View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17007_low_13 (Length: 367)

Name: NF17007_low_13
Description: NF17007
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17007_low_13
NF17007_low_13
[»] chr4 (12 HSPs)
chr4 (194-350)||(13140116-13140273)
chr4 (11-140)||(13140327-13140456)
chr4 (207-286)||(10376141-10376220)
chr4 (194-251)||(40293337-40293394)
chr4 (99-140)||(40293244-40293285)
chr4 (98-133)||(42853942-42853977)
chr4 (98-133)||(44272843-44272878)
chr4 (98-140)||(32871855-32871897)
chr4 (207-280)||(32871713-32871786)
chr4 (194-242)||(29963707-29963755)
chr4 (98-134)||(41609711-41609747)
chr4 (98-134)||(45521611-45521647)
[»] chr7 (14 HSPs)
chr7 (194-274)||(11813446-11813526)
chr7 (195-278)||(34820698-34820781)
chr7 (100-140)||(22588987-22589027)
chr7 (98-134)||(37385265-37385301)
chr7 (98-133)||(40693561-40693596)
chr7 (207-276)||(27305913-27305982)
chr7 (98-132)||(38547313-38547347)
chr7 (98-140)||(43573569-43573611)
chr7 (98-140)||(48395251-48395293)
chr7 (98-135)||(26153649-26153686)
chr7 (194-279)||(42663300-42663385)
chr7 (98-134)||(22638916-22638952)
chr7 (98-134)||(23910283-23910319)
chr7 (98-134)||(25614853-25614889)
[»] chr5 (17 HSPs)
chr5 (194-278)||(30838251-30838335)
chr5 (194-269)||(14062730-14062805)
chr5 (98-140)||(30838391-30838433)
chr5 (98-137)||(14780450-14780489)
chr5 (98-140)||(2629821-2629863)
chr5 (98-140)||(14062859-14062901)
chr5 (98-133)||(29803228-29803263)
chr5 (98-133)||(34428163-34428198)
chr5 (98-140)||(844039-844081)
chr5 (98-140)||(8728607-8728649)
chr5 (195-277)||(35474482-35474564)
chr5 (98-140)||(41621954-41621996)
chr5 (98-140)||(42446317-42446359)
chr5 (98-134)||(19844341-19844377)
chr5 (98-134)||(31748339-31748375)
chr5 (98-134)||(32872930-32872966)
chr5 (92-140)||(38097776-38097824)
[»] chr2 (22 HSPs)
chr2 (194-267)||(31415112-31415185)
chr2 (194-279)||(18423649-18423733)
chr2 (98-140)||(15123962-15124004)
chr2 (98-136)||(22303206-22303244)
chr2 (92-134)||(3366429-3366471)
chr2 (98-132)||(15141476-15141510)
chr2 (98-140)||(18423787-18423829)
chr2 (98-140)||(18510678-18510720)
chr2 (98-140)||(24727616-24727658)
chr2 (98-140)||(25507258-25507300)
chr2 (98-140)||(31415241-31415283)
chr2 (98-140)||(31629607-31629649)
chr2 (195-269)||(34432392-34432466)
chr2 (98-140)||(40874287-40874329)
chr2 (222-275)||(13453844-13453897)
chr2 (230-275)||(22966923-22966968)
chr2 (99-136)||(43621978-43622015)
chr2 (98-134)||(8427555-8427591)
chr2 (98-134)||(18531604-18531640)
chr2 (98-134)||(29168728-29168764)
chr2 (194-274)||(29471921-29472001)
chr2 (98-134)||(43791834-43791870)
[»] chr8 (15 HSPs)
chr8 (194-269)||(21467483-21467557)
chr8 (196-278)||(13592860-13592942)
chr8 (208-276)||(23262824-23262892)
chr8 (194-250)||(26509535-26509591)
chr8 (98-140)||(45108683-45108725)
chr8 (98-140)||(13592769-13592811)
chr8 (222-278)||(26628995-26629051)
chr8 (222-274)||(45108605-45108657)
chr8 (98-134)||(40380284-40380320)
chr8 (98-133)||(9985711-9985746)
chr8 (98-140)||(21467387-21467429)
chr8 (98-140)||(26629136-26629178)
chr8 (98-140)||(30170755-30170797)
chr8 (95-140)||(39031238-39031283)
chr8 (92-132)||(11138904-11138944)
[»] chr1 (14 HSPs)
chr1 (98-136)||(7078530-7078568)
chr1 (98-136)||(34395949-34395987)
chr1 (98-140)||(35883633-35883675)
chr1 (207-267)||(35883504-35883564)
chr1 (98-136)||(11097914-11097952)
chr1 (103-140)||(19476152-19476190)
chr1 (99-132)||(3977559-3977592)
chr1 (99-140)||(41619060-41619101)
chr1 (211-264)||(49139640-49139693)
chr1 (98-134)||(16234326-16234362)
chr1 (98-134)||(24673072-24673108)
chr1 (98-134)||(32915104-32915140)
chr1 (98-134)||(34008183-34008219)
chr1 (98-134)||(47214211-47214247)
[»] scaffold0178 (1 HSPs)
scaffold0178 (103-140)||(11579-11616)
[»] scaffold0016 (1 HSPs)
scaffold0016 (98-134)||(204477-204513)
[»] chr3 (12 HSPs)
chr3 (98-134)||(50559244-50559280)
chr3 (93-140)||(3282531-3282578)
chr3 (98-133)||(45528975-45529010)
chr3 (98-136)||(2482704-2482742)
chr3 (98-140)||(25188491-25188533)
chr3 (98-140)||(41850946-41850988)
chr3 (101-134)||(41637312-41637345)
chr3 (98-134)||(1402653-1402689)
chr3 (98-134)||(32146018-32146054)
chr3 (98-134)||(34900643-34900679)
chr3 (98-134)||(48352999-48353035)
chr3 (98-134)||(49417578-49417614)
[»] scaffold0578 (1 HSPs)
scaffold0578 (103-140)||(7005-7043)
[»] scaffold0449 (1 HSPs)
scaffold0449 (98-140)||(9206-9248)
[»] scaffold0041 (1 HSPs)
scaffold0041 (98-132)||(34411-34445)
[»] chr6 (8 HSPs)
chr6 (98-140)||(13093629-13093671)
chr6 (222-276)||(31204698-31204752)
chr6 (98-132)||(32644626-32644660)
chr6 (98-140)||(35213587-35213629)
chr6 (99-140)||(10840722-10840763)
chr6 (98-134)||(27334861-27334897)
chr6 (98-134)||(27395601-27395637)
chr6 (98-138)||(33683503-33683543)
[»] scaffold1625 (1 HSPs)
scaffold1625 (99-140)||(807-848)


Alignment Details
Target: chr4 (Bit Score: 130; Significance: 3e-67; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 194 - 350
Target Start/End: Complemental strand, 13140273 - 13140116
Alignment:
