View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1700_low_3 (Length: 506)

Name: NF1700_low_3
Description: NF1700
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1700_low_3
NF1700_low_3
[»] chr3 (63 HSPs)
chr3 (18-296)||(16735519-16735797)
chr3 (217-346)||(40272811-40272941)
chr3 (219-328)||(22609812-22609921)
chr3 (217-328)||(54484736-54484849)
chr3 (218-328)||(39203562-39203671)
chr3 (215-368)||(13628787-13628943)
chr3 (217-343)||(1217121-1217246)
chr3 (217-368)||(5173718-5173871)
chr3 (217-342)||(26869739-26869864)
chr3 (218-343)||(31592880-31593004)
chr3 (216-296)||(29366718-29366800)
chr3 (217-296)||(52926218-52926297)
chr3 (220-368)||(8247688-8247840)
chr3 (218-343)||(10795423-10795551)
chr3 (217-322)||(15797274-15797378)
chr3 (219-343)||(22122918-22123041)
chr3 (216-296)||(25517168-25517248)
chr3 (231-346)||(6411835-6411950)
chr3 (216-295)||(12914033-12914112)
chr3 (217-296)||(34771363-34771442)
chr3 (217-328)||(53996564-53996677)
chr3 (249-329)||(47624087-47624167)
chr3 (218-329)||(45786214-45786328)
chr3 (217-343)||(46421033-46421163)
chr3 (217-343)||(13730601-13730730)
chr3 (231-368)||(26573133-26573271)
chr3 (217-368)||(34420642-34420795)
chr3 (220-296)||(353351-353429)
chr3 (217-296)||(7943069-7943148)
chr3 (217-284)||(24851300-24851367)
chr3 (217-328)||(49013472-49013586)
chr3 (231-328)||(45948851-45948949)
chr3 (217-281)||(516506-516570)
chr3 (231-337)||(829455-829563)
chr3 (218-342)||(14986989-14987116)
chr3 (214-278)||(30452892-30452956)
chr3 (222-368)||(19731008-19731155)
chr3 (215-273)||(10484613-10484671)
chr3 (246-359)||(33926098-33926212)
chr3 (239-343)||(30928168-30928273)
chr3 (245-296)||(9276343-9276393)
chr3 (239-328)||(54374366-54374457)
chr3 (245-343)||(45139504-45139604)
chr3 (217-293)||(25944551-25944628)
chr3 (217-322)||(26292384-26292488)
chr3 (232-289)||(46169981-46170038)
chr3 (217-266)||(47624208-47624257)
chr3 (219-343)||(7696893-7697011)
chr3 (218-278)||(14266372-14266431)
chr3 (217-281)||(44403554-44403618)
chr3 (271-368)||(45620881-45620980)
chr3 (222-292)||(43114872-43114942)
chr3 (239-348)||(55401202-55401313)
chr3 (217-295)||(50624952-50625030)
chr3 (212-261)||(4495670-4495719)
chr3 (262-322)||(19751630-19751691)
chr3 (267-296)||(31904906-31904935)
chr3 (284-364)||(39212000-39212081)
chr3 (216-261)||(54032569-54032614)
chr3 (268-296)||(4495714-4495742)
chr3 (217-293)||(24577917-24577993)
chr3 (217-293)||(24578007-24578083)
chr3 (268-343)||(54032609-54032685)
[»] scaffold0867 (1 HSPs)
scaffold0867 (268-496)||(3719-3939)
[»] chr4 (67 HSPs)
chr4 (217-343)||(5648268-5648394)
chr4 (219-343)||(40915838-40915962)
chr4 (218-368)||(20224968-20225117)
chr4 (217-342)||(30639390-30639515)
chr4 (217-296)||(47444014-47444093)
chr4 (219-328)||(6430627-6430736)
chr4 (217-368)||(11054147-11054297)
chr4 (217-343)||(9832312-9832437)
chr4 (217-343)||(5306659-5306789)
chr4 (217-328)||(20639657-20639770)
chr4 (219-321)||(7909281-7909384)
chr4 (217-368)||(48598824-48598974)
chr4 (220-322)||(29207900-29208001)
chr4 (217-322)||(23501817-23501925)
chr4 (217-342)||(47528529-47528653)
chr4 (217-293)||(25629109-25629185)
chr4 (236-328)||(49796822-49796914)
chr4 (217-383)||(54175030-54175201)
chr4 (217-343)||(16408600-16408729)
chr4 (216-328)||(51865036-51865149)
chr4 (218-328)||(20405110-20405224)
chr4 (217-289)||(38786673-38786745)
chr4 (217-368)||(39077795-39077945)
chr4 (218-281)||(44363130-44363193)
chr4 (215-297)||(14983890-14983972)
chr4 (231-368)||(19027832-19027970)
chr4 (217-296)||(30352579-30352660)
chr4 (218-292)||(30690176-30690250)
chr4 (217-292)||(33836486-33836563)
chr4 (218-280)||(38755908-38755970)
chr4 (247-383)||(17043423-17043560)
chr4 (218-296)||(20225131-20225211)
chr4 (239-343)||(25463131-25463236)
chr4 (218-282)||(11394923-11394987)
chr4 (218-282)||(11404650-11404714)
chr4 (215-296)||(16911619-16911702)
chr4 (217-296)||(20908635-20908715)
chr4 (217-293)||(35567230-35567306)
chr4 (232-342)||(37494861-37494972)
chr4 (223-296)||(21489144-21489218)
chr4 (217-279)||(32484307-32484369)
chr4 (218-279)||(40553937-40553998)
chr4 (227-368)||(41018803-41018944)
chr4 (216-294)||(7038111-7038189)
chr4 (219-292)||(8473621-8473696)
chr4 (218-289)||(32478792-32478862)
chr4 (218-280)||(25388249-25388311)
chr4 (217-296)||(36816383-36816463)
chr4 (217-268)||(35532077-35532128)
chr4 (239-337)||(54967036-54967134)
chr4 (217-296)||(13256398-13256479)
chr4 (221-296)||(21647021-21647098)
chr4 (239-281)||(47482871-47482913)
chr4 (218-296)||(55766466-55766544)
chr4 (245-290)||(7385503-7385548)
chr4 (217-337)||(9987833-9987954)
chr4 (218-279)||(44718641-44718702)
chr4 (272-328)||(10379997-10380053)
chr4 (248-328)||(30581495-30581578)
chr4 (231-296)||(54730307-54730374)
chr4 (245-296)||(10277784-10277835)
chr4 (258-293)||(47441570-47441605)
chr4 (217-280)||(50555655-50555718)
chr4 (210-296)||(12711441-12711527)
chr4 (259-296)||(35894502-35894540)
chr4 (218-296)||(55830721-55830799)
chr4 (310-358)||(41549376-41549424)
[»] chr8 (49 HSPs)
chr8 (219-368)||(45071249-45071398)
chr8 (218-328)||(13160726-13160836)
chr8 (215-343)||(36720805-36720934)
chr8 (216-337)||(12625904-12626027)
chr8 (217-368)||(30454096-30454246)
chr8 (215-328)||(44530173-44530287)
chr8 (217-321)||(35261710-35261815)
chr8 (217-368)||(12670249-12670399)
chr8 (217-343)||(28817625-28817752)
chr8 (217-368)||(18164759-18164910)
chr8 (217-346)||(7136526-7136658)
chr8 (214-296)||(39460990-39461074)
chr8 (217-292)||(26102578-26102653)
chr8 (218-343)||(17823585-17823711)
chr8 (215-293)||(19729400-19729478)
chr8 (217-294)||(8897763-8897840)
chr8 (231-296)||(29877151-29877216)
chr8 (218-343)||(2626528-2626657)
chr8 (218-296)||(29521685-29521763)
chr8 (216-343)||(26954141-26954272)
chr8 (214-343)||(31457182-31457311)
chr8 (217-293)||(5135289-5135364)
chr8 (239-346)||(8483959-8484067)
chr8 (217-281)||(35107310-35107374)
chr8 (217-296)||(10857886-10857965)
chr8 (224-296)||(20284075-20284149)
chr8 (224-296)||(21070703-21070777)
chr8 (259-338)||(23000260-23000339)
chr8 (218-285)||(28407471-28407538)
chr8 (217-343)||(6760831-6760960)
chr8 (228-383)||(14017978-14018138)
chr8 (217-296)||(20869980-20870061)
chr8 (239-296)||(24365080-24365137)
chr8 (220-368)||(44781506-44781657)
chr8 (217-296)||(25250579-25250660)
chr8 (231-343)||(389652-389767)
chr8 (231-296)||(5689688-5689753)
chr8 (218-296)||(16225076-16225156)
chr8 (217-298)||(16013509-16013592)
chr8 (219-278)||(27507985-27508044)
chr8 (217-368)||(11000949-11001101)
chr8 (217-267)||(27468091-27468141)
chr8 (221-360)||(44742521-44742662)
chr8 (245-368)||(20869527-20869647)
chr8 (268-322)||(23286375-23286428)
chr8 (221-295)||(17250879-17250954)
chr8 (245-293)||(22598217-22598265)
chr8 (225-296)||(26457786-26457855)
chr8 (219-279)||(36486567-36486627)
[»] chr7 (63 HSPs)
chr7 (217-343)||(7879647-7879774)
chr7 (217-343)||(27629643-27629770)
chr7 (216-327)||(35787267-35787378)
chr7 (215-343)||(18512450-18512578)
chr7 (216-343)||(21172007-21172133)
chr7 (218-368)||(10693073-10693222)
chr7 (218-328)||(48735122-48735231)
chr7 (219-342)||(11617589-11617713)
chr7 (217-368)||(42391099-42391249)
chr7 (217-342)||(32758271-32758395)
chr7 (216-321)||(40463908-40464013)
chr7 (217-296)||(27889315-27889394)
chr7 (217-368)||(34626207-34626358)
chr7 (218-343)||(2541019-2541145)
chr7 (222-343)||(33871914-33872035)
chr7 (217-297)||(38262195-38262275)
chr7 (217-343)||(19426889-19427015)
chr7 (215-337)||(31591106-31591227)
chr7 (239-328)||(38604551-38604640)
chr7 (217-321)||(42798700-42798805)
chr7 (261-496)||(22065440-22065679)
chr7 (217-368)||(43557456-43557611)
chr7 (217-368)||(32233134-32233285)
chr7 (219-337)||(42476888-42477005)
chr7 (217-343)||(42805533-42805662)
chr7 (219-368)||(11741779-11741927)
chr7 (218-342)||(23419674-23419799)
chr7 (220-293)||(35334818-35334891)
chr7 (218-343)||(47716468-47716596)
chr7 (217-296)||(19265871-19265949)
chr7 (265-346)||(48123531-48123613)
chr7 (219-296)||(18747544-18747621)
chr7 (239-296)||(19266507-19266564)
chr7 (218-322)||(23231587-23231692)
chr7 (247-322)||(1408487-1408563)
chr7 (217-293)||(13805161-13805236)
chr7 (230-321)||(21139760-21139851)
chr7 (273-343)||(6736899-6736969)
chr7 (262-337)||(8148989-8149066)
chr7 (247-368)||(14099035-14099157)
chr7 (247-368)||(14409052-14409174)
chr7 (258-368)||(46354178-46354291)
chr7 (219-297)||(3469176-3469256)
chr7 (245-368)||(7644940-7645064)
chr7 (218-296)||(45018923-45019005)
chr7 (233-281)||(33500587-33500635)
chr7 (247-343)||(44123651-44123747)
chr7 (219-296)||(29907476-29907552)
chr7 (218-276)||(11888414-11888472)
chr7 (231-296)||(21566492-21566558)
chr7 (262-296)||(28362189-28362223)
chr7 (218-321)||(22698967-22699074)
chr7 (217-293)||(23618976-23619052)
chr7 (239-296)||(39123950-39124009)
chr7 (217-297)||(47077854-47077934)
chr7 (313-368)||(5653224-5653279)
chr7 (268-342)||(2662985-2663058)
chr7 (231-296)||(36267830-36267896)
chr7 (271-328)||(23604553-23604609)
chr7 (261-290)||(28078175-28078204)
chr7 (279-346)||(12473310-12473378)
chr7 (217-265)||(36602535-36602583)
chr7 (233-304)||(42101899-42101971)
[»] scaffold0057 (4 HSPs)
scaffold0057 (217-343)||(46840-46967)
scaffold0057 (213-337)||(43674-43798)
scaffold0057 (217-296)||(24771-24850)
scaffold0057 (239-281)||(46728-46770)
[»] chr2 (58 HSPs)
chr2 (212-343)||(8455310-8455442)
chr2 (216-328)||(9671205-9671316)
chr2 (215-368)||(21779258-21779410)
chr2 (217-296)||(10546220-10546299)
chr2 (217-328)||(36871517-36871627)
chr2 (217-343)||(14444738-14444864)
chr2 (218-328)||(25079717-25079829)
chr2 (217-328)||(17623588-17623700)
chr2 (218-368)||(10543682-10543835)
chr2 (217-321)||(25249737-25249841)
chr2 (214-328)||(11514460-11514574)
chr2 (249-368)||(12023950-12024069)
chr2 (218-294)||(14530377-14530455)
chr2 (218-368)||(23397750-23397899)
chr2 (239-328)||(32781309-32781399)
chr2 (218-294)||(40762234-40762310)
chr2 (217-343)||(17668011-17668138)
chr2 (217-368)||(24200622-24200776)
chr2 (217-343)||(24859987-24860112)
chr2 (221-337)||(4516354-4516471)
chr2 (216-337)||(39914304-39914426)
chr2 (216-296)||(44643580-44643660)
chr2 (217-296)||(17896317-17896396)
chr2 (220-279)||(41409936-41409995)
chr2 (215-281)||(23488555-23488621)
chr2 (230-292)||(24890472-24890534)
chr2 (218-296)||(25632566-25632644)
chr2 (231-343)||(19977727-19977840)
chr2 (214-278)||(34080176-34080240)
chr2 (219-279)||(40579750-40579810)
chr2 (216-296)||(5841085-5841167)
chr2 (249-296)||(22371111-22371158)
chr2 (217-368)||(26684619-26684773)
chr2 (217-343)||(25641511-25641637)
chr2 (227-296)||(99274-99343)
chr2 (239-328)||(17380258-17380347)
chr2 (231-328)||(30826061-30826157)
chr2 (217-278)||(34766330-34766391)
chr2 (215-266)||(22371199-22371250)
chr2 (239-293)||(21377094-21377148)
chr2 (217-327)||(27573646-27573756)
chr2 (239-329)||(31158460-31158553)
chr2 (258-328)||(5450309-5450381)
chr2 (219-296)||(13245096-13245173)
chr2 (217-296)||(4795811-4795891)
chr2 (217-368)||(7214518-7214672)
chr2 (218-273)||(8575975-8576030)
chr2 (218-281)||(14544138-14544201)
chr2 (234-289)||(24059012-24059067)
chr2 (239-368)||(33795269-33795399)
chr2 (258-296)||(23145738-23145776)
chr2 (258-296)||(23557528-23557566)
chr2 (226-288)||(31523296-31523358)
chr2 (251-296)||(44449416-44449462)
chr2 (231-328)||(30864430-30864527)
chr2 (231-296)||(39499243-39499308)
chr2 (222-266)||(124918-124962)
chr2 (259-287)||(4252656-4252684)
[»] scaffold0311 (1 HSPs)
scaffold0311 (217-343)||(10819-10946)
[»] chr1 (68 HSPs)
chr1 (216-337)||(14617076-14617198)
chr1 (215-343)||(10668257-10668388)
chr1 (217-328)||(46247952-46248064)
chr1 (217-356)||(12126836-12126974)
chr1 (213-368)||(34725093-34725247)
chr1 (218-296)||(4349718-4349796)
chr1 (240-368)||(25468285-25468414)
chr1 (215-343)||(32632554-32632682)
chr1 (217-368)||(27201654-27201808)
chr1 (217-328)||(35253186-35253296)
chr1 (216-342)||(41319804-41319931)
chr1 (221-296)||(45402176-45402251)
chr1 (221-343)||(46991836-46991959)
chr1 (215-321)||(27474335-27474441)
chr1 (239-328)||(11596560-11596649)
chr1 (216-361)||(35005137-35005285)
chr1 (216-296)||(19414517-19414597)
chr1 (217-328)||(31382213-31382324)
chr1 (217-328)||(38478281-38478391)
chr1 (239-332)||(30682857-30682949)
chr1 (217-328)||(18944690-18944805)
chr1 (215-343)||(20004087-20004218)
chr1 (247-368)||(20036227-20036350)
chr1 (217-328)||(23796512-23796624)
chr1 (215-343)||(30395723-30395854)
chr1 (217-296)||(1517310-1517389)
chr1 (223-285)||(4587568-4587630)
chr1 (215-296)||(6983808-6983889)
chr1 (239-296)||(15505644-15505701)
chr1 (232-328)||(23768334-23768431)
chr1 (231-368)||(47214518-47214654)
chr1 (217-281)||(50606498-50606562)
chr1 (217-296)||(6925180-6925259)
chr1 (221-296)||(10378738-10378813)
chr1 (217-297)||(42304206-42304288)
chr1 (216-337)||(9939499-9939624)
chr1 (217-296)||(18741956-18742037)
chr1 (231-343)||(19701602-19701716)
chr1 (239-368)||(44485130-44485260)
chr1 (217-342)||(45812536-45812660)
chr1 (216-296)||(20999848-20999928)
chr1 (225-296)||(31442396-31442468)
chr1 (253-368)||(22930104-22930218)
chr1 (263-368)||(27136696-27136803)
chr1 (216-283)||(33594129-33594196)
chr1 (217-292)||(43768223-43768298)
chr1 (216-297)||(19974072-19974154)
chr1 (217-294)||(8197125-8197202)
chr1 (261-322)||(21910692-21910753)
chr1 (217-297)||(50812019-50812099)
chr1 (247-296)||(19932782-19932833)
chr1 (218-368)||(35117765-35117919)
chr1 (239-368)||(18724566-18724696)
chr1 (239-332)||(20169110-20169204)
chr1 (231-293)||(23371206-23371267)
chr1 (239-295)||(4249464-4249520)
chr1 (239-295)||(4249788-4249844)
chr1 (239-295)||(4250112-4250168)
chr1 (217-281)||(30555210-30555274)
chr1 (231-368)||(2435799-2435938)
chr1 (233-296)||(4430014-4430077)
chr1 (217-292)||(35019314-35019388)
chr1 (247-296)||(6358201-6358251)
chr1 (268-341)||(10163793-10163867)
chr1 (267-328)||(33223031-33223093)
chr1 (272-343)||(4430080-4430152)
chr1 (231-328)||(22324940-22325038)
chr1 (231-290)||(45264412-45264472)
[»] chr5 (52 HSPs)
chr5 (217-368)||(19142942-19143093)
chr5 (216-343)||(32703433-32703559)
chr5 (216-343)||(41014328-41014455)
chr5 (217-343)||(8169983-8170108)
chr5 (216-293)||(16957374-16957451)
chr5 (231-330)||(7097773-7097872)
chr5 (217-296)||(24448947-24449026)
chr5 (218-296)||(34154814-34154892)
chr5 (216-368)||(38879565-38879720)
chr5 (215-320)||(2838811-2838915)
chr5 (219-328)||(20135628-20135740)
chr5 (221-337)||(7368413-7368528)
chr5 (239-337)||(43574621-43574720)
chr5 (218-296)||(16880647-16880725)
chr5 (217-343)||(35710322-35710447)
chr5 (217-296)||(43334260-43334340)
chr5 (215-296)||(4619101-4619184)
chr5 (216-291)||(3771401-3771476)
chr5 (218-296)||(1565489-1565566)
chr5 (218-344)||(13801767-13801896)
chr5 (218-280)||(25622533-25622595)
chr5 (216-328)||(29334419-29334533)
chr5 (231-371)||(1850621-1850761)
chr5 (218-297)||(12575660-12575740)
chr5 (218-337)||(24323706-24323825)
chr5 (218-337)||(24360330-24360449)
chr5 (253-368)||(24903731-24903847)
chr5 (218-293)||(5873322-5873397)
chr5 (239-293)||(22600514-22600568)
chr5 (239-291)||(10306495-10306548)
chr5 (217-297)||(1405243-1405323)
chr5 (219-292)||(12006329-12006404)
chr5 (217-277)||(16028623-16028683)
chr5 (239-296)||(27328809-27328868)
chr5 (240-283)||(21542489-21542532)
chr5 (266-385)||(22907913-22908032)
chr5 (247-296)||(12477149-12477199)
chr5 (216-278)||(39801591-39801653)
chr5 (246-343)||(41425957-41426055)
chr5 (218-337)||(42924830-42924954)
chr5 (247-327)||(208956-209037)
chr5 (231-296)||(13774922-13774987)
chr5 (214-291)||(22861665-22861742)
chr5 (216-269)||(32354211-32354264)
chr5 (221-281)||(21784335-21784395)
chr5 (222-293)||(30006385-30006456)
chr5 (218-277)||(30877564-30877623)
chr5 (310-383)||(22025512-22025585)
chr5 (217-293)||(37225960-37226037)
chr5 (231-297)||(3176770-3176833)
chr5 (217-296)||(28516432-28516512)
chr5 (258-293)||(39079791-39079827)
[»] chr6 (34 HSPs)
chr6 (216-342)||(1354755-1354880)
chr6 (217-368)||(1346948-1347098)
chr6 (217-368)||(29355854-29356008)
chr6 (217-290)||(13267788-13267861)
chr6 (217-368)||(2166409-2166563)
chr6 (217-368)||(2178042-2178196)
chr6 (220-337)||(23240826-23240942)
chr6 (217-328)||(26097184-26097294)
chr6 (215-297)||(23930124-23930206)
chr6 (218-295)||(383760-383837)
chr6 (217-342)||(9161133-9161260)
chr6 (217-328)||(12221913-12222028)
chr6 (217-328)||(25557749-25557859)
chr6 (225-296)||(3815084-3815155)
chr6 (217-280)||(6808468-6808531)
chr6 (216-296)||(12885968-12886050)
chr6 (217-296)||(12892064-12892145)
chr6 (220-289)||(15866041-15866110)
chr6 (218-328)||(7947371-7947483)
chr6 (212-284)||(24097646-24097718)
chr6 (231-295)||(33138891-33138955)
chr6 (218-308)||(13628256-13628346)
chr6 (239-296)||(32579482-32579539)
chr6 (217-328)||(18277192-18277304)
chr6 (217-296)||(3116128-3116209)
chr6 (218-286)||(10734905-10734974)
chr6 (220-289)||(15865859-15865928)
chr6 (231-292)||(22967237-22967298)
chr6 (231-292)||(23821095-23821156)
chr6 (217-328)||(1941879-1941991)
chr6 (213-296)||(28007683-28007765)
chr6 (248-328)||(11849077-11849159)
chr6 (239-286)||(11395827-11395875)
chr6 (232-291)||(19340889-19340949)
[»] scaffold0258 (1 HSPs)
scaffold0258 (217-342)||(13023-13148)
[»] scaffold0015 (1 HSPs)
scaffold0015 (216-345)||(48632-48760)
[»] scaffold1176 (1 HSPs)
scaffold1176 (222-368)||(1591-1736)
[»] scaffold0168 (1 HSPs)
scaffold0168 (217-342)||(30589-30713)
[»] scaffold0187 (2 HSPs)
scaffold0187 (220-368)||(10052-10199)
scaffold0187 (220-368)||(20380-20527)
[»] scaffold0180 (1 HSPs)
scaffold0180 (217-296)||(24132-24211)
[»] scaffold0223 (1 HSPs)
scaffold0223 (218-343)||(11140-11264)
[»] scaffold0049 (1 HSPs)
scaffold0049 (218-343)||(58986-59114)
[»] scaffold0018 (1 HSPs)
scaffold0018 (218-292)||(72867-72941)
[»] scaffold0954 (1 HSPs)
scaffold0954 (218-322)||(3574-3679)
[»] scaffold0254 (1 HSPs)
scaffold0254 (258-368)||(4141-4255)
[»] scaffold0194 (1 HSPs)
scaffold0194 (217-296)||(24705-24784)
[»] scaffold0036 (1 HSPs)
scaffold0036 (263-296)||(35062-35095)


