View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1700_low_17 (Length: 323)

Name: NF1700_low_17
Description: NF1700
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1700_low_17
NF1700_low_17
[»] scaffold0312 (1 HSPs)
scaffold0312 (1-306)||(11272-11578)
[»] chr1 (15 HSPs)
chr1 (1-306)||(418993-419299)
chr1 (131-306)||(975834-976009)
chr1 (16-87)||(29833349-29833420)
chr1 (84-131)||(10909246-10909293)
chr1 (84-130)||(29834000-29834046)
chr1 (87-131)||(734578-734622)
chr1 (20-87)||(2404101-2404168)
chr1 (84-131)||(13011835-13011882)
chr1 (84-130)||(2403835-2403881)
chr1 (84-130)||(8933549-8933595)
chr1 (84-130)||(10911489-10911535)
chr1 (84-130)||(29833076-29833122)
chr1 (90-131)||(2409956-2409997)
chr1 (16-87)||(734852-734923)
chr1 (30-87)||(8933831-8933888)
[»] chr2 (14 HSPs)
chr2 (16-82)||(34576892-34576958)
chr2 (84-131)||(31487023-31487070)
chr2 (84-131)||(42277781-42277828)
chr2 (84-130)||(5164151-5164197)
chr2 (16-78)||(29801814-29801876)
chr2 (84-130)||(42275556-42275602)
chr2 (16-87)||(31489006-31489077)
chr2 (84-130)||(31489307-31489353)
chr2 (21-82)||(23859825-23859886)
chr2 (16-87)||(31486722-31486793)
chr2 (84-130)||(39816089-39816135)
chr2 (84-121)||(8995079-8995116)
chr2 (84-121)||(15730053-15730090)
chr2 (19-55)||(15729895-15729931)
[»] chr8 (13 HSPs)
chr8 (16-87)||(21268403-21268474)
chr8 (84-132)||(4879458-4879506)
chr8 (84-131)||(4877130-4877177)
chr8 (16-87)||(36377456-36377527)
chr8 (84-131)||(36379464-36379511)
chr8 (16-87)||(36379741-36379812)
chr8 (84-130)||(24519153-24519199)
chr8 (84-130)||(21268120-21268166)
chr8 (34-79)||(4876819-4876864)
chr8 (34-79)||(4879147-4879192)
chr8 (34-79)||(21268501-21268546)
chr8 (34-79)||(24519466-24519511)
chr8 (84-117)||(36377193-36377226)
[»] chr7 (26 HSPs)
chr7 (16-87)||(8733768-8733839)
chr7 (16-87)||(3932554-3932625)
chr7 (84-131)||(3932853-3932900)
chr7 (16-87)||(3934793-3934864)
chr7 (84-131)||(19789226-19789273)
chr7 (16-87)||(36464497-36464568)
chr7 (16-87)||(42678852-42678923)
chr7 (84-130)||(3935092-3935138)
chr7 (84-132)||(16496951-16496999)
chr7 (84-128)||(19786920-19786964)
chr7 (84-132)||(42678569-42678617)
chr7 (16-87)||(8414764-8414835)
chr7 (84-130)||(8414490-8414536)
chr7 (84-130)||(8731176-8731222)
chr7 (84-130)||(18395451-18395497)
chr7 (84-130)||(36464213-36464259)
chr7 (16-55)||(3052039-3052078)
chr7 (84-131)||(16535134-16535181)
chr7 (84-131)||(16630481-16630528)
chr7 (90-131)||(3052347-3052388)
chr7 (34-79)||(3932512-3932557)
chr7 (34-79)||(3934751-3934796)
chr7 (16-73)||(16497156-16497213)
chr7 (34-79)||(16497180-16497225)
chr7 (35-87)||(19786621-19786673)
chr7 (84-120)||(42680816-42680852)
[»] chr5 (15 HSPs)
chr5 (1-72)||(1779748-1779819)
chr5 (84-131)||(11852174-11852221)
chr5 (16-87)||(11852439-11852510)
chr5 (16-87)||(23164514-23164585)
chr5 (84-130)||(11849917-11849963)
chr5 (16-87)||(1779499-1779570)
chr5 (16-87)||(11850181-11850252)
chr5 (16-87)||(37207711-37207782)
chr5 (84-130)||(23164254-23164300)
chr5 (84-131)||(37208024-37208071)
chr5 (84-130)||(21743751-21743797)
chr5 (16-82)||(22600751-22600817)
chr5 (84-130)||(22601041-22601087)
chr5 (84-130)||(37215592-37215638)
chr5 (34-79)||(37207639-37207684)
[»] chr4 (14 HSPs)
chr4 (84-131)||(13774290-13774337)
chr4 (84-131)||(42470767-42470814)
chr4 (84-131)||(45162318-45162365)
chr4 (84-130)||(42468439-42468485)
chr4 (84-130)||(50855771-50855817)
chr4 (84-127)||(13776587-13776630)
chr4 (16-87)||(45166910-45166981)
chr4 (16-87)||(45162018-45162089)
chr4 (84-130)||(19429076-19429122)
chr4 (34-79)||(42468751-42468796)
chr4 (34-79)||(42471080-42471125)
chr4 (34-79)||(45161976-45162021)
chr4 (34-79)||(45166868-45166913)
chr4 (34-87)||(50856035-50856088)
[»] chr3 (3 HSPs)
chr3 (84-131)||(4530974-4531021)
chr3 (84-130)||(4533271-4533317)
chr3 (1-87)||(18966398-18966484)
[»] scaffold0599 (1 HSPs)
scaffold0599 (84-130)||(1755-1801)
[»] scaffold1361 (1 HSPs)
scaffold1361 (87-131)||(97-141)
[»] scaffold0050 (5 HSPs)
scaffold0050 (84-131)||(29468-29515)
scaffold0050 (1-52)||(31476-31527)
scaffold0050 (16-79)||(29143-29206)
scaffold0050 (1-52)||(29158-29209)
scaffold0050 (84-130)||(31783-31829)
[»] scaffold0008 (3 HSPs)
scaffold0008 (84-131)||(88485-88532)
scaffold0008 (34-79)||(73074-73119)
scaffold0008 (16-53)||(73116-73153)
[»] scaffold0098 (1 HSPs)
scaffold0098 (84-130)||(3707-3753)
[»] chr6 (1 HSPs)
chr6 (34-82)||(21199146-21199194)


Alignment Details
Target: scaffold0312 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 11272 - 11578
Alignment:
Q  1 ctaaagaaaaatgcagaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctaatagagtgtttctctatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11272 ctaaagaaaaatgcagaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctactagagtgtttctctatt 11371  T
