View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16995_high_4 (Length: 563)
Name: NF16995_high_4
Description: NF16995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16995_high_4 |
 |  |
|
Alignment Details
Target: chr8 (Bit Score: 524; Significance: 0; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 524; E-Value: 0
Query Start/End: Original strand, 1 - 548
Target Start/End: Complemental strand, 38321242 - 38320695
Alignment:
| Q |
1 |
aaaaaatacatgtttgaagtaggatgtgctgtgccattaatcatgttagcagtttcccttaaaggcaacaagaacgcacaaatcttttcaactcttttcc |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
38321242 |
aaaaaatacatgtttgaagtaggatgtgctgtgccattaatcatgttagcagtttcccttaaaggcaacaagaacacacaaatcttttcaactcttttcc |
38321143 |
T |
 |
| Q |
101 |
attcttctaccgaaggacataactcataattatcatcatacaagtgaagactttcaaacacacacctatatttaagagcactttcaagcatcaaataagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38321142 |
attcttctaccgaaggacataactcataattatcatcatacaagtgaagactttcaaacacacacctatatttaagagcactttcaagcatcaaataagt |
38321043 |
T |
 |
| Q |
201 |
tgagttcacagtcatagacatgtccagatgcaagcgaactgaactatcaacaccaccaaccttttcaacgcactccttaaatttttggcttcgactcttt |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
38321042 |
tgagttcacagtcatagacatgtccagatgcaagcgaactgaactatcaacaccaccaaccttttcaacgcactccttaaatttttgccttcgactcttt |
38320943 |
T |
 |
| Q |
301 |
gaatctctaaaaaacaagatgctctgtctaattttcgacacagcatcactaactagtttcaacccctcttcaacaatcaattttaaaagacgtgcataac |
400 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
38320942 |
gaatccctaaaaaacaagatgctctgtctaattttcgacacagcatcactaactagtttcaacccctcttcaacaatcaattttaaaacacgtgcataac |
38320843 |
T |
 |
| Q |
401 |
aatgcccgtgaaagaactctccatcacataacaacccattttgcaaaccaagttgagttttcaatagttcttgcaaaatgtcattatcagatgaatcatc |
500 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
38320842 |
aatgcccgtgaaagaactccccatcacataacaacccattttgcaaaccaagttgagttttcaatagttcttgcaaaatgtcattctcagatgaatcatc |
38320743 |
T |
 |
| Q |
501 |
taaagtgagagagaagatctttttctctattccccaatcactcaaaaa |
548 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38320742 |
taaagtgagagagaagatctttttctctattccccaatcactcaaaaa |
38320695 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 16 - 545
Target Start/End: Complemental strand, 38325977 - 38325448
Alignment:
| Q |
16 |
gaagtaggatgtgctgtgccattaatcatgttagcagtttcccttaaaggcaacaagaacgcacaaatcttttcaactcttttccattcttctaccgaag |
115 |
Q |
| |
|
||||||||||| | |||| |||||||||||||||||||||| | |||||||||||||| ||||| |||||||| ||||||||| | ||||||||||||| |
|
|
| T |
38325977 |
gaagtaggatgcgttgtgtcattaatcatgttagcagtttcacaaaaaggcaacaagaatgcacagatcttttctactcttttctactcttctaccgaag |
38325878 |
T |
 |
| Q |
116 |
gacataactcataattatcatcatacaagtgaagactttcaaacacacacctatatttaagagcactttcaagcatcaaataagttgagttcacagtcat |
215 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| | |||| |
|
|
| T |
38325877 |