Alignment Details
Target: chr3 (Bit Score: 255; Significance: 1e-141; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 18 - 296
Target Start/End: Complemental strand, 16735797 - 16735519
Alignment:
Q  18 aattgcgaagtacactaaacatcaaggtttcaaatagaaagtttcgcgacctatctaactgcaacatcaagattttttatgtctctacactgcaatgcaa 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16735797 aattgcgaagtacactaaacatcaaggtttcaaatagaaagtttcgcgacctatctaactgcaacatcaagattttttatgtctctacactgcaatgcaa 16735698  T
Q  118 ttgcaattaaagtcgcatcaaagacaaataactgcgattctatgcaatgtcaatnnnnnnnnttctaagcatctttcaaactaatgaaaatgattttata 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  16735697 ttgcaattaaagtcgcatcaaagacaaataactgcgattctatgcaatgtcaataaaaaaaattctaagcatctttcaaactaatgaaaatgattttata 16735598  T
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16735597 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 16735519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 217 - 346
Target Start/End: Original strand, 40272811 - 40272941
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttaca 315  Q
    ||||||||||||| ||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||   ||||| || | ||||||    
T  40272811 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttaca 40272910  T
Q  316 caagaggttgttttcagaacttaaacccatg 346  Q
    ||||||||||||| ||| |||| ||||||||    
T  40272911 caagaggttgtttccaggacttgaacccatg 40272941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 219 - 328
Target Start/End: Complemental strand, 22609921 - 22609812
Alignment:
Q  219 aagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaa 318  Q
    ||||||||||| ||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||   ||||| ||| |||||||||    
T  22609921 aagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaa 22609822  T
Q  319 gaggttgttt 328  Q
    |||| |||||    
T  22609821 gaggctgttt 22609812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 217 - 328
Target Start/End: Complemental strand, 54484849 - 54484736
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg--tatttac 314  Q
    ||||||||||||| ||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||   ||||||||  | |||||    
T  54484849 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtttttttac 54484750  T
Q  315 acaagaggttgttt 328  Q
    |||||||| |||||    
T  54484749 acaagaggctgttt 54484736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 218 - 328
Target Start/End: Complemental strand, 39203671 - 39203562
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacaca 317  Q
    |||||||||||| ||||||| ||||| ||||||| |||  ||||||||||||||||||||||||||||||||||||||||  ||||| ||| ||||||||    
T  39203671 aaagggcaacccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgt-tttacaca 39203573  T
Q  318 agaggttgttt 328  Q
    ||||| |||||    
T  39203572 agaggctgttt 39203562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 215 - 368
Target Start/End: Original strand, 13628787 - 13628943
Alignment:
Q  215 ataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgcaatgttaccttgtat-t 311  Q
    ||||||||||||||| ||||||| ||||| |||||||||||| ||||||||||||||||||||||  |||||||||||||||||   ||||| ||| | |    
T  13628787 ataaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttct 13628886  T
Q  312 tacacaagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    ||||||||||| ||||| ||| |||| ||||| || | ||||| |||| | ||||||    
T  13628887 tacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaaca 13628943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 217 - 343
Target Start/End: Complemental strand, 1217246 - 1217121
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    ||||||||||||| |||||||  |||| ||||||| |||| ||||||||||||||||| |||||||||||||||||||||   ||||| ||| |||||||    
T  1217246 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccgccatttggtgtattgtacgcagccttaccctgt-tttacac 1217148  T
Q  317 aagaggttgttttcagaacttaaaccc 343  Q
    |||||| ||||| ||| |||| |||||    
T  1217147 aagaggctgtttccaggacttgaaccc 1217121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 217 - 368
Target Start/End: Original strand, 5173718 - 5173871
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca--tttggtgtattgtacgcaatgttaccttgtatttac 314  Q
    ||||||||||||| ||||||| ||||| |||||||||||  ||||||||||||| |||||||  |||||||||||| | ||||  |||| |||| |||||    
T  5173718 aaaagggcaacccggtgcactaaagctcccgcatacgcaaggtccgggaaggggccccaccatttttggtgtattgcatgcaaccttactttgtttttac 5173817  T
Q  315 acaagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    |||||||||||||| ||| |||| ||||| || | ||||| |||| | ||||||    
T  5173818 acaagaggttgtttccaggacttgaacccgtgacctttcagtcacatgacaaca 5173871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 217 - 342
Target Start/End: Complemental strand, 26869864 - 26869739
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    ||||||||||||| ||||||  ||||| |||||||||||  |||||| ||||||||||||||||||||||||||||||||   ||||| ||| |||||||    
T  26869864 aaaagggcaacccggtgcaccaaagctcccgcatacgcatggtccggcaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacac 26869765  T
Q  317 aagaggttgttttcagaacttaaacc 342  Q
     ||||| ||||| ||| |||| ||||    
T  26869764 cagaggctgtttccaggacttgaacc 26869739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 218 - 343
Target Start/End: Complemental strand, 31593004 - 31592880
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacaca 317  Q
    |||||||||||| |||||||  |||| ||||||| |||| ||||||||||| |||||||||||||||||||||||||||   ||||| ||| ||||||||    
T  31593004 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggagtcccaccatttggtgtattgtacgcagccttaccctgt-tttacaca 31592906  T
Q  318 agaggttgttttcagaacttaaaccc 343  Q
    ||||| ||||| ||| |||| |||||    
T  31592905 agaggctgtttccaggacttgaaccc 31592880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 29366718 - 29366800
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgca 296  Q
    |||||||||||||||||||||| ||||| || ||||||||| ||||||||||||||||||||||  |||||||||||||||||    
T  29366718 taaaagggcaacccagtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgca 29366800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 52926218 - 52926297
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||||||||||| |||| || ||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  52926218 aaaagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaaggtgtcccaccatttggtgtattgtacgca 52926297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 220 - 368
Target Start/End: Original strand, 8247688 - 8247840
Alignment:
Q  220 agggcaacccagtgcactgaa-gctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgcaatgttaccttg-tatttaca 315  Q
    |||||||||||||||||| || ||| |||||||||||| ||||||||||| ||||||||||  ||||||||||||||||||  ||||| || | ||||||    
T  8247688 agggcaacccagtgcacttaaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtacgcaaccttaccctgttttttaca 8247787  T
Q  316 caagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    ||||||| ||||| ||| |||| ||||| || | ||||| |||| | ||||||    
T  8247788 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaaca 8247840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 218 - 343
Target Start/End: Original strand, 10795423 - 10795551
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca--tttggtgtattgtacgcaatgttaccttgt-atttac 314  Q
    |||||||||||  ||||||||||||| |||||||||||| |||| ||||||||||||||||  ||||||||||||||||||   ||||| |||  |||||    
T  10795423 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 10795522  T
Q  315 acaagaggttgttttcagaacttaaaccc 343  Q
    |||||||| ||||| ||| |||| |||||    
T  10795523 acaagaggctgtttccaggacttgaaccc 10795551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 217 - 322
Target Start/End: Complemental strand, 15797378 - 15797274
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    ||||||||||||| |||||||  |||| || |||| |||| |||||||||||||||||||||||||||||||||||||||   ||||| ||| |||||||    
T  15797378 aaaagggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-tttacac 15797280  T
Q  317 aagagg 322  Q
    ||||||    
T  15797279 aagagg 15797274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 219 - 343
Target Start/End: Original strand, 22122918 - 22123041
Alignment:
Q  219 aagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaa 318  Q
    ||||||||||| |||||||  ||||  |||||| |||| |||||||||||||||||||||||||||||||||||||||   ||||| ||| |||||||||    
T  22122918 aagggcaacccggtgcactagagctctcgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-tttacacaa 22123016  T
Q  319 gaggttgttttcagaacttaaaccc 343  Q
    |||  ||||| ||| |||| |||||    
T  22123017 gagactgtttccaggacttgaaccc 22123041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 25517168 - 25517248
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    |||||||||||||| ||||||| ||||| | ||||||||||  ||||||||||||||||||||||| ||||||||||||||    
T  25517168 taaaagggcaacccggtgcactaaagctccagcatacgcaggatccgggaaggggtcccaccattttgtgtattgtacgca 25517248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 231 - 346
Target Start/End: Original strand, 6411835 - 6411950
Alignment:
Q  231 gtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagaggttgttttc 330  Q
    ||||||| ||||| |||||||||||  ||| |||||||||||||| ||||||||||||||||||||   ||||| ||| ||||||||||||| ||||| |    
T  6411835 gtgcactaaagctcccgcatacgcaaggtctgggaaggggtcccatcatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttac 6411934  T
Q  331 agaacttaaacccatg 346  Q
    |  |||| ||||||||    
T  6411935 aagacttgaacccatg 6411950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 216 - 295
Target Start/End: Original strand, 12914033 - 12914112
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgc 295  Q
    |||||||||||||| ||||| ||||||| ||||||| |||| ||| ||||||||||| ||||||||||||||||||||||    
T  12914033 taaaagggcaacccggtgcattgaagctcccgcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgc 12914112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 34771363 - 34771442
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||||||| ||| |||||||  |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  34771363 aaaagggcagcccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgca 34771442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 217 - 328
Target Start/End: Original strand, 53996564 - 53996677
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca-tttggtgtattgtacgcaatgttaccttg-tatttac 314  Q
    ||||||||| ||| ||||||| ||||| || ||||||||||||| ||||||||||||||||| |||||||||||||| |||   ||||| || | |||||    
T  53996564 aaaagggcagcccggtgcactaaagctcccacatacgcagtgtcagggaaggggtcccaccattttggtgtattgtaagcagccttaccctgttttttac 53996663  T
Q  315 acaagaggttgttt 328  Q
    ||||||||||||||    
T  53996664 acaagaggttgttt 53996677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 249 - 329
Target Start/End: Complemental strand, 47624167 - 47624087
Alignment:
Q  249 atacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagaggttgtttt 329  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||   ||||| ||| ||||||||||||| ||||||    
T  47624167 atacacagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttt 47624087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 218 - 329
Target Start/End: Original strand, 45786214 - 45786328
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca--tttggtgtattgtacgcaatgttaccttg-tatttac 314  Q
    |||||||||||| ||||||| ||||| | |||| ||||| |||||||||||||||||||||  ||||||||||||||||||   ||||| || | |||||    
T  45786214 aaagggcaacccggtgcactaaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttac 45786313  T
Q  315 acaagaggttgtttt 329  Q
    |||||||| ||||||    
T  45786314 acaagaggctgtttt 45786328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 343
Target Start/End: Original strand, 46421033 - 46421163
Alignment:
Q  217 aaaagggcaacccagtgcactgaa-gctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgcaatgttaccttg-tattt 312  Q
    |||||||||| || ||||||| || ||| |||||||||||| ||||||||||||||||||||||  |||||||||||||||||   ||||| || | |||    
T  46421033 aaaagggcaaaccggtgcacttaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 46421132  T
Q  313 acacaagaggttgttttcagaacttaaaccc 343  Q
    |||||||||| ||||| ||| |||| |||||    
T  46421133 acacaagaggctgtttccaggacttgaaccc 46421163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 217 - 343
Target Start/End: Original strand, 13730601 - 13730730
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgcaatgttaccttg-tattta 313  Q
    ||||||||||||| ||||||| ||||| ||||||| || | ||||||||||||||||||||||  |||||||||||||| ||   ||||| || | ||||    
T  13730601 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgtttttta 13730700  T
Q  314 cacaagaggttgttttcagaacttaaaccc 343  Q
    ||||||||| ||||| ||| |||| |||||    
T  13730701 cacaagaggctgtttccaggacttgaaccc 13730730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 231 - 368
Target Start/End: Complemental strand, 26573271 - 26573133
Alignment:
Q  231 gtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttacacaagaggttgtttt 329  Q
    ||||||| |||||  ||||||||||| |||||||| |||||||||||| |||||||||||||||||   ||||| || | |||||||| |||| |||||     
T  26573271 gtgcactaaagctcacgcatacgcagggtccgggatggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacaggaggctgtttc 26573172  T
Q  330 cagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    ||| |||| ||||| || | ||||| |||||| ||||||    
T  26573171 caggacttgaacccgtgacctttcagtcacgtgacaaca 26573133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 217 - 368
Target Start/End: Original strand, 34420642 - 34420795
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca-tttggtgtattgtacgcaatgttaccttg-tatttac 314  Q
    ||||||||| ||  ||||||| ||||| || ||||||||  ||||||||||||||||||||| |||||||||| |||||||   ||||| || | |||||    
T  34420642 aaaagggcagccatgtgcactaaagctcccacatacgcaaggtccgggaaggggtcccaccattttggtgtatggtacgcagccttaccctgttttttac 34420741  T
Q  315 acaagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    |||||||| ||||| ||| |||| ||||| || | ||||| |||||| ||||||    
T  34420742 acaagaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaaca 34420795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 220 - 296
Target Start/End: Original strand, 353351 - 353429
Alignment:
Q  220 agggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgca 296  Q
    |||||||||| ||||||| ||||| ||||||| || | ||||||||||||||||||||||  |||||||||||||||||    
T  353351 agggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgca 353429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 7943148 - 7943069
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    |||| |||||||||||||||| ||||| |||||||||||  ||| || ||||| |||||||||||| |||||||||||||    
T  7943148 aaaaaggcaacccagtgcactaaagctcccgcatacgcatggtctggaaagggatcccaccatttgatgtattgtacgca 7943069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 217 - 284
Target Start/End: Original strand, 24851300 - 24851367
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggt 284  Q
    ||||||||||||| ||||||| ||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  24851300 aaaagggcaacccggtgcactaaagctcccgcatatgcaggatccgggaaggggtcccaccatttggt 24851367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 217 - 328
Target Start/End: Original strand, 49013472 - 49013586
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgcaatgttaccttg-tattta 313  Q
    ||||||||||||| ||||||| ||||| |||| || || | ||||||||||||||||||||||  |||||||||||||||||   ||||| || | ||||    
T  49013472 aaaagggcaacccggtgcactaaagctcccgcgtatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttta 49013571  T
Q  314 cacaagaggttgttt 328  Q
    ||||||||| |||||    
T  49013572 cacaagaggctgttt 49013586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 231 - 328
Target Start/End: Original strand, 45948851 - 45948949
Alignment:
Q  231 gtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgtta-ccttgtatttacacaagaggttgttt 328  Q
    ||||||| ||||| |||||||||||| ||||| ||||||||||||||| ||||||||||||| |||   ||| |||  | |||||||||||||||||||    
T  45948851 gtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccaattggtgtattgtatgcagccttaccctattttttacacaagaggttgttt 45948949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 217 - 281
Target Start/End: Complemental strand, 516570 - 516506
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccattt 281  Q
    ||||||||||||| ||||||| ||||| |||||||||||| ||| ||||||||||||| ||||||    
T  516570 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtcggggaaggggtcccgccattt 516506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 829455 - 829563
Alignment:
Q  231 gtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca-tttggtgtattgtacgcaatgttaccttg-tatttacacaagaggttgttt 328  Q
    ||||||| ||||| | |||||||||| || |||||||||||||||||| |||||||||||||||||||  ||||  || | |||| ||||||||||||||    
T  829455 gtgcactaaagctcctgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgcaactttactatgttctttagacaagaggttgttt 829554  T
Q  329 tcagaactt 337  Q
      |||||||    
T  829555 ctagaactt 829563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 14987116 - 14986989
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgcaatgttaccttg-tatttac 314  Q
    |||||| ||||| ||||||| ||||| ||||||| |||  ||||||||| ||||||||||||  |||||||||||||||||   ||||| || | |||||    
T  14987116 aaagggaaacccggtgcactaaagctcccgcatatgcaaggtccgggaatgggtcccaccattattggtgtattgtacgcagccttaccctgttttttac 14987017  T
Q  315 acaagaggttgttttcagaacttaaacc 342  Q
    |||||||| ||||| ||| |||| ||||    
T  14987016 acaagaggctgtttccaggacttgaacc 14986989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 214 - 278
Target Start/End: Complemental strand, 30452956 - 30452892
Alignment:
Q  214 tataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca 278  Q
    |||||||||||||||| |||||||  |||| ||||||| |||| |||||||||||||||||||||    
T  30452956 tataaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca 30452892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 368
Target Start/End: Complemental strand, 19731155 - 19731008
Alignment:
Q  222 ggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttacacaaga 320  Q
    |||| ||| ||||||| ||||| | |||||| ||| ||| ||||| ||||||||||| | ||||||||||||||||  |||||||| | |||||||||||    
T  19731155 ggcagcccggtgcactaaagctcctgcatacacagagtctgggaaagggtcccaccaataggtgtattgtacgcaaccttaccttgttttttacacaaga 19731056  T
Q  321 ggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    || | ||| ||| ||||  | || || | |||||||||||| ||||||    
T  19731055 ggctatttccaggacttgcatccgtgacctttcaatcacgtgacaaca 19731008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 215 - 273
Target Start/End: Original strand, 10484613 - 10484671
Alignment:
Q  215 ataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcc 273  Q
    ||||||||||||||| ||||||| ||||| |||||||||||| |||| |||||||||||    
T  10484613 ataaaagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcc 10484671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 246 - 359
Target Start/End: Complemental strand, 33926212 - 33926098
Alignment:
Q  246 cgcatacgcagtgtccgggaaggggtcccaccatt-tggtgtattgtacgcaatgttaccttgtatttacacaagaggttgttttcagaacttaaaccca 344  Q
    |||||| |||| |||| |||||||||||||||||| ||||||||||||| ||   ||||| ||| ||||||||||||| | ||| ||| |||| ||||||    
T  33926212 cgcatatgcagggtccaggaaggggtcccaccattatggtgtattgtacacagccttaccctgtttttacacaagaggctatttccaggacttgaaccca 33926113  T
Q  345 tggcttttcaatcac 359  Q
    || | ||||| ||||    
T  33926112 tgacctttcagtcac 33926098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 239 - 343
Target Start/End: Original strand, 30928168 - 30928273
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttacacaagaggttgttttcagaactt 337  Q
    ||||| || |||| |||| ||||||||||||||||| ||| |||||||||| ||| |||  |||||||| | ||||||||||||| ||||| ||| ||||    
T  30928168 aagctcccacatatgcagggtccgggaaggggtcccgccaattggtgtattttacacaaccttaccttgttttttacacaagaggctgtttccaggactt 30928267  T
Q  338 aaaccc 343  Q
     |||||    
T  30928268 gaaccc 30928273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 245 - 296
Target Start/End: Complemental strand, 9276393 - 9276343
Alignment:
Q  245 ccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    |||||||||||| ||||||||| |||||| ||||||||||||||||||||||    
T  9276393 ccgcatacgcagggtccgggaaagggtcc-accatttggtgtattgtacgca 9276343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 239 - 328
Target Start/End: Original strand, 54374366 - 54374457
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccacca-tttggtgtattgtacgcaatgtta-ccttgtatttacacaagaggttgttt 328  Q
    ||||| ||||||| |||| ||||||||||||||||||||| ||||||| ||||||||||   ||| |||  | |||||||||||||||||||    
T  54374366 aagctcccgcatatgcagggtccgggaaggggtcccaccattttggtggattgtacgcagccttaccctattttttacacaagaggttgttt 54374457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 343
Target Start/End: Original strand, 45139504 - 45139604
Alignment:
Q  245 ccgcatacgcagtgtccgggaaggggtcccaccattt--ggtgtattgtacgcaatgttaccttgtattt-acacaagaggttgttttcagaacttaaac 341  Q
    |||||||||||| ||| ||||||||||||||||||||  ||||||||||| |||   ||||| ||| ||| |||||||||||||||| || ||||| |||    
T  45139504 ccgcatacgcag-gtctgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtgttttacacaagaggttgtttccaaaacttgaac 45139602  T
Q  342 cc 343  Q
    ||    
T  45139603 cc 45139604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 217 - 293
Target Start/End: Complemental strand, 25944628 - 25944551
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca-tttggtgtattgtac 293  Q
    ||||||||| ||  |||| || ||||| || ||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  25944628 aaaagggcagcctggtgcgctaaagctcccacatacgcagggtcagggaaggggtcccaccattttggtgtattgtac 25944551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 217 - 322
Target Start/End: Complemental strand, 26292488 - 26292384
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    |||||| |||||| |||||||  || | ||||||| |||| || ||||||||| ||||| |||||||||||| ||||||  | ||||| ||| |||||||    
T  26292488 aaaaggacaacccggtgcactagagttcccgcatatgcagggttcgggaagggatcccatcatttggtgtatcgtacgcggtcttaccctgt-tttacac 26292390  T
Q  317 aagagg 322  Q
    ||||||    
T  26292389 aagagg 26292384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 232 - 289
Target Start/End: Original strand, 46169981 - 46170038
Alignment:
Q  232 tgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtatt 289  Q
    |||||||||||| || |||| |||| |||||||||||||||| |||||||||| ||||    
T  46169981 tgcactgaagctcccacatatgcagggtccgggaaggggtcctaccatttggtttatt 46170038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 47624257 - 47624208
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaa 266  Q
    ||||||||||||| ||||||| ||||| |||||||||||| |||||||||    
T  47624257 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 47624208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 343
Target Start/End: Original strand, 7696893 - 7697011
Alignment:
Q  219 aagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaa 318  Q
    ||||| ||||| |||||||  |||| || |||| ||||||||||||||||||     |||||||||||||||||||||   ||||| ||| |||||||||    
T  7696893 aagggaaacccggtgcactagagctcccacatatgcagtgtccgggaagggg-----ccatttggtgtattgtacgcagccttaccctgt-tttacacaa 7696986  T
Q  319 gaggttgttttcagaacttaaaccc 343  Q
    |||  ||||| ||| |||| |||||    
T  7696987 gagactgtttccaggacttgaaccc 7697011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 278
Target Start/End: Original strand, 14266372 - 14266431
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca 278  Q
    |||||||||||||||||||| ||||| |||||||||||| || | |||| |||||||||||    
T  14266372 aaagggcaacccagtgcactaaagctcccgcatacgcagggttcaggaa-gggtcccacca 14266431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 281
Target Start/End: Original strand, 44403554 - 44403618
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccattt 281  Q
    |||| |||| ||| ||||||| ||||| | ||||||| || ||||||||||||||||||||||||    
T  44403554 aaaaaggcagcccggtgcactaaagcttcagcatacgtagggtccgggaaggggtcccaccattt 44403618  T