Q  101 ttctctaccattccttttgtctctgagccagtgctatttgttttacttttacagttttaggtaagatatatttgctatgatgtattacatgtgtgttaat 200  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11372 ttctctaccatttcttttgtctctgaaccagtgctatttgttttacttttacagttttaggtaagatatatttgctatgatgtattacatgtgtcttaat 11471  T
Q  201 ttatgatatagtgaagct-tttcatttgggtgaaaatcaatgattttcatattgaactttaatattttcacttcttcattatagttaagcttgttttatt 299  Q
    ||||||||| |||||  |   |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11472 ttatgatatggtgaaaatcagtcatttgggtgaaaatcagtgattttcatattgaactttaatattttcacttcttcattatagttaagcttgttttatt 11571  T
Q  300 ttatatt 306  Q
    |||||||    
T  11572 ttatatt 11578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 259; Significance: 1e-144; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 419299 - 418993
Alignment:
Q  1 ctaaagaaaaatgcagaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctaatagagtgtttctctatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  419299 ctaaagaaaaatgcagaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctactagagtgtttctctatt 419200  T
Q  101 ttctctaccattccttttgtctctgagccagtgctatttgttttacttttacagttttaggtaagatatatttgctatgatgtattacatgtgtgttaat 200  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  419199 ttctctaccatttcttttgtctctgaaccagtgctatttgttttacttttacagttttaggtaagatatatttgctatgatgtattacatgtgtcttaat 419100  T
Q  201 ttatgatatagtgaagct-tttcatttgggtgaaaatcaatgattttcatattgaactttaatattttcacttcttcattatagttaagcttgttttatt 299  Q
    ||||||||| |||||  |   |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  419099 ttatgatatggtgaaaatcagtcatttgggtgaaaatcagtgattttcatattgaactttaatattttcacttcttcattatagttaagcttgttttatt 419000  T
Q  300 ttatatt 306  Q
    |||||||    
T  418999 ttatatt 418993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 131 - 306
Target Start/End: Original strand, 975834 - 976009
Alignment:
Q  131 gtgctatttgttttacttttacagttttaggtaagatatatttgctatgatgtattacatgtgtgttaatttatgatatagtgaagcttttcatttgggt 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  975834 gtgctatttgttttacttttacagttttaggtaagatatatttgctatgatgtattacatgtgtgttaatttatgatatagtgaagcttttcatttgggt 975933  T
Q  231 gaaaatcaatgattttcatattgaactttaatattttcacttcttcattatagttaagcttgttttattttatatt 306  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  975934 gaaaatcagtgattttcatattgaactttaatattttcacttcttcattatagttaagcttatttcattttatatt 976009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 29833420 - 29833349
Alignment:
Q  16 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctaataga 87  Q
    ||||||||||||||||||||||||||||| |||||||||| |||  ||  ||||||||||||||||| ||||    
T  29833420 gaagtctctagaacactaaagaataatatagaagtctctagaatactagggaataataaggaagctactaga 29833349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 10909246 - 10909293
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagccag 131  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  10909246 tagagtgtttctctattttctctacctttccttttgtccctgagccag 10909293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 29834000 - 29834046
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagcca 130  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  29834000 tagagtgtttctctattttctctacctttccttttgtccctgagcca 29834046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 734622 - 734578
Alignment:
Q  87 agtgtttctctattttctctaccattccttttgtctctgagccag 131  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||    
T  734622 agtgtttctctattttctctacctttccttttgtccctgagccag 734578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 2404168 - 2404101
Alignment:
Q  20 tctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctaataga 87  Q
    ||||||||| ||||||||||||||| |||||||||| |||  ||  ||||||||||||||||| ||||    
T  2404168 tctctagaagactaaagaataatatagaagtctctagaatactagggaataataaggaagctactaga 2404101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 13011835 - 13011882
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagccag 131  Q
    |||||||||||||||||||||||||| ||||||||||  |||||||||    
T  13011835 tagagtgtttctctattttctctacctttccttttgttcctgagccag 13011882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 2403881 - 2403835
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagcca 130  Q
    ||||| |||||||||||||||||||| ||||||||||| ||||||||    
T  2403881 tagagagtttctctattttctctacctttccttttgtccctgagcca 2403835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 8933595 - 8933549
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagcca 130  Q
    |||||||||||||||||||||||||| || |||||||| ||||||||    
T  8933595 tagagtgtttctctattttctctaccttttcttttgtccctgagcca 8933549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 10911489 - 10911535
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagcca 130  Q
    ||||||||||||||||||| |||||| ||||||||||| ||||||||    
T  10911489 tagagtgtttctctattttatctacctttccttttgtccctgagcca 10911535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 29833122 - 29833076