gacataactcataattatcctcatacaagtgaagactttcaaacacacgccgatatttaagagcactttcaagcatcaaataagttgagttcagactcat |
38325778 |
T |
 |
| Q |
216 |
agacatgtccagatgcaagcgaactgaactatcaacaccaccaaccttttcaacgcactccttaaatttttggcttcgactctttgaatctctaaaaaac |
315 |
Q |
| |
|
|||| |||| ||||||||||||| |||||||| ||||||||||||||||||| ||| ||||||||||| | |||| ||||||||||| || | |||| |
|
|
| T |
38325777 |
agacgagtcctgatgcaagcgaacggaactatcgacaccaccaaccttttcaatgcattccttaaatttctcccttctactctttgaatgcctcacaaac |
38325678 |
T |
 |
| Q |
316 |
aagatgctctgtctaattttcgacacagcatcactaactagtttcaacccctcttcaacaatcaattttaaaagacgtgcataacaatgcccgtgaaaga |
415 |
Q |
| |
|
| |||||||| ||||||||| ||||| ||||||||||||||||||||||| ||||||||||||| ||||||| ||||||| |||| ||||||||||||| |
|
|
| T |
38325677 |
atgatgctctctctaatttttgacacggcatcactaactagtttcaacccgtcttcaacaatcagatttaaaacacgtgcaaaacagtgcccgtgaaaga |
38325578 |
T |
 |
| Q |
416 |
actctccatcacataacaacccattttgcaaaccaagttgagttttcaatagttcttgcaaaatgtcattatcagatgaatcatctaaagtgagagagaa |
515 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| |||| ||||||| ||||||| | || | ||| || ||||||||||||||| ||||| || |
|
|
| T |
38325577 |
actctccatcacacaacaacccattttgcaaaccaagatgagatttcaattgttcttgtagaacattattctcgactgaatcatctaaagtaagagaaaa |
38325478 |
T |
 |
| Q |
516 |
gatctttttctctattccccaatcactcaa |
545 |
Q |
| |
|
|||||||||||||||||||||||| |||| |
|
|
| T |
38325477 |
aatctttttctctattccccaatcattcaa |
38325448 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 1 - 545
Target Start/End: Complemental strand, 38300497 - 38299953
Alignment:
| Q |
1 |
aaaaaatacatgtttgaagtaggatgtgctgtgccattaatcatgttagcagtttcccttaaaggcaacaagaacgcacaaatcttttcaactcttttcc |
100 |
Q |
| |
|
|||||||||| ||| ||||||||||||| |||| ||||||||||||| |||||||| || ||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
38300497 |
aaaaaatacaagttggaagtaggatgtgttgtggcattaatcatgttggcagtttcactaaaaggcaacaagaacacacaaatcttttgtactcttttcc |
38300398 |
T |
 |
| Q |
101 |
attcttctaccgaaggacataactcataattatcatcatacaagtgaagactttcaaacacacacctatatttaagagcactttcaagcatcaaataagt |
200 |
Q |
| |
|
| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||| |
|
|
| T |
38300397 |
actcttctaccgaaggacataacacataactatcatcatacaagtgaagactttcaaacacacgccgatatttaagagcactttcaagcattgaataagt |
38300298 |
T |
 |
| Q |
201 |
tgagttcacagtcatagacatgtccagatgcaagcgaactgaactatcaacaccaccaaccttttcaacgcactccttaaatttttggcttcgactcttt |
300 |
Q |
| |
|
||||||||| | ||| | ||||||||||||||||||| |||| ||||||||||||||||||| ||| |||||||||||||||| |||| ||||||| |
|
|
| T |
38300297 |
tgagttcactcttttaggcgtgtccagatgcaagcgaacggaacaatcaacaccaccaacctttgcaatacactccttaaatttttcccttccactcttt |
38300198 |
T |
 |
| Q |
301 |
gaatctctaaaaaacaagatgctctgtctaattttcgacacagcatcactaactagtttcaacccctcttcaacaatcaattttaaaagacgtgcataac |
400 |
Q |
| |
|
|||| || | ||||| |||||| | ||||||||| ||| |||| ||||||||||||||||||||||||||||||| |||||||| |||||| ||| |
|
|
| T |
38300197 |
gaatgcctcacaaacatgatgctatctctaattttacacaggacatccctaactagtttcaacccctcttcaacaatcagttttaaaatgcgtgcaaaac |
