatgagtcttagaaaactaaaag 26699732  T
Q  136 agaagatccttagaaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagttgggaaaca 206  Q
    ||| |||| |||   ||||||||| ||| |||||||| |||||| ||||||||| | || ||||||||||||    
T  26699731 agatgatctttatgtaatcaaaggttaaaggttggttctcttttaggggttagattataaagttgggaaaca 26699660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 38811499 - 38811410
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtgga 91  Q
    |||||||||||||||| ||||||| || | || ||||||||||||||  ||||| ||||||||||||| |||| |||||||||| ||||||    
T  38811499 tgaatcttggagaacccaaagagg-ggctcttgggaaagggttggtgtcttttgcggagagattcatgaggttaggaaacacataagtgga 38811410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 211
Target Start/End: Complemental strand, 6200235 - 6200073
Alignment:
Q  50 ttttggggagagattcatggggttgggaaacacatgagtggataatcatttatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttaga 149  Q
    ||||||||||||||   |||||||| ||||||||||||  || | ||  |||||| ||| |||| ||| ||||| || |||||||||||||||||||| |    
T  6200235 ttttggggagagatatgtggggttgagaaacacatgagatgagagtc-cttatgagcaatttggatgaatcttgagataccaaaagagaagatccttata 6200137  T
Q  150 aaatcaaaggctaagggttggttatcttttgggg--ttagaatctagagttgggaaacaccttg 211  Q
    || ||||| | ||||||||| || | |||| |||  ||||| |||||| |||| ||||| ||||    
T  6200136 aagtcaaatgataagggttgattttttttttgggcattagattctagaattggaaaacatcttg 6200073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 181
Target Start/End: Original strand, 8832044 - 8832121
Alignment:
Q  104 aacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttgg 181  Q
    |||||||| ||||| ||||| || | |||||  ||| |||| |  |||||||||||||||||||||||||| ||||||    
T  8832044 aacaacttaggtgaatcttgagatatcaaaaacgaatatccgtgaaaaatcaaaggctaagggttggttattttttgg 8832121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 40632342 - 40632399
Alignment:
Q  150 aaatcaaaggctaagggttggttatctttt-ggggttagaatctagagttgggaaaca 206  Q
    |||||||| | |||||||||||| |||||| ||||||||| |||||||||| ||||||    
T  40632342 aaatcaaatgttaagggttggttctcttttgggggttagattctagagttgagaaaca 40632399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 41961198 - 41961237
Alignment:
Q  44 ggtgcattttggggagagattcatggggttgggaaacacat 84  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  41961198 ggtgctttttggggagagattcat-gggttgggaaacacat 41961237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 54571043 - 54571075
Alignment:
Q  137 gaagatccttagaaaatcaaaggctaagggttg 169  Q
    ||||||| |||||||||||||||||||||||||    
T  54571043 gaagatctttagaaaatcaaaggctaagggttg 54571075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 8e-57; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 45726677 - 45726883
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    ||||||||||||||||||||||||  | | || ||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||| | ||||||    
T  45726677 tgaatcttggagaaccaaaagagggagctcttgggaaagggttggtgccttttgggga-agattcatggggtttggaaacacatgagtggagagtcattt 45726775  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagtt 198  Q
     ||| ||||||||||||||| ||||| |||||||||||||||||||||  ||||||||||||||||||||||| |||||| ||||||||| ||||| |||    
T  45726776 gtgagcaacttgggtgagtcatgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagggtt 45726875  T
Q  199 gggaaaca 206  Q
     |||||||    
T  45726876 aggaaaca 45726883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 1632153 - 1631946
Alignment:
Q  1 tgaatcttggagaaccaaaagaggagg-tttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||| ||||||||||||| || | ||  | ||||||||||||  ||||||||| |||||||||||||||||||||||||||||||| | || ||    
T  1632153 tgaatcttggggaaccaaaagagggggctcttgtgaaaagggttggtgtcttttgggga-agattcatggggttgggaaacacatgagtggagagtcttt 1632055  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| ||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| |||||| ||||||||| ||||||||    