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagcca 130  Q
    |||||||||||||||||||||||||| | ||||||||| ||||||||    
T  29833122 tagagtgtttctctattttctctaccttcccttttgtccctgagcca 29833076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 2409997 - 2409956
Alignment:
Q  90 gtttctctattttctctaccattccttttgtctctgagccag 131  Q
    |||||||||||||||||||| ||||||||||| |||||||||    
T  2409997 gtttctctattttctctacctttccttttgtccctgagccag 2409956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 734923 - 734852
Alignment:
Q  16 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctaataga 87  Q
    ||||||| ||||| ||||||||||||||| |||||||||| |||  ||  |||||| |||||||||| ||||    
T  734923 gaagtctttagaagactaaagaataatatagaagtctctagaatactagggaataacaaggaagctactaga 734852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 8933888 - 8933831
Alignment:
Q  30 actaaagaataatatggaagtctctataatgttaaagaataataaggaagctaataga 87  Q
    ||||||||| |||||||||||||||| |||  ||  ||||||||||||||||| ||||    
T  8933888 actaaagaaaaatatggaagtctctaaaatactatggaataataaggaagctattaga 8933831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 8e-18; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 34576958 - 34576892
Alignment:
Q  16 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagcta 82  Q
    |||||||||||||||||||||||||||||||||||||||| |||  ||||||||||  |||||||||    
T  34576958 gaagtctctagaacactaaagaataatatggaagtctctaaaatactaaagaataacgaggaagcta 34576892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 31487023 - 31487070
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagccag 131  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  31487023 tagagtgtttctctattttctctacctttccttttgtccctgagccag 31487070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 42277828 - 42277781
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagccag 131  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  42277828 tagagtgtttctctattttctctacctttccttttgtccctgagccag 42277781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 5164197 - 5164151
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagcca 130  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  5164197 tagagtgtttctctattttctctacctttccttttgtccctgagcca 5164151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 29801814 - 29801876
Alignment:
Q  16 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaa 78  Q
    |||||||||||||||| ||||||||||| |||||| |||| |||  |||||||||||||||||    
T  29801814 gaagtctctagaacaccaaagaataatagggaagtatctagaatactaaagaataataaggaa 29801876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 42275602 - 42275556
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagcca 130  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  42275602 tagagtgtttctctattttctctacctttccttttgtccctgagcca 42275556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 31489006 - 31489077
Alignment:
Q  16 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctaataga 87  Q
    |||||||||| || ||||||||||||||| |||||||||| |||  ||  ||||||||||||||||| ||||    
T  31489006 gaagtctctaaaagactaaagaataatatagaagtctctagaatactagggaataataaggaagctactaga 31489077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 31489307 - 31489353
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagcca 130  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||    
T  31489307 tagagtgtttctctattttctctacctttccttttgtccctaagcca 31489353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 23859825 - 23859886
Alignment:
Q  21 ctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagcta 82  Q
    |||||||||||||||||||||||||| |||||||| |||  ||   ||||||||||||||||    
T  23859825 ctctagaacactaaagaataatatgggagtctctagaatactatgaaataataaggaagcta 23859886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 31486722 - 31486793
Alignment:
Q  16 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctaataga 87  Q
    |||| |||||||| |||| |||||||||| |||||||||| |||  ||  ||||||||||||||||| ||||    
T  31486722 gaagcctctagaagactagagaataatatagaagtctctagaatactagggaataataaggaagctactaga 31486793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 39816135 - 39816089
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagcca 130  Q
    ||||| |||||||||||||||||||| |||||||||||  |||||||    
T  39816135 tagagagtttctctattttctctacctttccttttgtccgtgagcca 39816089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 121
Target Start/End: Complemental strand, 8995116 - 8995079
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtc 121  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  8995116 tagagagtttctctattttctctacctttccttttgtc 8995079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 121
Target Start/End: Original strand, 15730053 - 15730090
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtc 121  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  15730053 tagagagtttctctattttctctacctttccttttgtc 15730090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 15729895 - 15729931