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Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 368
Target Start/End: Original strand, 45620881 - 45620980
Alignment:
Q  271 tcccaccatttggtgtattgtacgcaatgttaccttg--tatttacacaagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    |||||||| |||||||||||||||||   ||||| ||  | ||||||||||||| ||||| |||||||| ||||| || | ||||| |||||| ||||||    
T  45620881 tcccaccaattggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccagaacttgaacccgtgacctttcagtcacgtgacaaca 45620980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 43114872 - 43114942
Alignment:
Q  222 ggcaacccagtgcactgaagctaccgcatacgcagtg-tccgggaaggggtcccaccatttggtgtattgta 292  Q
    ||||| ||| |||||| ||||| |||||||||||| | ||| ||||||| ||||||||||||||||||||||    
T  43114872 ggcaatccaatgcactaaagctcccgcatacgcaggggtccaggaaggg-tcccaccatttggtgtattgta 43114942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 348
Target Start/End: Complemental strand, 55401313 - 55401202
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccacca-tttggtgtattgtacgcaatgtt-accttgtatttacacaagaggttgttttcagaact 336  Q
    ||||| ||||||||| |  ||||| ||||||||||||||| ||||||||||| |||||| | || ||||  | ||||||||||||| ||||| ||| |||    
T  55401313 aagctcccgcatacggaaggtccgagaaggggtcccaccattttggtgtattatacgcagtcttaacctgttttttacacaagaggctgtttacaggact 55401214  T
Q  337 taaacccatggc 348  Q
    | |||| |||||    
T  55401213 tgaaccgatggc 55401202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 217 - 295
Target Start/End: Original strand, 50624952 - 50625030
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgc 295  Q
    ||||||||| ||| ||||||| ||||| || | ||||||| | || |||||| |||||||||  |||||||||||||||    
T  50624952 aaaagggcagcccggtgcactaaagctcccacttacgcagggcccaggaaggcgtcccaccaaatggtgtattgtacgc 50625030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 4495670 - 4495719
Alignment:
Q  212 tttataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtcc 261  Q
    |||| ||||||||||||| ||||||| ||||| |||||||||||| ||||    
T  4495670 tttaaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtcc 4495719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 19751691 - 19751630
Alignment:
Q  262 gggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttacacaagagg 322  Q
    ||||| ||||||||||| | ||||||||||||||||  |||||||| | |||||||||||||    
T  19751691 gggaaagggtcccaccaataggtgtattgtacgcaaccttaccttgatttttacacaagagg 19751630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 296
Target Start/End: Original strand, 31904906 - 31904935
Alignment:
Q  267 ggggtcccaccatttggtgtattgtacgca 296  Q
    ||||||||||||||||||||||||||||||    
T  31904906 ggggtcccaccatttggtgtattgtacgca 31904935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 39212081 - 39212000
Alignment:
Q  284 tgtattgtacgcaatgttaccttgt-atttacacaagaggttgttttcagaacttaaacccatggcttttcaatcacgtaac 364  Q
    ||||||||||||| | ||||||||| |||||||||||||||| ||| ||| |||| ||||| || | ||||| |||| ||||    
T  39212081 tgtattgtacgcagtcttaccttgttatttacacaagaggttatttccaggacttgaacccgtgacatttcagtcacataac 39212000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 54032569 - 54032614
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtcc 261  Q
    |||||||||||||| ||||||| ||||| |||||||||||| ||||    
T  54032569 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtcc 54032614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 268 - 296
Target Start/End: Original strand, 4495714 - 4495742
Alignment:
Q  268 gggtcccaccatttggtgtattgtacgca 296  Q
    |||||||||||||||||||||||||||||    
T  4495714 gggtcccaccatttggtgtattgtacgca 4495742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 293
Target Start/End: Complemental strand, 24577993 - 24577917
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtac 293  Q
    |||||||||| || |||||||  |||| ||| ||| |||| ||| ||||| || ||||||||||| |||||||||||    
T  24577993 aaaagggcaatccggtgcactagagctcccgtatatgcagggtctgggaaaggatcccaccatttagtgtattgtac 24577917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 293
Target Start/End: Complemental strand, 24578083 - 24578007
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtac 293  Q
    ||||||||||||| |||||||  || | ||||||| | || ||| ||||| | |||||||||||| |||||||||||    
T  24578083 aaaagggcaacccggtgcactagagttcccgcatatgtagggtctgggaaagagtcccaccatttagtgtattgtac 24578007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 54032609 - 54032685
Alignment:
Q  268 gggtcccaccatttggtgtattgtacgcaatgttaccttgtattt-acacaagaggttgttttcagaacttaaaccc 343  Q
    ||||||||||||| ||||||||||| |||   ||||| ||| ||| |||||||||||||||| ||| |||| |||||    
T  54032609 gggtcccaccattcggtgtattgtatgcagccttaccctgttttttacacaagaggttgtttccaggacttgaaccc 54032685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0867 (Bit Score: 142; Significance: 3e-74; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 268 - 496
Target Start/End: Original strand, 3719 - 3939
Alignment:
Q  268 gggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaac 367  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||| |||       ||||||||||    
T  3719 gggtcccaccatttggtgtattgtacgcaacgttaccttgtatttacacaag-ggttgttttcagaacttgaacccatgactt-------acgtaacaac 3810  T
Q  368 attatcgttgcgccaaagnnnnnnntatataaattcctatatctaatctagaaaaataaattaggaagatccgcgcaggaaccaagtacaagactttcta 467  Q
    |||| |||||||||||||       |||||||||||||| ||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  3811 attaccgttgcgccaaagtcccccctatataaattcctaaatctagtctagaaaaataaattaggaagatccgcgcgggtaccaagtacaagactttcta 3910  T
Q  468 tttggattgtatatgacgttttcgttcat 496  Q
    |||||||||||||||||||||||||||||    
T  3911 tttggattgtatatgacgttttcgttcat 3939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 4e-39; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 217 - 343
Target Start/End: Complemental strand, 5648394 - 5648268
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||   ||||| ||| |||||||    
T  5648394 aaaagggcaacccagtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacac 5648295  T
Q  317 aagaggttgttttcagaacttaaaccc 343  Q
    |||||| ||||| ||| |||| |||||    
T  5648294 aagaggctgtttccaggacttgaaccc 5648268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 219 - 343
Target Start/End: Complemental strand, 40915962 - 40915838
Alignment:
Q  219 aagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaa 318  Q
    |||||||| || ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||   ||||||||| |||||||||    
T  40915962 aagggcaatccggtgcactgaagctcccgcatacgcagggtccgggaagggctcccaccatttggtgtattgtacgcagccttaccttgtttttacacaa 40915863  T
Q  319 gaggttgttttcagaacttaaaccc 343  Q
    |||| ||||| ||| |||| |||||    
T  40915862 gaggctgtttccaggacttgaaccc 40915838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 218 - 368
Target Start/End: Complemental strand, 20225117 - 20224968
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacaca 317  Q
    |||||||||||| |||||||  |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||   ||||| ||| ||||||||    
T  20225117 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-tttacaca 20225019  T
Q  318 agaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    ||||||||||| ||| |||| |||||||| | ||||| |||| | ||||||    
T  20225018 agaggttgtttccaggacttgaacccatgacctttcagtcacatgacaaca 20224968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 217 - 342
Target Start/End: Complemental strand, 30639515 - 30639390
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    ||||||||||||||||||||| ||||| ||||||| |||| ||||||||||||||| |||||||||||||||||||||||   ||||| ||| |||||||    
T  30639515 aaaagggcaacccagtgcactaaagctcccgcatatgcagggtccgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttttacac 30639416  T
Q  317 aagaggttgttttcagaacttaaacc 342  Q
    |||||  ||||| ||| |||| ||||    
T  30639415 aagagtctgtttccaggacttgaacc 30639390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 47444093 - 47444014
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||||||||||||||||||||||||| | ||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  47444093 aaaagggcaacccagtgcactgaagctcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgca 47444014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 219 - 328
Target Start/End: Original strand, 6430627 - 6430736
Alignment:
Q  219 aagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaa 318  Q
    ||||||||||| |||| || ||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||   ||||| ||| |||||||||    
T  6430627 aagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaagtggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaa 6430726  T
Q  319 gaggttgttt 328  Q
    |||| |||||    
T  6430727 gaggctgttt 6430736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 217 - 368
Target Start/End: Original strand, 11054147 - 11054297
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    ||||||||||||| |||||||  |||| ||||||| |||| |||||||||||||| || ||||||||||||||||||||| | ||||| ||| |||||||    
T  11054147 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccgccatttggtgtattgtacgcagtcttaccctgt-tttacac 11054245  T
Q  317 aagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    |||||  ||||||||| |||| ||||| || | ||||| |||| | ||||||    
T  11054246 aagagactgttttcaggacttgaacccgtgacctttcagtcacatgacaaca 11054297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 217 - 343
Target Start/End: Original strand, 9832312 - 9832437
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    ||||||||||||| |||||||  || | | ||||| |||| |||||||||||||||||||||||||||||||||||||||   ||||| ||| |||||||    
T  9832312 aaaagggcaacccggtgcactagagttcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-tttacac 9832410  T
Q  317 aagaggttgttttcagaacttaaaccc 343  Q
    |||||| ||||||||| |||| |||||    
T  9832411 aagaggctgttttcaggacttgaaccc 9832437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 217 - 343
Target Start/End: Original strand, 5306659 - 5306789
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccg----catacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtattt 312  Q
    ||||||||||||| ||||| | ||||| |||    ||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||| ||  |||    
T  5306659 aaaagggcaacccggtgcattaaagctcccgtccacatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgatttt 5306758  T
Q  313 acacaagaggttgttttcagaacttaaaccc 343  Q
    |||||||||| ||||| ||| |||| |||||    
T  5306759 acacaagaggctgtttccaggacttgaaccc 5306789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 217 - 328
Target Start/End: Original strand, 20639657 - 20639770
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca-tttggtgtattgtacgcaatgttaccttg-tatttac 314  Q
    ||||||||||||| ||||||| ||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||   ||||| || | |||||    
T  20639657 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttttac 20639756  T
Q  315 acaagaggttgttt 328  Q
    |||||||| |||||    
T  20639757 acaagaggctgttt 20639770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 219 - 321
Target Start/End: Original strand, 7909281 - 7909384
Alignment:
Q  219 aagggcaacccagtgcactgaagctacc-gcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacaca 317  Q
    |||||||||||  |||||| ||||| || |||||||||| || |||||||||||||||||||||||||||||||||||||  ||||| ||| ||||||||    
T  7909281 aagggcaacccgatgcactaaagctccccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgtttttacaca 7909380  T
Q  318 agag 321  Q
    ||||    
T  7909381 agag 7909384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 217 - 368
Target Start/End: Original strand, 48598824 - 48598974
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    ||||||||||||| |||||||  |||| | ||||| |||  |||||||||||||||||||||||||||||||||||||||   ||||| ||| |||||||    
T  48598824 aaaagggcaacccggtgcactagagctccggcatatgcatggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-tttacac 48598922  T
Q  317 aagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    |||||| ||||| ||| |||| ||||| || | ||||| |||| | ||||||    
T  48598923 aagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaaca 48598974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 220 - 322
Target Start/End: Original strand, 29207900 - 29208001
Alignment:
Q  220 agggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaag 319  Q
    |||||||||| |||||||  |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||   ||||| ||| ||||||||||    
T  29207900 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-tttacacaag 29207998  T
Q  320 agg 322  Q
    |||    
T  29207999 agg 29208001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 217 - 322
Target Start/End: Complemental strand, 23501925 - 23501817
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgcaatgttaccttg-tattta 313  Q
    ||||||||||||| ||||||| ||||| ||||||| |||| ||||||||||||||||||||||  ||||||||||||||||||  ||||| || | ||||    
T  23501925 aaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccctgtttttta 23501826  T
Q  314 cacaagagg 322  Q
    |||||||||    
T  23501825 cacaagagg 23501817  T

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Target: chr4; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 217 - 342
Target Start/End: Original strand, 47528529 - 47528653
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    ||||||||||||| |||||||  |||| || ||||  ||| |||||||||||||||||||||||||||||||||||||||   ||||| ||| |||||||    
T  47528529 aaaagggcaacccggtgcactagagctcccacatattcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-tttacac 47528627  T
Q  317 aagaggttgttttcagaacttaaacc 342  Q
    |||||| ||||| ||| |||| ||||    
T  47528628 aagaggctgtttccaggacttgaacc 47528653  T

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Target: chr4; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 217 - 293
Target Start/End: Complemental strand, 25629185 - 25629109
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtac 293  Q
    ||||||||||||| ||||||| ||||| ||||||| | || ||||||||||||||||||||||||||||||||||||    
T  25629185 aaaagggcaacccggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccaccatttggtgtattgtac 25629109  T

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Target: chr4; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 236 - 328
Target Start/End: Complemental strand, 49796914 - 49796822
Alignment:
Q  236 ctgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagaggttgttt 328  Q
    |||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||   ||||| ||| || |||||||||| |||||    
T  49796914 ctgaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccatgttttaacacaagaggctgttt 49796822  T

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Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 217 - 383
Target Start/End: Complemental strand, 54175201 - 54175030
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccggg-aaggggtcccaccattt-ggtgtattgtacgcaatgttaccttgtatttac 314  Q
    ||||||||| ||| ||||||| ||||| ||||||| |||| ||||||| ||||||||||||||||| |||||||||||||||   ||||| ||| |||||    
T  54175201 aaaagggcagcccggtgcactaaagctcccgcatatgcagggtccggggaaggggtcccaccattttggtgtattgtacgcagccttaccctgtttttac 54175102  T
Q  315 acaagaggttgtttt-cagaacttaaacccatggcttttcaatcacgtaacaaca--ttatcgttgcgccaa 383  Q
    |||||||| |||||| ||| |||| || || || | ||||| |||| | ||||||  |||||||||||||||    
T  54175101 acaagaggctgttttccaggacttgaatccgtgacatttcagtcacatgacaacaacttatcgttgcgccaa 54175030  T

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Target: chr4; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 217 - 343
Target Start/End: Original strand, 16408600 - 16408729
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgcaatgttaccttg-tattta 313  Q
    ||||||||||||| ||||||| ||||| ||||||| || | |||||||||||||| |||||||  ||||||||||||||||| | ||||| || | ||||    
T  16408600 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtttttta 16408699  T
Q  314 cacaagaggttgttttcagaacttaaaccc 343  Q
    ||||||||| ||||| ||| |||| |||||    
T  16408700 cacaagaggctgtttccaggacttgaaccc 16408729  T

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Target: chr4; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 328
Target Start/End: Original strand, 51865036 - 51865149
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttac 314  Q
    ||||||||||  || ||||| | ||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||   ||||| || | |||||    
T  51865036 taaaagggcagtccggtgcaataaagctcccgcatacgcagggtccgggaaggggccccaccatttggtgtattgtacgcagccttaccatgttttttac 51865135  T
Q  315 acaagaggttgttt 328  Q
    |||||||| |||||    
T  51865136 acaagaggctgttt 51865149  T

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Target: chr4; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 218 - 328
Target Start/End: Complemental strand, 20405224 - 20405110
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgcaatgttaccttg--tattta 313  Q
    ||||||||||||| |||||| ||||| ||||||| || | ||||||||||||||||||||||  || |||||||||||||||| ||||| ||  | ||||    
T  20405224 aaagggcaacccaatgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattagtgtattgtacgcaatcttaccctgttttttta 20405125  T
Q  314 cacaagaggttgttt 328  Q
    ||||||||| |||||    
T  20405124 cacaagaggctgttt 20405110  T

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Target: chr4; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 38786745 - 38786673
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtatt 289  Q
    ||||||||||||| |||||||  |||| ||||||| |||| ||||||||||||||||||||||||||||||||    
T  38786745 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatt 38786673  T

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Target: chr4; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 368
Target Start/End: Original strand, 39077795 - 39077945
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    |||| |||||||| |||||||  |||| ||||||| |||| |||||| |||  ||| ||||||||||| ||||||||||||  ||||| ||| |||||||    
T  39077795 aaaaaggcaacccggtgcactagagctcccgcatatgcagggtccggaaagatgtctcaccatttggtatattgtacgcaaccttaccctgt-tttacac 39077893  T
Q  317 aagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    |||||| ||||| ||| |||| ||||| || | |||||||||| | ||||||    
T  39077894 aagaggctgtttccaggacttgaacccgtgacctttcaatcacatgacaaca 39077945  T

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Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 218 - 281
Target Start/End: Original strand, 44363130 - 44363193
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccattt 281  Q
    |||||||||||| ||||||| ||||| |||||||||||| ||||||||||||||||||||||||    
T  44363130 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 44363193  T

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Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 14983972 - 14983890
Alignment:
Q  215 ataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaa 297  Q
    |||||||||||||   || |||| ||||| |||||||||||| |||||||||||||||||||||||| |||||||||| ||||    
T  14983972 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttagtgtattgtaggcaa 14983890  T

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Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 231 - 368
Target Start/End: Complemental strand, 19027970 - 19027832
Alignment:
Q  231 gtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttacacaagaggttgtttt 329  Q
    ||||||| ||||| || ||||||||| ||| || |||||||||||||| |||||||||||||||||   ||||| || | ||||||||||| |||||||     
T  19027970 gtgcactaaagctcccacatacgcagagtctggaaaggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacaagatgttgtttc 19027871  T
Q  330 cagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    ||| |||| ||||| || | ||||| |||||| ||||||    
T  19027870 caggacttgaacccgtgacctttcagtcacgtgacaaca 19027832  T

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Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 30352579 - 30352660
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca--tttggtgtattgtacgca 296  Q
    ||||||||||| | ||||||| ||||| |||||||||||| ||||| |||||||||||||||  ||||||||||||||||||    
T  30352579 aaaagggcaacacggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccatttttggtgtattgtacgca 30352660  T

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Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 292
Target Start/End: Original strand, 30690176 - 30690250
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgta 292  Q
    |||||||| ||  ||||||| ||||| |||||||||||| ||||||||||||||||||||| |||||||||||||    
T  30690176 aaagggcagcctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccaattggtgtattgta 30690250  T

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Target: chr4; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 217 - 292
Target Start/End: Original strand, 33836486 - 33836563
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgta 292  Q
    |||||||||||||  |||||| ||||| |||||||||||| ||||||||||||||||||||||  |||||||||||||    
T  33836486 aaaagggcaacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgta 33836563  T

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Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 280
Target Start/End: Original strand, 38755908 - 38755970
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatt 280  Q
    |||||||||||| ||||||| ||||| |||||||||||| |||||||||||||||||||||||    
T  38755908 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 38755970  T

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Target: chr4; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 247 - 383
Target Start/End: Original strand, 17043423 - 17043560
Alignment:
Q  247 gcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgta-tttacacaagaggttgttttcagaacttaaacccat 345  Q
    ||||| |||| ||| |||||||||||||||||||||||||||||||||||   ||||| |||| ||||||||||||| ||||| ||| |||| ||||  |    
T  17043423 gcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgtttccaggacttgaacctgt 17043522  T
Q  346 ggcttttcaatcacgtaacaacattatcgttgcgccaa 383  Q
    | | ||||| |||| | ||||||   ||||||||||||    
T  17043523 gacctttcagtcacttgacaacaacttcgttgcgccaa 17043560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 20225211 - 20225131
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgca 296  Q
    |||||||||||| ||||||| ||||| ||||||| || | ||||||||||||||||||||||  |||||||||||||||||    
T  20225211 aaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgca 20225131  T

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Target: chr4; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 239 - 343
Target Start/End: Complemental strand, 25463236 - 25463131
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttacacaagaggttgttttcagaactt 337  Q
    ||||| ||||||| |||| ||||||||||||||||||||||||||||| ||||||||||  || ||  | | ||||||||||||||||||| ||| ||||    
T  25463236 aagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtgttgtacgcaacctttcccagttttttacacaagaggttgtttccaggactt 25463137  T
Q  338 aaaccc 343  Q
     |||||    
T  25463136 gaaccc 25463131  T

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Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 11394987 - 11394923
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttg 282  Q
    |||||||||||| ||||||| ||||| |||||||||||| |||||| ||||||||||||||||||    
T  11394987 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccatttg 11394923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 11404714 - 11404650
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttg 282  Q
    |||||||||||| ||||||| ||||| |||||||||||| |||||| ||||||||||||||||||    
T  11404714 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccatttg 11404650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 16911702 - 16911619
Alignment:
Q  215 ataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgca 296  Q
    ||||||||||||||| ||  ||| ||||| |||| ||||||| ||||||||||||||||||||||  |||||||||||||||||    
T  16911702 ataaaagggcaacccggtaaactaaagctcccgcgtacgcagggtccgggaaggggtcccaccattattggtgtattgtacgca 16911619  T