Q  194 cattgtttatgttcaataaaaagaggagaaaagtagttgtcacaagagtcgtacaaaattggttgtacaaatatcaatcctctttat-aaaaaagcttat 292  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||| |||||||    
T  13140273 cattgtttctgttcaatagaaagaggagaaaagtagttgtcacaagagttgtacaaaattggttgtacaaatatcactcctctttatgaaaacagcttat 13140174  T
Q  293 gacacatccataagctgttttgaatctatttccacaggctcttcaatatagcttataa 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13140173 gacacatccataagctgttttgaatctatttccacaggctcttcaatatagcttataa 13140116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 13140456 - 13140327
Alignment:
Q  11 taatacttatggtacgtttgaattgactaatttgaacttaactactggcctaaccacttagactatctaagagaatttatgaaaaacaaatgatatttgt 110  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13140456 taatacttatggtacgtttgaattgactaatttgaacttaactattggcctaaccacttagactatctaagagaatttatgaaaaacaaatgatatttgt 13140357  T
Q  111 acatctattttttgacaacttttgaaacaa 140  Q
    ||||||||||||||||||||||||||||||    
T  13140356 acatctattttttgacaacttttgaaacaa 13140327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 286
Target Start/End: Original strand, 10376141 - 10376220
Alignment:
Q  207 caataaaaagaggagaaaagtagttgtcacaagagtcgtacaaaattggttgtacaaatatcaatcctctttataaaaaa 286  Q
    ||||||||||||||||||| | ||||| |||||| | ||| | |||||||||||||||||||| |||||| || ||||||    
T  10376141 caataaaaagaggagaaaaatggttgttacaagaattgtatacaattggttgtacaaatatcactcctctataaaaaaaa 10376220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 251
Target Start/End: Original strand, 40293337 - 40293394
Alignment:
Q  194 cattgtttatgttcaataaaaagaggagaaaagtagttgtcacaagagtcgtacaaaa 251  Q
    |||||||| |||||||||||||||||| |||| |||||||||||||| | ||||||||    
T  40293337 cattgtttttgttcaataaaaagaggaaaaaaatagttgtcacaagatttgtacaaaa 40293394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 40293244 - 40293285
Alignment:
Q  99 aatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    ||||||||||||||||| |||||||||||| |||||||||||    
T  40293244 aatgatatttgtacatcaattttttgacaatttttgaaacaa 40293285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 133
Target Start/End: Original strand, 42853942 - 42853977
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaactttt 133  Q
    |||||||||||||||| |||||||||||||||||||    
T  42853942 aaatgatatttgtacaactattttttgacaactttt 42853977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 133
Target Start/End: Complemental strand, 44272878 - 44272843
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaactttt 133  Q
    |||||||||||||||| |||||||||||||||||||    
T  44272878 aaatgatatttgtacaactattttttgacaactttt 44272843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 32871897 - 32871855
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||||||  |||||| |||||||||||||||||||    
T  32871897 aaatgatatttgtaccactatttcttgacaacttttgaaacaa 32871855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 280
Target Start/End: Complemental strand, 32871786 - 32871713
Alignment:
Q  207 caataaaaagaggagaaaagtagttgtcacaagagtcgtacaaaattggttgtacaaatatcaatcctctttat 280  Q
    ||||||||||||  |||||||  |||||| |||||| ||  | |||||| ||||||||||||| ||||||||||    
T  32871786 caataaaaagagaggaaaagtgattgtcaaaagagttgtcaagaattggatgtacaaatatcactcctctttat 32871713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 29963707 - 29963755
Alignment:
Q  194 cattgtttatgttcaataaaaagaggagaaaagtagttgtcacaagagt 242  Q
    |||||||| ||| |||||| ||||||||||||||  |||||||||||||    
T  29963707 cattgtttttgtccaataagaagaggagaaaagtgattgtcacaagagt 29963755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 41609747 - 41609711
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttg 134  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  41609747 aaatgatatttgtacatccattttatgacaacttttg 41609711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 45521647 - 45521611
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttg 134  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  45521647 aaatgatatttgtacatccattttatgacaacttttg 45521611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 4e-26; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 194 - 274
Target Start/End: Original strand, 11813446 - 11813526
Alignment:
Q  194 cattgtttatgttcaataaaaagaggagaaaagtagttgtcacaagagtcgtacaaaattggttgtacaaatatcaatcct 274  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||    
T  11813446 cattgtttttgtccaataaaaagaggagaaaagtagttgtcacaagagttatacaaaattggttgtacaaatatcactcct 11813526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 278
Target Start/End: Original strand, 34820698 - 34820781
Alignment:
Q  195 attgtttatgttcaataaaaagaggagaaaagtagttgtcacaagagtcgtacaaaattggttgtacaaatatcaatcctcttt 278  Q
    ||||||| ||| ||||||||| || |||||||||| |||||||||||| ||||||||||| |||| ||||||||| ||||||||    
T  34820698 attgtttttgtccaataaaaaaagaagaaaagtagatgtcacaagagttgtacaaaattgattgtgcaaatatcactcctcttt 34820781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 140
Target Start/End: Complemental strand, 22589027 - 22588987