Alignment:
Q  19 gtctctagaacactaaagaataatatggaagtctcta 55  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  15729895 gtctctagaacaataaagaataatgtggaagtctcta 15729931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 5e-16; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 21268474 - 21268403
Alignment:
Q  16 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctaataga 87  Q
    ||||||||||||||||||||||||||||| |||||||||| |||  ||  ||||||||||||||||| ||||    
T  21268474 gaagtctctagaacactaaagaataatatagaagtctctagaatactagggaataataaggaagctactaga 21268403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 4879458 - 4879506
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagccagt 132  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  4879458 tagagtgtttctctattttctctacctttccttttgtccctgagccagt 4879506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 4877130 - 4877177
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagccag 131  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  4877130 tagagtgtttctctattttctctacctttccttttgtccctgagccag 4877177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 36377527 - 36377456
Alignment:
Q  16 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctaataga 87  Q
    ||||||||||||| ||||||||||||||| |||||||||| |||  ||  ||||||||||||||||| ||||    
T  36377527 gaagtctctagaagactaaagaataatatagaagtctctagaatactagggaataataaggaagctactaga 36377456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 36379511 - 36379464
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagccag 131  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  36379511 tagagtgtttctctattttctctacctttccttttgtccctgagccag 36379464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 36379812 - 36379741
Alignment:
Q  16 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctaataga 87  Q
    ||||||||||||| ||||||||||||||| |||||||||| |||  ||  ||||||||||||||||| ||||    
T  36379812 gaagtctctagaagactaaagaataatatagaagtctctagaatactagggaataataaggaagctactaga 36379741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 24519199 - 24519153
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagcca 130  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  24519199 tagagtgtttctctattttctctacctttccttttgtccctgagcca 24519153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 21268166 - 21268120
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagcca 130  Q
    |||||||||||||||||||||||||| || |||||||| ||||||||    
T  21268166 tagagtgtttctctattttctctaccttttcttttgtccctgagcca 21268120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 4876819 - 4876864
Alignment:
Q  34 aagaataatatggaagtctctataatgttaaagaataataaggaag 79  Q
    |||||||||||||||||||||| |||| | |||||||||| |||||    
T  4876819 aagaataatatggaagtctctagaatggtgaagaataatatggaag 4876864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 4879147 - 4879192
Alignment:
Q  34 aagaataatatggaagtctctataatgttaaagaataataaggaag 79  Q
    |||||||||||||||||||||| |||| | |||||||||| |||||    
T  4879147 aagaataatatggaagtctctagaatggtgaagaataatatggaag 4879192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 21268546 - 21268501
Alignment:
Q  34 aagaataatatggaagtctctataatgttaaagaataataaggaag 79  Q
    |||||||||||||||||||||| |||| | |||||||||| |||||    
T  21268546 aagaataatatggaagtctctagaatggtgaagaataatatggaag 21268501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 24519511 - 24519466
Alignment:
Q  34 aagaataatatggaagtctctataatgttaaagaataataaggaag 79  Q
    |||||||||||||||||||||| |||| | |||||||||| |||||    
T  24519511 aagaataatatggaagtctctagaatggtgaagaataatatggaag 24519466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 117
Target Start/End: Complemental strand, 36377226 - 36377193
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttt 117  Q
    |||||||||||||||||||||||||| |||||||    
T  36377226 tagagtgtttctctattttctctacctttccttt 36377193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 5e-16; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 8733839 - 8733768
Alignment:
Q  16 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctaataga 87  Q
    ||||||||||||||||||||||||||||| |||||||||| |||  ||  ||||||||||||||||| ||||    
T  8733839 gaagtctctagaacactaaagaataatatagaagtctctagaatactagggaataataaggaagctactaga 8733768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 3932554 - 3932625
Alignment:
Q  16 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctaataga 87  Q
    ||||||||||||| |||||||||||||||||||| ||||| |||  ||  ||||||||||||||||| ||||    
T  3932554 gaagtctctagaagactaaagaataatatggaagactctagaatactagggaataataaggaagctactaga 3932625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 3932853 - 3932900