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Target: chr4; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 20908635 - 20908715
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca-tttggtgtattgtacgca 296  Q
    ||||||||| ||  ||||||| ||||| |||||||||||| || |||||||||||||||||| ||||||||||||||||||    
T  20908635 aaaagggcagccttgtgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgca 20908715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 293
Target Start/End: Complemental strand, 35567306 - 35567230
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtac 293  Q
    ||||||||| ||| ||||||| ||||| ||||| |||||| || |||||||||||||||||||||||||| ||||||    
T  35567306 aaaagggcagcccggtgcactaaagctcccgcagacgcagggttcgggaaggggtcccaccatttggtgtgttgtac 35567230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 232 - 342
Target Start/End: Complemental strand, 37494972 - 37494861
Alignment:
Q  232 tgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttacacaagaggttgttttc 330  Q
    |||||| ||||| | |||||||||| |||| | |||||||||||||||||||| ||||||| ||||  ||||| || | ||||||||||||||||||| |    
T  37494972 tgcactaaagctcctgcatacgcagggtcccgaaaggggtcccaccatttggtatattgtatgcaaccttaccctgttttttacacaagaggttgtttcc 37494873  T
Q  331 agaacttaaacc 342  Q
    || |||| ||||    
T  37494872 aggacttgaacc 37494861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 223 - 296
Target Start/End: Complemental strand, 21489218 - 21489144
Alignment:
Q  223 gcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca-tttggtgtattgtacgca 296  Q
    ||||||||||||||  ||||| |||||||||||| || |||||||||||||||||| ||||||| ||||||||||    
T  21489218 gcaacccagtgcacgaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgcattgtacgca 21489144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 217 - 279
Target Start/End: Complemental strand, 32484369 - 32484307
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat 279  Q
    ||||||||||||| ||||||| ||||| ||||||| |||| ||||||||||||||||||||||    
T  32484369 aaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccat 32484307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 279
Target Start/End: Original strand, 40553937 - 40553998
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat 279  Q
    |||||||||||| ||||||| ||||| |||||||||||| ||||||||||||||| ||||||    
T  40553937 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcacaccat 40553998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 368
Target Start/End: Original strand, 41018803 - 41018944
Alignment:
Q  227 cccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagaggttgt 326  Q
    ||||||||||| ||||  |  ||||||||  ||| ||||||||||||||| ||||||||||||||||| |   ||||| |   |||||||||||||||||    
T  41018803 cccagtgcactaaagcccctccatacgcaaggtctgggaaggggtcccactatttggtgtattgtacgtagccttaccctaattttacacaagaggttgt 41018902  T
Q  327 tttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    || ||| |||| ||||| || | ||||| |||||| ||||||    
T  41018903 ttccaggacttgaacccgtgacctttcagtcacgtgacaaca 41018944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 294
Target Start/End: Complemental strand, 7038189 - 7038111
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca-tttggtgtattgtacg 294  Q
    |||||||||||||||||||||| ||||| ||| |||||||| ||||||| ||| | ||||||| ||||||||||||||||    
T  7038189 taaaagggcaacccagtgcactaaagct-ccgtatacgcagggtccgggtaggtgccccaccattttggtgtattgtacg 7038111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 292
Target Start/End: Original strand, 8473621 - 8473696
Alignment:
Q  219 aagggcaacccagtgcactgaagctaccgcatacgcagtg-tccggg-aaggggtcccaccatttggtgtattgta 292  Q
    ||||||||||| ||||||| ||||| ||||||| |||| | |||||| ||||||||||||||||||||||||||||    
T  8473621 aagggcaacccggtgcactaaagctcccgcatatgcaggggtccggggaaggggtcccaccatttggtgtattgta 8473696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 32478792 - 32478862
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtatt 289  Q
    ||||||| |||| ||||||  ||||| |||||||||| | ||||||||||||||||||||||||||||||||    
T  32478792 aaagggccacccggtgcaca-aagctcccgcatacgctgggtccgggaaggggtcccaccatttggtgtatt 32478862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 218 - 280
Target Start/End: Complemental strand, 25388311 - 25388249
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatt 280  Q
    |||||||||||| ||||||| |||||   |||||||||| |||||||||||||||||||||||    
T  25388311 aaagggcaacccggtgcactaaagctcatgcatacgcagggtccgggaaggggtcccaccatt 25388249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 36816383 - 36816463
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacc-atttggtgtattgtacgca 296  Q
    ||||||||||||| || |||| ||||| |||||||| ||| |||| |||||| ||||||||  ||||||||||||||||||    
T  36816383 aaaagggcaacccggtacactaaagctcccgcatacacagggtccaggaaggagtcccacctttttggtgtattgtacgca 36816463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 35532128 - 35532077
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaagg 268  Q
    ||||||||||||| ||||||| ||||| |||||||||||| |||||||||||    
T  35532128 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaagg 35532077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 54967134 - 54967036
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttacacaagaggttgttttcagaactt 337  Q
    ||||| ||||||| | || || |||||||||||||||||||||||| ||||||| ||||  ||||| || | ||||||||||||||| ||| ||||||||    
T  54967134 aagctcccgcatatgtagggtacgggaaggggtcccaccatttggtatattgta-gcaaccttaccctgttttttacacaagaggttctttccagaactt 54967036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 13256398 - 13256479
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgca 296  Q
    ||||||||||||| ||||||| ||||| ||||| | || | || |||||||||||||||| ||  |||||||||||||||||    
T  13256398 aaaagggcaacccggtgcactaaagctcccgcagatgcggggttcgggaaggggtcccactattattggtgtattgtacgca 13256479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 296
Target Start/End: Complemental strand, 21647098 - 21647021
Alignment:
Q  221 gggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgca 296  Q
    ||||||||| ||||||| ||||| ||||||| || | ||| ||||||||||||||||||  ||||| |||||||||||    
T  21647098 gggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatattgtacgca 21647021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 47482871 - 47482913
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccaccattt 281  Q
    ||||| |||||||||||| ||||||||||||||||||||||||    
T  47482871 aagctcccgcatacgcagggtccgggaaggggtcccaccattt 47482913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 55766466 - 55766544
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    |||||||| ||| ||||||| |||||  ||||||||||  |||||||| ||||| ||||||||  ||||||||||||||    
T  55766466 aaagggcatcccggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgca 55766544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 245 - 290
Target Start/End: Original strand, 7385503 - 7385548
Alignment:
Q  245 ccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattg 290  Q
    |||||||| ||| ||||||||| |||||||||||||||||||||||    
T  7385503 ccgcatacacagggtccgggaaagggtcccaccatttggtgtattg 7385548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 217 - 337
Target Start/End: Original strand, 9987833 - 9987954
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgtta-ccttgtatttaca 315  Q
    |||| |||| ||| ||||| | ||||| ||||||| |||  |||  |||||||||||||||||||||||||||||| |||   ||| |||  | ||||||    
T  9987833 aaaaaggcagcccggtgcattaaagctcccgcatatgcaaggtcaaggaaggggtcccaccatttggtgtattgtatgcagccttaccctattgtttaca 9987932  T
Q  316 caagaggttgttttcagaactt 337  Q
    ||||||||||||| ||| ||||    
T  9987933 caagaggttgtttccaggactt 9987954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 218 - 279
Target Start/End: Complemental strand, 44718702 - 44718641
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat 279  Q
    |||||||||||| |||  || ||||| |||||||||||| ||| ||||||||||||||||||    
T  44718702 aaagggcaacccggtgtgctaaagctcccgcatacgcagggtctgggaaggggtcccaccat 44718641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 10379997 - 10380053
Alignment:
Q  272 cccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagaggttgttt 328  Q
    ||||| ||||||||||||||||||||| ||| | | | |||||||||||||||||||    
T  10379997 cccactatttggtgtattgtacgcaattttatcctatttttacacaagaggttgttt 10380053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 248 - 328
Target Start/End: Original strand, 30581495 - 30581578
Alignment:
Q  248 catacgcagtgtccgggaaggggtcccacca-tttggtgtattgtacgcaatgttaccttg--tatttacacaagaggttgttt 328  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||||| ||   ||||| ||  | |||||||||||||||||||    
T  30581495 catatgcagggtccgggaaggggtcccaccattttggtgtattgtacacacccttaccctgtttttttacacaagaggttgttt 30581578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 296
Target Start/End: Complemental strand, 54730374 - 54730307
Alignment:
Q  231 gtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgca 296  Q
    ||||||| ||||| |||||||||||| |||||||||||||| ||| |||  |||||||||| ||||||    
T  54730374 gtgcactaaagctcccgcatacgcagggtccgggaaggggttccatcattattggtgtattatacgca 54730307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 296
Target Start/End: Original strand, 10277784 - 10277835
Alignment:
Q  245 ccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||||| |||| ||| ||||||||||  |||||||||||||||||||||||    
T  10277784 ccgcatatgcagggtctgggaaggggtttcaccatttggtgtattgtacgca 10277835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 293
Target Start/End: Original strand, 47441570 - 47441605
Alignment:
Q  258 gtccgggaaggggtcccaccatttggtgtattgtac 293  Q
    |||||||||||||||| |||||||||||||||||||    
T  47441570 gtccgggaaggggtccaaccatttggtgtattgtac 47441605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 280
Target Start/End: Original strand, 50555655 - 50555718
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatt 280  Q
    ||||||||| ||| ||||||| || || | |||||||||| |||||||||||||| ||||||||    
T  50555655 aaaagggcagcccggtgcactaaaactcctgcatacgcagggtccgggaaggggttccaccatt 50555718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 210 - 296
Target Start/End: Original strand, 12711441 - 12711527
Alignment:
Q  210 attttataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    |||||| | |||||||||   ||||||| ||| | ||||||||||   ||| | ||||||||||| |||||||||||||||||||||    
T  12711441 attttagagaagggcaactgggtgcactaaagtttccgcatacgctaggtctgagaaggggtcccgccatttggtgtattgtacgca 12711527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 296
Target Start/End: Original strand, 35894502 - 35894540
Alignment:
Q  259 tccgggaaggggtcccacca-tttggtgtattgtacgca 296  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  35894502 tccgggaaggggtcccaccattttggtgtattgtacgca 35894540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 55830721 - 55830799
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    |||||||| ||  ||||||| |||||  ||||||||||  |||||||| ||||| ||||||||  ||||||||||||||    
T  55830721 aaagggcatcctggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgca 55830799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 310 - 358
Target Start/End: Complemental strand, 41549424 - 41549376
Alignment:
Q  310 tttacacaagaggttgttttcagaacttaaacccatggcttttcaatca 358  Q
    ||||||||||||||||||| |||||||| ||||| || | |||||||||    
T  41549424 tttacacaagaggttgtttccagaacttgaacccgtgacatttcaatca 41549376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 4e-36; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 219 - 368
Target Start/End: Complemental strand, 45071398 - 45071249
Alignment:
Q  219 aagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaa 318  Q
    ||||||||||| ||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||   ||||| ||| |||||||||    
T  45071398 aagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaa 45071299  T
Q  319 gaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    |||| ||||| |||||||| ||||| || | || ||||||| | ||||||    
T  45071298 gaggctgtttccagaacttgaacccgtgaccttacaatcacatgacaaca 45071249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 218 - 328
Target Start/End: Complemental strand, 13160836 - 13160726
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacaca 317  Q
    |||||||||||| | ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||   ||||| ||| ||||||||    
T  13160836 aaagggcaacccggcgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacaca 13160737  T
Q  318 agaggttgttt 328  Q
    ||||| |||||    
T  13160736 agaggctgttt 13160726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 215 - 343
Target Start/End: Complemental strand, 36720934 - 36720805
Alignment:
Q  215 ataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tattta 313  Q
    ||||||||||||||  ||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||   ||||| || | ||||    
T  36720934 ataaaagggcaaccgggtgcactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttta 36720835  T
Q  314 cacaagaggttgttttcagaacttaaaccc 343  Q
    ||||||||| ||||| ||| |||| |||||    
T  36720834 cacaagaggctgtttccaggacttgaaccc 36720805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 216 - 337
Target Start/End: Complemental strand, 12626027 - 12625904
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg--tattta 313  Q
    |||||||||||||| ||||||| ||||| |||||||||||| |||||||| |||||||||||||||||||||||||| ||| | ||||| ||  | ||||    
T  12626027 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggagggggtcccaccatttggtgtattgtatgcagtcttaccctgttttttta 12625928  T
Q  314 cacaagaggttgttttcagaactt 337  Q
    ||||||||||||||| ||| ||||    
T  12625927 cacaagaggttgtttccaggactt 12625904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 217 - 368
Target Start/End: Original strand, 30454096 - 30454246
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    ||||||||||||| |||||||  |||| ||||||| |||| ||||||||||||||||||||||||||||||| |||||||   ||||||||| |||||||    
T  30454096 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatcgtacgcagccttaccttgt-tttacac 30454194  T
Q  317 aagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    |||||| ||||| ||| |||| ||||| || | ||||| |||| | ||||||    
T  30454195 aagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaaca 30454246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 215 - 328
Target Start/End: Complemental strand, 44530287 - 44530173
Alignment:
Q  215 ataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tattta 313  Q
    |||||||| |||||| ||||||| ||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||   ||||| || | ||||    
T  44530287 ataaaaggtcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttta 44530188  T
Q  314 cacaagaggttgttt 328  Q
    |||||||||||||||    
T  44530187 cacaagaggttgttt 44530173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 217 - 321
Target Start/End: Complemental strand, 35261815 - 35261710
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttaca 315  Q
    ||||||||||||| ||||||| ||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||  ||||| || | ||||||    
T  35261815 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttttaca 35261716  T
Q  316 caagag 321  Q
    ||||||    
T  35261715 caagag 35261710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 217 - 368
Target Start/End: Original strand, 12670249 - 12670399
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    ||||||| ||||| |||||||  |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||   ||||| ||| |||||||    
T  12670249 aaaagggtaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-tttacac 12670347  T
Q  317 aagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    |||||| ||||| ||| |||| ||||| || | ||||| |||| | ||||||    
T  12670348 aagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaaca 12670399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 217 - 343
Target Start/End: Original strand, 28817625 - 28817752
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttaca 315  Q
    |||||||||||||  |||||| ||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||   ||||| || | ||||||    
T  28817625 aaaagggcaacccgatgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattgggtgtattgtacgcagccttaccctgttttttaca 28817724  T
Q  316 caagaggttgttttcagaacttaaaccc 343  Q
    ||||||| ||||| ||| |||| |||||    
T  28817725 caagaggctgtttccaggacttgaaccc 28817752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 217 - 368
Target Start/End: Original strand, 18164759 - 18164910
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    |||| |||||||| ||||||| ||||| |||||||||||| |||||||||  |||| || | |||||||||||||||||||  ||||| ||| |||||||    
T  18164759 aaaatggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaatggtcacatcctttggtgtattgtacgcaaccttaccctgtttttacac 18164858  T
Q  317 aagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    |||||| ||||| ||| |||| ||||| || | ||||| |||| | ||||||    
T  18164859 aagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaaca 18164910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 217 - 346
Target Start/End: Original strand, 7136526 - 7136658
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgcaatgtta-ccttgtattta 313  Q
    ||||||| ||||| ||||||| ||||| ||||||| || | ||||||||||||||||||||||  |||||||||||||||||   ||| ||| || ||||    
T  7136526 aaaagggtaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctggttttta 7136625  T
Q  314 cacaagaggttgttttcagaacttaaacccatg 346  Q
    ||||||||||||||| ||| |||| ||||||||    
T  7136626 cacaagaggttgtttccaggacttgaacccatg 7136658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 214 - 296
Target Start/End: Original strand, 39460990 - 39461074
Alignment:
Q  214 tataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgca 296  Q
    |||||||||||||||| ||||||| ||||| |||||||||||| ||||||||||||||| ||||||  |||||||||||||||||    
T  39460990 tataaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgca 39461074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 292
Target Start/End: Complemental strand, 26102653 - 26102578
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgta 292  Q
    ||||||||||||| |||||||  |||| ||||||| |||| |||||||||||||||||||||||||||||||||||    
T  26102653 aaaagggcaacccggtgcactagagctcccgcataagcagggtccgggaaggggtcccaccatttggtgtattgta 26102578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 218 - 343
Target Start/End: Complemental strand, 17823711 - 17823585
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgtta-ccttgtatttacac 316  Q
    |||||||||||| ||||||| ||||| | ||||| |||| || ||||||||||| ||||||||||||||||| |||||| | ||| ||| || |||||||    
T  17823711 aaagggcaacccggtgcactaaagctcctgcatatgcagggttcgggaaggggttccaccatttggtgtattttacgcagtcttatcctggtttttacac 17823612  T
Q  317 aagaggttgttttcagaacttaaaccc 343  Q
    |||||| ||||| ||| |||| |||||    
T  17823611 aagaggctgtttccaggacttgaaccc 17823585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 215 - 293
Target Start/End: Complemental strand, 19729478 - 19729400
Alignment:
Q  215 ataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtac 293  Q
    |||||||||||| ||||||||||  |||| ||| ||| |||| ||||||||||||||||||||||||||||||||||||    
T  19729478 ataaaagggcaatccagtgcactagagctcccgtatatgcagggtccgggaaggggtcccaccatttggtgtattgtac 19729400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 217 - 294
Target Start/End: Original strand, 8897763 - 8897840
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacg 294  Q
    ||||||||||||  ||||| | ||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  8897763 aaaagggcaaccgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacg 8897840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 231 - 296
Target Start/End: Complemental strand, 29877216 - 29877151
Alignment:
Q  231 gtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||||| | ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  29877216 gtgcactaacgctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgca 29877151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 218 - 343
Target Start/End: Complemental strand, 2626657 - 2626528
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttacc----ttgtattta 313  Q
    ||||||||| |  ||||||||||||| ||||||| |||| ||| |||||||||||||| |||||||||||||||||||| | |||||    || | ||||    
T  2626657 aaagggcaatctggtgcactgaagctcccgcatatgcagggtctgggaaggggtcccatcatttggtgtattgtacgcagtcttaccctgttttttttta 2626558  T
Q  314 cacaagaggttgttttcagaacttaaaccc 343  Q
    ||||||||| ||||| ||| |||| |||||    
T  2626557 cacaagaggctgtttccaggacttgaaccc 2626528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 29521685 - 29521763
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    |||| ||||||| ||||||| ||||| |||||||||||| ||| |||| ||| ||||||||||||||||||||||||||    
T  29521685 aaagagcaacccggtgcactaaagctcccgcatacgcagggtctgggatgggttcccaccatttggtgtattgtacgca 29521763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 216 - 343
Target Start/End: Complemental strand, 26954272 - 26954141
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgcaatgttaccttg--tatt 311  Q
    |||||||||||||||||||||| ||||| ||||||| ||   ||| ||||||||||||||||||  |||||||||||||||||   ||||| ||  | ||    
T  26954272 taaaagggcaacccagtgcactaaagctcccgcatatgcgaggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 26954173  T
Q  312 tacacaagaggttgttttcagaacttaaaccc 343  Q
    ||||||||||| ||||| ||| |||| |||||    
T  26954172 tacacaagaggctgtttccaggacttgaaccc 26954141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 214 - 343
Target Start/End: Complemental strand, 31457311 - 31457182
Alignment:
Q  214 tataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtattta 313  Q
    ||||||||||||| || |||||||  |||| |||||||||||| ||  |||||||||||| |||||||| |||||||||||||   ||  | | | ||||    
T  31457311 tataaaagggcaatccggtgcactagagctcccgcatacgcagggtttgggaaggggtcctaccatttgatgtattgtacgcagccttttcctattttta 31457212  T
Q  314 cacaagaggttgttttcagaacttaaaccc 343  Q
    ||||||||||||||| ||| |||| |||||    
T  31457211 cacaagaggttgtttacaggacttgaaccc 31457182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 293
Target Start/End: Original strand, 5135289 - 5135364
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtac 293  Q
    ||||||||| ||| ||||||  ||||| | |||||||||| ||||||||||||||||||||||||||||||||||||    
T  5135289 aaaagggcagcccggtgcaca-aagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtac 5135364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 346
Target Start/End: Original strand, 8483959 - 8484067
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttacacaagaggttgttttcagaactt 337  Q
    ||||| |||||||||||| ||| |||| |||||||||||| |||||||||||||||||   || || || | ||||||||||||||||||| ||| ||||    
T  8483959 aagctcccgcatacgcagggtctgggatggggtcccaccaattggtgtattgtacgcagccttgccctgttttttacacaagaggttgtttccaggactt 8484058  T
Q  338 aaacccatg 346  Q
     ||||||||    
T  8484059 gaacccatg 8484067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 281
Target Start/End: Original strand, 35107310 - 35107374
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccattt 281  Q
    ||||||||||||| ||||||| ||||| |||||||| ||| ||||||||||||||||||||||||    
T  35107310 aaaagggcaacccggtgcactaaagcttccgcatacacagcgtccgggaaggggtcccaccattt 35107374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 10857965 - 10857886