T  1632054 tgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagt 1631955  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  1631954 tgggaaaca 1631946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 42288530 - 42288324
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    ||||||||| |||||||||||||| || | || ||||| |||||||||| ||||||| |||  ||||||||||||||||||||||||||||| | || ||    
T  42288530 tgaatcttgaagaaccaaaagagggggctcttgggaaaagggttggtgccttttgggaaga--ttcatggggttgggaaacacatgagtggagagtcttt 42288433  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| ||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| |||||| ||| ||||| ||||||||    
T  42288432 tgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttcgggtttagattctagagt 42288333  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  42288332 tgggaaaca 42288324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 35447295 - 35447098
Alignment:
Q  10 gagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatttatgaacaac 109  Q
    ||||||||||||||| | | ||  | ||||||||||||| ||||||| | |||||||||||||||||||||||||||||||| | || ||| ||| ||||    
T  35447295 gagaaccaaaagaggggctcttgtgaaaagggttggtgccttttgggaa-agattcatggggttgggaaacacatgagtggagagtcttttgtgagcaac 35447197  T
Q  110 ttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagttgggaaaca 206  Q
    ||||||||||||||| | ||||||||||||||| |||||  ||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||    
T  35447196 ttgggtgagtcttgtaaaaccaaaagagaagatacttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagttgggaaaca 35447098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 24397804 - 24398007
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | || ||||| |||||||||| |||| |||||||| |||| ||| ||| ||||||||||||||| | |||||    
T  24397804 tgaatcttggagaaccaaaagagggggctcttgggaaaagggttggtgccttttagggagagactcatcgggctggtaaacacatgagtggagagtcatt 24397903  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttggggttagaatctagagttg 199  Q
    | ||| ||| |||||| |||||||||| |||||||||||| ||||||||||| ||||| |||||||||||||  ||||| ||||||||| | ||||||||    
T  24397904 tgtgaccaatttgggttagtcttgtgaaaccaaaagagaatatccttagaaagtcaaa-gctaagggttggt--tctttgggggttagattatagagttg 24398000  T
Q  200 ggaaaca 206  Q
    |||||||    
T  24398001 ggaaaca 24398007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 17450338 - 17450544
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataa-tcatt 99  Q
    |||||||||||||||||||||||| || | || |||||||||||||||  |||| | | |||||||||||| ||||||||||||||| | |  | ||| |    
T  17450338 tgaatcttggagaaccaaaagagggggctcttgggaaagggttggtgccctttgtgaa-agattcatggggatgggaaacacatgagcgaaggagtcaat 17450436  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatct-tttggggttagaatctagagtt 198  Q
    | |||  |||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||| || ||| || |||||| || |||||||||    
T  17450437 tgtgagaaacttgggtgagtcttgtgaaaccaaaagagaagatcattaggaaatcaaaggctaagggttgattctctattgggggttggattctagagtt 17450536  T
Q  199 gggaaaca 206  Q
    || |||||    
T  17450537 ggcaaaca 17450544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 42262030 - 42261821
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    |||||||||||||||||||| ||| || | || ||| ||||||||||| ||| || |||||||||||||| ||||||||||||| |  ||| | |  |||    
T  42262030 tgaatcttggagaaccaaaaaagggggctctttggagagggttggtgcctttaggtgagagattcatgggattgggaaacacatcaaaggagagtt-ttt 42261932  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttggggttagaatctagagttgg 200  Q
    |||| ||||||||| |||||||  ||||||||||||| | ||| |||| |||||||| |||| || ||||||   ||| |||||||||||||||||||||    
T  42261931 atgagcaacttgggcgagtcttacgagaccaaaagagtatatcattaggaaatcaaaagctacggattggttccttttaggggttagaatctagagttgg 42261832  T