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagccag 131  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  3932853 tagagtgtttctctattttctctacctttccttttgtccctgagccag 3932900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 3934793 - 3934864
Alignment:
Q  16 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctaataga 87  Q
    ||||||||||||| |||||||||||||||||||| ||||| |||  ||  ||||||||||||||||| ||||    
T  3934793 gaagtctctagaagactaaagaataatatggaagactctagaatactagggaataataaggaagctactaga 3934864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 19789226 - 19789273
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagccag 131  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  19789226 tagagtgtttctctattttctctacctttccttttgtccctgagccag 19789273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 36464568 - 36464497
Alignment:
Q  16 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctaataga 87  Q
    |||||||||||||||||||| |||||||| |||||||||| |||  ||  ||||||||||||||||| ||||    
T  36464568 gaagtctctagaacactaaataataatatagaagtctctagaatactagggaataataaggaagctactaga 36464497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 42678923 - 42678852
Alignment:
Q  16 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctaataga 87  Q
    ||||| ||||||| |||||||||||||||||||||||||| |||  ||  ||||||||||||||||| ||||    
T  42678923 gaagtttctagaaaactaaagaataatatggaagtctctaaaatactatggaataataaggaagctactaga 42678852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 3935092 - 3935138
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagcca 130  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  3935092 tagagtgtttctctattttctctacctttccttttgtccctgagcca 3935138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 16496999 - 16496951
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagccagt 132  Q
    |||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  16496999 tagagtgtttctctattttctctaccttcccttttgtccctgagccagt 16496951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 19786920 - 19786964
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagc 128  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||    
T  19786920 tagagtgtttctctattttctctacctttccttttgtccctgagc 19786964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 42678617 - 42678569
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagccagt 132  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||||||||    
T  42678617 tagagtgtttctttattttctctacctttccttttgtccctgagccagt 42678569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 8414835 - 8414764
Alignment:
Q  16 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctaataga 87  Q
    ||||| ||||||||||||||||||||||| |||||||||| |||  ||  ||||||||||||| ||| ||||    
T  8414835 gaagtatctagaacactaaagaataatatagaagtctctagaatactagggaataataaggaaactactaga 8414764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 8414536 - 8414490
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagcca 130  Q
    |||||||||| ||||||||||||||| ||||||||||| ||||||||    
T  8414536 tagagtgtttttctattttctctacctttccttttgtccctgagcca 8414490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 8731222 - 8731176
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagcca 130  Q
    ||||||||||||||||||| |||||| ||||||||||| ||||||||    
T  8731222 tagagtgtttctctattttatctacctttccttttgtccctgagcca 8731176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 18395451 - 18395497
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagcca 130  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||    
T  18395451 tagagtgtttctctattttctctacctttccttttgtccctaagcca 18395497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 36464259 - 36464213
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagcca 130  Q
    ||||||||||||| |||||||||||| ||||||||||| ||||||||    
T  36464259 tagagtgtttctcaattttctctacctttccttttgtccctgagcca 36464213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 3052039 - 3052078
Alignment:
Q  16 gaagtctctagaacactaaagaataatatggaagtctcta 55  Q
    |||||||||| |||||||||||||||||| ||||||||||    
T  3052039 gaagtctctataacactaaagaataatatagaagtctcta 3052078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 16535181 - 16535134
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagccag 131  Q
    |||||||||||||||||||||||||| | ||||||||| | |||||||    
T  16535181 tagagtgtttctctattttctctaccttcccttttgtccccgagccag 16535134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 16630481 - 16630528
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagccag 131  Q
    |||||||||||||||||||||||||| | ||||||||| | |||||||    
T  16630481 tagagtgtttctctattttctctaccttcccttttgtccccgagccag 16630528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 3052347 - 3052388
Alignment:
Q  90 gtttctctattttctctaccattccttttgtctctgagccag 131  Q
    |||||| ||||||||||||||||||||||||| || ||||||    
T  3052347 gtttctttattttctctaccattccttttgtccctcagccag 3052388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 3932512 - 3932557