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||||||||||| ||||||| ||||| |||||||||||  |||| ||||| |||||||||| |||||||||||| ||||    
T  10857965 aaaagggcaacccggtgcactaaagctcccgcatacgcaaggtccaggaagtggtcccaccaattggtgtattgtgcgca 10857886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 224 - 296
Target Start/End: Original strand, 20284075 - 20284149
Alignment:
Q  224 caacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgca 296  Q
    |||||| ||||||| || || |||||||||||| ||||||||||||||||||||||  |||||||||||||||||    
T  20284075 caacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgca 20284149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 224 - 296
Target Start/End: Original strand, 21070703 - 21070777
Alignment:
Q  224 caacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgca 296  Q
    |||||| ||||||| || || |||||||||||| ||||||||||||||||||||||  |||||||||||||||||    
T  21070703 caacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgca 21070777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 259 - 338
Target Start/End: Original strand, 23000260 - 23000339
Alignment:
Q  259 tccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagaggttgttttcagaactta 338  Q
    |||||||||||||||||||||||||||||||||| | ||  ||||| ||| ||||||||||||| ||||| ||| |||||    
T  23000260 tccgggaaggggtcccaccatttggtgtattgtatggaaccttaccgtgtttttacacaagaggctgtttccaggactta 23000339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 218 - 285
Target Start/End: Complemental strand, 28407538 - 28407471
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtg 285  Q
    |||||||||||| ||||| | ||||| ||||||||| || ||||||||||||||||||||||||||||    
T  28407538 aaagggcaacccggtgcagtaaagctcccgcatacgtagggtccgggaaggggtcccaccatttggtg 28407471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 217 - 343
Target Start/End: Complemental strand, 6760960 - 6760831
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgcaatgttaccttg-tattta 313  Q
    ||||||||||||| ||||||| ||||| ||||||| || | ||||| ||||||||||||||||  ||||||||||||||| |   ||||| || | ||||    
T  6760960 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgagaaggggtcccaccattattggtgtattgtacgaagccttaccctgtttttta 6760861  T
Q  314 cacaagaggttgttttcagaacttaaaccc 343  Q
    ||||||||| ||||| ||| |||| |||||    
T  6760860 cacaagaggctgtttccaggacttgaaccc 6760831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 228 - 383
Target Start/End: Original strand, 14017978 - 14018138
Alignment:
Q  228 ccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacc-atttggtgtattgtacgcaatgttaccttg-tatttacacaagaggttg 325  Q
    |||||| ||| ||||||||||||  |||| |||| ||||| ||||||||| |||| |||||||||||||| | | ||| || | ||||||||||||  ||    
T  14017978 ccagtgaacttaagctaccgcatctgcagggtccaggaagtggtcccaccaatttagtgtattgtacgcagtctcaccctgttttttacacaagagactg 14018077  T
Q  326 ttttcagaacttaaacccatggcttttcaatcacgt---aacaacattatcgttgcgccaa 383  Q
    ||| ||  |||| |||||||| | ||||||||||||   |||||||||| |||||||||||    
T  14018078 tttccaagacttgaacccatgacctttcaatcacgtgacaacaacattaccgttgcgccaa 14018138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 20870061 - 20869980
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgca 296  Q
    ||||||||||||| ||||||| ||||| ||||||| || | |||| |||||||||||||||||  |||||||||||||||||    
T  20870061 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtcctggaaggggtcccaccattattggtgtattgtacgca 20869980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 24365080 - 24365137
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||| || ||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  24365080 aagctcccacatacgcagggtccgggaaggggtcccaccatttggtgtattgttcgca 24365137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 220 - 368
Target Start/End: Original strand, 44781506 - 44781657
Alignment:
Q  220 agggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca--tttggtgtattgtacgcaatgttaccttgt-atttacac 316  Q
    |||||| | ||||||||| ||||| |||||||||||| ||| |||| ||||||||| ||  ||||||||||||||| ||   ||||| |||  |||||||    
T  44781506 agggcagcacagtgcactaaagctcccgcatacgcagggtctgggacggggtcccaacatttttggtgtattgtacacagccttaccctgtcttttacac 44781605  T
Q  317 aagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    |||||||||||| ||| |||| ||||| ||   ||||| |||||| ||||||    
T  44781606 aagaggttgtttccaggacttgaacccgtgaactttcagtcacgtgacaaca 44781657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 25250660 - 25250579
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgca 296  Q
    ||||||||||||| ||||||| || || ||||||| || | || |||||||||||||||||||  |||||||||||||||||    
T  25250660 aaaagggcaacccggtgcactaaatctcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattgtacgca 25250579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 343
Target Start/End: Complemental strand, 389767 - 389652
Alignment:
Q  231 gtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtattt---acacaagaggttgtt 327  Q
    ||||||| |||||  ||||||||||| ||| || ||||| ||||| |||||||||||||||||||||  ||||| ||| |||   |||||||||| ||||    
T  389767 gtgcactaaagctctcgcatacgcagggtcaggaaagggatcccatcatttggtgtattgtacgcaaccttaccctgtttttttgacacaagagggtgtt 389668  T
Q  328 ttcagaacttaaaccc 343  Q
    | ||| |||| |||||    
T  389667 tccaggacttgaaccc 389652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 296
Target Start/End: Complemental strand, 5689753 - 5689688
Alignment:
Q  231 gtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||||| ||||| || ||||||||  || ||||||||||| ||||||||||||||||||||||||    
T  5689753 gtgcactaaagctcccacatacgcatggttcgggaaggggttccaccatttggtgtattgtacgca 5689688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 16225156 - 16225076
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgca 296  Q
    ||||| |||||| ||||||| ||||| ||||||| || | |||||||||||| |||||||||  |||||||||||||||||    
T  16225156 aaaggacaacccggtgcactaaagctcccgcatatgcggggtccgggaagggatcccaccattattggtgtattgtacgca 16225076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 298
Target Start/End: Complemental strand, 16013592 - 16013509
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca--tttggtgtattgtacgcaat 298  Q
    |||||| |||||| ||||||| ||||| ||||||| |||| ||| ||||||||||| |||||  ||| ||||||||||||||||    
T  16013592 aaaaggacaacccggtgcactaaagctcccgcataggcagggtctgggaaggggtcgcaccatttttagtgtattgtacgcaat 16013509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 27508044 - 27507985
Alignment:
Q  219 aagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca 278  Q
    |||| |||||| ||||||| ||||| |||||||||||| || ||||||||||||||||||    
T  27508044 aaggacaacccggtgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca 27507985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 368
Target Start/End: Original strand, 11000949 - 11001101
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg--tatttac 314  Q
    ||||||||| |||| ||||| |||||| | |||||  ||| || |||| |||||||||||||||||||||||||||| ||   ||| ||||  | |||||    
T  11000949 aaaagggcagcccaatgcac-gaagctcctgcataaacagggttcgggtaggggtcccaccatttggtgtattgtacacagccttatcttgtttttttac 11001047  T
Q  315 acaagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    |||  ||||||||||||||| || |||||  | | |||||||||| | ||||||    
T  11001048 acagtaggttgttttcagaatttgaacccgcgacctttcaatcacatgacaaca 11001101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 267
Target Start/End: Original strand, 27468091 - 27468141
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaag 267  Q
    ||||||||||||| ||||||| ||||| |||||||||||| ||||||||||    
T  27468091 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaag 27468141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 221 - 360
Target Start/End: Original strand, 44742521 - 44742662
Alignment:
Q  221 gggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca-tttggtgtattgtacgcaatgttaccttg-tatttacacaa 318  Q
    ||||| ||| ||||||| | ||| |||||| || || ||||  ||||||||||||||| ||||||||||||||||||   ||||| || | ||||||||     
T  44742521 gggcaccccggtgcactaatgctcccgcatccgtagggtccaagaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttttacacag 44742620  T
Q  319 gaggttgttttcagaacttaaacccatggcttttcaatcacg 360  Q
    ||| |||||| |||||||| ||| |||| | || ||||||||    
T  44742621 gagattgtttccagaacttgaactcatgaccttacaatcacg 44742662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 245 - 368
Target Start/End: Original strand, 20869527 - 20869647
Alignment:
Q  245 ccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagaggttgttttcagaacttaaaccca 344  Q
    ||||||| |||| ||||||||||||||| ||||  |||||||||||||| ||   ||||| ||| ||||||||||||| ||||| ||| |||| |||||     
T  20869527 ccgcatatgcagggtccgggaaggggtctcacc--ttggtgtattgtacacagccttaccctgt-tttacacaagaggctgtttccaggacttgaacccg 20869623  T
Q  345 tggcttttcaatcacgtaacaaca 368  Q
    || | ||||| |||| | ||||||    
T  20869624 tgacctttcagtcacatgacaaca 20869647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 322
Target Start/End: Original strand, 23286375 - 23286428
Alignment:
Q  268 gggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagagg 322  Q
    |||||||||||||||||||||||||||||   ||||| ||| |||||||||||||    
T  23286375 gggtcccaccatttggtgtattgtacgcagctttaccctgt-tttacacaagagg 23286428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 295
Target Start/End: Original strand, 17250879 - 17250954
Alignment:
Q  221 gggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgc 295  Q
    ||||||||| ||||||| ||||| |  ||||||||| || |||||| ||||||||||||  ||||||||||||||||    
T  17250879 gggcaaccc-gtgcactaaagctccttcatacgcagggttcgggaaagggtcccaccattattggtgtattgtacgc 17250954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 22598265 - 22598217
Alignment:
Q  245 ccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtac 293  Q
    |||||||||||  ||||||||| ||||| ||||| ||||||||||||||    
T  22598265 ccgcatacgcaaggtccgggaaagggtctcaccaattggtgtattgtac 22598217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 296
Target Start/End: Complemental strand, 26457855 - 26457786
Alignment:
Q  225 aacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||| ||||||| ||||| || ||||||||  ||| ||  ||||||||||||| |||||||||||||||||    
T  26457855 aacccggtgcactaaagctccctcatacgcaaggtcagg--aggggtcccaccaattggtgtattgtacgca 26457786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 36486567 - 36486627
Alignment:
Q  219 aagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat 279  Q
    ||||||||||| | ||||| ||||| | |||||||||  |||||||||| |||||||||||    
T  36486567 aagggcaacccggggcactaaagctcctgcatacgcaaggtccgggaagaggtcccaccat 36486627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 6e-35; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 217 - 343
Target Start/End: Complemental strand, 7879774 - 7879647
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttaca 315  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||   |||||||| | ||||||    
T  7879774 aaaagggcaacccggtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgttttttaca 7879675  T
Q  316 caagaggttgttttcagaacttaaaccc 343  Q
    |||||| |||||| ||| |||| |||||    
T  7879674 caagagattgtttccaggacttgaaccc 7879647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 217 - 343
Target Start/End: Complemental strand, 27629770 - 27629643
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttaca 315  Q
    ||||||||||||| ||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||| |||||||  ||||| || | ||||||    
T  27629770 aaaagggcaacccggtgcactgaagctaccgcatatgcagggcccgggaaggggtcccaccatttggtgtattttacgcaaccttaccctgttttttaca 27629671  T
Q  316 caagaggttgttttcagaacttaaaccc 343  Q
    ||||||| ||||| ||| |||| |||||    
T  27629670 caagaggctgtttccaggacttgaaccc 27629643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 216 - 327
Target Start/End: Original strand, 35787267 - 35787378
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttaca 315  Q
    |||||||||||||| ||||| ||||||| |||||||||||  ||||||||||||||||| ||||||||||||||||||||||  ||||| ||| ||||||    
T  35787267 taaaagggcaacccggtgcattgaagctcccgcatacgcaaggtccgggaaggggtcccgccatttggtgtattgtacgcaaccttaccatgtttttaca 35787366  T
Q  316 caagaggttgtt 327  Q
    ||||||| ||||    
T  35787367 caagaggctgtt 35787378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 215 - 343
Target Start/End: Original strand, 18512450 - 18512578
Alignment:
Q  215 ataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttac 314  Q
    |||| |||||||||||||||||  ||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||   ||||| | | |||||    
T  18512450 ataacagggcaacccagtgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttac 18512549  T
Q  315 acaagaggttgttttcagaacttaaaccc 343  Q
    |||||| ||||||| ||| |||| |||||    
T  18512550 acaagatgttgtttccaggacttgaaccc 18512578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 216 - 343
Target Start/End: Original strand, 21172007 - 21172133
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttaca 315  Q
    |||||||||||||| |||||||  |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||   ||||| ||| ||||||    
T  21172007 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-tttaca 21172105  T
Q  316 caagaggttgttttcagaacttaaaccc 343  Q
    ||||||| ||||| ||| |||| |||||    
T  21172106 caagaggctgtttccaggacttgaaccc 21172133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 218 - 368
Target Start/End: Original strand, 10693073 - 10693222
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacaca 317  Q
    ||||||||||||||||||||  |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||   ||||| | | ||||||||    
T  10693073 aaagggcaacccagtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctct-tttacaca 10693171  T
Q  318 agaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    ||||| ||||| ||| |||| ||||| || | ||||| |||| | ||||||    
T  10693172 agaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaaca 10693222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 218 - 328
Target Start/End: Original strand, 48735122 - 48735231
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacaca 317  Q
    |||||||||||| |||||||  |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||   ||||| ||| ||||||||    
T  48735122 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccgtgt-tttacaca 48735220  T
Q  318 agaggttgttt 328  Q
    |||||||||||    
T  48735221 agaggttgttt 48735231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 219 - 342
Target Start/End: Original strand, 11617589 - 11617713
Alignment:
Q  219 aagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttacaca 317  Q
    ||||||||||| ||||||| ||| | | |||||||||| |||| |||||||||||||||||||||||||||||||||| | ||||| || | ||||||||    
T  11617589 aagggcaacccggtgcactaaaggtcctgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacaca 11617688  T
Q  318 agaggttgttttcagaacttaaacc 342  Q
    ||||||||||| ||| |||| ||||    
T  11617689 agaggttgtttccaggacttgaacc 11617713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 217 - 368
Target Start/End: Original strand, 42391099 - 42391249
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    ||||||||||||| |||||||  |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||   ||||| ||| |||||||    
T  42391099 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-tttacac 42391197  T
Q  317 aagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    |||| | ||||| ||| |||| ||||| || | ||||| |||| | ||||||    
T  42391198 aagaagctgtttccaggacttgaacccgtgacctttcagtcacatgacaaca 42391249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 217 - 342
Target Start/End: Complemental strand, 32758395 - 32758271
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    ||||||||||||| |||||||  |||| ||||||| |||| |||||||||||||||||||||||||||||||||||| ||   ||||| ||| |||||||    
T  32758395 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctgt-tttacac 32758297  T
Q  317 aagaggttgttttcagaacttaaacc 342  Q
    |||||| ||||| ||| |||| ||||    
T  32758296 aagaggctgtttccaggacttgaacc 32758271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 216 - 321
Target Start/End: Complemental strand, 40464013 - 40463908
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttaca 315  Q
    |||||||||||| | ||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||   |||||  || ||||||    
T  40464013 taaaagggcaactcggtgcactgaagctcccgcatacgcagggtccgagaaggggtcccaccatttggtgtattatacgcagccttacccagtttttaca 40463914  T
Q  316 caagag 321  Q
    ||||||    
T  40463913 caagag 40463908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 27889315 - 27889394
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||||||||||| ||| ||  ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  27889315 aaaagggcaacccggtgtaccaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgca 27889394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 217 - 368
Target Start/End: Original strand, 34626207 - 34626358
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    |||||||||||||  || ||| ||||| |||||||||||| |||||||||||| |||||||||||||||||||| |||||   ||||| ||| |||||||    
T  34626207 aaaagggcaacccgatgaactaaagctcccgcatacgcagggtccgggaagggatcccaccatttggtgtattgaacgcagccttaccctgtttttacac 34626306  T
Q  317 aagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    | |||| ||||| ||| |||| || |  |||| |||||||||| | ||||||    
T  34626307 aggaggctgtttccaggacttgaatctgtggcctttcaatcacatgacaaca 34626358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 343
Target Start/End: Original strand, 2541019 - 2541145
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttacac 316  Q
    |||||| ||||| ||||||| ||||| |||||||||||| | ||||||||||||||||||||||||||||| |||||||   ||||| || | |||||||    
T  2541019 aaagggaaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccatttggtgtatagtacgcagccttaccctgttttttacac 2541118  T
Q  317 aagaggttgttttcagaacttaaaccc 343  Q
    |||||| ||||| ||| |||| |||||    
T  2541119 aagaggctgtttccaggacttgaaccc 2541145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 222 - 343
Target Start/End: Original strand, 33871914 - 33872035
Alignment:
Q  222 ggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagag 321  Q
    |||||||  ||||||| |||||  ||||||| ||| ||| |||||||||||||||||||||||||||||||||||   ||| | ||| ||||||||||||    
T  33871914 ggcaacctggtgcactaaagctctcgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttatcctgtttttacacaagag 33872013  T
Q  322 gttgttttcagaacttaaaccc 343  Q
    ||||||| ||| |||| |||||    
T  33872014 gttgtttccaggacttgaaccc 33872035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 217 - 297
Target Start/End: Original strand, 38262195 - 38262275
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaa 297  Q
    |||||||||| || ||||||| ||||| ||||||||||||||| ||||||||||||||| |||||||||||||||| ||||    
T  38262195 aaaagggcaatccggtgcactaaagctcccgcatacgcagtgttcgggaaggggtcccatcatttggtgtattgtatgcaa 38262275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 343
Target Start/End: Original strand, 19426889 - 19427015
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgtta-ccttgtatttaca 315  Q
    ||||||||||||| |||||||||||||  |||||| |||| ||||| ||| ||||||||||||||||||||||||||||| | ||| |||  | ||||||    
T  19426889 aaaagggcaacccggtgcactgaagctctcgcatatgcagggtccgagaa-gggtcccaccatttggtgtattgtacgcagtcttaccctattttttaca 19426987  T
Q  316 caagaggttgttttcagaacttaaaccc 343  Q
    ||||||| ||||| ||| |||| |||||    
T  19426988 caagaggctgtttccaggacttgaaccc 19427015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 215 - 337
Target Start/End: Original strand, 31591106 - 31591227
Alignment:
Q  215 ataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttac 314  Q
    ||||||||||||||| |||||||  |||| ||||||| |||  ||||||||||||||||||||||||  |||||||||||||   ||||  ||| |||||    
T  31591106 ataaaagggcaacccggtgcactagagctcccgcatatgcaaggtccgggaaggggtcccaccatttattgtattgtacgcagccttactctgt-tttac 31591204  T
Q  315 acaagaggttgttttcagaactt 337  Q
    |||||||||||||| ||| ||||    
T  31591205 acaagaggttgtttccaggactt 31591227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 38604640 - 38604551
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagaggttgttt 328  Q
    ||||| |||||||||||| |||||| |||||||| |||||||||||||||||||||||   ||||| ||| ||||||||||||| |||||    
T  38604640 aagctcccgcatacgcagggtccggaaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgttt 38604551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 217 - 321
Target Start/End: Complemental strand, 42798805 - 42798700
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttaca 315  Q
    |||||||||||||  ||||||  |||| ||||||| |||| ||||||||| |||||||||||||||||||||||||||||   |||||||| | ||||||    
T  42798805 aaaagggcaacccgatgcactatagctcccgcatatgcagggtccgggaaagggtcccaccatttggtgtattgtacgcagccttaccttgttttttaca 42798706  T
Q  316 caagag 321  Q
    ||||||    
T  42798705 caagag 42798700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 261 - 496
Target Start/End: Complemental strand, 22065679 - 22065440
Alignment:
Q  261 cgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagaggttgttttcagaacttaaacccatggcttttcaatcacg 360  Q
    |||||||||||| ||| ||||| | ||||||| |||   ||||| | | ||||||||||||||||||| || ||||| ||| |||| |||||||||||||    
T  22065679 cgggaaggggtctcactatttgctttattgtatgcagctttaccctatttttacacaagaggttgtttccaaaacttgaactcatgacttttcaatcacg 22065580  T
Q  361 taacaaca---ttatcgttgcgccaaagnnnnnnnta-tataaattcctatatctaatctagaaaaataaattaggaagatccgcgcaggaaccaagtac 456  Q
    | ||||||   ||| | |||| || |||        | |||||| || ||  |||| ||||| |||| |||||| ||||||| | ||||| |||||||||    
T  22065579 tgacaacaactttaccattgcccccaaggctcccccaatataaaatcataactctagtctagtaaaacaaattaagaagatcagtgcagggaccaagtac 22065480  T
Q  457 aagactttctatttggattgtatatgacgttttcgttcat 496  Q
    |||||||||||| |||||| || ||||| |||||||||||    
T  22065479 aagactttctatatggattatagatgactttttcgttcat 22065440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 217 - 368
Target Start/End: Complemental strand, 43557611 - 43557456
Alignment:
Q  217 aaaagggcaacccagtgcactgaa-gctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgcaatgttac-cttgtattt 312  Q
    ||||||||||||| ||||||| || ||| |||||||||||| |||||||| |||||||||||||  |||||||||||||||||   |||| ||  | |||    
T  43557611 aaaagggcaacccggtgcactaaaagctcccgcatacgcagagtccgggagggggtcccaccattattggtgtattgtacgcagccttactctgtttttt 43557512  T
Q  313 acacaagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    |||||||||| ||||| ||| |||| |||||||| | ||||| |||| | ||||||    
T  43557511 acacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaaca 43557456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 368
Target Start/End: Original strand, 32233134 - 32233285
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    ||||||||| ||| ||||||||||||| || |||| |||| ||  |||||||  ||||||||||||||||| | |||||    ||||| ||| |||||||    
T  32233134 aaaagggcagcccggtgcactgaagctccctcatatgcagggtttgggaaggaatcccaccatttggtgtaatatacgctgccttaccctgtttttacac 32233233  T
Q  317 aagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    |||||||||||| ||| |||| |||||||| | ||||| ||| || ||||||    
T  32233234 aagaggttgtttccaggacttgaacccatgacctttcagtcaggtgacaaca 32233285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 337
Target Start/End: Complemental strand, 42477005 - 42476888
Alignment:
