View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17006_low_1 (Length: 235)

Name: NF17006_low_1
Description: NF17006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17006_low_1
NF17006_low_1
[»] scaffold0031 (1 HSPs)
scaffold0031 (9-206)||(46272-46464)
[»] chr8 (49 HSPs)
chr8 (9-206)||(15961130-15961322)
chr8 (9-206)||(18997698-18997890)
chr8 (9-206)||(30473923-30474115)
chr8 (9-206)||(44832225-44832417)
chr8 (9-206)||(6299059-6299251)
chr8 (9-206)||(10477935-10478127)
chr8 (9-206)||(32110900-32111092)
chr8 (9-206)||(995854-996046)
chr8 (9-206)||(18175379-18175571)
chr8 (9-206)||(11725188-11725380)
chr8 (9-206)||(39257441-39257633)
chr8 (9-206)||(40026798-40026990)
chr8 (9-196)||(19240661-19240843)
chr8 (9-196)||(19313845-19314027)
chr8 (9-206)||(18841902-18842094)
chr8 (9-206)||(28274253-28274445)
chr8 (15-206)||(28582859-28583045)
chr8 (9-206)||(19412829-19413022)
chr8 (9-206)||(44836907-44837099)
chr8 (22-206)||(35122361-35122540)
chr8 (9-206)||(18568863-18569055)
chr8 (9-206)||(24408874-24409066)
chr8 (9-206)||(11142459-11142657)
chr8 (14-206)||(18210663-18210850)
chr8 (9-187)||(24004784-24004958)
chr8 (46-206)||(39997726-39997881)
chr8 (9-131)||(23353688-23353808)
chr8 (9-79)||(25875460-25875530)
chr8 (9-71)||(18481929-18481991)
chr8 (103-203)||(25875332-25875424)
chr8 (9-57)||(39997660-39997708)
chr8 (14-57)||(6299290-6299333)
chr8 (14-57)||(10477853-10477896)
chr8 (14-57)||(11142381-11142424)
chr8 (14-57)||(11725106-11725149)
chr8 (14-57)||(18175297-18175340)
chr8 (14-57)||(18997616-18997659)
chr8 (14-57)||(19240580-19240623)
chr8 (14-57)||(19313764-19313807)
chr8 (14-57)||(19412752-19412795)
chr8 (14-57)||(23353846-23353889)
chr8 (14-57)||(24408795-24408838)
chr8 (14-57)||(30474153-30474196)
chr8 (14-57)||(32111131-32111174)
chr8 (14-57)||(35122585-35122628)
chr8 (14-57)||(39997580-39997623)
chr8 (14-57)||(44832457-44832500)
chr8 (14-57)||(44836824-44836867)
chr8 (15-57)||(18210893-18210935)
[»] chr7 (35 HSPs)
chr7 (9-206)||(21804611-21804803)
chr7 (9-206)||(38163378-38163570)
chr7 (9-206)||(42242193-42242385)
chr7 (14-206)||(3840680-3840867)
chr7 (9-202)||(27138571-27138759)
chr7 (9-206)||(33916986-33917178)
chr7 (9-206)||(17178276-17178469)
chr7 (9-206)||(31373454-31373646)
chr7 (9-206)||(15109704-15109896)
chr7 (9-206)||(21341821-21342013)
chr7 (9-206)||(21669979-21670171)
chr7 (9-206)||(43933583-43933775)
chr7 (9-204)||(21656626-21656816)
chr7 (9-206)||(16376584-16376776)
chr7 (9-206)||(24924077-24924269)
chr7 (9-206)||(40968889-40969081)
chr7 (9-206)||(13786168-13786360)
chr7 (9-207)||(27903455-27903648)
chr7 (9-206)||(21753531-21753723)
chr7 (46-207)||(39030290-39030446)
chr7 (9-59)||(31096698-31096748)
chr7 (14-57)||(15109930-15109973)
chr7 (14-57)||(3840912-3840955)
chr7 (14-57)||(16376812-16376855)
chr7 (14-57)||(17178508-17178551)
chr7 (14-57)||(21341737-21341780)
chr7 (14-57)||(21656547-21656590)
chr7 (14-57)||(21669895-21669938)
chr7 (14-57)||(21804842-21804885)
chr7 (14-57)||(27138798-27138841)
chr7 (14-57)||(31373370-31373413)
chr7 (14-57)||(33917217-33917260)
chr7 (14-57)||(42242424-42242467)
chr7 (14-55)||(43933815-43933856)
chr7 (17-57)||(24924001-24924041)
[»] chr6 (25 HSPs)
chr6 (9-206)||(12597304-12597496)
chr6 (9-206)||(19997663-19997855)
chr6 (9-206)||(33645940-33646132)
chr6 (9-206)||(28099636-28099828)
chr6 (9-206)||(10584767-10584959)
chr6 (9-206)||(17202430-17202622)
chr6 (9-206)||(2266766-2266966)
chr6 (15-206)||(13533771-13533957)
chr6 (14-206)||(15044725-15044912)
chr6 (9-206)||(3592891-3593083)
chr6 (9-206)||(2005426-2005618)
chr6 (9-137)||(8539598-8539724)
chr6 (9-137)||(25448747-25448873)
chr6 (9-177)||(17594814-17594979)
chr6 (103-206)||(33035523-33035623)
chr6 (117-206)||(1405602-1405688)
chr6 (14-57)||(2266684-2266727)
chr6 (14-57)||(10584996-10585039)
chr6 (14-57)||(12597535-12597578)
chr6 (14-57)||(15044639-15044682)
chr6 (14-57)||(17202348-17202391)
chr6 (14-57)||(17594733-17594776)
chr6 (14-57)||(19997580-19997623)
chr6 (14-57)||(28099868-28099911)
chr6 (14-57)||(33645858-33645901)
[»] chr5 (39 HSPs)
chr5 (9-206)||(17373203-17373395)
chr5 (9-206)||(20874686-20874878)
chr5 (9-206)||(34107377-34107569)
chr5 (9-206)||(34110650-34110842)
chr5 (9-206)||(38246904-38247096)
chr5 (9-206)||(16526345-16526537)
chr5 (9-206)||(33570346-33570538)
chr5 (9-206)||(10729481-10729673)
chr5 (9-206)||(2398981-2399171)
chr5 (9-198)||(14141154-14141338)
chr5 (9-206)||(27647928-27648120)
chr5 (9-206)||(20655088-20655280)
chr5 (9-187)||(1394543-1394717)
chr5 (9-187)||(1395987-1396161)
chr5 (9-203)||(6940545-6940734)
chr5 (9-206)||(5479194-5479386)
chr5 (9-206)||(29275622-29275814)
chr5 (9-206)||(33375760-33375954)
chr5 (9-203)||(24223206-24223395)
chr5 (9-206)||(25099275-25099467)
chr5 (9-206)||(25158365-25158557)
chr5 (95-206)||(40177123-40177231)
chr5 (14-181)||(17913744-17913907)
chr5 (14-57)||(1395907-1395950)
chr5 (14-57)||(2399210-2399253)
chr5 (14-57)||(5479115-5479158)
chr5 (14-57)||(6940768-6940811)
chr5 (14-57)||(10729712-10729755)
chr5 (14-57)||(14141377-14141420)
chr5 (14-57)||(16526577-16526620)
chr5 (14-57)||(17373434-17373477)
chr5 (14-57)||(20874604-20874647)
chr5 (14-57)||(24223434-24223477)
chr5 (14-57)||(27647845-27647888)
chr5 (14-57)||(33570578-33570621)
chr5 (14-57)||(34107608-34107651)
chr5 (14-57)||(34110566-34110609)
chr5 (14-57)||(38247135-38247178)
chr5 (14-57)||(40177033-40177076)
[»] chr4 (39 HSPs)
chr4 (9-206)||(16917927-16918119)
chr4 (9-206)||(52434622-52434814)
chr4 (9-206)||(30824961-30825153)
chr4 (9-206)||(53143301-53143493)
chr4 (15-206)||(16904991-16905177)
chr4 (9-206)||(37651664-37651856)
chr4 (9-206)||(12090498-12090691)
chr4 (9-181)||(31966032-31966200)
chr4 (9-187)||(45977047-45977221)
chr4 (9-206)||(33139510-33139702)
chr4 (9-206)||(44376118-44376310)
chr4 (9-206)||(46256032-46256224)
chr4 (15-206)||(35760585-35760771)
chr4 (9-206)||(41387124-41387316)
chr4 (9-206)||(47142839-47143031)
chr4 (9-204)||(52098231-52098422)
chr4 (9-187)||(48118588-48118762)
chr4 (9-206)||(37590843-37591035)
chr4 (9-206)||(31628526-31628718)
chr4 (9-206)||(39058396-39058588)
chr4 (9-196)||(45782478-45782660)
chr4 (14-182)||(50229768-50229933)
chr4 (9-206)||(54624955-54625140)
chr4 (151-205)||(50229712-50229766)
chr4 (14-57)||(12090730-12090773)
chr4 (14-57)||(16905218-16905261)
chr4 (14-57)||(16918158-16918201)
chr4 (14-57)||(30825192-30825235)
chr4 (14-57)||(31966239-31966282)
chr4 (88-135)||(34684603-34684650)
chr4 (14-57)||(39058622-39058665)
chr4 (14-57)||(45977264-45977307)
chr4 (14-57)||(47143070-47143113)
chr4 (14-57)||(48118802-48118845)
chr4 (14-57)||(52098460-52098503)
chr4 (14-57)||(52434540-52434583)
chr4 (14-57)||(53143534-53143577)
chr4 (14-57)||(54624879-54624922)
chr4 (14-54)||(50229979-50230019)
[»] chr3 (39 HSPs)
chr3 (9-206)||(12264198-12264390)
chr3 (9-206)||(38653966-38654158)
chr3 (9-206)||(43363650-43363842)
chr3 (9-206)||(49672560-49672752)
chr3 (9-206)||(54073025-54073217)
chr3 (9-206)||(1941759-1941951)
chr3 (9-206)||(21098302-21098494)
chr3 (9-206)||(34121353-34121545)
chr3 (9-206)||(49506388-49506580)
chr3 (9-206)||(3898420-3898612)
chr3 (9-206)||(20671247-20671439)
chr3 (9-206)||(26948796-26948988)
chr3 (9-207)||(45557922-45558115)
chr3 (9-206)||(4584473-4584665)
chr3 (9-206)||(31488409-31488601)
chr3 (9-206)||(36076493-36076685)
chr3 (9-206)||(39146438-39146630)
chr3 (9-203)||(24119205-24119394)
chr3 (9-187)||(49478206-49478380)
chr3 (9-206)||(55041622-55041820)
chr3 (88-206)||(40014692-40014807)
chr3 (88-206)||(26051341-26051457)
chr3 (9-79)||(26052239-26052309)
chr3 (139-206)||(6460207-6460273)
chr3 (14-57)||(1941990-1942033)
chr3 (14-57)||(3898338-3898381)
chr3 (14-57)||(12264115-12264158)
chr3 (14-57)||(20671166-20671209)
chr3 (14-57)||(21098219-21098262)
chr3 (14-57)||(26052349-26052392)
chr3 (14-57)||(26948689-26948732)
chr3 (14-57)||(31488329-31488372)
chr3 (14-57)||(34121271-34121314)
chr3 (14-57)||(38654198-38654241)
chr3 (14-57)||(43363881-43363924)
chr3 (14-57)||(49478124-49478167)
chr3 (14-57)||(49672478-49672521)
chr3 (14-57)||(55041858-55041901)
chr3 (14-55)||(36076723-36076764)
[»] chr2 (27 HSPs)
chr2 (9-206)||(41663235-41663427)
chr2 (9-206)||(41664508-41664700)
chr2 (9-206)||(6120550-6120742)
chr2 (9-206)||(18351549-18351741)
chr2 (9-206)||(44902080-44902271)
chr2 (9-206)||(19596402-19596594)
chr2 (9-206)||(31424007-31424199)
chr2 (14-206)||(20544828-20545015)
chr2 (9-206)||(8700259-8700451)
chr2 (9-206)||(26231298-26231490)
chr2 (9-206)||(36279493-36279685)
chr2 (9-206)||(42441958-42442154)
chr2 (14-206)||(34007748-34007935)
chr2 (9-205)||(999271-999462)
chr2 (9-206)||(42055197-42055387)
chr2 (89-206)||(27944835-27944949)
chr2 (24-204)||(16214837-16215012)
chr2 (88-206)||(692241-692356)
chr2 (14-57)||(19596634-19596677)
chr2 (14-57)||(6120467-6120510)
chr2 (14-57)||(16214741-16214784)
chr2 (14-57)||(18351467-18351510)
chr2 (14-57)||(26231527-26231570)
chr2 (14-57)||(31423924-31423967)
chr2 (14-57)||(34007980-34008023)
chr2 (14-57)||(41663152-41663195)
chr2 (14-57)||(42441876-42441919)
[»] chr1 (35 HSPs)
chr1 (9-206)||(4266379-4266571)
chr1 (9-206)||(34888725-34888917)
chr1 (9-206)||(38913786-38913978)
chr1 (9-206)||(50151058-50151250)
chr1 (9-206)||(2951405-2951597)
chr1 (28-206)||(1231813-1231986)
chr1 (9-203)||(7333942-7334131)
chr1 (9-205)||(39727978-39728169)
chr1 (9-206)||(9216029-9216221)
chr1 (9-206)||(23482746-23482938)
chr1 (9-206)||(35614065-35614257)
chr1 (9-206)||(38444629-38444821)
chr1 (22-206)||(35614827-35615005)
chr1 (9-206)||(18706548-18706739)
chr1 (88-206)||(31018239-31018354)
chr1 (88-206)||(50326076-50326191)
chr1 (14-206)||(52687153-52687339)
chr1 (9-206)||(18855272-18855463)
chr1 (22-187)||(19764607-19764768)
chr1 (9-137)||(2590333-2590458)
chr1 (9-137)||(19768462-19768588)
chr1 (137-206)||(5061344-5061413)
chr1 (151-206)||(29942153-29942208)
chr1 (14-57)||(1231725-1231768)
chr1 (14-57)||(2951636-2951679)
chr1 (14-57)||(4266297-4266340)
chr1 (14-57)||(18706773-18706816)
chr1 (14-57)||(19764814-19764857)
chr1 (14-57)||(19768382-19768425)
chr1 (14-57)||(23482972-23483015)
chr1 (14-57)||(35613984-35614027)
chr1 (14-57)||(35614734-35614777)
chr1 (14-57)||(38914017-38914060)
chr1 (14-57)||(52036310-52036353)
chr1 (14-54)||(7333863-7333903)
[»] scaffold0022 (2 HSPs)
scaffold0022 (9-206)||(149089-149281)
scaffold0022 (14-57)||(149318-149361)
[»] scaffold0173 (1 HSPs)
scaffold0173 (9-206)||(19345-19537)
[»] scaffold0836 (1 HSPs)
scaffold0836 (90-206)||(5317-5430)
[»] scaffold0515 (1 HSPs)
scaffold0515 (90-206)||(6100-6213)
[»] scaffold0306 (1 HSPs)
scaffold0306 (90-206)||(6110-6223)