Q  201 gaaacaccttg 211  Q
    |||||||||||    
T  42261831 gaaacaccttg 42261821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 33647916 - 33648118
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||| |||||||||||| | || ||||| |||||||||| ||||| ||||||||||| | |||||| ||||| |||||| || | |||||    
T  33647916 tgaatcttggagaatcaaaagaggaggctcttgggaaaagggttggtgccttttgaggagagattcacgaggttggaaaacatatgagtagagagtcatt 33648015  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatcctta-gaaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | | | | |||| || ||||||| | | |||||||||||||||||||| | |||||||||   |||||||  ||||||||| ||||||||| ||||||||    
T  33648016 tgttagctacttaggcgagtcttataaaaccaaaagagaagatccttagggaaatcaaag--caagggttaattatcttttgggggttagattctagagt 33648113  T
Q  198 tggga 202  Q
    |||||    
T  33648114 tggga 33648118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 45 - 211
Target Start/End: Complemental strand, 30218410 - 30218245
Alignment:
Q  45 gtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatttatgaacaacttgggtgagtcttgtgagaccaaaagagaagatcc 144  Q
    |||| ||||||||||||||||||||||||||||||||||  |  ||| |||| ||| ||| ||||||| |||||||||| || |||||||| |  |||||    
T  30218410 gtgccttttggggagagattcatggggttgggaaacacaccaaaggagaatc-tttgtgagcaacttgagtgagtcttgcgaaaccaaaag-ggggatcc 30218313  T
Q  145 ttagaaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagttgggaaacaccttg 211  Q
    |||| |||||||| |||||   |||||| |||||| ||||||||  ||||||||||||||||||||||    
T  30218312 ttaggaaatcaaaagctaaatattggttctcttttgggggttaggctctagagttgggaaacaccttg 30218245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 7451047 - 7451158
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcgg-aaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | || || ||||||||| ||  |||||| || ||||| |||||||||| ||||||||||||||| | |||||    
T  7451047 tgaatcttggagaaccaaaagagggggctctttggtaaagggttgatgacttttggaga-agatttatggggttggaaaacacatgagtggagagtcatt 7451145  T
Q  100 tatgaacaacttg 112  Q
    | ||| |||||||    
T  7451146 tgtgagcaacttg 7451158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 200
Target Start/End: Original strand, 43731004 - 43731093
Alignment:
Q  110 ttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttggggttagaatctagagttgg 200  Q
    |||||||| ||||| || ||||||| |||| |||| ||| ||||||||| |||| |||||||| ||||||||||||| | |||||||||||    
T  43731004 ttgggtgaatcttgggaaaccaaaatagaatatccgtaggaaatcaaagtctaaaggttggtt-tcttttggggttaaattctagagttgg 43731093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 34811651 - 34811585
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcat 67  Q
    |||||||| ||||||||||||||| ||||||| | ||| ||||||||| |||| |||||| ||||||    
T  34811651 tgaatcttagagaaccaaaagagggggtttttggaaaaaggttggtgcctttttgggagatattcat 34811585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24197646 - 24197731
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgag 87  Q
    |||||||||| ||||||||||||| |  | || ||| ||||||||||| |||||||||| || | || ||| |||||||||||||||    
T  24197646 tgaatcttggggaaccaaaagaggggactcttgggagagggttggtgccttttggggagggaatgat-gggatgggaaacacatgag 24197731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 40935600 - 40935543
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttgggga 58  Q
    ||||||| |||||||||||||| |||| | || ||||||||||||||| | |||||||    
T  40935600 tgaatctaggagaaccaaaagatgaggctcttgggaaagggttggtgcctattgggga 40935543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 109; Significance: 5e-55; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 11305 - 11512
Alignment:
Q  1 tgaatcttggagaaccaaaaga-ggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||| || | | ||  ||||||||||||||| |||||| || |||||||||||||||||||||||||||||||| | |||||    
