View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17002_high_33 (Length: 238)
Name: NF17002_high_33
Description: NF17002
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17002_high_33 |
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Alignment Details
Target: chr5 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 19300784 - 19301004
Alignment:
| Q |
1 |
ttcaaaatcatgattctggaaactagaaaagtatccaacttttgaagacttagcatcatttctgaaaaaaccatcacttgaatcgtctgattctactttt |
100 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |
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| T |
19300784 |
ttcaaaatcatgatcctggaaactagaaaagtatccaacttttgaagacttagcatcattcctgaaaaaaccatcacttgaatcatctgattctactttt |
19300883 |
T |
|
| Q |
101 |
ttaggaccataagtgaagtatccagaatccgaattatcagaaacataaccaatttcgaccgatttcatcttcccgtctttgttcagcttcttctcagcaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19300884 |
ttaggaccataagtgaagtatccagaatccgaattatcagaaacataaccaatttcgaccgatttcatcttcccgtctttgttcagcttcttctcagcaa |
19300983 |
T |
|
| Q |
201 |
gctcaaaaccattgtttttag |
221 |
Q |
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||||||||||||||||||||| |
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| T |
19300984 |
gctcaaaaccattgtttttag |
19301004 |
T |
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