View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16999_high_15 (Length: 311)
Name: NF16999_high_15
Description: NF16999
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16999_high_15 |
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Alignment Details
Target: chr4 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 41424761 - 41425041
Alignment:
| Q |
1 |
tgtcatcaagaaatttacataattttggatgaaataaatttgaaatagttaccattgattctgtgaatatacatttatacaacgtagttattaattctga |
100 |
Q |
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| T |
41424761 |
tgtcatcaagaaatttacataattttgaatgaaataaatttgaaatagttaccattgattctgtgaatatacatttatacaatgtagttattaattctga |
41424860 |
T |
|
| Q |
101 |
tgaacttggtgataaattctaggcatgtacacaatgtggcttttgagaaatcagatttgttcttcatctgcatgctaaaaccactatcatatacgatcac |
200 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
41424861 |
tgaacttgatgataaattctaggcatgtacacaatgtggcttttgagaaatcagatttgttcttcatctgcatgctaaaaccactatcatctacgatcac |
41424960 |
T |
|
| Q |
201 |
tgtggatgatcttgaaattgatgcagcaaaatggatgccactcgttgagtttgtagagcaaccattaatacaagaagattc |
281 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
41424961 |
tgtggatgatcttgaaattgatgcagcaaaatggatgccactggttgagtttgtagagcaaccattaatacaagaagattc |
41425041 |
T |
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