Alignment:
Q  100 atgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||||| | ||||||||||||||||||||||||    
T  22589027 atgatatttgtacaaccattttttgacaacttttgaaacaa 22588987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 37385301 - 37385265
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttg 134  Q
    |||||||||||||||| ||||||||||||||||||||    
T  37385301 aaatgatatttgtacaactattttttgacaacttttg 37385265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 133
Target Start/End: Complemental strand, 40693596 - 40693561
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaactttt 133  Q
    |||||||||||||||| |||||||||||||||||||    
T  40693596 aaatgatatttgtacaactattttttgacaactttt 40693561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 276
Target Start/End: Complemental strand, 27305982 - 27305913
Alignment:
Q  207 caataaaaagaggagaaaag-tagttgtcacaagagtcgtacaaaattggttgtacaaatatcaatcctct 276  Q
    |||||||||||| ||||||| | |||||||||| ||| ||||||||||| ||||| |||||||| ||||||    
T  27305982 caataaaaagag-agaaaagatggttgtcacaaaagttgtacaaaattgattgtataaatatcactcctct 27305913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 132
Target Start/End: Complemental strand, 38547347 - 38547313
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttt 132  Q
    |||||||||||||||| ||||||||||||||||||    
T  38547347 aaatgatatttgtacaactattttttgacaacttt 38547313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 43573611 - 43573569
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||| ||||||||||| |||||||||||| |||||    
T  43573611 aaatgatatttgaacatctattttgtgacaacttttgcaacaa 43573569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 140
Target Start/End: Original strand, 48395251 - 48395293
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||||||| | | ||||||||||||||||||||||    
T  48395251 aaatgatatttgtacaaccactttttgacaacttttgaaacaa 48395293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 26153649 - 26153686
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttga 135  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  26153649 aaatgatatttgtacaactattttatgacaacttttga 26153686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 279
Target Start/End: Complemental strand, 42663385 - 42663300
Alignment:
Q  194 cattgtttatgttcaataaaaagaggagaaaagtagttgtcacaagagtcgtacaaaattggttgtacaaatatcaatcctcttta 279  Q
    |||||||| ||| |||| | |||||||||||||| |||||||| | ||| ||  || ||| | |||||||||||||||| ||||||    
T  42663385 cattgtttttgtccaatcacaagaggagaaaagtggttgtcaccaaagttgtctaatattagatgtacaaatatcaatcttcttta 42663300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 22638952 - 22638916
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttg 134  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  22638952 aaatgatatttgaacatctattttatgacaacttttg 22638916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 23910319 - 23910283
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttg 134  Q
    |||||||||||||||| | ||||||||||||||||||    
T  23910319 aaatgatatttgtacaaccattttttgacaacttttg 23910283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 25614889 - 25614853
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttg 134  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  25614889 aaatgatatttgtacatccattttttgataacttttg 25614853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 1e-23; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 30838335 - 30838251
Alignment:
Q  194 cattgtttatgttcaataaaaagaggagaaaagtagttgtcacaagagtcgtacaaaattggttgtacaaatatcaatcctcttt 278  Q
    |||||||| | | ||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||| ||||||||    
T  30838335 cattgtttttatccaataaaaagaggagaaaagtagttgtaacaagagttgtacaaaattggctgtacaaatatcactcctcttt 30838251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 269
Target Start/End: Complemental strand, 14062805 - 14062730
Alignment:
Q  194 cattgtttatgttcaataaaaagaggagaaaagtagttgtcacaagagtcgtacaaaattggttgtacaaatatca 269  Q
    |||||||| ||| |||||||||| | |||||||||||||||| |||||| ||||||||||||||||| ||||||||    
T  14062805 cattgtttttgtccaataaaaagtgtagaaaagtagttgtcataagagttgtacaaaattggttgtataaatatca 14062730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 30838433 - 30838391
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  30838433 aaatgatatttgtacatctactttttgacaacttttgaaacaa 30838391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 137
Target Start/End: Complemental strand, 14780489 - 14780450
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaa 137  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  14780489 aaatgatatttgtacatctactttttgacaacttttgaaa 14780450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 140
Target Start/End: Original strand, 2629821 - 2629863
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  2629821 aaatgatatttgtacaaccattttttgacaacttttgaaacaa 2629863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 14062901 - 14062859