38300098 |
T |
 |
| Q |
401 |
aatgcccgtgaaagaactctccatcacataacaacccattttgcaaaccaagttgagttttcaatagttcttgcaaaatgtcattatcagatgaatcatc |
500 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||||| |||||| |||||||| ||| ||| |||||||||||| | ||| | | ||||||| || |
|
|
| T |
38300097 |
aatgcccgtgaaagaactccccgtcacataacaacccattatgcaaaacaagttgattttgaaatttttcttgcaaaattttattcttaaatgaatcttc |
38299998 |
T |
 |
| Q |
501 |
taaagtgagagagaagatctttttctctattccccaatcactcaa |
545 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||||||||| |||| |
|
|
| T |
38299997 |
taaagtgagagagaaaatcttttcctctattccccaatcattcaa |
38299953 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 2 - 548
Target Start/End: Complemental strand, 38313737 - 38313191
Alignment:
| Q |
2 |
aaaaatacatgtttgaagtaggatgtgctgtgccattaatcatgttagcagtttcccttaaaggcaacaagaacgcacaaatcttttcaactcttttcca |
101 |
Q |
| |
|
||||||||| ||| ||||||||||||| || ||||||||||||||| |||||||| | ||||| |||||||| |||||||||||||| ||||||||||| |
|
|
| T |
38313737 |
aaaaatacaagttggaagtaggatgtgttgcgccattaatcatgttggcagtttcacaaaaaggtaacaagaatgcacaaatcttttctactcttttcca |
38313638 |
T |
 |
| Q |
102 |
ttcttctaccgaaggacataactcataattatcatcatacaagtgaagactttcaaacacacacctatatttaagagcactttcaagcatcaaataagtt |
201 |
Q |
| |
|
|||||| ||| ||||||| | ||||||| |||||||||||||||||||||||||||| ||| | ||||||||||||||||| |||||||||||||||| |
|
|
| T |
38313637 |
gtcttctgccgcaggacatgaatcataatcatcatcatacaagtgaagactttcaaacgcacgctgatatttaagagcactttgaagcatcaaataagtt |
38313538 |
T |
 |
| Q |
202 |
gagttcacagtcatagacatgtccagatgcaagcgaactgaactatcaacaccaccaaccttttcaacgcactccttaaatttttggcttcgactctttg |
301 |
Q |
| |
|
|||||||| |||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || | || |||||| | |
|
|
| T |
38313537 |
gagttcactctcatagacatatctagatgcaagcgaaccgaactatcaacaccaccaaccttttcaacgcactccttaaaaaatttccatctactcttgg |
38313438 |
T |
 |
| Q |
302 |
aatctctaaaaaacaagatgctctgtctaattttcgacacagca-tcactaactagtttcaacccctcttcaacaatcaattttaaaagacgtgcataac |
400 |
Q |
| |
|
||| || | |||||| ||||||| ||| || || | ||| || || | ||||||||| ||||| || |||||||||| ||||||| || ||| ||| |
|
|
| T |
38313437 |
aatgccttacaaacaaaatgctctctctgatcttacagacaacactctc-aactagttttaacccttcatcaacaatcaggtttaaaacgcgggcaaaac |
38313339 |
T |
 |
| Q |
401 |
aatgcccgtgaaagaactctccatcacataacaacccattttgcaaaccaagttgagttttcaatagttcttgcaaaatgtcattatcagatgaatcatc |
500 |
Q |
| |
|
||||| | |||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||| ||||||||||||||||||| |||||||||||||| |
|
|
| T |
38313338 |
aatgcacatgaaagaactctccatcacataacaacccattttgcaaacaaagttgattttttaattgttcttgcaaaatgtcattctcagatgaatcatc |
38313239 |
T |
 |
| Q |
501 |
taaagtgagagagaagatctttttctctattccccaatcactcaaaaa |
548 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
38313238 |
taaagtgagagagaaaatctttttctctattccccaatcactcaaaaa |
38313191 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 1 - 548