Q  219 aagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaa 318  Q
    ||||||||||  |||||||  |||| ||||||| |||| | |  ||||||||||||||||||||||||||||||||||   ||||||||| |||||||||    
T  42477005 aagggcaacctggtgcactagagctcccgcatatgcagagcctaggaaggggtcccaccatttggtgtattgtacgcagccttaccttgt-tttacacaa 42476907  T
Q  319 gaggttgttttcagaactt 337  Q
    |||  ||||| ||||||||    
T  42476906 gagactgtttccagaactt 42476888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 217 - 343
Target Start/End: Complemental strand, 42805662 - 42805533
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgcaatgttaccttg-tattta 313  Q
    ||||||||||||| ||||||| ||||| ||||||| || | ||||||||||||||||||||||  |||||||||||||| ||   ||||| || | ||||    
T  42805662 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgtttttta 42805563  T
Q  314 cacaagaggttgttttcagaacttaaaccc 343  Q
    ||||||||| ||||| ||| |||| |||||    
T  42805562 cacaagaggctgtttccaggacttgaaccc 42805533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 219 - 368
Target Start/End: Complemental strand, 11741927 - 11741779
Alignment:
Q  219 aagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaa 318  Q
    ||||||||||| |||||||  |||| ||||||  ||||  ||||||||||| ||||||||||||||||||||||||||   ||||| | | ||||||| |    
T  11741927 aagggcaacccggtgcactagagctcccgcatgtgcagaatccgggaagggatcccaccatttggtgtattgtacgcagccttaccctat-tttacacta 11741829  T
Q  319 gaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    || | ||||||||| |||| |||||||| | ||||| |||| | ||||||    
T  11741828 gaagctgttttcaggacttgaacccatgacctttcagtcacatgacaaca 11741779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 23419674 - 23419799
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttacac 316  Q
    |||||||| |||  |||||| ||||  ||||| |||||  |||  |||||||||||||||||||||||||||||||||| | ||||| || | |||||||    
T  23419674 aaagggcagcccgatgcactaaagcccccgcacacgcaaggtctaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacac 23419773  T
Q  317 aagaggttgttttcagaacttaaacc 342  Q
    |||||| ||||| |||||||| ||||    
T  23419774 aagaggctgtttccagaacttgaacc 23419799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 220 - 293
Target Start/End: Original strand, 35334818 - 35334891
Alignment:
Q  220 agggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtac 293  Q
    |||| ||||| ||||||| ||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||    
T  35334818 agggaaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtac 35334891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 218 - 343
Target Start/End: Complemental strand, 47716596 - 47716468
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgcaatgttaccttg-tatttac 314  Q
    |||||||||||| ||||||  ||||| ||||||| || | ||||||||||||||||||||||  |||||||||||||||||   ||||| || | |||||    
T  47716596 aaagggcaacccggtgcaccaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttac 47716497  T
Q  315 acaagaggttgttttcagaacttaaaccc 343  Q
    |||||||| ||||| ||| |||| |||||    
T  47716496 acaagaggctgtttccaggacttgaaccc 47716468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 19265949 - 19265871
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||||||| ||| ||||||| ||||| || |||| | || |||||||||||||||||||||||||||||||||||||||    
T  19265949 aaaagggcagcccggtgcactaaagctcccacatatgtag-gtccgggaaggggtcccaccatttggtgtattgtacgca 19265871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 265 - 346
Target Start/End: Original strand, 48123531 - 48123613
Alignment:
Q  265 aaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttacacaagaggttgttttcagaacttaaacccatg 346  Q
    |||||||||||||||||||||||||||| ||| | ||||| || ||||||||||||||| ||||| ||| |||| ||||||||    
T  48123531 aaggggtcccaccatttggtgtattgtatgcagttttaccctgttatttacacaagaggctgtttccaggacttgaacccatg 48123613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 18747621 - 18747544
Alignment:
Q  219 aagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||||| ||| ||||||| ||||| |||||||||||| || | |||||||||||||||| |||||||||| ||||||    
T  18747621 aagggcagcccggtgcactaaagctcccgcatacgcagggttcaggaaggggtcccaccaattggtgtattatacgca 18747544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 19266564 - 19266507
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||| |||||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  19266564 aagctcccgcatacgcagggtccgggaagggatcccacaatttggtgtattgtacgca 19266507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 322
Target Start/End: Complemental strand, 23231692 - 23231587
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgta-tttacac 316  Q
    |||||| ||| | ||||||| ||||| |||||||||||| || ||||||||||||||| |||| |||||||| ||||||   ||||||| || |||||||    
T  23231692 aaagggaaactcggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagccttaccttatattttacac 23231593  T
Q  317 aagagg 322  Q
    ||||||    
T  23231592 aagagg 23231587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 247 - 322
Target Start/End: Complemental strand, 1408563 - 1408487
Alignment:
Q  247 gcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttacacaagagg 322  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||| ||   |||||||| | |||||||||||||    
T  1408563 gcatacgcagggtccgggaaggggtcccaccatttgctgtattgtacacagccttaccttgttttttacacaagagg 1408487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 217 - 293
Target Start/End: Complemental strand, 13805236 - 13805161
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtac 293  Q
    ||||||| | ||||||||||  ||||| |||||||||||| |||| ||||| |||||||||||||||||||||||||    
T  13805236 aaaagggtagcccagtgcaca-aagctcccgcatacgcagggtccaggaagtggtcccaccatttggtgtattgtac 13805161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 321
Target Start/End: Original strand, 21139760 - 21139851
Alignment:
Q  230 agtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagag 321  Q
    |||||||| ||||| |||||||| ||| || ||||||||||||||||||||||||||| ||||  |||  ||||  ||| ||||||||||||    
T  21139760 agtgcactaaagcttccgcatacacagagttcgggaaggggtcccaccatttggtgtactgtatccaaccttactctgtttttacacaagag 21139851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 273 - 343
Target Start/End: Complemental strand, 6736969 - 6736899
Alignment:
Q  273 ccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagaggttgttttcagaacttaaaccc 343  Q
    |||||||||||||||||||| ||| | ||||||||| |||| ||||||||||||||| || |||| |||||    
T  6736969 ccaccatttggtgtattgtatgcagtcttaccttgtttttatacaagaggttgttttgaggacttgaaccc 6736899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 262 - 337
Target Start/End: Original strand, 8148989 - 8149066
Alignment:
Q  262 gggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtattt--acacaagaggttgttttcagaactt 337  Q
    ||||||||||||||||||||||||||||||||||||  ||||| | | |||  ||||||||||| |||||||| ||||    
T  8148989 gggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttaacacaagaggtagttttcaggactt 8149066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 247 - 368
Target Start/End: Original strand, 14099035 - 14099157
Alignment:
Q  247 gcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgtt-accttgtatttacacaagaggttgttttcagaacttaaacccat 345  Q
    ||||||| || || |||||||||||||||||||||||||||||||||||| | || ||||  | ||||||||| ||| | ||| ||| |||| |||||||    
T  14099035 gcatacgtagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaacccat 14099134  T
Q  346 ggcttttcaatcacgtaacaaca 368  Q
    | | ||||| |||| | ||||||    
T  14099135 gacctttcagtcacatgacaaca 14099157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 247 - 368
Target Start/End: Original strand, 14409052 - 14409174
Alignment:
Q  247 gcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgtt-accttgtatttacacaagaggttgttttcagaacttaaacccat 345  Q
    ||||||| || || |||||||||||||||||||||||||||||||||||| | || ||||  | ||||||||| ||| | ||| ||| |||| |||||||    
T  14409052 gcatacgtagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaacccat 14409151  T
Q  346 ggcttttcaatcacgtaacaaca 368  Q
    | | ||||| |||| | ||||||    
T  14409152 gacctttcagtcacatgacaaca 14409174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 46354291 - 46354178
Alignment:
Q  258 gtccgggaaggggtcccaccatt--tggtgtattgtacgcaatgttaccttgtattt-acacaagaggttgttttcagaacttaaacccatggcttttca 354  Q
    |||||||||||||||||||||||  ||||||||||||||||   ||||| ||| ||| |||||||||||||||| ||| |||| ||||| || | || ||    
T  46354291 gtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgaccttcca 46354192  T
Q  355 atcacgtaacaaca 368  Q
    ||||| | ||||||    
T  46354191 atcacatgacaaca 46354178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 297
Target Start/End: Original strand, 3469176 - 3469256
Alignment:
Q  219 aagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca--tttggtgtattgtacgcaa 297  Q
    ||||||||||||| ||||| ||||| |||||||| ||| |||  |||||||||||| |||  |||||||||||||||||||    
T  3469176 aagggcaacccagcgcactaaagctcccgcatacacagggtctaggaaggggtcccgccatttttggtgtattgtacgcaa 3469256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 245 - 368
Target Start/End: Complemental strand, 7645064 - 7644940
Alignment:
Q  245 ccgcatacgcagtgtccgggaaggggtcccaccattt-ggtgtattgtacgcaatgttaccttgtattt-acacaagaggttgttttcagaacttaaacc 342  Q
    |||||||||||| ||| || |||||||||||| |||| |||||||||||||| || ||||| ||| ||| |||||||||| ||||| ||| |||| ||||    
T  7645064 ccgcatacgcagggtcagg-aaggggtcccacaattttggtgtattgtacgctatcttaccctgttttttacacaagaggctgtttccaggacttgaacc 7644966  T
Q  343 catggcttttcaatcacgtaacaaca 368  Q
    | || | ||||| |||||| ||||||    
T  7644965 cgtgacctttcagtcacgttacaaca 7644940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 45018923 - 45019005
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca----tttggtgtattgtacgca 296  Q
    |||||||||||  ||||||| ||||| |||||||||||| |||||||||||||| ||||||    |||||| |||||||||||    
T  45018923 aaagggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggttccaccagttttttggtatattgtacgca 45019005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 33500635 - 33500587
Alignment:
Q  233 gcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccattt 281  Q
    ||||||||| | |||||||||||| ||||||||||||||||||||||||    
T  33500635 gcactgaagatcccgcatacgcagggtccgggaaggggtcccaccattt 33500587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 343
Target Start/End: Original strand, 44123651 - 44123747
Alignment:
Q  247 gcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagaggttgttttcagaacttaaaccc 343  Q
    |||||||||||||||| ||| ||||||||  || |||||||||  | ||||  ||||||||| ||||||||||||| ||||| ||| |||| |||||    
T  44123651 gcatacgcagtgtccgagaacgggtcccattatatggtgtatttcatgcaaccttaccttgtttttacacaagaggctgtttccagtacttgaaccc 44123747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 29907552 - 29907476
Alignment:
Q  219 aagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca-tttggtgtattgtacgca 296  Q
    ||||||||||| ||||||| ||||| |||||||  ||| |||||||| |||||||||||| |||||||||||| |||||    
T  29907552 aagggcaacccggtgcactaaagctcccgcata--cagggtccgggatggggtcccaccattttggtgtattgaacgca 29907476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 276
Target Start/End: Complemental strand, 11888472 - 11888414
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccac 276  Q
    |||||||||||||||||||||||||| | |||||| ||| |||| | ||||||||||||    
T  11888472 aaagggcaacccagtgcactgaagctcctgcatacacagggtccagaaaggggtcccac 11888414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 296
Target Start/End: Complemental strand, 21566558 - 21566492
Alignment:
Q  231 gtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca-tttggtgtattgtacgca 296  Q
    ||||||| ||||| ||||||| |||| || ||||||||||||| |||| ||||||||||||||||||    
T  21566558 gtgcactaaagctcccgcatatgcagggttcgggaaggggtcctaccattttggtgtattgtacgca 21566492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 296
Target Start/End: Original strand, 28362189 - 28362223
Alignment:
Q  262 gggaaggggtcccaccatttggtgtattgtacgca 296  Q
    |||||||||||||||||||||||||||||||||||    
T  28362189 gggaaggggtcccaccatttggtgtattgtacgca 28362223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 321
Target Start/End: Original strand, 22698967 - 22699074
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaag-gggtcccaccattt--ggtgtattgtacgcaatgttaccttg-tattta 313  Q
    |||||| ||||| |||||||  |||| |||||||| ||| |||||||||  ||||||||||||||  ||||||||||||||| | ||||| || | ||||    
T  22698967 aaagggtaacccggtgcactatagctcccgcatacacagggtccgggaaaagggtcccaccatttttggtgtattgtacgcagtcttaccctgtttttta 22699066  T
Q  314 cacaagag 321  Q
    ||||||||    
T  22699067 cacaagag 22699074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 293
Target Start/End: Original strand, 23618976 - 23619052
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtac 293  Q
    |||||||||||||  |||||| ||||| | ||| |||||  ||| | ||||||||||||||||||| ||||||||||    
T  23618976 aaaagggcaacccgctgcactaaagctcctgcaaacgcaaggtctgcgaaggggtcccaccatttgatgtattgtac 23619052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 39124009 - 39123950
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccacca--tttggtgtattgtacgca 296  Q
    ||||| || ||||||||| |||||||||||||||||||||  ||||||||||| ||||||    
T  39124009 aagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgca 39123950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 297
Target Start/End: Original strand, 47077854 - 47077934
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaa 297  Q
    |||| ||||| || |||||||  |||| ||||||| | || ||  |||||||||||||||||||| |||||||||||||||    
T  47077854 aaaaaggcaatccggtgcactagagctcccgcatatgtagggtttgggaaggggtcccaccattttgtgtattgtacgcaa 47077934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 368
Target Start/End: Original strand, 5653224 - 5653279
Alignment:
Q  313 acacaagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    ||||||||||||||||||||||||| |||  ||||| ||| |||||||| ||||||    
T  5653224 acacaagaggttgttttcagaacttgaacttatggcattttaatcacgtgacaaca 5653279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 342
Target Start/End: Original strand, 2662985 - 2663058
Alignment:
Q  268 gggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagaggttgttttcagaacttaaacc 342  Q
    |||||||||||||||||||||||||||||   ||||| | | ||||||||||||| ||||| ||| |||| ||||    
T  2662985 gggtcccaccatttggtgtattgtacgcagccttaccctat-tttacacaagaggctgtttccaggacttgaacc 2663058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 296
Target Start/End: Original strand, 36267830 - 36267896
Alignment:
Q  231 gtgcactgaagctaccgcatacgcagtgtccgggaag-gggtcccaccatttggtgtattgtacgca 296  Q
    ||||||| ||||| |||||||| ||| || ||||||  |||||| ||||||||||||||||||||||    
T  36267830 gtgcactaaagctcccgcatacacagggttcgggaaatgggtccaaccatttggtgtattgtacgca 36267896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 328
Target Start/End: Original strand, 23604553 - 23604609
Alignment:
Q  271 tcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagaggttgttt 328  Q
    |||||||||||| |||||||| | |||| ||||| ||| |||||||||||||||||||    
T  23604553 tcccaccatttgatgtattgt-cacaatcttaccctgtttttacacaagaggttgttt 23604609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 290
Target Start/End: Original strand, 28078175 - 28078204
Alignment:
Q  261 cgggaaggggtcccaccatttggtgtattg 290  Q
    ||||||||||||||||||||||||||||||    
T  28078175 cgggaaggggtcccaccatttggtgtattg 28078204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 346
Target Start/End: Complemental strand, 12473378 - 12473310
Alignment:
Q  279 tttggtgtattgtacgcaatgttaccttgtattt-acacaagaggttgttttcagaacttaaacccatg 346  Q
    ||||||||||||||||||   ||||| ||| ||| |||||||||||||||| ||| |||| ||||||||    
T  12473378 tttggtgtattgtacgcatccttaccctgtttttgacacaagaggttgtttgcaggacttgaacccatg 12473310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 36602583 - 36602535
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccggga 265  Q
    ||||||||||||| ||||||| ||||| |||||||||||| ||| ||||    
T  36602583 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtctggga 36602535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 233 - 304
Target Start/End: Original strand, 42101899 - 42101971
Alignment:
Q  233 gcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca-tttggtgtattgtacgcaatgttacc 304  Q
    ||||| ||||| ||| |||||||| ||||||||| ||||||||||| ||| | ||| |||||||| |||||||    
T  42101899 gcactaaagctgccggatacgcagggtccgggaaagggtcccaccactttagagtactgtacgcagtgttacc 42101971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 72; Significance: 2e-32; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 217 - 343
Target Start/End: Complemental strand, 46967 - 46840
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgtta-ccttgtatttaca 315  Q
    ||||||||||||| ||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||| |||  | ||||||    
T  46967 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttaca 46868  T
Q  316 caagaggttgttttcagaacttaaaccc 343  Q
    ||||||||||||| ||| |||| |||||    
T  46867 caagaggttgtttccagcacttgaaccc 46840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 213 - 337
Target Start/End: Complemental strand, 43798 - 43674
Alignment:
Q  213 ttataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaa-ggggtcccaccatttggtgtattgtacgcaatgttaccttgtatt 311  Q
    ||||||||||||||| |||||||||  |||| ||||||| |||| ||||| ||| ||||||||||||||||||||||||||||||   ||||||||| ||    
T  43798 ttataaaagggcaactcagtgcactagagctcccgcatatgcagggtccgagaaaggggtcccaccatttggtgtattgtacgcagccttaccttgt-tt 43700  T
Q  312 tacacaagaggttgttttcagaactt 337  Q
    ||||||||| | ||||| ||||||||    
T  43699 tacacaagacgctgtttccagaactt 43674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 24771 - 24850
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||||||||||   |||||| ||||| |||||||||||| || |||||||||||||||||||||||||| |||||||||    
T  24771 aaaagggcaaccggctgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtgttgtacgca 24850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 46728 - 46770
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccaccattt 281  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||    
T  46728 aagctcccgcatacgcagggtctgggaaggggtcccaccattt 46770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 1e-30; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 212 - 343
Target Start/End: Original strand, 8455310 - 8455442
Alignment:
Q  212 tttataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgt-at 310  Q
    |||||||||||||||||| ||||||| ||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||   ||||| |||  |    
T  8455310 tttataaaagggcaacccggtgcactaaagctccggcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtgtt 8455409  T
Q  311 ttacacaagaggttgttttcagaacttaaaccc 343  Q
    |||||||||||| ||||| ||| |||| |||||    
T  8455410 ttacacaagaggctgtttccaggacttgaaccc 8455442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 216 - 328
Target Start/End: Complemental strand, 9671316 - 9671205
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttaca 315  Q
    |||||||||||||| ||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||   ||||| ||| ||||||    
T  9671316 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-tttaca 9671218  T
Q  316 caagaggttgttt 328  Q
    ||||||| |||||    
T  9671217 caagaggctgttt 9671205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 215 - 368
Target Start/End: Original strand, 21779258 - 21779410
Alignment:
Q  215 ataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttac 314  Q
    ||||||||||||||| |||||||  |||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||  ||||| ||| |||||    
T  21779258 ataaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgt-tttac 21779356  T
Q  315 acaagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    |||||||| ||| | ||| |||| ||||| || | ||||| |||| | ||||||    
T  21779357 acaagaggctgtctccaggacttgaacccgtgacctttcagtcacatgacaaca 21779410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 10546299 - 10546220
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||||||||||| ||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10546299 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgca 10546220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 217 - 328
Target Start/End: Complemental strand, 36871627 - 36871517
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    ||||||||||||| ||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||   ||||| ||| || ||||    
T  36871627 aaaagggcaacccggtgcactaaagctcccgcatacgcag-gtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttcacac 36871529  T
Q  317 aagaggttgttt 328  Q
    |||||| |||||    
T  36871528 aagaggctgttt 36871517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 217 - 343
Target Start/End: Complemental strand, 14444864 - 14444738
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    ||||||||||||  ||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||| |||| ||   ||||| ||| |||||||    
T  14444864 aaaagggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtatcgtacacagccttaccctgtttttacac 14444765  T
Q  317 aagaggttgttttcagaacttaaaccc 343  Q
    |||||| ||||| ||| |||| |||||    
T  14444764 aagaggctgtttccaggacttgaaccc 14444738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 218 - 328
Target Start/End: Original strand, 25079717 - 25079829
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg--tatttaca 315  Q
    |||||||||||| ||||||| |||||   |||||||||| ||||||||||||||||||||||| |||||||||||||||   ||||||||  | ||||||    
T  25079717 aaagggcaacccggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcatccttaccttgtttttttaca 25079816  T
Q  316 caagaggttgttt 328  Q
    |||||||||||||    
T  25079817 caagaggttgttt 25079829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 217 - 328
Target Start/End: Complemental strand, 17623700 - 17623588
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttaca 315  Q
    ||||||||||||||||||||| ||||| || |||||||||  | ||||||||||| ||||||||||||||||||||||||   ||||| || | ||||||    
T  17623700 aaaagggcaacccagtgcactaaagcttccacatacgcaggattcgggaaggggttccaccatttggtgtattgtacgcagccttaccctgatttttaca 17623601  T
Q  316 caagaggttgttt 328  Q
    |||||||||||||    
T  17623600 caagaggttgttt 17623588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 368
Target Start/End: Complemental strand, 10543835 - 10543682
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca--tttggtgtattgtacgcaatgttaccttg-tatttac 314  Q
    |||||||||||| ||||||| ||||| |||||||||||| |||||||||||||||||||||  ||||||||||||||||||   ||||| || | |||||    
T  10543835 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttac 10543736  T
Q  315 acaagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    ||||||||  |||| ||| |||| ||||| || | ||||| |||| | ||||||    
T  10543735 acaagaggccgtttccaggacttgaacccgtgacctttcagtcacatgacaaca 10543682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 217 - 321
Target Start/End: Original strand, 25249737 - 25249841
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    ||||||||||||| ||||||| |||||  ||||||||||| || ||||||||| ||||||||||||||||||||||||||   ||||| ||| | |||||    
T  25249737 aaaagggcaacccggtgcactaaagctcacgcatacgcagggttcgggaagggatcccaccatttggtgtattgtacgcagccttaccctgtttgtacac 25249836  T
Q  317 aagag 321  Q
    |||||    
T  25249837 aagag 25249841  T