Alignment Details
Target: scaffold0031 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 46272 - 46464
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  46272 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 46369  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  46370 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 46464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 128; Significance: 3e-66; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 15961130 - 15961322
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  15961130 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 15961227  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  15961228 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 15961322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 18997698 - 18997890
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  18997698 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 18997795  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  18997796 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 18997890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 30474115 - 30473923
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  30474115 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 30474018  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  30474017 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 30473923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 44832417 - 44832225
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  44832417 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 44832320  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  44832319 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 44832225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 6299251 - 6299059
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  6299251 ccaataatataatattgacatataattttaacaaaggaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 6299154  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  6299153 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 6299059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 10477935 - 10478127
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  10477935 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 10478032  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   |||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  10478033 aggttcgaattccaacatctgcata---tatttgtgaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 10478127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 32111092 - 32110900
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  32111092 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 32110995  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  32110994 aggttcgaattccaacatctgcata---tatttggaaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 32110900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 996046 - 995854
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||        |||||| ||||||||||||||    
T  996046 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatat--ttttttggtgaataagcgtggtgtctg 995949  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||| ||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  995948 aggttcgaattccaacatatgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 995854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 18175379 - 18175571
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||        |||||| ||| ||||||||||    
T  18175379 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgtttgataataattaatat--ttttttggtgaataagtgtggtgtctg 18175476  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  18175477 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 18175571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 11725188 - 11725380
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  11725188 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 11725285  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   |||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  11725286 aggttcgaattccaacatctgcata---tatttgagaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactacatctacaat 11725380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 39257441 - 39257633
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  39257441 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 39257538  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||| ||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  39257539 aggttcaaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactacatctacaat 39257633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 40026798 - 40026990
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  40026798 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 40026895  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||| ||||||||||||||||||   ||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||| |||||||||    
T  40026896 aggttcaaattccaacatctgcata---tatttgggaccacatatttcattatctttgatatgcattgagatttg-tttttgtctactacatctacaat 40026990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 19240661 - 19240843
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||         ||||| ||| ||||||||||    
T  19240661 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaac--gtgaataagtgtggtgtctg 19240758  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctacta 196  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  19240759 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctacta 19240843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 19313845 - 19314027
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||         ||||| ||| ||||||||||    
T  19313845 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaac--gtgaataagtgtggtgtctg 19313942  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctacta 196  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  19313943 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctacta 19314027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 18841902 - 18842094
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||        |||||| ||| ||||||||||    
T  18841902 ccaataatataacattgacatataattttaacaaaagaatgaagtaacatacaattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 18841999  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    || ||||||||||||||||||||||   ||||| ||||||||||||||||||| ||||||||||||||||||||  ||||||||||||| |||||||||    
T  18842000 agattcgaattccaacatctgcata---tattttggaccacatatttcattctctttgatatgcattgagattt-atttttgtctactacatctacaat 18842094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 28274445 - 28274253
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||| ||||||| ||    
T  28274445 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtatg 28274348  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||| ||   ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||| |||||||||    
T  28274347 aggttcgaattccaacatctgcgta---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctgctacatctacaat 28274253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 15 - 206
Target Start/End: Original strand, 28582859 - 28583045
Alignment:
Q  15 atataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctgaggttc 114  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||| ||||||||||||||||    
T  28582859 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctgaggttc 28582956  T
Q  115 gaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||   |||||| |||||||||||||||||| |||||||| |||||||||||| ||||| ||||||| |||||||||    
T  28582957 gaattccaacatctgcata---tatttgagaccacatatttcattctctttgatatacattgagatttg-tttttatctactacatctacaat 28583045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 19412829 - 19413022
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaa-gaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtct 107  Q
    |||| ||||||| ||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||        |||||| ||  |||||||||    
T  19412829 ccaataatataacattgacatataattttaacaaaaagaatgaagtaacacacgatggataaaaattaatat--ttttaaggtgaataactgtggtgtct 19412926  T
Q  108 gaggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  19412927 gaggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactacatctacaat 19413022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 44836907 - 44837099
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||| ||||||||||||||    
T  44836907 ccaataatttaacattgagatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatat--ttttaaggtgaataagcgtggtgtctg 44837004  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||| ||||||||||||| ||||| ||||||||| ||||||||||  ||||||||||||| |||||||||    
T  44837005 aggttcgaattccaacatctgcata---tatttaggaccacatattttattctctttgatatgtattgagattt-atttttgtctactacatctacaat 44837099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 22 - 206
Target Start/End: Complemental strand, 35122540 - 35122361
Alignment:
Q  22 attgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctgaggttcgaattcc 121  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||        |||||| ||| |||||||||||| ||||||||||    
T  35122540 attgacatataattttaataaaagaatgaagtaacacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctgagattcgaattcc 35122443  T
Q  122 aacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    ||||||||||||   ||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  35122442 aacatctgcata---tattttggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactacatctacaat 35122361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 18568863 - 18569055
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        | |||| ||| ||||||| ||    
T  18568863 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttaagatgaataagtgtggtgtttg 18568960  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||| ||||| |||||||||||||||||| || ||||||||||| | |||||||||    
T  18568961 aggttcgaattccaacatctgcata---tatttgggaccacatattttattctctttgatatgcattgagatatg-tttttgtctacaacatctacaat 18569055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 24408874 - 24409066
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||| ||||||| ||    
T  24408874 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtatg 24408971  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    | |||||||||||||||||||||||   ||||||||||||||||||||||| | ||||||||||||| ||||||| ||||| ||||||| |||||||||    
T  24408972 atgttcgaattccaacatctgcata---tatttgggaccacatatttcattatctttgatatgcattaagatttg-tttttatctactacatctacaat 24409066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 11142459 - 11142657
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatat----annnnnnnggtgaacaagcgtggtg 104  Q
    |||| ||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||| || ||    |       |||||| ||| ||||||    
T  11142459 ccaataatataacactgacatataattttaacaaaagaatgaagtaacacacgattgataaaaataaaaattaatatttttaaggtgaataagtgtggtg 11142558  T
Q  105 tctgaggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctac 203  Q
    |||||||||||||||||||||||||||||   ||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||    
T  11142559 tctgaggttcgaattccaacatctgcata---tatttgggagcacatatttcattctctttgatatgcattgagatttg-tttttgtctactacatctac 11142654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 206
Target Start/End: Complemental strand, 18210850 - 18210663
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctgaggtt 113  Q
    ||||||| |||||||||||| ||||||||||||| ||| |||||||| ||||||||||||||||||        |||||| ||| |||||||||||||||    
T  18210850 aatataacattgacatataactttaacaaaagaaggaaataacacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctgaggtt 18210753  T
Q  114 cgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    | ||||||||||||||||||   |||||| |||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  18210752 caaattccaacatctgcata---tatttgagaccacatatttcattctctttgatatgcattgagattt-atttttgtctactatatctacaat 18210663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 24004958 - 24004784
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||        |||||| ||| ||||||||||    
T  24004958 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacatgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 24004861  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttt 187  Q
    ||||||||||| |||||||||||||   ||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||    
T  24004860 aggttcgaatttcaacatctgcata---tatttgggaccacatgttttattctctttgatatgcattgagatttgatttt 24004784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 46 - 206
Target Start/End: Original strand, 39997726 - 39997881
Alignment:
Q  46 aatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctgaggttcgaattccaacatctgcatatattatttggga 145  Q
    ||||||||||||||| ||||||||||||||||||        |||||| ||| |||||||||||||||||||||||||||||||||||   ||||||| |    
T  39997726 aatgaagtaacacacgattgataaaaattaatat--tttaaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcata---tatttggaa 39997820  T
Q  146 ccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||| |||||||| |||||||||||| ||||||||||||| |||||||||    
T  39997821 ccacatatttcattctctttgatatacattgagatttg-tttttgtctactacatctacaat 39997881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 131
Target Start/End: Complemental strand, 23353808 - 23353688
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||| | ||||||||    
T  23353808 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatat--ttttaaggtgaataagtggggtgtctg 23353711  T
Q  109 aggttcgaattccaacatctgca 131  Q
    |||||||||||||||||||||||    
T  23353710 aggttcgaattccaacatctgca 23353688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 25875530 - 25875460
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatat 79  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  25875530 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatat 25875460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 18481991 - 18481929
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaa 71  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  18481991 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaa 18481929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 203
Target Start/End: Complemental strand, 25875424 - 25875332
Alignment:
Q  103 tgtctgaggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatct 201  Q
    |||||||||||||||||||| ||||||||||        |||| ||||| ||| ||||| ||| |||||||||||||||||| |||||||||||||||||    
T  25875424 tgtctgaggttcgaattccagcatctgcata--------gggagcacatgttttattctctttaatatgcattgagatttgt-ttttgtctactatatct 25875334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 39997660 - 39997708
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    |||| ||||||| |||||||||||||||| |||||||||||||||||||    
T  39997660 ccaataatataacattgacatataatttttacaaaagaatgaagtaaca 39997708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 6299333 - 6299290
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  6299333 aatataacattaacatataatttttacaaaagaatgaagtaaca 6299290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 10477853 - 10477896
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  10477853 aatataacattaacatataatttttacaaaagaatgaagtaaca 10477896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 11142381 - 11142424
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  11142381 aatataacattaacatataatttttacaaaagaatgaagtaaca 11142424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 11725106 - 11725149
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  11725106 aatataacattaacatataatttttacaaaagaatgaagtaaca 11725149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 18175297 - 18175340
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  18175297 aatataacattaacatataatttttacaaaagaatgaagtaaca 18175340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 18997616 - 18997659
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  18997616 aatataacattaacatataatttttacaaaagaatgaagtaaca 18997659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 19240580 - 19240623
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19240580 aatataacattaacatataatttttacaaaagaatgaagtaaca 19240623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 19313764 - 19313807
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19313764 aatataacattaacatataatttttacaaaagaatgaagtaaca 19313807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 19412752 - 19412795
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19412752 aatataacattaacatataatttttacaaaagaatgaagtaaca 19412795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 23353889 - 23353846
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  23353889 aatataacattaacatataatttttacaaaagaatgaagtaaca 23353846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 24408795 - 24408838
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  24408795 aatataacattaacatataatttttacaaaagaatgaagtaaca 24408838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 30474196 - 30474153
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  30474196 aatataacattaacatataatttttacaaaagaatgaagtaaca 30474153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 32111174 - 32111131
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  32111174 aatataacattaacatataatttttacaaaagaatgaagtaaca 32111131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 35122628 - 35122585