Target Start/End: Complemental strand, 38306406 - 38305869
Alignment:
| Q |
1 |
aaaaaatacatgtttgaagtaggatgtgctgtgccattaatcatgttagcagtttcccttaaaggcaacaagaacgcacaaatcttttcaactcttttcc |
100 |
Q |
| |
|
|||||||||| ||| ||||| ||||||| || ||||| |||||||| |||||||| | |||||||||| ||| |||||||||||||| |||||||| | |
|
|
| T |
38306406 |
aaaaaatacaagttggaagtgggatgtgttgcaccattgatcatgttggcagtttcacgaaaaggcaacatgaatgcacaaatcttttccactcttttgc |
38306307 |
T |
 |
| Q |
101 |
attcttctaccgaaggacataactcataattatcatcatacaagtgaagactttcaaacacacacctatatttaagagcactttcaagcatcaaataagt |
200 |
Q |
| |
|
| |||||||| | |||||| | ||||||||||||||| ||||||||||||| ||||||||||||||| || |||||||||||||| |
|
|
| T |
38306306 |
a----------gaaggacacgagacataatcaccatcatacaagtgaaaactttcaaacacatgttgatatttaagagcactatcgagcatcaaataagt |
38306217 |
T |
 |
| Q |
201 |
tgagttcacagtcatagacatgtccagatgcaagcgaactgaactatcaacaccaccaaccttttcaacgcactccttaaatttttggcttcgactcttt |
300 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
38306216 |
tgagttcacagtcatagacatgtccatatgcaagcgaactgaactgtcaataccaccaaccttttcaacgcactccttaaattttttccttctactcttt |
38306117 |
T |
 |
| Q |
301 |
gaatctctaaaaaacaagatgctctgtctaattttcgacacagcatcactaactagtttcaacccctcttcaacaatcaattttaaaagacgtgcataac |
400 |
Q |
| |
|
||||| || | |||||||||||||| ||||||||| ||||| || ||||||||||||| ||||||||||||||||||| |||||||| |||||| ||| |
|
|
| T |
38306116 |
gaatccctcacaaacaagatgctctctctaattttagacacgtcaccactaactagttttaacccctcttcaacaatcagttttaaaacgcgtgcagaac |
38306017 |
T |
 |
| Q |
401 |
aatgcccgtgaaagaactctccatcacataacaacccattttgcaaaccaagttgagttttcaatagttcttgcaaaatgtcattatcagatgaatcatc |
500 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||| ||||||||||||||| | | | |||| || || |
|
|
| T |
38306016 |
aatgcctgtgaaagaactctccatcacataacaaaccattttccaaaccaagatgagatttcaactgttcttgcaaaatgttgtccttaaatgagtcctc |
38305917 |
T |
 |
| Q |
501 |
taaagtgagagagaagatctttttctctattccccaatcactcaaaaa |
548 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
38305916 |
taaattgagagagaaaatctttttctctattccccaatcactcaaaaa |
38305869 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 545
Target Start/End: Complemental strand, 38317147 - 38316603
Alignment:
| Q |
1 |
aaaaaatacatgtttgaagtaggatgtgctgtgccattaatcatgttagcagtttcccttaaaggcaacaagaacgcacaaatcttttcaactcttttcc |
100 |
Q |
| |
|
|||||| ||| ||||||||||||||| | |||| ||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
38317147 |
aaaaaacacaagtttgaagtaggatgcgttgtgtcattaatcatgttggcagtttcataaaaaggcagcaagaacgcacaaatcttttcaactcttttcc |
38317048 |
T |
 |
| Q |
101 |
attcttctaccgaaggacataactcataattatcatcatacaagtgaagactttcaaacacacacctatatttaagagcactttcaagcatcaaataagt |
200 |
Q |
| |
|
| || | | | |||||||||||| |||||||||||||||||||||| ||||||||| ||| || |||||||||||||||||||||||||| |||||| |
|
|
| T |
38317047 |
actcatgtgctaaaggacataactggtaattatcatcatacaagtgaaaactttcaaatacatgccgatatttaagagcactttcaagcatcacataagt |
38316948 |
T |