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Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 214 - 328
Target Start/End: Complemental strand, 11514574 - 11514460
Alignment:
Q  214 tataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tattt 312  Q
    ||||||||||||| || ||||||| ||||| |||||||||||| ||| ||||| |||||||||||||||||||||||||||||   |||| ||| | |||    
T  11514574 tataaaagggcaatccggtgcactaaagctcccgcatacgcagggtctgggaa-gggtcccaccatttggtgtattgtacgcagccttactttgtttttt 11514476  T
Q  313 acacaagaggttgttt 328  Q
    |||||||||| |||||    
T  11514475 acacaagaggctgttt 11514460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 249 - 368
Target Start/End: Original strand, 12023950 - 12024069
Alignment:
Q  249 atacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagaggttgttttcagaacttaaacccatggc 348  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||   ||||| ||| ||||||||||||| ||||| ||| |||| ||||| || |    
T  12023950 atacgcagggtccgggagggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgac 12024049  T
Q  349 ttttcaatcacgtaacaaca 368  Q
     ||||| |||| | ||||||    
T  12024050 ctttcagtcacatgacaaca 12024069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 218 - 294
Target Start/End: Complemental strand, 14530455 - 14530377
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacg 294  Q
    |||||||||||| ||||||| ||||| |||||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  14530455 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacg 14530377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 218 - 368
Target Start/End: Complemental strand, 23397899 - 23397750
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacaca 317  Q
    |||||||||||| |||||||  |||| ||||||| | || ||||| ||||||||||||||||||||||||||||||| |   ||||| | | ||||||||    
T  23397899 aaagggcaacccggtgcactagagctcccgcatatgtagggtccgagaaggggtcccaccatttggtgtattgtacgtagccttaccctat-tttacaca 23397801  T
Q  318 agaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    ||||| ||||| ||| |||| |||||||| | ||||| |||| | ||||||    
T  23397800 agaggctgtttccaggacttgaacccatgacctttcagtcacatgacaaca 23397750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 239 - 328
Target Start/End: Original strand, 32781309 - 32781399
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttacacaagaggttgttt 328  Q
    ||||| |||||||| ||| ||| ||||||||||||||||||||||||||||||||||| | ||||| || | |||||||||||||||||||    
T  32781309 aagctcccgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgttt 32781399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 218 - 294
Target Start/End: Original strand, 40762234 - 40762310
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacg 294  Q
    |||||||||||| ||||||| ||||| || ||||||||| |||| |||| |||||||||||||||||||||||||||    
T  40762234 aaagggcaacccggtgcactaaagctcccacatacgcagggtccaggaaagggtcccaccatttggtgtattgtacg 40762310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 343
Target Start/End: Complemental strand, 17668138 - 17668011
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttaca 315  Q
    ||||||||||||| ||||||| ||||| ||  |||||||| || || |||||||| ||||||||||||||||||||||||   ||||| || | ||||||    
T  17668138 aaaagggcaacccggtgcactaaagctcccatatacgcagggttcgagaaggggttccaccatttggtgtattgtacgcagccttaccctgatttttaca 17668039  T
Q  316 caagaggttgttttcagaacttaaaccc 343  Q
    ||||||||| ||| ||| |||| |||||    
T  17668038 caagaggttctttccaggacttgaaccc 17668011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 368
Target Start/End: Original strand, 24200622 - 24200776
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca--tttggtgtattgtacgcaatgttaccttg-tattta 313  Q
    ||||||||||||| ||||||| |||||  | ||||| ||| |||||||||||| ||||||||  ||||||||||||||||||   ||||| || | ||||    
T  24200622 aaaagggcaacccggtgcactaaagctctcacatactcagggtccgggaagggttcccaccatttttggtgtattgtacgcagccttaccctgtttttta 24200721  T
Q  314 cacaagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    ||||||||| ||||| ||| |||| ||||| || ||||||| |||| | ||||||    
T  24200722 cacaagaggctgtttccaggacttgaacccgtgacttttcagtcacatgacaaca 24200776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 217 - 343
Target Start/End: Original strand, 24859987 - 24860112
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    |||| ||||| || ||||||| ||||| |||||||||||| ||||| |||||||| | ||||||||||||||||||||| |   |||| ||| |||||||    
T  24859987 aaaaaggcaatccggtgcactaaagctcccgcatacgcagggtccgagaaggggttctaccatttggtgtattgtacgc-agcctaccatgtttttacac 24860085  T
Q  317 aagaggttgttttcagaacttaaaccc 343  Q
     ||||||||||| |||  |||||||||    
T  24860086 cagaggttgtttccagggcttaaaccc 24860112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 221 - 337
Target Start/End: Original strand, 4516354 - 4516471
Alignment:
Q  221 gggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttacacaag 319  Q
    ||||| ||| || |||| ||||| || ||||||||| ||||||||||||||||||||| |||||||||||||||||  ||| || || | ||||||||||    
T  4516354 gggcagcccggtacactaaagcttccacatacgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagcgttgccctgttttttacacaag 4516453  T
Q  320 aggttgttttcagaactt 337  Q
    ||| |||||  |||||||    
T  4516454 aggctgtttctagaactt 4516471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 337
Target Start/End: Original strand, 39914304 - 39914426
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg--tattta 313  Q
    ||||||||||||||  |||||| ||||| |||||||||||| ||| || |||||||||||||||| |||||||||||| ||   ||||| ||  | ||||    
T  39914304 taaaagggcaacccgatgcactaaagctcccgcatacgcagggtcagg-aaggggtcccaccattcggtgtattgtacacatccttaccctgttttttta 39914402  T
Q  314 cacaagaggttgttttcagaactt 337  Q
    ||||||||||||||| ||| ||||    
T  39914403 cacaagaggttgtttccagtactt 39914426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 44643660 - 44643580
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    |||||||||| ||| ||||||| | ||| |||||||||||| ||| |||||||||||||||||||||||  ||||||||||    
T  44643660 taaaagggcagcccggtgcactaaggctcccgcatacgcagggtctgggaaggggtcccaccatttggtacattgtacgca 44643580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 17896396 - 17896317
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||||||||| |  |||||| ||||| || ||||||||| ||||| ||||||||||||||||||||| |||||||||||    
T  17896396 aaaagggcaactcgatgcactaaagctcccacatacgcagggtccgagaaggggtcccaccatttggtatattgtacgca 17896317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 220 - 279
Target Start/End: Complemental strand, 41409995 - 41409936
Alignment:
Q  220 agggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat 279  Q
    |||||||||| ||||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  41409995 agggcaacccggtgcactgaagctcccgcatatgcagggtccgggaaggggtcccaccat 41409936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 215 - 281
Target Start/End: Complemental strand, 23488621 - 23488555
Alignment:
Q  215 ataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccattt 281  Q
    ||||||| ||||||| ||||||| |||||  ||||||||||| ||||||||||||||||||||||||    
T  23488621 ataaaagagcaacccggtgcactaaagctctcgcatacgcagggtccgggaaggggtcccaccattt 23488555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 24890534 - 24890472
Alignment:
Q  230 agtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgta 292  Q
    |||||||| ||||| | |||||||||| ||||||||||||||||||||| |||||||||||||    
T  24890534 agtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccaattggtgtattgta 24890472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 25632644 - 25632566
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    |||||||||||| ||||||| ||||| ||||||||| |  || ||||||||  ||||||||||||||||||||||||||    
T  25632644 aaagggcaacccggtgcactaaagctcccgcatacgtaaggttcgggaaggaatcccaccatttggtgtattgtacgca 25632566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 343
Target Start/End: Original strand, 19977727 - 19977840
Alignment:
Q  231 gtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgtta-ccttgtatttacacaagaggttgtttt 329  Q
    ||||||| ||||| |||||||| ||  || ||||||||| |||||||||||||||||||||||||||  ||| |||  | |||||| |||||| |||||     
T  19977727 gtgcactaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgcaaccttatcctattttttacaaaagaggctgtttc 19977826  T
Q  330 cagaacttaaaccc 343  Q
    |||||||| |||||    
T  19977827 cagaacttgaaccc 19977840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 214 - 278
Target Start/End: Complemental strand, 34080240 - 34080176
Alignment:
Q  214 tataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca 278  Q
    |||||||||||||||| ||||||| || || ||||||| |||| |||||||||||||||||||||    
T  34080240 tataaaagggcaacccggtgcactaaaactcccgcatatgcagggtccgggaaggggtcccacca 34080176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 40579750 - 40579810
Alignment:
Q  219 aagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat 279  Q
    ||||||||||| ||||||| ||||| |||||||| ||| ||||||||||||||||||||||    
T  40579750 aagggcaacccggtgcactaaagctcccgcatactcagggtccgggaaggggtcccaccat 40579810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 5841167 - 5841085
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgca 296  Q
    |||||||||||| | ||||||| ||||| ||||||| || | ||||||||||||||||||||||  ||| |||||||||||||    
T  5841167 taaaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattgatgtattgtacgca 5841085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 22371158 - 22371111
Alignment:
Q  249 atacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||    
T  22371158 atacacagggtccgggaaggggtcccaccatttggtgtattgtacgca 22371111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 368
Target Start/End: Original strand, 26684619 - 26684773
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttacc--ttgtatttac 314  Q
    |||||| ||| || ||||| | ||||| |||||||||||| || ||||||| ||||||||||||| || |||||||||||   |||||   | | |||||    
T  26684619 aaaaggacaatccggtgcattaaagctcccgcatacgcagggttcgggaagaggtcccaccatttagtatattgtacgcagccttaccatatttttttac 26684718  T
Q  315 acaagaggt-tgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    ||||||||| ||||||||| |||||||||  || | |||||||||| | ||||||    
T  26684719 acaagaggtctgttttcaggacttaaacctttgacctttcaatcacatgacaaca 26684773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 217 - 343
Target Start/End: Complemental strand, 25641637 - 25641511
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    |||||| ||| || || |||| |||||  |||||||||||  | |||||||||||||||| ||||||||||||||||||||  ||||| ||| || ||||    
T  25641637 aaaaggacaatccggttcactaaagctctcgcatacgcaggattcgggaaggggtcccacaatttggtgtattgtacgcaactttaccctgttttcacac 25641538  T
Q  317 aagaggttgttttcagaacttaaaccc 343  Q
    || | | ||||| ||| |||| |||||    
T  25641537 aaaatgctgtttccaggacttgaaccc 25641511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 296
Target Start/End: Original strand, 99274 - 99343
Alignment:
Q  227 cccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    |||||| |||| ||||| |||||||| ||| ||| | |||||||| ||||||||||||||||||||||||    
T  99274 cccagtacactaaagctcccgcatacacagggtctgagaaggggttccaccatttggtgtattgtacgca 99343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 239 - 328
Target Start/End: Original strand, 17380258 - 17380347
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagaggttgttt 328  Q
    ||||| |||||| ||||| |||| ||||||||| ||| |||||||||||||| || |||  ||||| ||| | |||||||||||||||||    
T  17380258 aagctcccgcatccgcagggtccaggaaggggttccatcatttggtgtattgcacacaaccttaccctgtttatacacaagaggttgttt 17380347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 328
Target Start/End: Complemental strand, 30826157 - 30826061
Alignment:
Q  231 gtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagaggttgttt 328  Q
    ||||||| ||||| ||||||| | || ||| |||||||| ||| |||||||||||||||||||||||  ||||| | | ||||||||||||| |||||    
T  30826157 gtgcactaaagctcccgcatatgtagggtctgggaagggttcc-accatttggtgtattgtacgcaaccttaccctatttttacacaagaggctgttt 30826061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 34766391 - 34766330
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca 278  Q
    ||||||| |||||  |||||| ||||| |||||||||||| |||||||||||||||||||||    
T  34766391 aaaagggaaacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca 34766330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 215 - 266
Target Start/End: Complemental strand, 22371250 - 22371199
Alignment:
Q  215 ataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaa 266  Q
    ||||||||||||||| ||||||| ||||| |||||||||||| |||||||||    
T  22371250 ataaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 22371199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 21377094 - 21377148
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtac 293  Q
    ||||| || ||||||||| || ||||||||||||||||||||||||| |||||||    
T  21377094 aagctcccacatacgcagggttcgggaaggggtcccaccatttggtgcattgtac 21377148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 327
Target Start/End: Complemental strand, 27573756 - 27573646
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    |||||||||||||  |||||| ||||| || ||||| ||| ||  |||||  ||| ||||||||||||||||||||||||   ||||| ||| | |||||    
T  27573756 aaaagggcaacccgatgcactaaagctcccacatacacagggtttgggaaatggttccaccatttggtgtattgtacgcagccttaccatgtttatacac 27573657  T
Q  317 aagaggttgtt 327  Q
    |||||| ||||    
T  27573656 aagaggctgtt 27573646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 31158460 - 31158553
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccacca--tttggtgtattgtacgcaatgttaccttg-tatttacacaagaggttgtttt 329  Q
    ||||| |||||||||||| ||| |||||||||||||||||  |||||| ||||||| ||||| ||||| || | ||||| ||||||| ||||||    
T  31158460 aagctcccgcatacgcagggtctgggaaggggtcccaccatttttggtttattgtatgcaatcttaccctgttttttacgcaagaggctgtttt 31158553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 5450381 - 5450309
Alignment:
Q  258 gtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg--tatttacacaagaggttgttt 328  Q
    |||| ||||||||||||||| ||||||||||||||||||   ||||| ||  | |||||||||||||||||||    
T  5450381 gtccaggaaggggtcccaccctttggtgtattgtacgcagccttaccatgtttttttacacaagaggttgttt 5450309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 13245096 - 13245173
Alignment:
Q  219 aagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    |||||||||||  | |||| ||||| ||| ||| |||  |||||||||||||||||||||||| ||||| ||||||||    
T  13245096 aagggcaacccgatacactaaagctcccgtatatgcatggtccgggaaggggtcccaccatttagtgtaatgtacgca 13245173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 4795891 - 4795811
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca-tttggtgtattgtacgca 296  Q
    |||||||||||||| |||||| ||||| | |||||| ||  |||||||||  |||||||||| |||||||||||| |||||    
T  4795891 aaaagggcaacccactgcactaaagcttcggcatacacaaggtccgggaaaaggtcccaccattttggtgtattgcacgca 4795811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 368
Target Start/End: Complemental strand, 7214672 - 7214518
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca--tttggtgtattgtacgcaatgttaccttgta-ttta 313  Q
    |||| |||||||  ||||||| || ||  ||||||||||||||||| |||||| || |||||  ||| ||||||||||||||   ||||| |||| ||||    
T  7214672 aaaaaggcaacctggtgcactaaaactctcgcatacgcagtgtccgagaagggatctcaccattttttgtgtattgtacgcagccttaccctgtatttta 7214573  T
Q  314 cacaagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    ||||||||  ||||| ||  |||| |||||||| | ||||| |||| | ||||||    
T  7214572 cacaagagactgtttccaagacttgaacccatgacctttcagtcacatgacaaca 7214518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 273
Target Start/End: Complemental strand, 8576030 - 8575975
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcc 273  Q
    |||||||||||  ||||||| ||||| || ||||||||| ||||||||||||||||    
T  8576030 aaagggcaacctggtgcactaaagctcccacatacgcagggtccgggaaggggtcc 8575975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 281
Target Start/End: Complemental strand, 14544201 - 14544138
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccattt 281  Q
    ||||||||||   ||||||| ||||| |||||||||||| |||| ||||||||||| |||||||    
T  14544201 aaagggcaacttggtgcactaaagctcccgcatacgcagggtcccggaaggggtccgaccattt 14544138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 289
Target Start/End: Original strand, 24059012 - 24059067
Alignment:
Q  234 cactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtatt 289  Q
    |||| ||||| || ||||||||| |||||| ||||||||||||||| |||||||||    
T  24059012 cactaaagctcccacatacgcagggtccggaaaggggtcccaccatatggtgtatt 24059067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 368
Target Start/End: Complemental strand, 33795399 - 33795269
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgta-ttgtacgcaatgttaccttg-tatttacacaagaggttgttttcagaact 336  Q
    ||||| |||||||| ||| ||| ||||||||||||||||| | |||||| |||||||||   ||||| || | ||||| ||||||||||||| | | |||    
T  33795399 aagctcccgcatacacagggtctgggaaggggtcccacca-taggtgtatttgtacgcagccttaccctgttttttacccaagaggttgtttccgggact 33795301  T
Q  337 taaacccatggcttttcaatcacgtaacaaca 368  Q
    | ||||| || | |||||||||||| ||||||    
T  33795300 tgaacccgtgacctttcaatcacgtgacaaca 33795269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 258 - 296
Target Start/End: Original strand, 23145738 - 23145776
Alignment:
Q  258 gtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  23145738 gtccgggaaagggtcccaccaattggtgtattgtacgca 23145776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 258 - 296
Target Start/End: Original strand, 23557528 - 23557566
Alignment:
Q  258 gtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  23557528 gtccgggaaagggtcccaccaattggtgtattgtacgca 23557566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 226 - 288
Target Start/End: Complemental strand, 31523358 - 31523296
Alignment:
Q  226 acccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtat 288  Q
    |||||||||||| ||||| ||||||| |||| ||  ||||| |||| ||||||||||||||||    
T  31523358 acccagtgcactaaagctcccgcatatgcagggtttgggaaagggttccaccatttggtgtat 31523296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 44449416 - 44449462
Alignment:
Q  251 acgcagtgtccgggaaggggtcccacca-tttggtgtattgtacgca 296  Q
    |||||| ||||||||||||||||||| | ||||||||||||||||||    
T  44449416 acgcagggtccgggaaggggtcccactattttggtgtattgtacgca 44449462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 328
Target Start/End: Original strand, 30864430 - 30864527
Alignment:
Q  231 gtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagaggttgttt 328  Q
    |||||| |||||| |||||||||||| ||  ||||| || ||  |||||||||| |||||||||||   ||||| | | ||||||||||||| |||||    
T  30864430 gtgcaccgaagcttccgcatacgcagggtttgggaaaggatcttaccatttggtatattgtacgcacccttaccctatttttacacaagaggctgttt 30864527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 296
Target Start/End: Original strand, 39499243 - 39499308
Alignment:
Q  231 gtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||||| ||||| ||||||||||||  | ||  ||||| |||||||||||| |||||||||||||    
T  39499243 gtgcactaaagctcccgcatacgcaggattcgaaaagggatcccaccatttgatgtattgtacgca 39499308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 124918 - 124962
Alignment:
Q  222 ggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaa 266  Q
    |||||||| ||||||| ||||| |||||||||||| |||||||||    
T  124918 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 124962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 287
Target Start/End: Complemental strand, 4252684 - 4252656
Alignment:
Q  259 tccgggaaggggtcccaccatttggtgta 287  Q
    |||||||||||||||||||||||||||||    
T  4252684 tccgggaaggggtcccaccatttggtgta 4252656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 217 - 343
Target Start/End: Complemental strand, 10946 - 10819
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttaca 315  Q
    ||||| ||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||    |||| || | ||||||    
T  10946 aaaagagcaacccagtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattggacgcagccctaccctgttttttaca 10847  T
Q  316 caagaggttgttttcagaacttaaaccc 343  Q
    |||||||||||||||||| ||| |||||    
T  10846 caagaggttgttttcagaccttgaaccc 10819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 216 - 337
Target Start/End: Complemental strand, 14617198 - 14617076
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttac 314  Q
    |||||||| ||||| ||||||| ||||| ||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |||||||| |||||||    
T  14617198 taaaagggtaacccggtgcactaaagctcccgcatatgcagggtccgggaagggatcccaccatttggtgtattgtacgcaaccttaccttgttatttac 14617099  T
Q  315 acaagaggttgttttcagaactt 337  Q
    |||||||| ||||| ||| ||||    
T  14617098 acaagaggctgtttccaggactt 14617076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 215 - 343
Target Start/End: Complemental strand, 10668388 - 10668257
Alignment:
Q  215 ataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgcaatgttaccttg-tatt 311  Q
    ||||||||||||||| ||||||| ||||| |||||||||||| | ||||||||||||||||||||  ||||||||||||||||||  |||||||| | ||    
T  10668388 ataaaagggcaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccttgttttt 10668289  T
Q  312 tacacaagaggttgttttcagaacttaaaccc 343  Q
    ||||||||||| ||||| ||| |||| |||||    
T  10668288 tacacaagaggctgtttccaggacttgaaccc 10668257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 217 - 328
Target Start/End: Original strand, 46247952 - 46248064
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttaca 315  Q
    ||||||||||||| || |||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||| || | ||||||    
T  46247952 aaaagggcaacccggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttaca 46248051  T
Q  316 caagaggttgttt 328  Q
    ||||||| |||||    
T  46248052 caagaggctgttt 46248064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 217 - 356
Target Start/End: Original strand, 12126836 - 12126974
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    ||||||||||| |||||||||  |||| ||||||| |||| ||||||||||||||||||| |||||||||||||||||||   ||||| ||| |||||||    
T  12126836 aaaagggcaacgcagtgcactacagctcccgcatatgcagggtccgggaaggggtcccacaatttggtgtattgtacgcagccttaccctgt-tttacac 12126934  T
Q  317 aagaggttgttttcagaacttaaacccatggcttttcaat 356  Q
    |||| | ||||| |||||||||||||| || | |||||||    
T  12126935 aagaagctgtttccagaacttaaacccgtgacctttcaat 12126974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 213 - 368
Target Start/End: Original strand, 34725093 - 34725247
Alignment:
Q  213 ttataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtattt 312  Q
    ||||||||||||||||| |||||||  |||| ||||||| |||| |||||||||||||||||||||||| ||||||||||||||   ||||| ||| |||    
T  34725093 ttataaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttagtgtattgtacgcagccttaccctgt-ttt 34725191  T
Q  313 acacaagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    |||||||||| ||||| ||| |||| ||||| || | ||||| |||| | ||||||    
T  34725192 acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaaca 34725247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 4349796 - 4349718
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    |||||||||||| ||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  4349796 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgca 4349718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 240 - 368
Target Start/End: Original strand, 25468285 - 25468414
Alignment:
Q  240 agctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttacacaagaggttgttttcagaactta 338  Q
    |||| |||||||||||| ||| |||||| ||||| |||||||||||||||||||||||  ||||| || | ||||||||||||||||||| ||| ||||     
T  25468285 agctcccgcatacgcagggtctgggaagaggtccaaccatttggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttccaggacttg 25468384  T
Q  339 aacccatggcttttcaatcacgtaacaaca 368  Q
    |||||||| | |||||||||| | ||||||    
T  25468385 aacccatgacctttcaatcacatgacaaca 25468414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 215 - 343
Target Start/End: Original strand, 32632554 - 32632682
Alignment:
Q  215 ataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttac 314  Q
    ||||||||| ||||  ||||||| ||||| ||||||| |||| ||  |||||||||||||||||||||||||||||||||||   ||||| ||| |||||    
T  32632554 ataaaagggaaacctggtgcactcaagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttac 32632653  T
Q  315 acaagaggttgttttcagaacttaaaccc 343  Q
    |||||||| ||||| ||| |||| |||||    
T  32632654 acaagaggctgtttccaggacttgaaccc 32632682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 217 - 368
Target Start/End: Complemental strand, 27201808 - 27201654
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca--tttggtgtattgtacgcaatgttaccttgtat-tta 313  Q
    |||||||||||||| |||||| ||||| |||||||||||  |||||||||||||||||||||  ||||||||||||||||||   ||||| ||| | | |    
T  27201808 aaaagggcaacccaatgcactaaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttctga 27201709  T
Q  314 cacaagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    ||||||||| ||||| ||| |||| |||||||| | ||||| |||| | ||||||    
T  27201708 cacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaaca 27201654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 217 - 328
Target Start/End: Original strand, 35253186 - 35253296
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    |||||||||| || |||||||  |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||   ||||| ||| |||||||    
T  35253186 aaaagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-tttacac 35253284  T
Q  317 aagaggttgttt 328  Q
    |||||| |||||    
T  35253285 aagaggctgttt 35253296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 216 - 342
Target Start/End: Original strand, 41319804 - 41319931
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttac 314  Q
    ||||||||||||||||||||||||| || ||||||| | || || ||||||||||||||| ||||||||||||||||||||   ||||| || | |||||    
T  41319804 taaaagggcaacccagtgcactgaaactcccgcatatgaagggttcgggaaggggtcccatcatttggtgtattgtacgcagccttaccctgttttttac 41319903  T
Q  315 acaagaggttgttttcagaacttaaacc 342  Q
    |||||||  ||||| ||| |||||||||    
T  41319904 acaagagactgtttccaggacttaaacc 41319931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 221 - 296
Target Start/End: Complemental strand, 45402251 - 45402176
Alignment:
Q  221 gggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||||||| ||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  45402251 gggcaacccggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttggtgtattgtacgca 45402176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 221 - 343
Target Start/End: Complemental strand, 46991959 - 46991836
Alignment:
Q  221 gggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttacacaag 319  Q
    ||||||||| ||||||| ||||| || ||||||||| ||||||||||||||||||||||| |||||||||||| ||   ||||| || | ||||||||||    
T  46991959 gggcaacccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagccttaccctgttttttacacaag 46991860  T
Q  320 aggttgttttcagaacttaaaccc 343  Q
    ||||||||| ||| |||| |||||    
T  46991859 aggttgtttccaggacttgaaccc 46991836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 215 - 321
Target Start/End: Complemental strand, 27474441 - 27474335
Alignment:
Q  215 ataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttac 314  Q
    |||||||||||| || ||||||| ||||| |||||||||||| |||||||||||||||||||||||  ||||||||||||||   || || ||| |||||    
T  27474441 ataaaagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattcagtgtattgtacgcagctttgccctgtttttac 27474342  T
Q  315 acaagag 321  Q
    |||||||    
T  27474341 acaagag 27474335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 11596649 - 11596560
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagaggttgttt 328  Q
    ||||| |||||||||||| |||| ||||||||||||||||||||||||||| ||||||   ||||| ||| |||||||||||||||||||    
T  11596649 aagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttttacacaagaggttgttt 11596560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 216 - 361
Target Start/End: Complemental strand, 35005285 - 35005137
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca--tttggtgtattgtacgcaatgttaccttg-tattt 312  Q
    |||||||||||||| ||||||| ||||  |||||||||||| |||||||||||||||||||||  |||||||||||||| |||   ||||| || | |||    
T  35005285 taaaagggcaacccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtttttt 35005186  T
Q  313 acacaagaggttgttttcagaacttaaacccatggcttttcaatcacgt 361  Q
    |||||||||| ||||||||  |||| ||||| || | ||||| ||||||    
T  35005185 acacaagaggctgttttcaagacttgaacccgtgacctttcagtcacgt 35005137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 19414597 - 19414517
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    |||||||||||||| |||||||  |||| ||||||| |||| || ||||||||||||||||||||||||||||||||||||    
T  19414597 taaaagggcaacccggtgcactagagctcccgcatatgcagggtacgggaaggggtcccaccatttggtgtattgtacgca 19414517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 328
Target Start/End: Original strand, 31382213 - 31382324
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    ||||||||||||| || || | ||||| ||||||| |||| |||| ||||||||||||||||||||||||||||||||||   ||| | ||| |||||||    
T  31382213 aaaagggcaacccggtacagtaaagctcccgcatatgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttatcctgtttttacac 31382312  T
Q  317 aagaggttgttt 328  Q
    |||||| |||||    
T  31382313 aagaggctgttt 31382324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 328
Target Start/End: Original strand, 38478281 - 38478391
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    ||||||||||||| |||||||  |||| ||||||| |||| ||||| |||||||| ||||||||||||||||||||||||   ||||| ||| |||||||    
T  38478281 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgagaaggggttccaccatttggtgtattgtacgcagccttaccctgt-tttacac 38478379  T
Q  317 aagaggttgttt 328  Q
    |||||| |||||    
T  38478380 aagaggctgttt 38478391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 239 - 332
Target Start/End: Complemental strand, 30682949 - 30682857
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagaggttgttttcag 332  Q
    ||||| |||||||||||  ||||||||||||||||||||||||| |||| ||||| |||| ||||||||| ||||||||||||| | |||||||    
T  30682949 aagctcccgcatacgcacggtccgggaaggggtcccaccatttgttgta-tgtacacaatcttaccttgtttttacacaagaggctattttcag 30682857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 217 - 328
Target Start/End: Complemental strand, 18944805 - 18944690
Alignment:
Q  217 aaaagggcaacccagtgcactgaa-gctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgcaatgttaccttg-tattt 312  Q
    ||||||||||||| ||||||| || ||| |||||||||||| ||||||||||||||||||||||  |||||||||||||||||   ||||| || | |||    
T  18944805 aaaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtacgcagccttaccctgtttttt 18944706  T
Q  313 acacaagaggttgttt 328  Q
    |||||||||| |||||    
T  18944705 acacaagaggctgttt 18944690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 215 - 343
Target Start/End: Original strand, 20004087 - 20004218
Alignment:
Q  215 ataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgcaatgttaccttg-tatt 311  Q
    ||||||||||||||| ||||||| ||||| ||||||| || | ||| ||||||||||||||||||  |||||||||||||||||   |||||||| | ||    
T  20004087 ataaaagggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttt 20004186  T
Q  312 tacacaagaggttgttttcagaacttaaaccc 343  Q
    ||||| ||||| ||||| ||| |||| |||||    
T  20004187 tacacgagaggctgtttccaggacttgaaccc 20004218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 247 - 368
Target Start/End: Complemental strand, 20036350 - 20036227
Alignment:
Q  247 gcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttacc--ttgtatttacacaagaggttgttttcagaacttaaaccca 344  Q
    |||||||||| |||||||||||||| |||||||||||||||||| ||||||| |||||  || | |||||||||||| |||||| ||| |||| |||||     
T  20036350 gcatacgcagggtccgggaaggggttccaccatttggtgtattgaacgcaatcttaccctttctctttacacaagagtttgtttccaggacttgaacccg 20036251  T
Q  345 tggcttttcaatcacgtaacaaca 368  Q
    || | ||||| |||| | ||||||    
T  20036250 tgacctttcagtcacatgacaaca 20036227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 217 - 328
Target Start/End: Complemental strand, 23796624 - 23796512
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttaca 315  Q
    ||||||||| ||| ||||||| ||||| | ||||| |||| ||| ||||||||||| ||||||||||||||||||||||||  |||| ||| | ||||||    
T  23796624 aaaagggcagcccggtgcactaaagctccagcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgcaaccttacattgatttttaca 23796525  T
Q  316 caagaggttgttt 328  Q
    ||||||| |||||    
T  23796524 caagaggctgttt 23796512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 215 - 343
Target Start/End: Original strand, 30395723 - 30395854
Alignment:
Q  215 ataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgcaatgttaccttg-tatt 311  Q
    ||||||||||||| | ||||||| ||||| ||||||| || | ||||||||||||||||||||||  |||||||||||||||||   ||||| || | ||    
T  30395723 ataaaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttt 30395822  T
Q  312 tacacaagaggttgttttcagaacttaaaccc 343  Q
    ||||||||||| ||||| ||| |||| |||||    
T  30395823 tacacaagaggctgtttccaggacttgaaccc 30395854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 1517310 - 1517389
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||||||||||| ||||||| ||||| | |||||||||| ||| | ||||||||||||||| |||||||||||||||||    
T  1517310 aaaagggcaacccggtgcactaaagctcctgcatacgcagggtctgagaaggggtcccaccaattggtgtattgtacgca 1517389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 4587568 - 4587630
Alignment:
Q  223 gcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtg 285  Q
    ||||||| ||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||    
T  4587568 gcaacccggtgcactgaagctcccgcataggcagggtccgggaaggggtcccaccatttggtg 4587630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 6983808 - 6983889
Alignment:
Q  215 ataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||||||||| ||| ||||||  ||||| | || ||||||| |||||| ||||||||||||||||||||||||||||||||    
T  6983808 ataaaagggcagcccggtgcaccaaagctcctgcctacgcagggtccggaaaggggtcccaccatttggtgtattgtacgca 6983889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 15505701 - 15505644
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  15505701 aagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgca 15505644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 232 - 328
Target Start/End: Original strand, 23768334 - 23768431
Alignment:
Q  232 tgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttacacaagaggttgttt 328  Q
    |||||| ||||| |||||||||||| ||| ||||||| |||||||||||||||||||||||||||   ||||| || | ||||||||||||| |||||    
T  23768334 tgcactaaagctcccgcatacgcagggtctgggaaggtgtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgttt 23768431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 231 - 368
Target Start/End: Complemental strand, 47214654 - 47214518
Alignment:
Q  231 gtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagaggttgttttc 330  Q
    |||||||  |||| ||||||| |||| ||| ||||||||||||||||||||||||||||||||||||  ||||| ||| |||| |||||||  ||||| |    
T  47214654 gtgcactagagctcccgcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgt-tttaaacaagagactgtttcc 47214556  T
Q  331 agaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    || |||| ||||| || | ||||| |||| | ||||||    
T  47214555 aggacttgaacccgtgacctttcagtcacatgacaaca 47214518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 281
Target Start/End: Complemental strand, 50606562 - 50606498
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccattt 281  Q
    ||||||||||||| ||||||| ||||| ||||||| |||| ||||||||||||||||||||||||    
T  50606562 aaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattt 50606498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 6925259 - 6925180
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    |||| |||||| | ||||||| ||||| |||||||||||| | ||||||||||||||||||||| |||||||||| ||||    
T  6925259 aaaaaggcaactcggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattcggtgtattgtccgca 6925180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 221 - 296
Target Start/End: Original strand, 10378738 - 10378813
Alignment:
Q  221 gggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||| ||| ||||||| ||||| ||||||| |||| ||||  |||||||||||||||||||||||||||||||||    
T  10378738 gggcagcccggtgcactaaagctcccgcatatgcagggtccaagaaggggtcccaccatttggtgtattgtacgca 10378813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 217 - 297
Target Start/End: Original strand, 42304206 - 42304288
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca--tttggtgtattgtacgcaa 297  Q
    |||||||||| || ||||||| ||||| || ||||||||| |||||||||||||||||||||  ||| |||||||||||||||    
T  42304206 aaaagggcaatccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattttttgtgtattgtacgcaa 42304288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 216 - 337
Target Start/End: Complemental strand, 9939624 - 9939499
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaa-ggggtcccacca--tttggtgtattgtacgcaatgttaccttgtat-t 311  Q
    |||||||| ||||| ||||||| ||||| |||||||||||| ||||| ||| ||||||||||||  |||||||||||| ||||||  ||||| ||| | |    
T  9939624 taaaagggtaacccggtgcactaaagctcccgcatacgcagggtccgagaagggggtcccaccatttttggtgtattgcacgcaaccttaccatgtttct 9939525  T
Q  312 tacacaagaggttgttttcagaactt 337  Q
    || |||||||||||||| ||| ||||    
T  9939524 taaacaagaggttgtttccaggactt 9939499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 18741956 - 18742037
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca--tttggtgtattgtacgca 296  Q
    ||||||| ||||| ||||||| |||||  ||||||||||| ||| |||||||||||||||||  ||||||||||||||||||    
T  18741956 aaaagggaaacccggtgcactaaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggtgtattgtacgca 18742037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 231 - 343
Target Start/End: Complemental strand, 19701716 - 19701602
Alignment:
Q  231 gtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca-tttggtgtattgtacgcaatgttaccttg-tatttacacaagaggttgttt 328  Q
    ||||||| ||||| |||||||||||| ||||||||||||| ||||||| ||||||||||||||| ||   |||||  | | ||||||||||||| |||||    
T  19701716 gtgcactaaagctcccgcatacgcagggtccgggaaggggccccaccattttggtgtattgtacccatccttaccaagttttttacacaagaggctgttt 19701617  T
Q  329 tcagaacttaaaccc 343  Q
    |||  ||||||||||    
T  19701616 tcatgacttaaaccc 19701602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 239 - 368
Target Start/End: Original strand, 44485130 - 44485260
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgt-atttacacaagaggttgttttcagaactt 337  Q
    ||||| ||||||||| ||  ||||||||||||||| ||||||||||||||||||||||   ||||| |||  |||||||||| |||||||| ||| |||     
T  44485130 aagctcccgcatacgtaggatccgggaaggggtccaaccatttggtgtattgtacgcagccttaccatgtcttttacacaagtggttgtttccaggacta 44485229  T
Q  338 aaacccatggcttttcaatcacgtaacaaca 368  Q
     ||||| || | |||||||||| | ||||||    
T  44485230 taacccgtgacctttcaatcacatgacaaca 44485260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 342
Target Start/End: Original strand, 45812536 - 45812660
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    |||| |||||||| |||||||  |||| ||||||| |||| ||  ||||||||||||||||||||||||||||||| |||   ||||| | | |||||||    
T  45812536 aaaaaggcaacccggtgcactagagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtatgcagccttaccctct-tttacac 45812634  T
Q  317 aagaggttgttttcagaacttaaacc 342  Q
    |||||  ||||||||| |||| ||||    
T  45812635 aagagactgttttcaggacttgaacc 45812660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 20999848 - 20999928
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    |||||||||| ||| ||||||| ||||| |||| ||||||| || | |||||||| |||| ||||||||||||||||||||    
T  20999848 taaaagggcagcccggtgcactaaagctcccgcgtacgcagggtgccggaaggggccccatcatttggtgtattgtacgca 20999928  T