T  11305 tgaatcttggagaaccaaaagatggggctcttggggaaagggttggtgccttttggaga-agattcatggggttgggaaacacatgagtggagagtcatt 11403  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatc-ttttggggttagaatctagagt 197  Q
    | ||| ||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||| ||||| || || ||||||||||||| ||||||||    
T  11404 tctgagcaacttgggtgagtcttgtgaaaccaaaagagaagatcattagtaaaatcaaaggctaaaggttgtttctctttttggggttagattctagagt 11503  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  11504 tgggaaaca 11512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 107; Significance: 8e-54; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 7075 - 7272
Alignment:
Q  1 tgaatcttggagaaccaaaagaggagg-tttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | ||  | ||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||| | || ||    
T  7075 tgaatcttggagaaccaaaagagggggctcttgtgaaaagggttggtgccttttgggga-agattcatggggttggaaaacacatgagtggagagtcttt 7173  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagag 196  Q
    | ||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||| |||||||    
T  7174 tgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtaaaatcaaaggctaagggttggttctcttttgggggttagattctagag 7272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 2e-51; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 11383733 - 11383938
Alignment:
Q  1 tgaatcttggagaaccaaaagaggagg-tttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | ||  | ||||||||||||| ||||| ||| |||||||||||||||||||| |||| |||||| | || ||    
T  11383733 tgaatcttggagaaccaaaagagggggctattgtgaaaagggttggtgccttttgagga-agattcatggggttgggaaatacataagtggaaagtcttt 11383831  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| ||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| |||||| ||||||||| ||||||||    
T  11383832 tgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagt 11383931  T
Q  198 tgggaaa 204  Q
    |||||||    
T  11383932 tgggaaa 11383938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 40328526 - 40328733
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaa-gggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| |||| || ||||| |||||||||| |||| |||| |||||||||||| ||||||||||||||||| | | || ||    
T  40328526 tgaatcttggagaaccaaaagagggggttcttgggaaaagggttggtgccttttaggga-agattcatggggatgggaaacacatgagtgtagagtcttt 40328624  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| ||||||||||||||||||||| |||||||||||||||| ||||  ||||||||||||| | ||||||| |||||| ||||||||| ||||||||    
T  40328625 tgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatctttagtgaaatcaaaggctatgagttggttctcttttgggggttagattctagagt 40328724  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  40328725 tgggaaaca 40328733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 40221492 - 40221699
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaaggg-ttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||| ||||||||||| ||| || | || |||||||| || |||| ||||||||| |||||||||||||||||||||||||||||||| | || ||    
T  40221492 tgaatcttcgagaaccaaaatagggggctcttgggaaaggggttagtgccttttgggga-agattcatggggttgggaaacacatgagtggagagtcttt 40221590  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| |||||| |||||||||||| | |||||||||||||||||||||  |||||||||||||| |||||||| |||||| ||||||||| ||||||||    
T  40221591 tgtgagcaacttaggtgagtcttgtaaaaccaaaagagaagatccttagtgaaatcaaaggctaaaggttggttctcttttgggggttagattctagagt 40221690  T
Q  198 tgggaaaca 206  Q
    |||||||||    
T  40221691 tgggaaaca 40221699  T

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Target: chr8; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 42435412 - 42435205
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaag-ggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | || |||||  ||||||||  ||||||||| |||||||||||||||||||||| |||| |||| | || ||    