Alignment:
Q  34 aagaataatatggaagtctctataatgttaaagaataataaggaag 79  Q
    |||||||||||||||||||||| |||| | |||||||||| |||||    
T  3932512 aagaataatatggaagtctctagaatgatgaagaataatatggaag 3932557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 3934751 - 3934796
Alignment:
Q  34 aagaataatatggaagtctctataatgttaaagaataataaggaag 79  Q
    |||||||||||||||||||||| |||| | |||||||||| |||||    
T  3934751 aagaataatatggaagtctctagaatgatgaagaataatatggaag 3934796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 16497213 - 16497156
Alignment:
Q  16 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataata 73  Q
    |||||||||||||   | |||||||||||||||||||||| |||| | ||||||||||    
T  16497213 gaagtctctagaatgatcaagaataatatggaagtctctagaatgatcaagaataata 16497156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 16497225 - 16497180
Alignment:
Q  34 aagaataatatggaagtctctataatgttaaagaataataaggaag 79  Q
    |||||||||||||||||||||| |||| | |||||||||| |||||    
T  16497225 aagaataatatggaagtctctagaatgatcaagaataatatggaag 16497180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 19786621 - 19786673
Alignment:
Q  35 agaataatatggaagtctctataatgttaaagaataataaggaagctaataga 87  Q
    |||||||| |||||||||||| ||| |||  ||||||||||||||||| ||||    
T  19786621 agaataatgtggaagtctctagaatattagggaataataaggaagctactaga 19786673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 42680816 - 42680852
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgt 120  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  42680816 tagagtgtttctctattttctctacctttcattttgt 42680852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 5e-16; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 1779819 - 1779748
Alignment:
Q  1 ctaaagaaaaatgcagaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataat 72  Q
    |||||||||||||  |||||||| | ||||||||||||||||||||||||||||| |||  |||||||||||    
T  1779819 ctaaagaaaaatgtggaagtctccataacactaaagaataatatggaagtctctagaatactaaagaataat 1779748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 11852221 - 11852174
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagccag 131  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  11852221 tagagtgtttctctattttctctacctttccttttgtccctgagccag 11852174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 11852510 - 11852439
Alignment:
Q  16 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctaataga 87  Q
    ||||||||||||| ||||||||||||||| |||||||||| |||  ||  ||||||||||||||||| ||||    
T  11852510 gaagtctctagaagactaaagaataatatagaagtctctagaatactagggaataataaggaagctactaga 11852439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 23164585 - 23164514
Alignment:
Q  16 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctaataga 87  Q
    ||||||||||||| ||||||||||||||| |||||||||| |||  ||  ||||||||||||||||| ||||    
T  23164585 gaagtctctagaagactaaagaataatatagaagtctctagaatactagggaataataaggaagctactaga 23164514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 11849963 - 11849917
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagcca 130  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  11849963 tagagtgtttctctattttctctacctttccttttgtccctgagcca 11849917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 1779570 - 1779499
Alignment:
Q  16 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctaataga 87  Q
    ||||| ||||||| ||||||||||||||| |||||||||| |||  ||  ||||||||||||||||| ||||    
T  1779570 gaagtttctagaaaactaaagaataatatagaagtctctaaaatactatggaataataaggaagctactaga 1779499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 11850252 - 11850181
Alignment:
Q  16 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctaataga 87  Q
    ||||||||||||| ||||||||||||||| |||||||||| |||  ||  |||||||||| |||||| ||||    
T  11850252 gaagtctctagaagactaaagaataatatagaagtctctaaaatactagggaataataagaaagctactaga 11850181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 37207711 - 37207782
Alignment:
Q  16 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctaataga 87  Q
    ||||||||||||| ||||||||||||||| ||||||| || |||  ||  ||||||||||||||||| ||||    
T  37207711 gaagtctctagaagactaaagaataatatagaagtctgtagaatactagggaataataaggaagctactaga 37207782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 23164300 - 23164254
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagcca 130  Q
    |||||||||||||||||||||||||| | ||||||||| ||||||||    
T  23164300 tagagtgtttctctattttctctaccttcccttttgtccctgagcca 23164254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 37208024 - 37208071
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagccag 131  Q
    ||||| |||||||||||||||||||| | ||||||||| |||||||||    
T  37208024 tagagagtttctctattttctctaccttcccttttgtccctgagccag 37208071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 21743751 - 21743797
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagcca 130  Q
