View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1700-Insertion-12 (Length: 143)
Name: NF1700-Insertion-12
Description: NF1700
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1700-Insertion-12 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 116; Significance: 2e-59; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 116; E-Value: 2e-59
Query Start/End: Original strand, 8 - 143
Target Start/End: Original strand, 21148074 - 21148209
Alignment:
| Q |
8 |
catagcattcaaattgttcttttatttgctttttctcctttcatatggagtatggcattgcttatcttcatatgctaattttatgacctttatatttacc |
107 |
Q |
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| T |
21148074 |
catagcattcaaattgttcttttatttactttttctcctttcatatggagtatggcattgcttatcttcatatgctaattttacgacctttttatttacg |
21148173 |
T |
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| Q |
108 |
gattcgtgtcattgagagtgctacttgttctgatta |
143 |
Q |
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| T |
21148174 |
gattcgtgtcattgagggtgctacttgttctgatta |
21148209 |
T |
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