T  42435412 tgaatcttggagaaccaaaagagggggctcttgggaaaaaggttggtgacttttgggga-agattcatggggttgggaaacatatgaatggagagtcttt 42435314  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatcttttg-gggttagaatctagagt 197  Q
    | ||| ||||||| ||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  42435313 tgtgagcaacttgagtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgagggttagattctagagt 42435214  T
Q  198 tgggaaaca 206  Q
    ||| |||||    
T  42435213 tggtaaaca 42435205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 2 - 206
Target Start/End: Original strand, 44353540 - 44353746
Alignment:
Q  2 gaatcttggagaaccaaaagaggaggtttttcggaa-agggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    |||||||||||||| |||||||| || | ||  ||| ||||||||||| |||||| || |||||||||||||||| ||||||||||||||| | ||||      
T  44353540 gaatcttggagaactaaaagagggggctcttgtgaagagggttggtgccttttggaga-agattcatggggttggaaaacacatgagtggagagtcatcg 44353638  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagtt 198  Q
     ||| ||||||||||||||||||||| ||||||||| ||||| |||||  ||||||||||||||||||||||| |||||| ||||||||| |||||||||    
T  44353639 gtgagcaacttgggtgagtcttgtgaaaccaaaagaaaagattcttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagtt 44353738  T
Q  199 gggaaaca 206  Q
    ||||||||    
T  44353739 gggaaaca 44353746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 55 - 206
Target Start/End: Original strand, 4283325 - 4283478
Alignment:
Q  55 gggagagattcatggggttgggaaacacatgagtggataatcatttatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaat 153  Q
    |||| |||||||||||||||||||||||||||||||| | || ||| |||  ||||||| |||||||||||| |||||||||||||||||||||  ||||    
T  4283325 gggaaagattcatggggttgggaaacacatgagtggaaagtcttttgtgagaaacttggttgagtcttgtgaaaccaaaagagaagatccttagtgaaat 4283424  T
Q  154 caaaggctaagggttggttatctttt-ggggttagaatctagagttgggaaaca 206  Q
    ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||    
T  4283425 caaaggctaagggttggttctcttttgggggttagattctagagttgggaaaca 4283478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 40585522 - 40585669
Alignment:
Q  50 ttttggggagagattcatggggttgggaaacacatgagtggataatcatttatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttaga 149  Q
    |||||| ||||||||||||||||| | |||||||| |  ||| | || ||| ||| ||| |||||||||| |||  |||||||||||||||||||||||     
T  40585522 ttttggtgagagattcatggggtttgaaaacacatcaaaggagagtc-tttgtgagcaatttgggtgagtattggtagaccaaaagagaagatccttagg 40585620  T
Q  150 aaatcaaaggctaagggttggttatcttttggggttagaatctagagtt 198  Q
    ||||||||| ||||||||||||| |||||||||| |||| |||| ||||    
T  40585621 aaatcaaagactaagggttggttctcttttgggggtagattctaaagtt 40585669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 106 - 206
Target Start/End: Original strand, 18655253 - 18655354
Alignment:
Q  106 caacttgggtgagtcttgtgagaccaaaagagaagatccttaga-aaatcaaaggctaagggttggttatcttttggggttagaatctagagttgggaaa 204  Q
    |||||| |||||||||||||| | |||||||||||||||||||  |||||||||||||||||||| |  ||||||||||||||| |||||| || |||||    
T  18655253 caacttcggtgagtcttgtgaaatcaaaagagaagatccttagtgaaatcaaaggctaagggttgatactcttttggggttagattctagacttaggaaa 18655352  T
Q  205 ca 206  Q
    ||    
T  18655353 ca 18655354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 3846238 - 3846045
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    ||||||||| |||||||||||| ||| | ||  | |||| |||||||  |||||||||||||||||||||||||||||||||||||| | | | || |||    
T  3846238 tgaatcttgaagaaccaaaagaagagctcttg-gaaaagagttggtgtcttttggggagagattcatggggttgggaaacacatgagagaagattc-ttt 3846141  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttggggttagaatctagagt 197  Q
     ||| ||| |||||| | ||||  || ||||||||||| |||| || | ||||||||||  || ||||||||   ||||||||||||||||||||||    