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  35122628 aatataacattaacatataatttttacaaaagaatgaagtaaca 35122585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 39997580 - 39997623
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  39997580 aatataacattaacatataatttttacaaaagaatgaagtaaca 39997623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 44832500 - 44832457
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  44832500 aatataacattaacatataatttttacaaaagaatgaagtaaca 44832457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 44836824 - 44836867
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  44836824 aatataacattaacatataatttttacaaaagaatgaagtaaca 44836867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 18210935 - 18210893
Alignment:
Q  15 atataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    |||||| ||| |||||||||||| |||||||||||||||||||    
T  18210935 atataacattaacatataatttttacaaaagaatgaagtaaca 18210893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 128; Significance: 3e-66; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 21804803 - 21804611
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  21804803 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 21804706  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  21804705 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 21804611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 38163570 - 38163378
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  38163570 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 38163473  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  38163472 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 38163378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 42242385 - 42242193
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  42242385 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 42242288  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  42242287 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 42242193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 14 - 206
Target Start/End: Complemental strand, 3840867 - 3840680
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctgaggtt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| |||||||||||||||||||    
T  3840867 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctgaggtt 3840770  T
Q  114 cgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    ||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  3840769 cgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 3840680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 9 - 202
Target Start/End: Complemental strand, 27138759 - 27138571
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  27138759 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 27138662  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatcta 202  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  27138661 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatcta 27138571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 33917178 - 33916986
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  33917178 ccaataatataatattgacatataattttaacaaaagaatgaaataacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 33917081  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  33917080 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 33916986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 17178469 - 17178276
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||        |||||| ||| ||||||||||    
T  17178469 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacccgattgataaaaattaatat-tttttttggtgaataagtgtggtgtctg 17178371  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||    
T  17178370 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgaattgagatttg-tttttgtctactatatctacaat 17178276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 31373454 - 31373646
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||        |||||| ||||||||||||||    
T  31373454 ccaataatataatattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 31373551  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    ||||||||||| |||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||    
T  31373552 aggttcgaatttcaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctattatatctacaat 31373646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 15109896 - 15109704
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||         | |||| ||| ||||||||||    
T  15109896 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaata--cttttaagatgaataagtgtggtgtctg 15109799  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  15109798 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactacatctacaat 15109704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 21341821 - 21342013
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  21341821 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 21341918  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   |||||| ||| |||||||||||||| ||||||||||||||||||||  |||||||||| ||||||||||||    
T  21341919 aggttcgaattccaacatctgcata---tatttgagactacatatttcattctctttgatatgcattgagattt-atttttgtctattatatctacaat 21342013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 21669979 - 21670171
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  21669979 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 21670076  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  21670077 aggttcgaattccaacatctgcata---tatttgggaccacatattttattctctttgatatgcattgagatttg-tttttgtctactacatctacaat 21670171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 43933775 - 43933583
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  43933775 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 43933678  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||| ||||| ||| |||||||||||||||| |||||||||||||| |||||||||    
T  43933677 aggttcgaattccaacatctgcata---tatttgggaccacatattttattctcttttatatgcattgagattt-ttttttgtctactacatctacaat 43933583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 204
Target Start/End: Original strand, 21656626 - 21656816
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  21656626 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 21656723  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctaca 204  Q
    |||||||||||||||||||||||||   ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||  |||||||    
T  21656724 aggttcgaattccaacatctgcata---tatttgggaccacatattttattctctttgatatgcattgagatttg-tttttgtctacttcatctaca 21656816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 16376776 - 16376584
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  16376776 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 16376679  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  16376678 aggttcgaattccaacatctgcata---tatttgggaccacatgttttattctctttgatatgcattgagatttg-tttttgtctactacatctacaat 16376584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 24924077 - 24924269
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||        |||||| ||| ||||||||||    
T  24924077 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaatttaatat--ttttaaggtgaataagtgtggtgtctg 24924174  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||| ||||||||||||| ||||   ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  24924175 aggttcaaattccaacatctacata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactacatctacaat 24924269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 40968889 - 40969081
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  40968889 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 40968986  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||| ||| ||||| ||||||||||||||||||||| ||| ||||||||| |||||||||    
T  40968987 aggttcgaattccaacatctgcata---tatttgggaccacatgttttattctctttgatatgcattgagatttg-tttgtgtctactacatctacaat 40969081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 13786168 - 13786360
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||| |||||||||| || | ||||||||||||||||||        |||||| ||| ||||||||||    
T  13786168 ccaataatataacattgacatataattttaacaaaaaaatgaagtaagacgcgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 13786265  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  13786266 aggttcgaattccaacatctgcata---tatttgggaccacatgttttattctctttgatatgcattgagatttg-tttttgtctactacatctacaat 13786360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 207
Target Start/End: Complemental strand, 27903648 - 27903455
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||| |||||||||||||||||||||||| |||| |||| |||||||||||||        |||||| ||| ||||||| ||    
T  27903648 ccaataatataacattgacatagaattttaacaaaagaatgaagtaagacacgattggtaaaaattaatat--ttttaaggtgaataagtgtggtgtatg 27903551  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaata 207  Q
    |||||||||||||||||||||||||   ||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  27903550 aggttcgaattccaacatctgcata---tatttgggaccacatgttttattctctttgatatgcattgagatttg-tttttgtctactacatctacaata 27903455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 21753723 - 21753531
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||        |||||| ||| |||||||||     
T  21753723 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtcta 21753626  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||  ||||||||||||   |||||| |||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  21753625 aggttcgaattttaacatctgcata---tatttgagaccacatgttttattctctttgatatgcattgagatttg-tttttgtctactacatctacaat 21753531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 46 - 207
Target Start/End: Complemental strand, 39030446 - 39030290
Alignment:
Q  46 aatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctgaggttcgaattccaacatctgcatatattatttggga 145  Q
    |||||||||| |||| ||||||||||||||||||        |||||| ||| |||||||||||||||||||||||||||||||||||   |||||||||    
T  39030446 aatgaagtaagacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcata---tatttggga 39030352  T
Q  146 ccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaata 207  Q
    |||||| ||| ||||| ||||||||||||||| ||||| ||||||||||||| ||||||||||    
T  39030351 ccacatgttttattctctttgatatgcattgaaatttg-tttttgtctactacatctacaata 39030290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 31096698 - 31096748
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacaca 59  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31096698 ccaataatataatattgacatataattttaacaaaagaatgaagtaacaca 31096748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 15109973 - 15109930
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  15109973 aatataatattaacatataatttttacaaaagaatgaagtaaca 15109930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 3840955 - 3840912
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  3840955 aatataacattaacatataatttttacaaaagaatgaagtaaca 3840912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 16376855 - 16376812
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| |||||||||||||||| |||||| ||||||||||||    
T  16376855 aatataacattgacatataatttttacaaaataatgaagtaaca 16376812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 17178551 - 17178508
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  17178551 aatataacattaacatataatttttacaaaagaatgaagtaaca 17178508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 21341737 - 21341780
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21341737 aatataacattaacatataatttttacaaaagaatgaagtaaca 21341780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 21656547 - 21656590
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21656547 aatataacattaacatataatttttacaaaagaatgaagtaaca 21656590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 21669895 - 21669938
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21669895 aatataacattaacatataatttttacaaaagaatgaagtaaca 21669938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 21804885 - 21804842
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21804885 aatataacattaacatataatttttacaaaagaatgaagtaaca 21804842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 27138841 - 27138798
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  27138841 aatataacattaacatataatttttacaaaagaatgaagtaaca 27138798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 31373370 - 31373413
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  31373370 aatataacattaacatataatttttacaaaagaatgaagtaaca 31373413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 33917260 - 33917217
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  33917260 aatataacattaacatataatttttacaaaagaatgaagtaaca 33917217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 42242467 - 42242424
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  42242467 aatataacattaacatataatttttacaaaagaatgaagtaaca 42242424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 43933856 - 43933815
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaa 55  Q
    ||||||| ||| |||||||||||| |||||||||||||||||    
T  43933856 aatataacattaacatataatttttacaaaagaatgaagtaa 43933815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 24924001 - 24924041
Alignment:
Q  17 ataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    |||| ||| |||||||||||| |||||||||||||||||||    
T  24924001 ataacattaacatataatttttacaaaagaatgaagtaaca 24924041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 128; Significance: 3e-66; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 12597496 - 12597304
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  12597496 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 12597399  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  12597398 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 12597304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 19997663 - 19997855
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  19997663 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 19997760  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  19997761 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 19997855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 33645940 - 33646132
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  33645940 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 33646037  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  33646038 aggttcgaattccaacatctgcata---tatttggaaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 33646132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 28099828 - 28099636
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  28099828 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 28099731  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    ||||||||||||||||||| |||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||    
T  28099730 aggttcgaattccaacatcagcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctattatatctacaat 28099636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 10584959 - 10584767
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||| || |||||||    
T  10584959 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttaaggtgaataagtgtagtgtctg 10584862  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||| |||||||||    
T  10584861 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattaagatttg-tttttgtctactacatctacaat 10584767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 17202430 - 17202622
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  17202430 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 17202527  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| |||||||||||||| |||||| | ||||||||||| |||||||||    
T  17202528 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgtgatttg-tatttgtctactacatctacaat 17202622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 2266766 - 2266966
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtg------- 101  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| |||||||           
T  2266766 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtcgt 2266863  T
Q  102 -gtgtctgaggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatat 199  Q
     ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  2266864 ggtgtctgaggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatat 2266959  T
Q  200 ctacaat 206  Q
    |||||||    
T  2266960 ctacaat 2266966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 15 - 206
Target Start/End: Original strand, 13533771 - 13533957
Alignment:
Q  15 atataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctgaggttc 114  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||| ||||||||||||||||    
T  13533771 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctgaggttc 13533868  T
Q  115 gaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||   ||||||||||||||||||||||||| |||||||| |||||||||||| ||||| ||||||| |||||||||    
T  13533869 gaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatacattgagatttg-tttttatctactacatctacaat 13533957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 14 - 206
Target Start/End: Original strand, 15044725 - 15044912
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctgaggtt 113  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||        |||||| ||| |||||||||||||||    