 |
| Q |
201 |
tgagttcacagtcatagacatgtccagatgcaagcgaactgaactatcaacaccaccaaccttttcaacgcactccttaaatttttggcttcgactcttt |
300 |
Q |
| |
|
|||||||| | ||||||||||||||||||||| || ||| |||||||||||||||||||||||||||| |||||||||||||||| |||| | | ||| |
|
|
| T |
38316947 |
tgagttcagactcatagacatgtccagatgcaggcaaacagaactatcaacaccaccaaccttttcaatgcactccttaaattttgtccttctatttttt |
38316848 |
T |
 |
| Q |
301 |
gaatctctaaaaaacaagatgctctgtctaattttcgacacagcatcactaactagtttcaacccctcttcaacaatcaattttaaaagacgtgcataac |
400 |
Q |
| |
|
|||| || | ||||| |||||| | || |||| |||| ||| ||||||||||||| |||||||||||| |||||| |||||||| | |||| ||| |
|
|
| T |
38316847 |
gaattcctcacaaacatgatgctgtctcgaattccatacacggcaccactaactagttttaacccctcttcagcaatcagttttaaaacgcatgcaaaac |
38316748 |
T |
 |
| Q |
401 |
aatgcccgtgaaagaactctccatcacataacaacccattttgcaaaccaagttgagttttcaatagttcttgcaaaatgtcattatcagatgaatcatc |
500 |
Q |
| |
|
|||| | ||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||| ||||| ||| || | ||| ||| |||||||||| |
|
|
| T |
38316747 |
aatgagcatgaaagaactctccatcacataacaacccatttcgcaaacaaagttgatttttcaattgttctagcataacattattctcaaatgaatcatc |
38316648 |
T |
 |
| Q |
501 |
taaagtgagagagaagatctttttctctattccccaatcactcaa |
545 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
38316647 |
taaagtgagagagaaaatctttttctctattccccaatcattcaa |
38316603 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 545
Target Start/End: Complemental strand, 38309144 - 38308600
Alignment:
| Q |
1 |
aaaaaatacatgtttgaagtaggatgtgctgtgccattaatcatgttagcagtttcccttaaaggcaacaagaacgcacaaatcttttcaactcttttcc |
100 |
Q |
| |
|
|||||||||| ||| |||||| |||||| || ||||| ||| |||| |||||||| || |||||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
38309144 |
aaaaaatacaagttggaagtacgatgtgttgcaccatttatcgtgttggcagtttcgctaaaaggcaacaagaatgcacaaatcttttctactcttttcc |
38309045 |
T |
 |
| Q |
101 |
attcttctaccgaaggacataactcataattatcatcatacaagtgaagactttcaaacacacacctatatttaagagcactttcaagcatcaaataagt |
200 |
Q |
| |
|
| |||||| ||| ||||||| | |||||| ||| ||||||||||||||||||||||| || | ||||||||||||||||| ||||||||||||||| |
|
|
| T |
38309044 |
actcttctgccgcaggacatgaatcataaccatcgtcatacaagtgaagactttcaaatgcaagctgatatttaagagcactttgaagcatcaaataagt |
38308945 |
T |
 |
| Q |
201 |
tgagttcacagtcatagacatgtccagatgcaagcgaactgaactatcaacaccaccaaccttttcaacgcactccttaaatttttggcttcgactcttt |
300 |
Q |
| |
|
||||||||| ||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||| || |||||||| |
|
|
| T |
38308944 |
tgagttcactctcatagacatgtctagatgcaaacgaacagaactatcaacaccaccaaccttttcaatgcactccttaaatttttccctgtgactcttt |
38308845 |
T |
 |
| Q |
301 |
gaatctctaaaaaacaagatgctctgtctaattttcgacacagcatcactaactagtttcaacccctcttcaacaatcaattttaaaagacgtgcataac |
400 |
Q |
| |
|
|| || | ||||| |||||||| |||||| || |||| ||| ||||||||||||| |||||||||||||||||| |||||||| | ||||| ||| |
|
|
| T |
38308844 |
gatcgcctcacaaacatgatgctctttctaatcttatacacggcaccactaactagtttacacccctcttcaacaatcagttttaaaacatgtgcaaaac |