T  3846140 gtgagcaaattgggtaaatctttggataccaaaagagacgatcttttggaaatcaaaggtaaatggttggtt-cattttggggttagaatctagagt 3846045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 10020295 - 10020402
Alignment:
Q  102 tgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttggggttagaatctagagttggg 201  Q
    |||||||||| ||||| ||||  |  |||||||||| |||||||||| ||||||||||||||||||| ||| |||||| ||||| || ||||||||||||    
T  10020295 tgaacaacttaggtgaatcttagggtaccaaaagaggagatccttaggaaatcaaaggctaagggtttgtt-tctttttgggttggattctagagttggg 10020393  T
Q  202 aaacacctt 210  Q
    |||||||||    
T  10020394 aaacacctt 10020402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 2999941 - 2999823
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    |||||||||||||||||||||||| |||| || ||| | ||||||||  ||||||||| |||||||||||| || ||||||||||||| || | ||| ||    
T  2999941 tgaatcttggagaaccaaaagagggggttcttgggatatggttggtgtcttttggggaaagattcatggggatgagaaacacatgagtagagagtcaatt 2999842  T
Q  101 atgaacaacttgggtgagt 119  Q
     ||| ||||||||| ||||    
T  2999841 gtgagcaacttgggcgagt 2999823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 10101580 - 10101370
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatg----gg----gttgggaaacacatgagtggat 92  Q
    |||| |||||||||||||||||||||| | || ||||||||||| ||||||||||| |||||||||||    ||    | | |||||||||||||  |||    
T  10101580 tgaaccttggagaaccaaaagaggaggctcttgggaaagggttgctgcattttgggaagagattcatgacttggggaagataggaaacacatgagaagat 10101481  T
Q  93 aatcatttatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttggggttagaatct 192  Q
     |   ||| ||| |||||||| ||| ||||  |||| |||||||| |||||||||  ||||||||| ||||||||||| ||  ||||||||||||| |||    
T  10101480 gagtctttgtgagcaacttggatgaatcttaggagatcaaaagaggagatccttattaaatcaaagtctaagggttgg-tacgttttggggttagattct 10101382  T
Q  193 agagttgggaaa 204  Q
    || ||| |||||    
T  10101381 agtgttaggaaa 10101370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 110 - 178
Target Start/End: Complemental strand, 33655616 - 33655548
Alignment:
Q  110 ttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttt 178  Q
    |||||||| ||||  |||| |||||||||||||||||||||||||||||| |||||||||||| |||||    
T  33655616 ttgggtgaatcttaggagaacaaaagagaagatccttagaaaatcaaaggttaagggttggttctcttt 33655548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22976281 - 22976368
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcg-gaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtg 89  Q
    ||||||||||||||||||||||||||| | || |  ||||||||||||| ||||||||| |||||||||||||| | |||||||||||||    
T  22976281 tgaatcttggagaaccaaaagaggaggctcttggaaaaagggttggtgccttttgggga-agattcatggggtt-gaaaacacatgagtg 22976368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 28461308 - 28461375
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatg 68  Q
    ||||||||||||||||||||||||| | | || ||||| ||||||| | ||||||||| |||||||||    
T  28461308 tgaatcttggagaaccaaaagaggaagctcttaggaaatggttggttccttttggggatagattcatg 28461375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 9633904 - 9633816
Alignment:
Q  55 gggagagattcatggggttgggaaacacatgagtggataatcatttatgaacaacttgggtgagtcttgtgagaccaaaagagaagatc 143  Q
    |||||||||| |||||||||| |||||||| ||  || | |||||| ||| |||||||||||| ||||  || |||||| |||||||||    
T  9633904 gggagagattaatggggttggtaaacacataagatgagagtcatttgtgagcaacttgggtgaatcttaggaaaccaaacgagaagatc 9633816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 10240037 - 10240109
Alignment:
Q  131 aaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttggggttagaatctagagttgggaaaca 206  Q
    |||| |||||||||||| |||||||  ||||||| ||||||| ||||| ||||||||| |||||| ||||||||||    
T  10240037 aaaaaagaagatccttaaaaaatca--ggctaagagttggttctcttt-ggggttagattctagatttgggaaaca 10240109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 10020187 - 10020254