T  15044725 aatataacattgacatataattttaacaaaagaatgaagtaaaacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctgaggtt 15044822  T
Q  114 cgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    ||||||||||||||||||||   ||||||||||||||||||| ||||| ||||||||||||||| ||||  ||||||||||||| |||||||||    
T  15044823 cgaattccaacatctgcata---tatttgggaccacatattttattctctttgatatgcattgaaattt-atttttgtctactacatctacaat 15044912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 3592891 - 3593083
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||        |||||| ||| ||||||||||    
T  3592891 ccaataatataacattgagatataattttaacaaaagaatgaagtaacacacgattcataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 3592988  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    ||||||||||||||||||||| |||   ||||||||| ||||||||||||||| || |||||||||||||||||| ||||||||||||| |||||||||    
T  3592989 aggttcgaattccaacatctgaata---tatttgggatcacatatttcattctcttggatatgcattgagatttg-tttttgtctactacatctacaat 3593083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 2005426 - 2005618
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  2005426 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 2005523  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||||||   |  |||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||  |||||||||    
T  2005524 aggttcgaattccaacatctgcatatatt---taagaccacatgttttattctctttgatatgcattgagatttg-tttttgtctactgcatctacaat 2005618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 8539598 - 8539724
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  8539598 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 8539695  T
Q  109 aggttcgaattccaacatctgcatatatt 137  Q
    |||||||||||||||||||||||||||||    
T  8539696 aggttcgaattccaacatctgcatatatt 8539724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 25448747 - 25448873
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||       |||||| ||||||||||||||    
T  25448747 ccaataatataatattgacatataattttaacaaaaaaatgaagtaacacacgattgataaaaattaatata--tttttggtgaataagcgtggtgtctg 25448844  T
Q  109 aggttcgaattccaacatctgcatatatt 137  Q
    || ||||||||||||||||| ||||||||    
T  25448845 agtttcgaattccaacatctacatatatt 25448873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 177
Target Start/End: Original strand, 17594814 - 17594979
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||| | |||       |||||| ||| ||||||||||    
T  17594814 ccaataatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaattta-atatttttaaggtgaataagtgtggtgtctg 17594912  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgag 177  Q
    | ||| ||||| |||||||| ||||   ||||||||||||||||||||||| | ||||||||||||||||    
T  17594913 aagtttgaatttcaacatctccata---tatttgggaccacatatttcattttctttgatatgcattgag 17594979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 103 - 206
Target Start/End: Original strand, 33035523 - 33035623
Alignment:
Q  103 tgtctgaggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatct 201  Q
    |||||||| ||||||||||| ||||||||||   |||||| |||||||| ||| ||||| ||||| ||||||||||||||| ||||||||||||| ||||    
T  33035523 tgtctgagattcgaattccagcatctgcata---tatttgagaccacatgttttattctctttgacatgcattgagatttg-tttttgtctactacatct 33035618  T
Q  202 acaat 206  Q
    |||||    
T  33035619 acaat 33035623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 206
Target Start/End: Complemental strand, 1405688 - 1405602
Alignment:
Q  117 attccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||   ||||| ||||||||||||||| ||| |||| |||||||||||| ||||| ||||||| |||||||||    
T  1405688 attccaacatctgcatatatt---tgggatcacatatttcattctctttaatatacattgagatttg-tttttatctactacatctacaat 1405602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 2266684 - 2266727
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  2266684 aatataacattaacatataatttttacaaaagaatgaagtaaca 2266727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 10585039 - 10584996
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  10585039 aatataacattaacatataatttttacaaaagaatgaagtaaca 10584996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 12597578 - 12597535
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  12597578 aatataacattaacatataatttttacaaaagaatgaagtaaca 12597535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 15044639 - 15044682
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  15044639 aatataacattaacatataatttttacaaaagaatgaagtaaca 15044682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 17202348 - 17202391
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  17202348 aatataacattaacatataatttttacaaaagaatgaagtaaca 17202391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 17594733 - 17594776
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  17594733 aatataacattaacatataatttttacaaaagaatgaagtaaca 17594776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 19997580 - 19997623
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19997580 aatataacattaacatataatttttacaaaagaatgaagtaaca 19997623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 28099911 - 28099868
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  28099911 aatataacattaacatataatttttacaaaagaatgaagtaaca 28099868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 33645858 - 33645901
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  33645858 aatataacattaacatataatttttacaaaagaatgaagtaaca 33645901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 3e-66; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 17373395 - 17373203
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  17373395 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 17373298  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  17373297 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 17373203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 20874686 - 20874878
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  20874686 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 20874783  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  20874784 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 20874878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 34107569 - 34107377
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  34107569 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 34107472  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  34107471 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 34107377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 34110650 - 34110842
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  34110650 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 34110747  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  34110748 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 34110842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 38247096 - 38246904
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  38247096 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 38246999  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  38246998 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 38246904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 16526537 - 16526345
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  16526537 ccaataatataatattgacatataattttaacaaaagaacgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 16526440  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  16526439 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 16526345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 33570538 - 33570346
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  33570538 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 33570441  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||    
T  33570440 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttggtatgcattgagatttg-tttttgtctactatatctacaat 33570346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 10729673 - 10729481
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||        |||||| ||||||||||||||    
T  10729673 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatat--ttttttggtgaataagcgtggtgtctg 10729576  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||    
T  10729575 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctcttggatatgcattgagatttg-tttttgtctactatatctacaat 10729481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 2399171 - 2398981
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||        |||||| ||||||||||||||    
T  2399171 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacg--attgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 2399076  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  2399075 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 2398981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 9 - 198
Target Start/End: Complemental strand, 14141338 - 14141154
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  14141338 ccaataatataatattggcatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 14141241  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactata 198  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  14141240 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactata 14141154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 27647928 - 27648120
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  27647928 ccaacaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 27648025  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    ||||||||||||||||||||| |||   ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  27648026 aggttcgaattccaacatctgtata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactacatctacaat 27648120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 20655280 - 20655088
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||| ||| ||||||||||    
T  20655280 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacaattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 20655183  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  20655182 aggttcgaattccaacatctgcata---tatttgggaccacatgttttattctctttgatatgcattgagatttg-tttttgtctactacatctacaat 20655088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 1394717 - 1394543
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||        |||||||||| ||||||| ||    
T  1394717 ccaataatataacattgacatataaatttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttaaggtgaacaagtgtggtgtttg 1394620  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttt 187  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1394619 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttgttttt 1394543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 1395987 - 1396161
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||        |||||| ||| ||||||||||    
T  1395987 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgactgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 1396084  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttt 187  Q
    ||||||||||||||||||||||| |   ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1396085 aggttcgaattccaacatctgcaga---tatttgggaccacatatttcattctctttgatatgcattgagatttgttttt 1396161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 9 - 203
Target Start/End: Complemental strand, 6940734 - 6940545
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| |||||||  ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||        |||||| ||| ||||||| ||    
T  6940734 ccaataatataacgttgacatataattttaacaaaagaatgaagtaacatacgattgataaaaattaatat--ttttcaggtgaataagtgtggtgtatg 6940637  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctac 203  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||    
T  6940636 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactacatctac 6940545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 5479194 - 5479386
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||| || |||||||    
T  5479194 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttaaggtgaataagtgtagtgtctg 5479291  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||| ||||   ||||||||| ||||||||||||||| ||||||||||||||||||||  ||||||||||||| |||||||||    
T  5479292 aggttcgaattccaacatctacata---tatttgggatcacatatttcattctctttgatatgcattgagattt-atttttgtctactacatctacaat 5479386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 29275622 - 29275814
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||        |||||| ||| ||||||||||    
T  29275622 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatat--ttttaaggtgaataagtgtggtgtctg 29275719  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||||| || |||||||||    
T  29275720 aggttcgaattccaacatctgcata---tatttgggaccacatgtttcattctctttgatatgcattgaaatttg-tttttgtctattacatctacaat 29275814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 33375760 - 33375954
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  33375760 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 33375857  T
Q  109 aggttcgaattccaacatctgcatatattatttggg--accacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaa 205  Q
    |||||||||||||||||||||||||   ||||||||  ||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||| ||||||||    
T  33375858 aggttcgaattccaacatctgcata---tatttgggacaccacatgttttattctctttgatatgcattgagatttg-tttttgtctactacatctacaa 33375953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 203
Target Start/End: Complemental strand, 24223395 - 24223206
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||| | ||||||||||| ||||||||||||||||||||||||||| |||| |||| | ||||||        |||||| ||| ||||||||||    
T  24223395 ccaataatatcacattgacatatacttttaacaaaagaatgaagtaacacacgattggtaaagagtaatat--ttttaaggtgaataagtgtggtgtctg 24223298  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctac 203  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| ||||||    
T  24223297 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttcatatgcattgagatttg-tttttgtctactacatctac 24223206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 25099467 - 25099275
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||        || ||| ||| |||||| |||    
T  25099467 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatat--ttttaaggcgaataagtgtggtgcctg 25099370  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   |||||| |||||||| ||| ||||| ||||||||||||| ||||||| ||||||||||||| |||||||||    
T  25099369 aggttcgaattccaacatctgcata---tatttgtgaccacatgttttattctctttgatatgcattcagatttg-tttttgtctactacatctacaat 25099275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 25158557 - 25158365
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||        || ||| ||| |||||| |||    
T  25158557 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatat--ttttaaggcgaataagtgtggtgcctg 25158460  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   |||||| |||||||| ||| ||||| ||||||||||||| ||||||| ||||||||||||| |||||||||    
T  25158459 aggttcgaattccaacatctgcata---tatttgtgaccacatgttttattctctttgatatgcattcagatttg-tttttgtctactacatctacaat 25158365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 95 - 206
Target Start/End: Original strand, 40177123 - 40177231
Alignment:
Q  95 aagcgtggtgtctgaggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtcta 193  Q
    |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||    
T  40177123 aagcgtggtgtctgaggttcgaattccaacatctgcata---tatttgggaccacatatttcattctcttttatatgcattgagatttg-tttttgtcta 40177218  T
Q  194 ctatatctacaat 206  Q
    |||||||||||||    
T  40177219 ctatatctacaat 40177231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 17913744 - 17913907
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctgaggtt 113  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||        |||||| ||| ||||| | |||||||    
T  17913744 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaagattaatat--ttttaaggtgaataagtgtggtatttgaggtt 17913841  T
Q  114 cgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagattt 181  Q
    ||||||||||||||| ||||   ||||||||||||||| ||| ||||| ||||||||||||||||||||    
T  17913842 cgaattccaacatctacata---tatttgggaccacatgttttattctctttgatatgcattgagattt 17913907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 1395907 - 1395950
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  1395907 aatataacattaacatataatttttacaaaagaatgaagtaaca 1395950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 2399253 - 2399210
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  2399253 aatataacattaacatataatttttacaaaagaatgaagtaaca 2399210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 5479115 - 5479158
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  5479115 aatataacattaacatataatttttacaaaagaatgaagtaaca 5479158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 6940811 - 6940768
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  6940811 aatataacattaacatataatttttacaaaagaatgaagtaaca 6940768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 10729755 - 10729712
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  10729755 aatataacattaacatataatttttacaaaagaatgaagtaaca 10729712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 14141420 - 14141377
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  14141420 aatataacattaacatataatttttacaaaagaatgaagtaaca 14141377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 16526620 - 16526577
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  16526620 aatataacattaacatataatttttacaaaagaatgaagtaaca 16526577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 17373477 - 17373434