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||| ||||||||||||| ||||||||||||||||    
T  14062901 aaatgatatttgaacatctattttttaacaacttttgaaacaa 14062859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 133
Target Start/End: Original strand, 29803228 - 29803263
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaactttt 133  Q
    |||||||||||||||| |||||||||||||||||||    
T  29803228 aaatgatatttgtacaactattttttgacaactttt 29803263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 133
Target Start/End: Original strand, 34428163 - 34428198
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaactttt 133  Q
    |||||||||||||||| |||||||||||||||||||    
T  34428163 aaatgatatttgtacaactattttttgacaactttt 34428198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 140
Target Start/End: Original strand, 844039 - 844081
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||| ||| | ||||||||||||||||||||||||    
T  844039 aaatgatatttgcacaaccattttttgacaacttttgaaacaa 844081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 8728649 - 8728607
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||||||| | | ||||||||||||||||||||||    
T  8728649 aaatgatatttgtacaaccactttttgacaacttttgaaacaa 8728607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 277
Target Start/End: Original strand, 35474482 - 35474564
Alignment:
Q  195 attgtttatgttcaataaaaagaggagaaaagtagttgtcacaagagtcgtacaaaattggttgtacaaatatcaatcctctt 277  Q
    ||||||| ||| ||||||||| ||   |||||| |||||||||| | | ||||||||||  |||||||||||||| |||||||    
T  35474482 attgtttttgtccaataaaaatagagaaaaagtggttgtcacaaaaattgtacaaaattaattgtacaaatatcattcctctt 35474564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 41621996 - 41621954
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||||||| | | ||||||||||||||||||||||    
T  41621996 aaatgatatttgtacaaccactttttgacaacttttgaaacaa 41621954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 42446359 - 42446317
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||| ||| |||||||||||||||||||| |||||    
T  42446359 aaatgatatttgaacaactattttttgacaacttttgcaacaa 42446317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 19844377 - 19844341
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttg 134  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  19844377 aaatgatatttgtacaactattttttgataacttttg 19844341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 31748339 - 31748375
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttg 134  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  31748339 aaatgatatttgtacaactatttttttacaacttttg 31748375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 32872966 - 32872930
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttg 134  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  32872966 aaatgatatttgaacaactattttttgacaacttttg 32872930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 140
Target Start/End: Original strand, 38097776 - 38097824
Alignment:
Q  92 aaaaacaaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    ||||| ||||||||| ||||||  |||||||| ||||||||||||||||    
T  38097776 aaaaaaaaatgatatctgtacaattattttttaacaacttttgaaacaa 38097824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 6e-22; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 194 - 267
Target Start/End: Complemental strand, 31415185 - 31415112
Alignment:
Q  194 cattgtttatgttcaataaaaagaggagaaaagtagttgtcacaagagtcgtacaaaattggttgtacaaatat 267  Q
    |||||||| ||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  31415185 cattgtttttgtccaataaaaagagaagaaaagtagttgtcacaagagttgtacaaaattggttgtataaatat 31415112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 279
Target Start/End: Complemental strand, 18423733 - 18423649
Alignment:
Q  194 cattgtttatgttcaataaaaagaggagaaaagtagttgtcacaagagtcgtacaaaattggttgtacaaatatcaatcctcttta 279  Q
    |||||||| ||| |||||||||||| ||||||||||||||||||||||| ||||||||||||  |||||||||||| || ||||||    
T  18423733 cattgtttttgtccaataaaaagagaagaaaagtagttgtcacaagagttgtacaaaattgg-cgtacaaatatcactcttcttta 18423649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 15124004 - 15123962
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  15124004 aaatgatatttgtacaaccattttttgacaacttttgaaacaa 15123962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 136
Target Start/End: Original strand, 22303206 - 22303244
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaa 136  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  22303206 aaatgatatttgtacaactattttttgacaacttttgaa 22303244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 134
Target Start/End: Complemental strand, 3366471 - 3366429
Alignment:
Q  92 aaaaacaaatgatatttgtacatctattttttgacaacttttg 134  Q
    ||||| |||||||||||||||||||||||| | ||||||||||    
T  3366471 aaaaaaaaatgatatttgtacatctattttattacaacttttg 3366429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 132
Target Start/End: Original strand, 15141476 - 15141510
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttt 132  Q
    |||||||||||||||||||||||| ||||||||||    