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtg-cattttggggagagattcat 67  Q
    |||||||| ||||||||||||||| || | || |||||||||| ||| |||||| |||||||||||||    
T  10020187 tgaatcttagagaaccaaaagagggggctcttgggaaagggttcgtgtcatttttgggagagattcat 10020254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 3817718 - 3817670
Alignment:
Q  36 aaagggttggtgcattttggggagagattcatggggttgggaaacacat 84  Q
    ||||||||||||| |||||| || |||||||||||||||| ||| ||||    
T  3817718 aaagggttggtgccttttggagaaagattcatggggttggaaaatacat 3817670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 80704 - 80497
Alignment:
Q  1 tgaatcttggagaaccaaaagaggagg-tttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    |||||||||||||||||||||||| || | ||  | ||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||| | || ||    
T  80704 tgaatcttggagaaccaaaagagggggctcttatgaaaagggttggtgccttttgggga-agattcatggggttgggaaacacatgagcggagagtcttt 80606  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagt 197  Q
    | ||| |||||||||||||||||| || || ||||||| ||||||||||  ||||||||||||||||||||||| | |||| ||||||||| ||||||||    
T  80605 tgtgagcaacttgggtgagtcttgggaaactaaaagagtagatccttagtgaaatcaaaggctaagggttggttctattttgggggttagattctagagt 80506  T
Q  198 tgggaaaca 206  Q
    | |||||||    
T  80505 taggaaaca 80497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 490865 - 490656
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    |||||||||||||||||||| ||| || | || ||| ||||||||||| ||| || |||||||||||||| ||||||||||||| |  ||| | |  |||    
T  490865 tgaatcttggagaaccaaaaaagggggctctttggagagggttggtgcctttaggtgagagattcatgggattgggaaacacatcaaaggagagtt-ttt 490767  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttttggggttagaatctagagttgg 200  Q
    |||| ||||||||| |||||||  ||||||||||||| | ||| |||| |||||||| |||| || ||||||   ||| |||||||||||||||||||||    
T  490766 atgagcaacttgggcgagtcttacgagaccaaaagagtatatcattaggaaatcaaaagctacggattggttccttttaggggttagaatctagagttgg 490667  T
Q  201 gaaacaccttg 211  Q
    |||||||||||    
T  490666 gaaacaccttg 490656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 18422 - 18222
Alignment:
Q  1 tgaatcttggagaaccaaaagaggagg-tttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcatt 99  Q
    ||||||||||||||| |||||||| || | ||  | ||||||||||||| ||||||||  ||||||||| |||| | ||||||||||||||| | | |||    
T  18422 tgaatcttggagaacaaaaagagggggctcttgtgaaaagggttggtgccttttgggggaagattcatgaggtt-gaaaacacatgagtggagagttatt 18324  T
Q  100 tatgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatcttttggggttagaatctagagtt 198  Q
    | ||| ||||||| ||||||||||| | |||||||||||||||||||||  ||||||||| ||||| ||||||| ||||||||||||||| | |||||||    
T  18323 tgtgagcaacttgagtgagtcttgtaaaaccaaaagagaagatccttagtgaaatcaaagactaagagttggttctcttttggggttagattatagagtt 18224  T
Q  199 gg 200  Q
    ||    
T  18223 gg 18222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 1826 - 1612
Alignment:
Q  1 tgaatcttggagaaccaaaagaggaggtttttcggaaagggttggtgcattttggggagagattcatggggttgggaaacacatgagtggataatcattt 100  Q
    ||||||||| |||||||||||||| |  | || ||  ||| ||||||  ||||| |||||||||||||  |||| ||||||||| |   || | |||||     
T  1826 tgaatcttgaagaaccaaaagaggggactcttgggcgaggcttggtgtcttttgtggagagattcatgtagttgagaaacacatcatatgagagtcattg 1727  T
Q  101 atgaacaacttgggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggc----------taagggttggttatcttttggggttagaat 190  Q
     ||| ||||||||| |||||||| |||| ||||||||||||||||||| |||||||| ||          |||| ||||||| ||||||||||||||| |    
T  1726 -tgagcaacttgggcgagtcttgggagatcaaaagagaagatccttaggaaatcaaaagcttataacttataagtgttggttctcttttggggttagatt 1628  T
Q  191 ctagagttgggaaaca 206  Q
    ||||||||||||||||    
T  1627 ctagagttgggaaaca 1612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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