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  17373477 aatataacattaacatataatttttacaaaagaatgaagtaaca 17373434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 20874604 - 20874647
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  20874604 aatataacattaacatataatttttacaaaagaatgaagtaaca 20874647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 24223477 - 24223434
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  24223477 aatataacattaacatataatttttacaaaagaatgaagtaaca 24223434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 27647845 - 27647888
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  27647845 aatataacattaacatataatttttacaaaagaatgaagtaaca 27647888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 33570621 - 33570578
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  33570621 aatataacattaacatataatttttacaaaagaatgaagtaaca 33570578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 34107651 - 34107608
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  34107651 aatataacattaacatataatttttacaaaagaatgaagtaaca 34107608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 34110566 - 34110609
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  34110566 aatataacattaacatataatttttacaaaagaatgaagtaaca 34110609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 38247178 - 38247135
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  38247178 aatataacattaacatataatttttacaaaagaatgaagtaaca 38247135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 40177033 - 40177076
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  40177033 aatataacattaacatataatttttacaaaagaatgaagtaaca 40177076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 3e-66; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 16918119 - 16917927
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  16918119 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 16918022  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  16918021 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 16917927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 52434622 - 52434814
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  52434622 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 52434719  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  52434720 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 52434814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 30825153 - 30824961
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  30825153 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 30825056  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  30825055 aggttcgaattccaacatctgcata---tatttggaaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 30824961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 53143493 - 53143301
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  53143493 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 53143396  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||    
T  53143395 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctattatatctacaat 53143301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 15 - 206
Target Start/End: Complemental strand, 16905177 - 16904991
Alignment:
Q  15 atataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctgaggttc 114  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||| ||| ||||||||||||||||    
T  16905177 atataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctgaggttc 16905080  T
Q  115 gaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  16905079 gaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactacatctacaat 16904991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 37651664 - 37651856
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||| ||    
T  37651664 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtttg 37651761  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   |||||| |||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||    
T  37651762 aggttcgaattccaacatctgcata---tatttgagaccacatatttcattctctttcatatgcattgagatttg-tttttgtctactatatctacaat 37651856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 12090691 - 12090498
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaa-tgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtct 107  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||        | |||| |||||||||||||    
T  12090691 ccaataatataatattgacatataattttaacaaaagaaatgaagtaacacacgattgataaaaattaatat--tttttggttgaataagcgtggtgtct 12090594  T
Q  108 gaggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    ||||||||||||||||||||| ||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  12090593 gaggttcgaattccaacatctacata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 12090498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 181
Target Start/End: Complemental strand, 31966200 - 31966032
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  31966200 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 31966103  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagattt 181  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||    
T  31966102 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagattt 31966032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 45977221 - 45977047
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||| ||| ||||||||||    
T  45977221 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 45977124  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttt 187  Q
    |||||||||||||||||||||||||   ||||| ||||||||||||||||||| ||||||||||||||| |||| |||||    
T  45977123 aggttcgaattccaacatctgcata---tatttaggaccacatatttcattctctttgatatgcattgatatttattttt 45977047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 33139702 - 33139510
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||        |||||| ||  ||||||||||    
T  33139702 ccaataatataacattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatat--ttttaaggtgaataaatgtggtgtctg 33139605  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   |||||||||| |||||||| ||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  33139604 aggttcgaattccaacatctgcata---tatttgggacaacatatttaattctctttgatatgcattgagatttg-tttttgtctactaaatctacaat 33139510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 44376310 - 44376118
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  44376310 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 44376213  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   |||||| |||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  44376212 aggttcgaattccaacatctgcata---tatttgtgaccacatgttttattctctttgatatgcattgagatttg-tttttgtctactacatctacaat 44376118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 46256032 - 46256224
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| | || ||||||||||||||||||        |||||| ||| ||||||||||    
T  46256032 ccaataatataacattgacatataattttaacaaaagaatgaagtaagatacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 46256129  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||| ||||||||||||||||||   ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  46256130 aggttccaattccaacatctgcata---tatttgggaccacatattttattctctttgatatgcattgagatttg-tttttgtctactacatctacaat 46256224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 206
Target Start/End: Original strand, 35760585 - 35760771
Alignment:
Q  15 atataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctgaggttc 114  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||  ||||||| ||||||||    
T  35760585 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttaaggtgaataattgtggtgtttgaggttc 35760682  T
Q  115 gaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||   ||||||||||||||||||||||||| |||||||| |||||||||||  ||||| |||||||||||||||||    
T  35760683 gaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatacattgagattt-atttttatctactatatctacaat 35760771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 41387124 - 41387316
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||| || |||||||||||||||        |||||| ||| ||||||||||    
T  41387124 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgatcgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 41387221  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    ||||||||||| || ||||||||||   ||||||||||||||| ||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  41387222 aggttcgaatttcagcatctgcata---tatttgggaccacatgttttattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 41387316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 47143031 - 47142839
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||| ||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||        |||||| |||| |||||||||    
T  47143031 ccaataatttaacattgagatataattttaacaaaagaatgaagtaacacacaatcgataaaaattaatat--ttttaaggtgaataagcatggtgtctg 47142934  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||| ||||||||||||   |||||| |||||||||| ||||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  47142933 aggttcgaattctaacatctgcata---tatttgagaccacatatgtcattctctttgatatgcattgagatttg-tttttgtctactacatctacaat 47142839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 204
Target Start/End: Complemental strand, 52098422 - 52098231
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||       |||||| ||| || |||||||    
T  52098422 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattta-atatttttaaggtgaataagtgttgtgtctg 52098324  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctaca 204  Q
    | ||| |||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||| ||||    
T  52098323 aagtttgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagattt-atttttgtctactatatttaca 52098231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 48118762 - 48118588
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||        |||||| | | ||||||| ||    
T  48118762 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattggtaaaaattaatat--ttttaaggtgaatacgtgtggtgtttg 48118665  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttt 187  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  48118664 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttattttt 48118588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 37591035 - 37590843
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||        |||||| ||| ||||||||||    
T  37591035 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacatgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 37590938  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    ||||||||||| |||||||||||||   ||||||||||||||| ||| ||||| |||||||||||||||||||||  |||||||||||| |||||||||    
T  37590937 aggttcgaatttcaacatctgcata---tatttgggaccacatgttttattctctttgatatgcattgagatttg-attttgtctactacatctacaat 37590843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 31628718 - 31628526
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||        | |||| ||| ||||||| ||    
T  31628718 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatat--ttttaagatgaataagtgtggtgtatg 31628621  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   |||||| |||||||||||| ||||| |||||||||||||||||| || ||||||||||| | |||||||||    
T  31628620 aggttcgaattccaacatctgcata---tatttgagaccacatatttaattctctttgatatgcattgagatatg-tttttgtctacaacatctacaat 31628526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 39058588 - 39058396
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||        |||||| ||| ||||| ||||    
T  39058588 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacatgattgataaaaattaatat--ttttaaggtgaataagtgtggtatctg 39058491  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    ||||||||||||||||||||  |||   ||||||||||||||||||||||||| ||||||||  ||| | ||||| |||||||||||||||||||||||    
T  39058490 aggttcgaattccaacatcttgata---tatttgggaccacatatttcattctctttgatatatattaaaatttg-tttttgtctactatatctacaat 39058396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 196
Target Start/End: Complemental strand, 45782660 - 45782478
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  45782660 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 45782563  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctacta 196  Q
    |||||| ||||||||||||| ||||   ||||| ||||||||||||||||||| ||||||||  ||||||||||  |||||||||||||    
T  45782562 aggttcaaattccaacatcttcata---tatttaggaccacatatttcattctctttgatatatattgagattt-atttttgtctacta 45782478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 14 - 182
Target Start/End: Complemental strand, 50229933 - 50229768
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaa-ttaatatannnnnnnggtgaacaagcgtggtgtctgaggt 112  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||        |||||| |||  |||||||||||||    
T  50229933 aatataacattgacatataattttaacaaaagaatgaagtaacacactattgataaaaaattaatat--ttttaaggtgaataagtatggtgtctgaggt 50229836  T
Q  113 tcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttg 182  Q
    |||||||||||||||||||||   ||||| ||||||||| ||||||||| |||||||||||||||||||||    
T  50229835 tcgaattccaacatctgcata---tattttggaccacatgtttcattctctttgatatgcattgagatttg 50229768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 54624955 - 54625140
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||||||||||||||| |||||||||||||      ||||||||||||||||        |||||| ||| ||||||||||    
T  54624955 ccaataatataacattgacatataattttaacaaa-gaatgaagtaaca------tgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 54625045  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||  ||||||||    
T  54625046 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattaagatttg-tttttgtctactacgtctacaat 54625140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 50229766 - 50229712
Alignment:
Q  151 tatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaa 205  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||    
T  50229766 tatttcattctctttgatatgcattgagattt-ttttttgtctactacatctacaa 50229712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 12090773 - 12090730
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  12090773 aatataacattaacatataatttttacaaaagaatgaagtaaca 12090730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 16905261 - 16905218
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  16905261 aatataacattaacatataatttttacaaaagaatgaagtaaca 16905218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 16918201 - 16918158
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  16918201 aatataacattaacatataatttttacaaaagaatgaagtaaca 16918158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 30825235 - 30825192
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  30825235 aatataacattaacatataatttttacaaaagaatgaagtaaca 30825192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 31966282 - 31966239
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  31966282 aatataacattaacatataatttttacaaaagaatgaagtaaca 31966239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 135
Target Start/End: Complemental strand, 34684650 - 34684603
Alignment:
Q  88 ggtgaacaagcgtggtgtctgaggttcgaattccaacatctgcatata 135  Q
    |||||| ||| | |||||||||||||||||||||||| ||||||||||    
T  34684650 ggtgaataagtggggtgtctgaggttcgaattccaacctctgcatata 34684603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 39058665 - 39058622
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  39058665 aatataacattaacatataatttttacaaaagaatgaagtaaca 39058622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 45977307 - 45977264
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  45977307 aatataacattaacatataatttttacaaaagaatgaagtaaca 45977264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 47143113 - 47143070
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  47143113 aatataacattaacatataatttttacaaaagaatgaagtaaca 47143070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 48118845 - 48118802
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  48118845 aatataacattaacatataatttttacaaaagaatgaagtaaca 48118802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 52098503 - 52098460
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  52098503 aatataacattaacatataatttttacaaaagaatgaagtaaca 52098460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 52434540 - 52434583
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  52434540 aatataacattaacatataatttttacaaaagaatgaagtaaca 52434583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 53143577 - 53143534
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  53143577 aatataacattaacatataatttttacaaaagaatgaagtaaca 53143534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 54624879 - 54624922
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  54624879 aatataacattaacatataatttttacaaaagaatgaagtaaca 54624922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 50230019 - 50229979
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagta 54  Q
    ||||||| ||| |||||||||||| ||||||||||||||||    
T  50230019 aatataacattaacatataatttttacaaaagaatgaagta 50229979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 3e-66; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 12264198 - 12264390
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  12264198 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 12264295  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  12264296 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 12264390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 38654158 - 38653966