T  15141476 aaatgatatttgtacatctattttatgacaacttt 15141510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 18423829 - 18423787
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||||||||||||||||||| | ||||| ||||||    
T  18423829 aaatgatatttgtacatctattttttgatatcttttaaaacaa 18423787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 140
Target Start/End: Original strand, 18510678 - 18510720
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||| ||| |||||||||||||||||||| |||||    
T  18510678 aaatgatatttgaacaactattttttgacaacttttgcaacaa 18510720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 24727658 - 24727616
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||||||| | | ||||||||||||||||||||||    
T  24727658 aaatgatatttgtacaaccactttttgacaacttttgaaacaa 24727616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 140
Target Start/End: Original strand, 25507258 - 25507300
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||||||| | | ||||||||||||||||||||||    
T  25507258 aaatgatatttgtacaaccactttttgacaacttttgaaacaa 25507300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 31415283 - 31415241
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    ||||||||||||||| | || ||||||||||||||||||||||    
T  31415283 aaatgatatttgtacgtttactttttgacaacttttgaaacaa 31415241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 140
Target Start/End: Original strand, 31629607 - 31629649
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||||||| ||| |||||||||||||||| |||||    
T  31629607 aaatgatatttgtacaactactttttgacaacttttggaacaa 31629649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 34432466 - 34432392
Alignment:
Q  195 attgtttatgttcaataaaaagaggagaaaagtagttgtcacaagagtcgtacaaaattggttgtacaaatatca 269  Q
    ||||||| ||| ||||||||| ||   |||| | ||||||| || ||| ||||||||||||||||||||||||||    
T  34432466 attgtttttgtccaataaaaatagagaaaaaatggttgtcaaaaaagttgtacaaaattggttgtacaaatatca 34432392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 40874329 - 40874287
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||||||| | ||||||| ||||||||||||||||    
T  40874329 aaatgatatttgtacaaccattttttaacaacttttgaaacaa 40874287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 275
Target Start/End: Complemental strand, 13453897 - 13453844
Alignment:
Q  222 aaaagtagttgtcacaagagtcgtacaaaattggttgtacaaatatcaatcctc 275  Q
    |||||| |||||||||| | | ||| |||||||||||||||||||||| |||||    
T  13453897 aaaagtggttgtcacaaaaattgtataaaattggttgtacaaatatcactcctc 13453844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 275
Target Start/End: Original strand, 22966923 - 22966968
Alignment:
Q  230 ttgtcacaagagtcgtacaaaattggttgtacaaatatcaatcctc 275  Q
    |||||||||  || |||||||||||||||||||||||||| |||||    
T  22966923 ttgtcacaaaggttgtacaaaattggttgtacaaatatcactcctc 22966968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 43622015 - 43621978
Alignment:
Q  99 aatgatatttgtacatctattttttgacaacttttgaa 136  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  43622015 aatgatatttgtacaactattttatgacaacttttgaa 43621978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 8427555 - 8427591
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttg 134  Q
    |||||||||||| |||||||||||||||||| |||||    
T  8427555 aaatgatatttgaacatctattttttgacaatttttg 8427591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 18531604 - 18531640
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttg 134  Q
    |||||||||||||||| |||||||||||||| |||||    
T  18531604 aaatgatatttgtacaactattttttgacaatttttg 18531640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 29168728 - 29168764
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttg 134  Q
    |||||||||||||||| | ||||||||||||||||||    
T  29168728 aaatgatatttgtacaaccattttttgacaacttttg 29168764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 274
Target Start/End: Complemental strand, 29472001 - 29471921
Alignment:
Q  194 cattgtttatgttcaataaaaagaggagaaaagtagttgtcacaagagtcgtacaaaattggttgtacaaatatcaatcct 274  Q
    |||||||| ||| |||| | |||||||||||||| |||||||  | ||| ||| || ||| ||||||||||||||| ||||    
T  29472001 cattgtttctgtccaatcacaagaggagaaaagtggttgtcaacaaagttgtataatattagttgtacaaatatcactcct 29471921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 43791870 - 43791834
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttg 134  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  43791870 aaatgatatttgtacatccattttatgacaacttttg 43791834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 269
Target Start/End: Original strand, 21467483 - 21467557
Alignment:
Q  194 cattgtttatgttcaataaaaagaggagaaaagtagttgtcacaagagtcgtacaaaattggttgtacaaatatca 269  Q
    |||||||| ||| |||||||| || ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  21467483 cattgtttttgtccaataaaa-gatgagaaaaatagttgtcacaagagttgtacaaaattggttgtacaaatatca 21467557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 196 - 278
Target Start/End: Original strand, 13592860 - 13592942