38308745 |
T |
 |
| Q |
401 |
aatgcccgtgaaagaactctccatcacataacaacccattttgcaaaccaagttgagttttcaatagttcttgcaaaatgtcattatcagatgaatcatc |
500 |
Q |
| |
|
|||| | |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||| ||||| || | ||| ||| |||||||||| |
|
|
| T |
38308744 |
aatgagcatgaaagaactctccatcacataacaacccattttccaaaccaagttgagtcttcaattgttgttgcagaacattattctcaaatgaatcatc |
38308645 |
T |
 |
| Q |
501 |
taaagtgagagagaagatctttttctctattccccaatcactcaa |
545 |
Q |
| |
|
|||||| | || || ||||||||||||| |||||||||| |||| |
|
|
| T |
38308644 |
taaagtaaatgaaaaaatctttttctctactccccaatcattcaa |
38308600 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 545
Target Start/End: Original strand, 38850198 - 38850742
Alignment:
| Q |
1 |
aaaaaatacatgtttgaagtaggatgtgctgtgccattaatcatgttagcagtttcccttaaaggcaacaagaacgcacaaatcttttcaactcttttcc |
100 |
Q |
| |
|
|||||||||| ||| ||||||||||||| ||||| |||||||||||| |||||||| | |||||||||| ||| |||||||||||||| |||||||||| |
|
|
| T |
38850198 |
aaaaaatacaagttggaagtaggatgtgttgtgctattaatcatgttggcagtttcacaaaaaggcaacaggaatgcacaaatcttttctactcttttcc |
38850297 |
T |
 |
| Q |
101 |
attcttctaccgaaggacataactcataattatcatcatacaagtgaagactttcaaacacacacctatatttaagagcactttcaagcatcaaataagt |
200 |
Q |
| |
|
| ||||| ||||||||||||| |||||| |||||||||||||||||| |||||||||| |||||| ||||||||||| |||||||||| || |||||| |
|
|
| T |
38850298 |
actcttccgccgaaggacataaatcataactatcatcatacaagtgaaaactttcaaacgcacaccggtatttaagagctctttcaagcaacatataagt |
38850397 |
T |
 |
| Q |
201 |
tgagttcacagtcatagacatgtccagatgcaagcgaactgaactatcaacaccaccaaccttttcaacgcactccttaaatttttggcttcgactcttt |
300 |
Q |
| |
|
||| ||| | ||||||| || |||| ||| ||| |||| |||||||||||||||||||||||||||| ||||||||||||||||| || | ||||||| |
|
|
| T |
38850398 |
tgaactcaaactcatagatatatccaaatgtaagtgaaccgaactatcaacaccaccaaccttttcaaagcactccttaaatttttccctcctactcttt |
38850497 |
T |
 |
| Q |
301 |
gaatctctaaaaaacaagatgctctgtctaattttcgacacagcatcactaactagtttcaacccctcttcaacaatcaattttaaaagacgtgcataac |
400 |
Q |
| |
|
|||| || | ||||| ||| |||| ||| || || |||| || ||||||||||| ||| | |||||||| ||| ||||||| |||||| ||| |
|
|
| T |
38850498 |
gaatgcctcacaaacatgatactctctctgatcttatgcacaccacagctaactagttttaacgcttcttcaactatctgatttaaaacgcgtgcaaaac |
38850597 |
T |
 |
| Q |
401 |
aatgcccgtgaaagaactctccatcacataacaacccattttgcaaaccaagttgagttttcaatagttcttgcaaaatgtcattatcagatgaatcatc |
500 |
Q |
| |
|
||| | | |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||| ||||| |||||||||||||| |
|
|
| T |
38850598 |
aattcacatgaaagaactctccatcacataacaaaccattttgcaaaacaagttgagttttcaattgttcttgcaaaatctcattctcagatgaatcatc |
38850697 |
T |
 |
| Q |
501 |
taaagtgagagagaagatctttttctctattccccaatcactcaa |
545 |
Q |
| |
|
| |||||||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
38850698 |
aatagtgagagagaaaatctttttctctattccccaatcattcaa |
38850742 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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