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  38654158 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 38654061  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  38654060 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 38653966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 43363842 - 43363650
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  43363842 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 43363745  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  43363744 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 43363650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 49672560 - 49672752
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  49672560 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 49672657  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  49672658 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 49672752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 54073025 - 54073217
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  54073025 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 54073122  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  54073123 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 54073217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 1941951 - 1941759
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||| ||||||    
T  1941951 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtgatgtctg 1941854  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  1941853 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 1941759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 21098302 - 21098494
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  21098302 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 21098399  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||    
T  21098400 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctattatatctacaat 21098494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 34121353 - 34121545
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  34121353 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 34121450  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  34121451 aggttcgaattccaacatctgcata---tatttgggaccacgtatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 34121545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 49506580 - 49506388
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  49506580 ccaataatataatattgacatataattttaacaaaagaatgaagtaccacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 49506483  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  49506482 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 49506388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 3898420 - 3898612
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  3898420 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 3898517  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||| ||||||||||||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||    
T  3898518 aggttcaaattccaacatctgcata---tatttgggaccacatatttcattctctttaatatgcattgagatttg-tttttgtctactatatctacaat 3898612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 20671247 - 20671439
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  20671247 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 20671344  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  20671345 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactacatctacaat 20671439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 26948796 - 26948988
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||        |||||| ||| ||||||||||    
T  26948796 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatat--ttttaaggtgaataagtgtggtgtctg 26948893  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  26948894 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactacatctacaat 26948988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 9 - 207
Target Start/End: Complemental strand, 45558115 - 45557922
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  45558115 ccaataatataatattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 45558018  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaata 207  Q
    ||||||||||| |||||||||||||   || |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  45558017 aggttcgaatttcaacatctgcata---tacttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactacatctacaata 45557922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 4584665 - 4584473
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  4584665 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 4584568  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||| ||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  4584567 aggttcaaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactacatctacaat 4584473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 31488409 - 31488601
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  31488409 ccaataatataacattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 31488506  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   |||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  31488507 aggttcgaattccaacatctgcata---tatttgggacaacatatttcattctctttgatatgcattgagatttg-tttttgtctactacatctacaat 31488601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 36076685 - 36076493
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  36076685 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 36076588  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    | |||||||||||||||||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| |||||||||    
T  36076587 aagttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttaatatgcattgagatttg-tttttgtctactacatctacaat 36076493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 39146438 - 39146630
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  39146438 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 39146535  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||| ||||| ||||||||||||||||||||  ||||||||||||| |||||||||    
T  39146536 aggttcgaattccaacatctgcata---tatttgggaccacatattttattctctttgatatgcattgagattt-atttttgtctactacatctacaat 39146630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 203
Target Start/End: Original strand, 24119205 - 24119394
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  24119205 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 24119302  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctac 203  Q
    ||||| |||||||||||||||||||   |||||||||||| |||||||||| | ||| ||||||||||||||||| ||||||||||||| ||||||    
T  24119303 aggtttgaattccaacatctgcata---tatttgggaccatatatttcattatctttaatatgcattgagatttg-tttttgtctactacatctac 24119394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 49478206 - 49478380
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  49478206 ccaataatataacattgacatataattttaataaaagaatgaagtaacacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 49478303  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttt 187  Q
    |||||||||||||||||| ||||||   ||||||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  49478304 aggttcgaattccaacatttgcata---tatttgggaccacatatttcattatctttgatatgtattgagatttgttttt 49478380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 55041820 - 55041622
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatat----annnnnnnggtgaacaagcgtggtg 104  Q
    |||| ||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||| || ||    |       |||||| ||| ||||||    
T  55041820 ccaataatataacattgacatataattttaacaaaagagtgaagtaacacacgattgataaaaataaaaattaatatttttaaggtgaataagtgtggtg 55041721  T
Q  105 tctgaggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctac 203  Q
    |||||||||||||||| ||||||||||||   ||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||    
T  55041720 tctgaggttcgaattcaaacatctgcata---tatttggaaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactacatctac 55041625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 40014807 - 40014692
Alignment:
Q  88 ggtgaacaagcgtggtgtctgaggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgtttt 186  Q
    |||||| |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  40014807 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-ttt 40014712  T
Q  187 ttgtctactatatctacaat 206  Q
    |||| || ||||||||||||    
T  40014711 ttgtttattatatctacaat 40014692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 26051457 - 26051341
Alignment:
Q  88 ggtgaacaagcgtggtgtctgaggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgtttt 186  Q
    |||||| |||||||||||||||||||||||||||||| || ||||||||  || |||||||||||||||||||| ||||||||||||||||||||| |||    
T  26051457 ggtgaataagcgtggtgtctgaggttcgaattccaacctcagcatatat--ttggggaccacatatttcattctctttgatatgcattgagatttg-ttt 26051361  T
Q  187 ttgtctactatatctacaat 206  Q
    |||||||||| |||||||||    
T  26051360 ttgtctactacatctacaat 26051341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 26052309 - 26052239
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatat 79  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26052309 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat 26052239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 6460273 - 6460207
Alignment:
Q  139 tttgggaccacatatttcattcttttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    ||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||||    
T  6460273 tttgggaccacatattttattcttttgatatgtattgagatttgt-ttttgtctactacatctacaat 6460207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 1942033 - 1941990
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  1942033 aatataacattaacatataatttttacaaaagaatgaagtaaca 1941990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 3898338 - 3898381
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  3898338 aatataacattaacatataatttttacaaaagaatgaagtaaca 3898381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 12264115 - 12264158
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  12264115 aatataacattaacatataatttttacaaaagaatgaagtaaca 12264158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 20671166 - 20671209
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  20671166 aatataacattaacatataatttttacaaaagaatgaagtaaca 20671209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 21098219 - 21098262
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21098219 aatataacattaacatataatttttacaaaagaatgaagtaaca 21098262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 26052392 - 26052349
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  26052392 aatataacattaacatataatttttacaaaagaatgaagtaaca 26052349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 26948689 - 26948732
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  26948689 aatataacattaacatataatttttacaaaagaatgaagtaaca 26948732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 31488329 - 31488372
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  31488329 aatataacattaacatataatttttacaaaagaatgaagtaaca 31488372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 34121271 - 34121314
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  34121271 aatataacattaacatataatttttacaaaagaatgaagtaaca 34121314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 38654241 - 38654198
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  38654241 aatataacattaacatataatttttacaaaagaatgaagtaaca 38654198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 43363924 - 43363881
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  43363924 aatataacattaacatataatttttacaaaagaatgaagtaaca 43363881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 49478124 - 49478167
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  49478124 aatataacattaacatataatttttacaaaagaatgaagtaaca 49478167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 49672478 - 49672521
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  49672478 aatataacattaacatataatttttacaaaagaatgaagtaaca 49672521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 55041901 - 55041858
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  55041901 aatataacattaacatataatttttacaaaagaatgaagtaaca 55041858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 36076764 - 36076723
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaa 55  Q
    ||||||| ||| |||||||||||| |||||||||||||||||    
T  36076764 aatataacattaacatataatttttacaaaagaatgaagtaa 36076723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 3e-66; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 41663235 - 41663427
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  41663235 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 41663332  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  41663333 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 41663427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 41664508 - 41664700
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  41664508 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 41664605  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  41664606 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 41664700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 6120550 - 6120742
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  6120550 ccaataatataatattgacatatagttttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 6120647  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  6120648 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 6120742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 18351549 - 18351741
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||| ||    
T  18351549 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtttg 18351646  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  18351647 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 18351741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 44902080 - 44902271
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||   ||        ||||| ||||||||||||||    
T  44902080 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaatta---tattttttttgtgaataagcgtggtgtctg 44902176  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  44902177 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 44902271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 19596594 - 19596402
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||| ||||||||||||||    
T  19596594 ccaataatttaacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatat--ttttaaggtgaataagcgtggtgtctg 19596497  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| |||||||||    
T  19596496 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttaatatgcattgagatttg-tttttgtctactacatctacaat 19596402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 31424007 - 31424199
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||| ||| ||||||| ||    
T  31424007 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatat--ttttaaggtgaataagtgtggtgtatg 31424104  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||| ||||   ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  31424105 aggttcgaattccaacatctacata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactacatctacaat 31424199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 14 - 206
Target Start/End: Original strand, 20544828 - 20545015
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctgaggtt 113  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||        |||||| ||||||||||| | |||||    
T  20544828 aatataatattgacatataattttaacaaaagaatgaagtaccacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgttttaggtt 20544925  T
Q  114 cgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    ||||||| ||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||    
T  20544926 cgaattctaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctaccatatctacaat 20545015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 8700259 - 8700451
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||  ||||||| ||    
T  8700259 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttaaggtgaaaaaatgtggtgtatg 8700356  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||| |||||||||    
T  8700357 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgaaatttg-tttttgtctactacatctacaat 8700451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 26231490 - 26231298
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        | |||| ||| ||||||||||    
T  26231490 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttaagatgaataagtgtggtgtctg 26231393  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    ||||||||||||||||||||| |||   |||||| |||||||||||||||||| ||||||||||||||| ||||| ||||||||||||| |||||||||    
T  26231392 aggttcgaattccaacatctgaata---tatttgagaccacatatttcattctctttgatatgcattgaaatttg-tttttgtctactacatctacaat 26231298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 36279685 - 36279493
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||| ||||| ||||    
T  36279685 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtatctg 36279588  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    || ||||||||||||||||||||||   ||||||||||||||||||||||||| |||||||| |||||| ||||| ||||||||||||| |||||||||    