Alignment:
Q  196 ttgtttatgttcaataaaaagaggagaaaagtagttgtcacaagagtcgtacaaaattggttgtacaaatatcaatcctcttt 278  Q
    |||||| | ||||||||||||||||||||| || |||||||||||  |||||||||||  |||||||||||||| ||||||||    
T  13592860 ttgttttttttcaataaaaagaggagaaaattaattgtcacaagaaccgtacaaaatttattgtacaaatatcactcctcttt 13592942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 276
Target Start/End: Original strand, 23262824 - 23262892
Alignment:
Q  208 aataaaaagaggagaaaagtagttgtcacaagagtcgtacaaaattggttgtacaaatatcaatcctct 276  Q
    |||||||||||||||||| ||||| |||||| ||| ||||||||||||||||| |||||||| ||||||    
T  23262824 aataaaaagaggagaaaaatagttatcacaaaagttgtacaaaattggttgtaaaaatatcactcctct 23262892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 250
Target Start/End: Original strand, 26509535 - 26509591
Alignment:
Q  194 cattgtttatgttcaataaaaagaggagaaaagtagttgtcacaagagtcgtacaaa 250  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  26509535 cattgtttttgtccaataaaaagaggagaaaagtagttgtcacaagagttgtacaaa 26509591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 45108725 - 45108683
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  45108725 aaatgatatttgtacatctattttttgacaacttttgaaacaa 45108683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 140
Target Start/End: Original strand, 13592769 - 13592811
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  13592769 aaatgatatttgtacacctattttttgacaacttttgaaacaa 13592811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 26629051 - 26628995
Alignment:
Q  222 aaaagtagttgtcacaagagtcgtacaaaattggttgtacaaatatcaatcctcttt 278  Q
    |||||| ||||||||||  || |||||||||||||||||||||||||| ||||||||    
T  26629051 aaaagtggttgtcacaaatgttgtacaaaattggttgtacaaatatcactcctcttt 26628995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 45108657 - 45108605
Alignment:
Q  222 aaaagtagttgtcacaagagtcgtacaaaattggttgtacaaatatcaatcct 274  Q
    ||||||| || |||||||||| |||||||||||||||||||||||||| ||||    
T  45108657 aaaagtaattatcacaagagttgtacaaaattggttgtacaaatatcactcct 45108605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 40380284 - 40380320
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttg 134  Q
    |||||||||||||||||||||||| ||||||||||||    
T  40380284 aaatgatatttgtacatctattttatgacaacttttg 40380320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 133
Target Start/End: Complemental strand, 9985746 - 9985711
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaactttt 133  Q
    |||||||||||||||||||||||| |||||||||||    
T  9985746 aaatgatatttgtacatctattttatgacaactttt 9985711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 140
Target Start/End: Original strand, 21467387 - 21467429
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    ||||||||||| ||||| |||||||||||||||||| ||||||    
T  21467387 aaatgatatttatacatttattttttgacaacttttaaaacaa 21467429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 26629178 - 26629136
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||||||| | | ||||||||||||||||||||||    
T  26629178 aaatgatatttgtacaaccactttttgacaacttttgaaacaa 26629136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 30170797 - 30170755
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||||||| | | ||||||||||||||||||||||    
T  30170797 aaatgatatttgtacaaccactttttgacaacttttgaaacaa 30170755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 39031283 - 39031238
Alignment:
Q  95 aacaaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||||||||||  |||||||| | ||||||||||||||    
T  39031283 aacaaatgatatttgtacaattatttttttataacttttgaaacaa 39031238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 11138904 - 11138944
Alignment:
Q  92 aaaaacaaatgatatttgtacatctattttttgacaacttt 132  Q
    ||||| |||||||||||||||| ||||||| ||||||||||    
T  11138904 aaaaaaaaatgatatttgtacaactattttgtgacaacttt 11138944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000001; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 136
Target Start/End: Complemental strand, 7078568 - 7078530
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaa 136  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  7078568 aaatgatatttgtacatctattttgtgacaacttttgaa 7078530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 136
Target Start/End: Complemental strand, 34395987 - 34395949
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaa 136  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  34395987 aaatgatatttgtacatctattttatgacaacttttgaa 34395949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 35883675 - 35883633
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    ||||||||||||||||  |||||||||||||||||||||||||    
T  35883675 aaatgatatttgtacaattattttttgacaacttttgaaacaa 35883633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 35883564 - 35883504
Alignment:
Q  207 caataaaaagaggagaaaagtagttgtcacaagagtcgtacaaaattggttgtacaaatat 267  Q
    ||||||||||||   |||||| ||||||||||  || ||||||||||||||||||||||||    
