View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17009_high_2 (Length: 335)
Name: NF17009_high_2
Description: NF17009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17009_high_2 |
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Alignment Details
Target: chr2 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 42 - 319
Target Start/End: Original strand, 37096127 - 37096400
Alignment:
| Q |
42 |
ttgtgttcattttatattgctaaaccctaaactctaaacaattgtgagagagaaaatggactctataataaacaagtatcatgaaaaataaacaggacta |
141 |
Q |
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| T |
37096127 |
ttgtgttcattttatattgctaaaccataaaccctaaacaattgtgagagagaaaatggaatctataataaacaagtatcatgaaaaataaacaggacta |
37096226 |
T |
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| Q |
142 |
gaagaagctcataatatacgtgtagttgatgtgcatttaccaaccaattaatatatatttaccttgaagaagcaacaccaagatgcaaagagcagtaaca |
241 |
Q |
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| T |
37096227 |
gaagaagctcataatatacgtgtagttgatgtgcatttaccaacc----aatatatatttaccttgaagaagcaacaccaagatgcaaagagcagtaaca |
37096322 |
T |
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| Q |
242 |
tataatattctatagtccttgtgcttagagaaattaagaagaggttgatagtttctttgcatgcagctgctccatatt |
319 |
Q |
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| T |
37096323 |
tataatattctatagtccttctgcttagagaaattaagaagaggttgatagtttctttgcatgcagctgctccatatt |
37096400 |
T |
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