T  36279587 agattcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatacattgatatttg-tttttgtctactacatctacaat 36279493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 42441958 - 42442154
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||        |||||| ||||||||||||||    
T  42441958 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacg--attgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 42442053  T
Q  109 aggttcg------aattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatct 201  Q
    |||||||      ||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  42442054 aggttcgaattcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatct 42442149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 14 - 206
Target Start/End: Complemental strand, 34007935 - 34007748
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctgaggtt 113  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||        |||| | ||| |||||||||||||||    
T  34007935 aatataacattgacatataattttaacaaaagaatgaagtaacacacgatttataaaaattaatat--ttttaaggtggataagtgtggtgtctgaggtt 34007838  T
Q  114 cgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||| |||||   |||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  34007837 cgaattccaacatcggcata---tatttgggactacatatttcattctctttgatatgcattgagatttg-tttttgtctactacatctacaat 34007748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 999462 - 999271
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  999462 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 999365  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaa 205  Q
    |||||||||||||||||||| ||||   ||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||| ||||||| ||||||||    
T  999364 aggttcgaattccaacatctacata---tatttgggaccacatgttttattctctttgatatgcattgagatttg-tttttatctactacatctacaa 999271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 42055197 - 42055387
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||  || ||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  42055197 ccaataatataacattgacata--atcttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 42055292  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||| ||| ||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  42055293 aggttcgaattccaacatctgcata---tatttgggatcacctatttcattctctttgatatgcattgagatttg-tttttgtctactacatctacaat 42055387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 27944949 - 27944835
Alignment:
Q  89 gtgaacaagcgtggtgtctgaggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttt 187  Q
    ||||| |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  27944949 gtgaataagcgtggtgtctgaggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttt 27944854  T
Q  188 tgtctactatatctacaat 206  Q
    |||||||||||||||||||    
T  27944853 tgtctactatatctacaat 27944835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 24 - 204
Target Start/End: Original strand, 16214837 - 16215012
Alignment:
Q  24 tgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctgaggttcgaattccaa 123  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||        |||||| ||| |||||||  |||||||||||||| |    
T  16214837 tgacatataattttaacaaaagaatgaagtaacacacgattaataaaaattaatat--ttttaaggtgaataagtgtggtgttagaggttcgaattccta 16214934  T
Q  124 catctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctaca 204  Q
    ||| ||||||   ||||| ||||||||||||||||||| ||||||||||||||||||||  ||||||||||||| |||||||    
T  16214935 catttgcata---tattttggaccacatatttcattctctttgatatgcattgagattt-atttttgtctactacatctaca 16215012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 692356 - 692241
Alignment:
Q  88 ggtgaacaagcgtggtgtctgaggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgtttt 186  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||   |||||||||||| |||||||||||| ||||||||||||||||||||| |||    
T  692356 ggtgaataagtgtggtgtctgaggttcgaattccaacatctgcata---tatttgggaccatatatttcattctctttgatatgcattgagatttg-ttt 692261  T
Q  187 ttgtctactatatctacaat 206  Q
    |||||||||| || ||||||    
T  692260 ttgtctactacatttacaat 692241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 19596677 - 19596634
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||    
T  19596677 aatataacattaacatataattttaacaaaagaatgaagtaaca 19596634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 6120467 - 6120510
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  6120467 aatataacattaacatataatttttacaaaagaatgaagtaaca 6120510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 16214741 - 16214784
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  16214741 aatataacattaacatataatttttacaaaagaatgaagtaaca 16214784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 18351467 - 18351510
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  18351467 aatataacattaacatataatttttacaaaagaatgaagtaaca 18351510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 26231570 - 26231527
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  26231570 aatataacattaacatataatttttacaaaagaatgaagtaaca 26231527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 31423924 - 31423967
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  31423924 aatataacattaacatataatttttacaaaagaatgaagtaaca 31423967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 34008023 - 34007980
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  34008023 aatataacattaacatataatttttacaaaagaatgaagtaaca 34007980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 41663152 - 41663195
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  41663152 aatataacattaacatataatttttacaaaagaatgaagtaaca 41663195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 42441876 - 42441919
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  42441876 aatataacattaacatataatttttacaaaagaatgaagtaaca 42441919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 3e-66; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 4266379 - 4266571
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  4266379 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 4266476  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  4266477 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 4266571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 34888917 - 34888725
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  34888917 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 34888820  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  34888819 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 34888725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 38913978 - 38913786
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  38913978 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 38913881  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  38913880 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 38913786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 50151058 - 50151250
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  50151058 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 50151155  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  50151156 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 50151250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 2951597 - 2951405
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||||||||||||||    
T  2951597 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctg 2951500  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||| |||||||||||||||||||| |||||||| || ||||| ||||||    
T  2951499 aggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagattt-ttttttgtttattatatttacaat 2951405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 28 - 206
Target Start/End: Original strand, 1231813 - 1231986
Alignment:
Q  28 atataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctgaggttcgaattccaacatc 127  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| |||||||||||||||||||||||||||||||||    
T  1231813 atataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttttggtgaataagcgtggtgtctgaggttcgaattccaacatc 1231910  T
Q  128 tgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    ||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||    
T  1231911 tgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatttacaat 1231986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 9 - 203
Target Start/End: Original strand, 7333942 - 7334131
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  7333942 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttatggtgaataagtgtggtgtctg 7334039  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctac 203  Q
    ||||| |||||||||||||||||||   ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| ||||||    
T  7334040 aggtttgaattccaacatctgcata---tatttgggaccacatattttattctctttgatatgcattgagatttg-tttttgtctactacatctac 7334131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 39727978 - 39728169
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  39727978 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 39728075  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaa 205  Q
    |||||||||||||||||||||||||   ||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||| ||||||||    
T  39728076 aggttcgaattccaacatctgcata---tatttgggaccacatgttttattctctttgatatgcattgagatttg-tttttgtctactacatctacaa 39728169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 9216029 - 9216221
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||        ||| || ||| ||||||||||    
T  9216029 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatat--ttttaaggtaaataagtgtggtgtctg 9216126  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||| |||||||||||||||||    
T  9216127 aggttcgaattccaacatctgcata---tatttgggaccacatgttttattctctttgatatgcattgagatttg-tttttatctactatatctacaat 9216221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 23482938 - 23482746
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| |||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||| ||||||| ||    
T  23482938 ccaataatataacgttgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttcaggtgaataagtgtggtgtatg 23482841  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   |||||||||||||||||||||| || ||||||||||||||||||||| | ||||||||||| |||||||||    
T  23482840 aggttcgaattccaacatctgcata---tatttgggaccacatatttcatgctctttgatatgcattgagatttg-tatttgtctactacatctacaat 23482746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 35614065 - 35614257
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||| |||||||||     
T  35614065 ccaataatatgacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttcaggtgaataagtgtggtgtctt 35614162  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    | |||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| || ||||||    
T  35614163 aagttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactacatttacaat 35614257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 38444629 - 38444821
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||        |||||| ||| ||||||||||    
T  38444629 ccaataatataacattgacatataattttatcaaaagaatgaagtaacacattattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 38444726  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    | ||||||||| |||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  38444727 aagttcgaatttcaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactacatctacaat 38444821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 22 - 206
Target Start/End: Original strand, 35614827 - 35615005
Alignment:
Q  22 attgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctgaggttcgaattcc 121  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        ||| || ||| |||||||||||||||||||||||    
T  35614827 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat---tttaaggtaaataagtgtggtgtctgaggttcgaattcc 35614923  T
Q  122 aacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    ||||||||||||   |||||| |||||||||||||||||| ||||||||||||| ||||||| ||||||||||||| || ||||||    
T  35614924 aacatctgcata---tatttgagaccacatatttcattctctttgatatgcattaagatttg-tttttgtctactacatttacaat 35615005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 18706739 - 18706548
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| |||||||  ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||        |||||| ||| ||||||| ||    
T  18706739 ccaataatataacgttgacatataattttaacaaaagaatgaagttacacacgattgataaaaattaatat--ttttcaggtgaataagtgtggtgtatg 18706642  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||||    || ||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||| |||||||||    
T  18706641 aggttcgaattccaacatctgcatata----tttggaccacatatttcattctctttgatatgcattaagatttg-tttttgtctactacatctacaat 18706548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 31018354 - 31018239
Alignment:
Q  88 ggtgaacaagcgtggtgtctgaggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgtttt 186  Q
    |||||| |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  31018354 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-ttt 31018259  T
Q  187 ttgtctactatatctacaat 206  Q
    ||||||||||||||||||||    
T  31018258 ttgtctactatatctacaat 31018239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 50326076 - 50326191
Alignment:
Q  88 ggtgaacaagcgtggtgtctgaggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgtttt 186  Q
    |||||| |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  50326076 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-ttt 50326171  T
Q  187 ttgtctactatatctacaat 206  Q
    ||||||||||||||||||||    
T  50326172 ttgtctactatatctacaat 50326191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 206
Target Start/End: Complemental strand, 52687339 - 52687153
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctgaggtt 113  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||        |||||| ||| ||||||| |||||||    
T  52687339 aatataacattgacatataattttaataaaaaaatgaagtaacacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgt-tgaggtt 52687243  T
Q  114 cgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    || |||||||||||||||||   ||||||||||||||||||||||||| ||| ||| ||||||||||||| ||||||| ||||| |||||||||    
T  52687242 cggattccaacatctgcata---tatttgggaccacatatttcattctctttcataggcattgagatttg-tttttgtatactacatctacaat 52687153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 18855463 - 18855272
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||        |||||| ||| ||||||||||    
T  18855463 ccaataatataacattgacatataattttaacaaaagaatgaagtaatacatgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 18855366  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    ||||||||||| |||||||| ||||   ||||||||||||||| ||| ||||| |||||||||||||||||||||   ||||||||||  |||||||||    
T  18855365 aggttcgaatttcaacatctacata---tatttgggaccacatgttttattctctttgatatgcattgagatttg--atttgtctactgcatctacaat 18855272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 187
Target Start/End: Complemental strand, 19764768 - 19764607
Alignment:
Q  22 attgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctgaggttcgaattcc 121  Q
    |||||||| |||||||||||||| ||||||||||||||| ||| ||||||||||||||        |||||| ||| ||||||||||||||||||||||     
T  19764768 attgacatgtaattttaacaaaataatgaagtaacacacgattcataaaaattaatat--ttttaaggtgaataagtgtggtgtctgaggttcgaattca 19764671  T
Q  122 aacatctgcatatattatttgggaccacatatttcattc-ttttgatatgcattgagatttgttttt 187  Q
    ||||| ||||||   |||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  19764670 aacatttgcata---tatttgggaccacatatttcattctttttaatatgcattgagatttgttttt 19764607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 2590333 - 2590458
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  2590333 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 2590430  T
Q  109 aggttcgaattccaacatctgcatatatt 137  Q
    ||||| |||||| ||||||||||||||||    
T  2590431 aggtt-gaattcgaacatctgcatatatt 2590458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 19768462 - 19768588
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||        | |||| ||| ||||||||||    
T  19768462 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatat--ttttaagatgaataagtgtggtgtctg 19768559  T
Q  109 aggttcgaattccaacatctgcatatatt 137  Q
    ||||||||| | |||||||| ||| ||||    
T  19768560 aggttcgaaattcaacatctacatgtatt 19768588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 206
Target Start/End: Original strand, 5061344 - 5061413
Alignment:
Q  137 tatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  5061344 tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactacatctacaat 5061413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 29942153 - 29942208
Alignment:
Q  151 tatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  29942153 tatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 29942208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 1231725 - 1231768
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  1231725 aatataacattaacatataatttttacaaaagaatgaagtaaca 1231768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 2951679 - 2951636
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  2951679 aatataacattaacatataatttttacaaaagaatgaagtaaca 2951636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 4266297 - 4266340
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  4266297 aatataacattaacatataatttttacaaaagaatgaagtaaca 4266340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 18706816 - 18706773
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  18706816 aatataacattaacatataatttttacaaaagaatgaagtaaca 18706773  T