T  35883564 caataaaaagagagaaaaagtggttgtcacaaaggttgtacaaaattggttgtacaaatat 35883504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 136
Target Start/End: Complemental strand, 11097952 - 11097914
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaa 136  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  11097952 aaatgatatttgtacatccattttgtgacaacttttgaa 11097914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 140
Target Start/End: Complemental strand, 19476190 - 19476152
Alignment:
Q  103 atatttgtacatctatttttt-gacaacttttgaaacaa 140  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  19476190 atatttgtacatctatttttttgacaacttttgaaacaa 19476152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 3977559 - 3977592
Alignment:
Q  99 aatgatatttgtacatctattttttgacaacttt 132  Q
    ||||||||||||||||||||||| ||||||||||    
T  3977559 aatgatatttgtacatctattttgtgacaacttt 3977592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 41619060 - 41619101
Alignment:
Q  99 aatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||    
T  41619060 aatgatatttgtacaactattttttgataacttttgagacaa 41619101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 49139693 - 49139640
Alignment:
Q  211 aaaaagaggagaaaagtagttgtcacaagagtcgtacaaaattggttgtacaaa 264  Q
    ||||||||||||||| ||||||||| || |||  |||||||||| |||||||||    
T  49139693 aaaaagaggagaaaaatagttgtcataaaagttatacaaaattgattgtacaaa 49139640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 16234362 - 16234326
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttg 134  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  16234362 aaatgatatttgtacatccattttatgacaacttttg 16234326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 24673072 - 24673108
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttg 134  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  24673072 aaatgatatttgaacatctattttatgacaacttttg 24673108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 32915140 - 32915104
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttg 134  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  32915140 aaatgatatttgaacatctattttatgacaacttttg 32915104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 34008183 - 34008219
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttg 134  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  34008183 aaatgatatttgaacatctattttatgacaacttttg 34008219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 47214211 - 47214247
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttg 134  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  47214211 aaatgatatttgaacatctattttatgacaacttttg 47214247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 140
Target Start/End: Complemental strand, 11616 - 11579
Alignment:
Q  103 atatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||| |||||||||||||||||||||||||    
T  11616 atatttgtacatttattttttgacaacttttgaaacaa 11579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 204513 - 204477
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttg 134  Q
    |||||||||||||||||||||||| ||||||||||||    
T  204513 aaatgatatttgtacatctattttctgacaacttttg 204477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000002; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 50559280 - 50559244
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttg 134  Q
    |||||||||||||||| ||||||||||||||||||||    
T  50559280 aaatgatatttgtacaactattttttgacaacttttg 50559244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 140
Target Start/End: Original strand, 3282531 - 3282578
Alignment:
Q  93 aaaacaaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||| |||||||||||||| |  |||||||||||||||||||||||||    
T  3282531 aaaagaaatgatatttgtataagtattttttgacaacttttgaaacaa 3282578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 133
Target Start/End: Complemental strand, 45529010 - 45528975
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaactttt 133  Q
    |||||||||||||||| |||||||||||||||||||    
T  45529010 aaatgatatttgtacaactattttttgacaactttt 45528975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 136
Target Start/End: Complemental strand, 2482742 - 2482704
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaa 136  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  2482742 aaatgatatttgtacatccattttgtgacaacttttgaa 2482704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 25188533 - 25188491
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||| ||| |||||||||||||||||||| |||||    
T  25188533 aaatgatatttgaacaactattttttgacaacttttgcaacaa 25188491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 140
Target Start/End: Original strand, 41850946 - 41850988
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||||||| | || |||||||||||||||||||||    
T  41850946 aaatgatatttgtacaaccatattttgacaacttttgaaacaa 41850988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 134
Target Start/End: Complemental strand, 41637345 - 41637312
Alignment:
Q  101 tgatatttgtacatctattttttgacaacttttg 134  Q