    ||||| |||||||||||||||||||| ||||||||||| ||| ||||    
T  21743751 tagagagtttctctattttctctacctttccttttgtccctgggcca 21743797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 22600751 - 22600817
Alignment:
Q  16 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagcta 82  Q
    ||||||||||||| |||||| |||||||| |||||||||| |||  ||  |||||||||| ||||||    
T  22600751 gaagtctctagaagactaaataataatatagaagtctctagaatactatggaataataagaaagcta 22600817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 22601041 - 22601087
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagcca 130  Q
    ||||| |||||||||||||||||||| | ||||||||| ||||||||    
T  22601041 tagagagtttctctattttctctaccttcccttttgtccctgagcca 22601087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 37215592 - 37215638
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagcca 130  Q
    ||||| |||||||||||||||||||| | ||||||||| ||||||||    
T  37215592 tagagagtttctctattttctctaccttcccttttgtccctgagcca 37215638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 37207639 - 37207684
Alignment:
Q  34 aagaataatatggaagtctctataatgttaaagaataataaggaag 79  Q
    |||||||||||||||||||||| |||| | |||||||||| |||||    
T  37207639 aagaataatatggaagtctctagaatgatgaagaataatatggaag 37207684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 13774290 - 13774337
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagccag 131  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  13774290 tagagtgtttctctattttctctacctttccttttgtccctgagccag 13774337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 42470814 - 42470767
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagccag 131  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  42470814 tagagtgtttctctattttctctacctttccttttgtccctgagccag 42470767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 45162318 - 45162365
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagccag 131  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  45162318 tagagtgtttctctattttctctacctttccttttgtccctgagccag 45162365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 42468485 - 42468439
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagcca 130  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  42468485 tagagtgtttctctattttctctacctttccttttgtccctgagcca 42468439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 50855817 - 50855771
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagcca 130  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  50855817 tagagtgtttctctattttctctacctttccttttgtccctgagcca 50855771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 127
Target Start/End: Original strand, 13776587 - 13776630
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgag 127  Q
    |||||||||||||||||||||||||| ||||||||||| |||||    
T  13776587 tagagtgtttctctattttctctacctttccttttgtccctgag 13776630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 45166910 - 45166981
Alignment:
Q  16 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctaataga 87  Q
    ||||||||||||| ||||||||||||||| ||||||| || |||  ||  ||||||||||||||||| ||||    
T  45166910 gaagtctctagaagactaaagaataatatagaagtctttagaatactagggaataataaggaagctactaga 45166981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 45162018 - 45162089
Alignment:
Q  16 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctaataga 87  Q
    ||||||||||||| ||||||||||||||| ||||||| || |||  ||  |||||||||| |||||| ||||    
T  45162018 gaagtctctagaagactaaagaataatatagaagtctttagaatactagggaataataagaaagctactaga 45162089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 19429122 - 19429076
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagcca 130  Q
    ||||| |||||||||||||||||||| |||||||||||  |||||||    
T  19429122 tagagagtttctctattttctctacctttccttttgtccgtgagcca 19429076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 42468796 - 42468751
Alignment:
Q  34 aagaataatatggaagtctctataatgttaaagaataataaggaag 79  Q
    |||||||||||||||||||||| |||| | |||||||||| |||||    
T  42468796 aagaataatatggaagtctctagaatggtgaagaataatatggaag 42468751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 42471125 - 42471080
Alignment:
Q  34 aagaataatatggaagtctctataatgttaaagaataataaggaag 79  Q
    |||||||||||||||||||||| |||| | |||||||||| |||||    
T  42471125 aagaataatatggaagtctctagaatggtgaagaataatatggaag 42471080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 45161976 - 45162021
Alignment:
Q  34 aagaataatatggaagtctctataatgttaaagaataataaggaag 79  Q
    |||||||||||||||||||||| |||| | |||||||||| |||||    
T  45161976 aagaataatatggaagtctctagaatggtgaagaataatatggaag 45162021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 45166868 - 45166913
Alignment:
Q  34 aagaataatatggaagtctctataatgttaaagaataataaggaag 79  Q
    |||||||||||||||||||||| |||| | |||||||||| |||||    
T  45166868 aagaataatatggaagtctctagaatggtgaagaataatatggaag 45166913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 50856088 - 50856035