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Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 19764857 - 19764814
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19764857 aatataacattaacatataatttttacaaaagaatgaagtaaca 19764814  T

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Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 19768382 - 19768425
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19768382 aatataacattaacatataatttttacaaaagaatgaagtaaca 19768425  T

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Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 23483015 - 23482972
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  23483015 aatataacattaacatataatttttacaaaagaatgaagtaaca 23482972  T

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Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 35613984 - 35614027
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  35613984 aatataaaattaacatataatttttacaaaagaatgaagtaaca 35614027  T

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Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 35614734 - 35614777
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  35614734 aatataacattaacatataatttttacaaaagaatgaagtaaca 35614777  T

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Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 38914060 - 38914017
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  38914060 aatataacattaacatataatttttacaaaagaatgaagtaaca 38914017  T

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Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 52036353 - 52036310
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  52036353 aatataacattaacatataatttttacaaaagaatgaagtaaca 52036310  T

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Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 7333863 - 7333903
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagta 54  Q
    ||||||| ||| |||||||||||| ||||||||||||||||    
T  7333863 aatataacattaacatataatttttacaaaagaatgaagta 7333903  T

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Target: scaffold0022 (Bit Score: 104; Significance: 5e-52; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 149281 - 149089
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| |||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| ||| || |||| ||    
T  149281 ccaataatataacgttgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatat--ttttaaggtgaataagtgttgtgtttg 149184  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    | |||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  149183 atgttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-tttttgtctactatatctacaat 149089  T

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Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 149361 - 149318
Alignment:
Q  14 aatataatattgacatataattttaacaaaagaatgaagtaaca 57  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  149361 aatataacattaacatataatttttacaaaagaatgaagtaaca 149318  T

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Target: scaffold0173 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 19345 - 19537
Alignment:
Q  9 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatannnnnnnggtgaacaagcgtggtgtctg 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||        |||||| ||| ||||||||||    
T  19345 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatat--ttttaaggtgaataagtgtggtgtctg 19442  T
Q  109 aggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgttttttgtctactatatctacaat 206  Q
    |||||||||||||||||||||||||   ||||||||||||||||||| ||| | ||| ||||||||||||||||| ||||||||||||| |||||||||    
T  19443 aggttcgaattccaacatctgcata---tatttgggaccacatatttaattatctttaatatgcattgagatttg-tttttgtctactacatctacaat 19537  T

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Target: scaffold0836 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 90 - 206
Target Start/End: Complemental strand, 5430 - 5317
Alignment:
Q  90 tgaacaagcgtggtgtctgaggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgtttttt 188  Q
    |||| |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  5430 tgaataagcgtggtgtctgaggttcgaattccaacatctgcata---tatttgggaccacatatttcattctctttgatatgcattgagatttg-ttttt 5335  T
Q  189 gtctactatatctacaat 206  Q
    ||||| ||||||||||||    
T  5334 gtctattatatctacaat 5317  T

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Target: scaffold0515 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 90 - 206
Target Start/End: Complemental strand, 6213 - 6100
Alignment:
Q  90 tgaacaagcgtggtgtctgaggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgtttttt 188  Q
    |||| ||| ||||||| |||||||||||||||||||||||||||   |||||| |||||||||||||||||| |||||||||||||||||| || |||||    
T  6213 tgaataagtgtggtgtttgaggttcgaattccaacatctgcata---tatttgagaccacatatttcattctctttgatatgcattgagatatg-ttttt 6118  T
Q  189 gtctactatatctacaat 206  Q
    |||||| | |||||||||    
T  6117 gtctacaacatctacaat 6100  T

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Target: scaffold0306 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 90 - 206
Target Start/End: Complemental strand, 6223 - 6110
Alignment:
Q  90 tgaacaagcgtggtgtctgaggttcgaattccaacatctgcatatattatttgggaccacatatttcattct-tttgatatgcattgagatttgtttttt 188  Q
    |||| ||| ||||||| |||||||||||||||||||||||||||   |||||| |||||||||||||||||| |||||||||||||||||| || |||||    
T  6223 tgaataagtgtggtgtttgaggttcgaattccaacatctgcata---tatttgagaccacatatttcattctctttgatatgcattgagatatg-ttttt 6128  T
Q  189 gtctactatatctacaat 206  Q
    |||||| | |||||||||    
T  6127 gtctacaacatctacaat 6110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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