    ||||||||||||| ||||||||||||||||||||    
T  41637345 tgatatttgtacaactattttttgacaacttttg 41637312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 1402653 - 1402689
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttg 134  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  1402653 aaatgatatttgtacatccattttatgacaacttttg 1402689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 32146054 - 32146018
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttg 134  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  32146054 aaatgatatttgaacaactattttttgacaacttttg 32146018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 34900643 - 34900679
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttg 134  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  34900643 aaatgataattgtacatctattttatgacaacttttg 34900679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 48352999 - 48353035
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttg 134  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  48352999 aaatgatatttgtacatccattttttaacaacttttg 48353035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 49417578 - 49417614
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttg 134  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  49417578 aaatgatatttgaacatctattttatgacaacttttg 49417614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 140
Target Start/End: Complemental strand, 7043 - 7005
Alignment:
Q  103 atatttgtacatctatttttt-gacaacttttgaaacaa 140  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  7043 atatttgtacatctatttttttgacaacttttgaaacaa 7005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 140
Target Start/End: Original strand, 9206 - 9248
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||| ||||||||||  ||||||||||||||||||    
T  9206 aaatgatatttgaacatctatttaatgacaacttttgaaacaa 9248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 132
Target Start/End: Original strand, 34411 - 34445
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttt 132  Q
    |||||||||||||||| ||||||||||||||||||    
T  34411 aaatgatatttgtacaactattttttgacaacttt 34445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000003; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 140
Target Start/End: Original strand, 13093629 - 13093671
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||||||| | | ||||||||||||||||||||||    
T  13093629 aaatgatatttgtacaaccactttttgacaacttttgaaacaa 13093671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 276
Target Start/End: Complemental strand, 31204752 - 31204698
Alignment:
Q  222 aaaagtagttgtcacaagagtcgtacaaaattggttgtacaaatatcaatcctct 276  Q
    |||||| ||||||||||  || ||||||||||| |||||||||||||| ||||||    
T  31204752 aaaagtggttgtcacaaaggttgtacaaaattgattgtacaaatatcactcctct 31204698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 132
Target Start/End: Original strand, 32644626 - 32644660
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttt 132  Q
    |||||||||||||||| ||||||||||||||||||    
T  32644626 aaatgatatttgtacaactattttttgacaacttt 32644660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 35213629 - 35213587
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||| ||||||||||| |||||||||||| |||||    
T  35213629 aaatgatatttgaacatctattttgtgacaacttttgtaacaa 35213587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 10840722 - 10840763
Alignment:
Q  99 aatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||||||  ||||||||||||||||||| |||||    
T  10840722 aatgatatttgtacaattattttttgacaacttttggaacaa 10840763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 27334861 - 27334897
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttg 134  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  27334861 aaatgatatttgtacaactattttgtgacaacttttg 27334897  T

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Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 27395601 - 27395637
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttg 134  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  27395601 aaatgatatttgtacaactattttgtgacaacttttg 27395637  T

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Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 138
Target Start/End: Original strand, 33683503 - 33683543
Alignment:
Q  98 aaatgatatttgtacatctattttttgacaacttttgaaac 138  Q
    ||||||||||| || || |||||||||||||||||||||||    
T  33683503 aaatgatatttatatatttattttttgacaacttttgaaac 33683543  T

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Target: scaffold1625 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1625
Description:

Target: scaffold1625; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 848 - 807
Alignment:
Q  99 aatgatatttgtacatctattttttgacaacttttgaaacaa 140  Q
    |||||||||||||||   ||||||||||||||||||||||||    
T  848 aatgatatttgtacaatcattttttgacaacttttgaaacaa 807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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