View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17004_high_35 (Length: 309)
Name: NF17004_high_35
Description: NF17004
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17004_high_35 |
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Alignment Details
Target: chr6 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 2 - 301
Target Start/End: Complemental strand, 8073551 - 8073259
Alignment:
| Q |
2 |
agatattccattaagatggtataaagggaagatggaagtgcaagaaaagaggagatatgaactcctatggagtaggcaagtaggtgaatgagacattcaa |
101 |
Q |
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| T |
8073551 |
agatattccattaagatggtataaagggaagatggaagtgcaagaaaagaggagatatgaactcctatggagtgggcaagtaggtgaatgagacattcaa |
8073452 |
T |
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| Q |
102 |
acgtgtcgtggtaatttagacctcgaccgcaagataagtaaaatttgactaaaaataattctagcaaaactttgaatccaaatctctcaaaggatttgtc |
201 |
Q |
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| T |
8073451 |
aagtgtcatggtaatttagacctcgaccgtaagataagtaaaatttgactaaaaataattctagcaaaattttgaatccaaatctctcaaaggatttgtc |
8073352 |
T |
|
| Q |
202 |
attagctaagactcattaactgagtttgattatttagtcagtagtaatatatattagctagtacacctacaatgattaaaaactgcgatattagaataat |
301 |
Q |
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| T |
8073351 |
attagctaaaactcattaactaagtttgattatttagtcagtagtaatatatattagctagtacac-------gattaaaaactgcaatattagaataat |
8073259 |
T |
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