Alignment:
Q  34 aagaataatatggaagtctctataatgttaaagaataataaggaagctaataga 87  Q
    |||||||||||||||||||||| |||  ||  ||||||||||||||||| ||||    
T  50856088 aagaataatatggaagtctctagaatactatggaataataaggaagctactaga 50856035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 4530974 - 4531021
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagccag 131  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  4530974 tagagtgtttctctattttctctacctttccttttgtccctgagccag 4531021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 4533271 - 4533317
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagcca 130  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  4533271 tagagtgtttctctattttctctacctttccttttgtccctgagcca 4533317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 18966484 - 18966398
Alignment:
Q  1 ctaaagaaaaatgcagaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctaataga 87  Q
    |||||||| ||||  |||||||||||||||| ||||||||||| ||||||||||| |||  || | |||||||||| ||||| ||||    
T  18966484 ctaaagaataatgtggaagtctctagaacaccaaagaataatagggaagtctctagaatactagataataataaggtagctactaga 18966398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 1755 - 1801
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagcca 130  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  1755 tagagtgtttctctattttctctacctttccttttgtccctgagcca 1801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1361 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold1361
Description:

Target: scaffold1361; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 97 - 141
Alignment:
Q  87 agtgtttctctattttctctaccattccttttgtctctgagccag 131  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||    
T  97 agtgtttctctattttctctacctttccttttgtccctgagccag 141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000003; HSPs: 5)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 29468 - 29515
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagccag 131  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||||||    
T  29468 tagagagtttctctattttctctacctttccttttgtccctgagccag 29515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 31476 - 31527
Alignment:
Q  1 ctaaagaaaaatgcagaagtctctagaacactaaagaataatatggaagtct 52  Q
    |||||||| ||||  ||||||||||||||||| |||||||||||||||||||    
T  31476 ctaaagaacaatgtggaagtctctagaacactcaagaataatatggaagtct 31527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 29143 - 29206
Alignment:
Q  16 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaag 79  Q
    |||||||||| |||||||||||| ||| |||||||||||| ||  || |||||||||| |||||    
T  29143 gaagtctctaaaacactaaagaacaatgtggaagtctctagaacattcaagaataatatggaag 29206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 29158 - 29209
Alignment:
Q  1 ctaaagaaaaatgcagaagtctctagaacactaaagaataatatggaagtct 52  Q
    |||||||| ||||  ||||||||||||||| | |||||||||||||||||||    
T  29158 ctaaagaacaatgtggaagtctctagaacattcaagaataatatggaagtct 29209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 31783 - 31829
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagcca 130  Q
    ||||| |||||||||||||||||||| |||||||||||  |||||||    
T  31783 tagagagtttctctattttctctacctttccttttgtccttgagcca 31829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 88485 - 88532
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagccag 131  Q
    |||||| ||||||||||||||||||| ||||||||||| |||||||||    
T  88485 tagagtctttctctattttctctacctttccttttgtccctgagccag 88532  T

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Target: scaffold0008; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 73074 - 73119
Alignment:
Q  34 aagaataatatggaagtctctataatgttaaagaataataaggaag 79  Q
    |||||||||||||||||||||| |||| | |||||||||| |||||    
T  73074 aagaataatatggaagtctctagaatggtgaagaataatatggaag 73119  T

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Target: scaffold0008; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 73116 - 73153
Alignment:
Q  16 gaagtctctagaacactaaagaataatatggaagtctc 53  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  73116 gaagtctctagaagactaaagaataatatagaagtctc 73153  T

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Target: scaffold0098 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 3753 - 3707
Alignment:
Q  84 tagagtgtttctctattttctctaccattccttttgtctctgagcca 130  Q
    ||||| ||| |||||||||||||||| ||||||||||| ||||||||    
T  3753 tagagagttactctattttctctacctttccttttgtccctgagcca 3707  T

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Target: chr6 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 21199146 - 21199194
Alignment:
Q  34 aagaataatatggaagtctctataatgttaaagaataataaggaagcta 82  Q
    |||||||||||||||||||||| |||  ||  |||||||||||||||||    
T  21199146 aagaataatatggaagtctctagaatactatggaataataaggaagcta 21199194  T

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