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Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 225 - 296
Target Start/End: Original strand, 31442396 - 31442468
Alignment:
Q  225 aacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca-tttggtgtattgtacgca 296  Q
    ||||| ||||||  ||||| || ||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  31442396 aacccggtgcaccaaagctcccacatacacagtgtccgggaaggggtcccaccattttggtgtattgtacgca 31442468  T

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Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 368
Target Start/End: Original strand, 22930104 - 22930218
Alignment:
Q  253 gcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagaggttgttttcagaacttaaacccatggctttt 352  Q
    |||| |||| ||||||||||||||||||||||||||||| | |||  ||||| ||| ||||||||| ||| ||||| ||| |||| |||||||| | |||    
T  22930104 gcagggtccaggaaggggtcccaccatttggtgtattgt-cacaaccttaccctgtttttacacaaaaggctgtttccaggacttgaacccatgaccttt 22930202  T
Q  353 caatcacgtaacaaca 368  Q
    || |||| | ||||||    
T  22930203 cagtcacatgacaaca 22930218  T

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Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 368
Target Start/End: Original strand, 27136696 - 27136803
Alignment:
Q  263 ggaaggggtcccaccattt-ggtgtattgtacgcaatgttaccttgtattt-acacaagaggttgttttcagaacttaaacccatggcttttcaatcacg 360  Q
    ||||||||||||||||||| ||||||||||||||||  ||||| ||| ||| |||||||||||||||  |||||||| ||| | || | || ||||||||    
T  27136696 ggaaggggtcccaccattttggtgtattgtacgcaaccttaccatgttttttacacaagaggttgttcccagaacttgaactcgtgtccttccaatcacg 27136795  T
Q  361 taacaaca 368  Q
    | ||||||    
T  27136796 tgacaaca 27136803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 283
Target Start/End: Original strand, 33594129 - 33594196
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttgg 283  Q
    |||||||| | ||||||||||| ||||| |||||||||||| ||| ||||||||||||||||| ||||    
T  33594129 taaaagggtagcccagtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccaattgg 33594196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 292
Target Start/End: Complemental strand, 43768298 - 43768223
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgta 292  Q
    ||||||||| ||| ||||| | ||||| ||| |||||||| ||| ||||||||||||||||| |||||||||||||    
T  43768298 aaaagggcagcccggtgcattaaagctcccgtatacgcagggtctgggaaggggtcccaccaattggtgtattgta 43768223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 216 - 297
Target Start/End: Original strand, 19974072 - 19974154
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccattt-ggtgtattgtacgcaa 297  Q
    |||||||||| ||| ||||||| ||||| ||||||||  || ||||||||| |||||||| ||||| ||||||||||||||||    
T  19974072 taaaagggcagccccgtgcactaaagctcccgcatacatagagtccgggaatgggtcccatcattttggtgtattgtacgcaa 19974154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 294
Target Start/End: Complemental strand, 8197202 - 8197125
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacg 294  Q
    ||||||||||||| || |||| ||||| |  ||||||||| ||||| |||||||||| ||||||||||||| ||||||    
T  8197202 aaaagggcaacccggtacactaaagctccaacatacgcagggtccgagaaggggtcctaccatttggtgtactgtacg 8197125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 322
Target Start/End: Original strand, 21910692 - 21910753
Alignment:
Q  261 cgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagagg 322  Q
    |||||||||||||||||||||||||||||||||||||  ||||| | | |||||| ||||||    
T  21910692 cgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctatttttacataagagg 21910753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 297
Target Start/End: Complemental strand, 50812099 - 50812019
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccattt-ggtgtattgtacgcaa 297  Q
    ||||||||| ||||||||| | ||||| |||||||||||| |  ||||||||||||| ||||||| ||||||||||||||||    
T  50812099 aaaagggcagcccagtgcattaaagctcccgcatacgcagggcgcgggaaggggtcc-accattttggtgtattgtacgcaa 50812019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 296
Target Start/End: Original strand, 19932782 - 19932833
Alignment:
Q  247 gcatacgcagtgtccgggaaggggtcccacca--tttggtgtattgtacgca 296  Q
    |||||||||| |||||||||||||||||||||  ||||||||||||||||||    
T  19932782 gcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgca 19932833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 218 - 368
Target Start/End: Original strand, 35117765 - 35117919
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcat-acgcagtgtccgggaaggggtcccacca--tttggtgtattgtacgcaatgttaccttgta-ttta 313  Q
    |||||| | ||| ||||||| ||||| | |||| |||||| |||||||||||||||||| ||  ||||||||||||||| ||   ||||| |||| ||||    
T  35117765 aaagggaagcccggtgcactaaagctcctgcattacgcagggtccgggaaggggtcccatcatttttggtgtattgtacacagccttaccctgtatttta 35117864  T
Q  314 cacaagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    ||||||||| | ||| ||| |||| ||||| || | ||||| |||||| ||||||    
T  35117865 cacaagaggctatttccaggacttgaacccgtgacctttcagtcacgtgacaaca 35117919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 368
Target Start/End: Original strand, 18724566 - 18724696
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttacacaagaggttgttttcagaactt 337  Q
    ||||| ||||||| | || ||||||||||||||||||  |||||||||||||||| ||   ||||| || | ||||||||||||| ||||| ||| ||||    
T  18724566 aagctcccgcatatgtagggtccgggaaggggtcccaagatttggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggactt 18724665  T
Q  338 aaacccatggcttttcaatcacgtaacaaca 368  Q
     ||||| || | ||||| |||| | ||||||    
T  18724666 gaacccgtgacctttcagtcacatgacaaca 18724696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 332
Target Start/End: Original strand, 20169110 - 20169204
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttacc-ttgtatttacacaagaggttgttttcag 332  Q
    ||||| ||||||| |||| ||||||||||| ||||||||  |||| ||||||||| || | ||||| || | ||||||||||||| |||||||||    
T  20169110 aagctcccgcatatgcagggtccgggaaggagtcccaccgattggggtattgtacacagtcttacctttttttttacacaagagggtgttttcag 20169204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 293
Target Start/End: Complemental strand, 23371267 - 23371206
Alignment:
Q  231 gtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtac 293  Q
    ||||||| |||||||| ||||||||| ||| || ||||||||||| |||||||||||||||||    
T  23371267 gtgcactaaagctaccacatacgcagggtctgg-aaggggtcccagcatttggtgtattgtac 23371206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 4249464 - 4249520
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgc 295  Q
    ||||| |||||||| ||  || ||||||||| |||||||||||||||||||||||||    
T  4249464 aagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgc 4249520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 4249788 - 4249844
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgc 295  Q
    ||||| |||||||| ||  || ||||||||| |||||||||||||||||||||||||    
T  4249788 aagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgc 4249844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 4250112 - 4250168
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgc 295  Q
    ||||| |||||||| ||  || ||||||||| |||||||||||||||||||||||||    
T  4250112 aagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgc 4250168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 281
Target Start/End: Complemental strand, 30555274 - 30555210
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccattt 281  Q
    |||||| || ||| ||||||| |||||  ||||||||||| ||||| ||||||||||||||||||    
T  30555274 aaaaggtcagcccggtgcactaaagctctcgcatacgcagggtccgtgaaggggtcccaccattt 30555210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 368
Target Start/End: Original strand, 2435799 - 2435938
Alignment:
Q  231 gtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca-tttggtgtattgtacgcaatgttaccttgtattt-acacaagaggttgttt 328  Q
    ||||||| ||||| |||||| || || || ||| |||||||||||||| ||||||||||||||||||   ||||| | | ||| ||||| |||| |||||    
T  2435799 gtgcactaaagctcccgcatgcggagggtacggaaaggggtcccaccattttggtgtattgtacgcaggcttaccctatttttcacacaggaggctgttt 2435898  T
Q  329 tcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
     ||| |||| ||||| || | ||||| |||||| ||||||    
T  2435899 ccaggacttgaacccgtgacctttcagtcacgtgacaaca 2435938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 296
Target Start/End: Original strand, 4430014 - 4430077
Alignment:
Q  233 gcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||| ||||| |||||||| |||  ||| | ||||||| ||||||||||||||||||||||||    
T  4430014 gcactaaagctcccgcatacacaggatccagaaaggggttccaccatttggtgtattgtacgca 4430077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 292
Target Start/End: Complemental strand, 35019388 - 35019314
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgta 292  Q
    |||| |||| ||| ||||||| |||||  ||||||||||| ||| |||| |||||||||||| |||||||||||||    
T  35019388 aaaatggcagcccggtgcactaaagctctcgcatacgcagggtctggga-ggggtcccaccaattggtgtattgta 35019314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 296
Target Start/End: Complemental strand, 6358251 - 6358201
Alignment:
Q  247 gcatacgcagtgtccgggaaggggtcccacca-tttggtgtattgtacgca 296  Q
    |||||||||| ||| ||||||||||||||||| |||||||| |||||||||    
T  6358251 gcatacgcagggtctgggaaggggtcccaccattttggtgttttgtacgca 6358201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 341
Target Start/End: Complemental strand, 10163867 - 10163793
Alignment:
Q  268 gggtcccaccatttggtgtattgtacgcaatgtta-ccttgtatttacacaagaggttgttttcagaacttaaac 341  Q
    ||||||||||||||| |||||||||  |||| ||| | |  | |||||| |||||||||||||||||||||||||    
T  10163867 gggtcccaccatttgatgtattgtatacaatcttatcatattttttacataagaggttgttttcagaacttaaac 10163793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 267 - 328
Target Start/End: Complemental strand, 33223093 - 33223031
Alignment:
Q  267 ggggtcccaccattt-ggtgtattgtacgcaatgttaccttgtatttacacaagaggttgttt 328  Q
    ||||||||||||||| ||||||||||||||||  || || ||| ||||||||||||| |||||    
T  33223093 ggggtcccaccattttggtgtattgtacgcaacctttccctgtttttacacaagaggctgttt 33223031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 272 - 343
Target Start/End: Original strand, 4430080 - 4430152
Alignment:
Q  272 cccaccatttggtgtattgtacgcaatgttaccttg-tatttacacaagaggttgttttcagaacttaaaccc 343  Q
    ||||||||||||||||||||||||| | ||||| || | |||||||||||   ||||||||  ||||||||||    
T  4430080 cccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagatactgttttcaagacttaaaccc 4430152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 328
Target Start/End: Complemental strand, 22325038 - 22324940
Alignment:
Q  231 gtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccattt--ggtgtattgtacgcaatgttaccttgtatttacacaagaggttgttt 328  Q
    ||||||| ||||| |||||||||||| ||| |||| ||||  |||||||||  ||||||||||| |||   ||||| ||| ||||||||||||| |||||    
T  22325038 gtgcactaaagctcccgcatacgcagggtc-gggacggggctccaccatttttggtgtattgtatgcagccttaccctgtttttacacaagaggctgttt 22324940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 290
Target Start/End: Original strand, 45264412 - 45264472
Alignment:
Q  231 gtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca-tttggtgtattg 290  Q
    ||||||| ||||| ||||||| |||| ||| | ||||||||||||||| ||||||||||||    
T  45264412 gtgcactaaagctcccgcatatgcagggtctgagaaggggtcccaccattttggtgtattg 45264472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 9e-28; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 217 - 368
Target Start/End: Original strand, 19142942 - 19143093
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    |||||||||  |||||||||| || || |||||||||||  |||||||||||||||||||||||||||||| ||||||||   ||||| ||| |||||||    
T  19142942 aaaagggcaggccagtgcactaaatctcccgcatacgcatggtccgggaaggggtcccaccatttggtgtactgtacgcagccttaccctgtttttacac 19143041  T
Q  317 aagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    |||||||||||| ||| |||| ||||  |||| ||| | |||||| ||||||    
T  19143042 aagaggttgtttccaggacttgaacctgtggcattttagtcacgtgacaaca 19143093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 216 - 343
Target Start/End: Complemental strand, 32703559 - 32703433
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttaca 315  Q
    |||||||||||||| |||||||  |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||   ||||| ||| ||||||    
T  32703559 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-tttaca 32703461  T
Q  316 caagaggttgttttcagaacttaaaccc 343  Q
    ||||||| ||||| ||| |||| |||||    
T  32703460 caagaggctgtttccaggacttgaaccc 32703433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 216 - 343
Target Start/End: Complemental strand, 41014455 - 41014328
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttaca 315  Q
    |||||||||||||| ||||||| ||||| ||||||| || | |||| ||||||||||||||||||||||||||||||||||   ||||| ||| ||||||    
T  41014455 taaaagggcaacccggtgcactaaagctcccgcatatgcggggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttaca 41014356  T
Q  316 caagaggttgttttcagaacttaaaccc 343  Q
    ||||||| ||||| ||| |||| |||||    
T  41014355 caagaggctgtttccaggacttgaaccc 41014328  T

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Target: chr5; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 217 - 343
Target Start/End: Original strand, 8169983 - 8170108
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    ||||||||||||| |||||||||| || ||||||| |||| |||||||||||||||||||||||||||||||||||||||   ||||| ||| |||||||    
T  8169983 aaaagggcaacccggtgcactgaaactcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-tttacac 8170081  T
Q  317 aagaggttgttttcagaacttaaaccc 343  Q
    || ||| ||||| ||| |||| |||||    
T  8170082 aaaaggctgtttccaggacttgaaccc 8170108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 216 - 293
Target Start/End: Complemental strand, 16957451 - 16957374
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtac 293  Q
    |||||||||||||| ||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16957451 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtac 16957374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 231 - 330
Target Start/End: Original strand, 7097773 - 7097872
Alignment:
Q  231 gtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagaggttgttttc 330  Q
    ||||||| ||||| |||||||||||| || |||||||||||| ||||||||||||||||||||||||  ||||| ||| ||||||||||||| |||||||    
T  7097773 gtgcactaaagctcccgcatacgcagggttcgggaaggggtctcaccatttggtgtattgtacgcaaccttaccctgtttttacacaagaggctgttttc 7097872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 24449026 - 24448947
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||||||||||| ||||||| ||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24449026 aaaagggcaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgca 24448947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 34154814 - 34154892
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    |||||||||||| |||||||  |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  34154814 aaagggcaacccggtgcactagagctaccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgca 34154892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 368
Target Start/End: Complemental strand, 38879720 - 38879565
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgcaatgttaccttg-tattt 312  Q
    |||||||||||||| ||||||| ||||| |||||||||||| ||||||||||||||||||||||  |||||||||||||||||   ||||| || | |||    
T  38879720 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 38879621  T
Q  313 acacaagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    | |||||||| ||||| ||| |||| ||||| || | ||||| |||| | ||||||    
T  38879620 atacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaaca 38879565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 215 - 320
Target Start/End: Complemental strand, 2838915 - 2838811
Alignment:
Q  215 ataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttac 314  Q
    |||||||||||| ||| ||||| || ||| |||||||||||| ||||| |||||| ||||||||||||||||||||||||||   ||||| ||| |||||    
T  2838915 ataaaagggcaatcca-tgcaccgatgctcccgcatacgcagggtccgagaagggatcccaccatttggtgtattgtacgcagccttaccctgtttttac 2838817  T
Q  315 acaaga 320  Q
    ||||||    
T  2838816 acaaga 2838811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 219 - 328
Target Start/End: Complemental strand, 20135740 - 20135628
Alignment:
Q  219 aagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgcaatgttaccttg-tatttaca 315  Q
    ||||||||||| ||||||||||||| | ||||| || | ||||||||||||||||||||||  |||||||||||||||||   |||||||| | ||||||    
T  20135740 aagggcaacccggtgcactgaagctcctgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttaca 20135641  T
Q  316 caagaggttgttt 328  Q
    ||||||| |||||    
T  20135640 caagaggctgttt 20135628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 221 - 337
Target Start/End: Complemental strand, 7368528 - 7368413
Alignment:
Q  221 gggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaaga 320  Q
    ||||||||| |||||||  |||| || |||| |||| ||||||||||||||||||||| |||||||||||||||||   ||||| ||| |||||||||||    
T  7368528 gggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagccttaccctgt-tttacacaaga 7368430  T
Q  321 ggttgttttcagaactt 337  Q
    || ||||| ||| ||||    
T  7368429 ggctgtttccaggactt 7368413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 43574720 - 43574621
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatt-tacacaagaggttgttttcagaactt 337  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||   ||||| ||| || |||||||||| |||||| ||| ||||    
T  43574720 aagctcccgcatacgcagggtccgggaaggggtcccaccatttggtatattgtacgcagccttaccctgttttctacacaagagattgtttccaggactt 43574621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 16880647 - 16880725
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    |||||| ||||| ||||||| ||||| |||||||||||  |||||||||| |||| |||||||||||||||||||||||    
T  16880647 aaagggaaacccggtgcactaaagctcccgcatacgcatggtccgggaagtggtcacaccatttggtgtattgtacgca 16880725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 217 - 343
Target Start/End: Complemental strand, 35710447 - 35710322
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    ||||||||||||| |||||||  |||| ||||||| |||   |||||||||||||||||||||||||||||||| |||||   ||||| | | |||||||    
T  35710447 aaaagggcaacccggtgcactagagctcccgcatatgcatgttccgggaaggggtcccaccatttggtgtattgaacgcagccttaccctat-tttacac 35710349  T
Q  317 aagaggttgttttcagaacttaaaccc 343  Q
    |||||| ||||| ||| |||| |||||    
T  35710348 aagaggctgtttccaggacttgaaccc 35710322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 43334340 - 43334260
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca--tttggtgtattgtacgca 296  Q
    ||||||||||||| ||||||| ||||| |||||| ||||| |||||||||||||||||||||  ||||||||||||||||||    
T  43334340 aaaagggcaacccggtgcactaaagctcccgcat-cgcagggtccgggaaggggtcccaccatttttggtgtattgtacgca 43334260  T

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Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 4619101 - 4619184
Alignment:
Q  215 ataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgca 296  Q
    ||||||||||||||| ||||||| |||||  |||||| || | ||||||||||||||||||||||  |||||||||||||||||    
T  4619101 ataaaagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgca 4619184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 216 - 291
Target Start/End: Complemental strand, 3771476 - 3771401
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgt 291  Q
    |||||||||| ||| ||||||| ||||| || ||||| ||| ||||||||||||||||||||| ||||||||||||    
T  3771476 taaaagggcagcccggtgcactaaagctcccacatacacagagtccgggaaggggtcccaccaattggtgtattgt 3771401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 1565566 - 1565489
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    |||||||||||| ||||||| ||||| || |||| |||| ||||||||||||||||| |||||||||| ||||||||||    
T  1565566 aaagggcaacccggtgcact-aagctcccacatatgcagggtccgggaaggggtcccgccatttggtgcattgtacgca 1565489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 344
Target Start/End: Original strand, 13801767 - 13801896
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgcaatgttaccttg-tatttac 314  Q
    |||||||||||| ||||||| |||||  |||||| || | ||||||||||||||||||||||  |||||||||||||||||   ||||| || | |||||    
T  13801767 aaagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttac 13801866  T
Q  315 acaagaggttgttttcagaacttaaaccca 344  Q
    |||||||| || || ||| |||| ||||||    
T  13801867 acaagaggctgcttccaggacttgaaccca 13801896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 280
Target Start/End: Complemental strand, 25622595 - 25622533
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatt 280  Q
    ||||||||| || ||||||| ||||| |||||||||||| |||||||||||||||||||||||    
T  25622595 aaagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 25622533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 216 - 328
Target Start/End: Complemental strand, 29334533 - 29334419
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatt-tggtgtattgtacgcaatgttaccttg-tattta 313  Q
    |||||||||| ||| ||||| | ||| | || ||||||||| ||||||||| ||||||||||||| ||||||||||||||||   |||||||| | ||||    
T  29334533 taaaagggcagcccggtgcattaaagatcccacatacgcagggtccgggaatgggtcccaccattctggtgtattgtacgcagccttaccttgtttttta 29334434  T
Q  314 cacaagaggttgttt 328  Q
    ||||||||| |||||    
T  29334433 cacaagaggctgttt 29334419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 231 - 371
Target Start/End: Complemental strand, 1850761 - 1850621
Alignment:
Q  231 gtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagaggttgttttc 330  Q
    ||||||| ||||| |||||| ||||| |||| ||||| |||||||||||||| |||||||||||||   |||   ||| ||||||||||||||| ||| |    
T  1850761 gtgcactaaagcttccgcatccgcagggtccaggaagtggtcccaccatttgatgtattgtacgcacccttattctgtttttacacaagaggttatttcc 1850662  T
Q  331 agaacttaaacccatggcttttcaatcacgtaacaacatta 371  Q
     | |||| ||||| || | ||||| |||| | |||||||||    
T  1850661 gggacttgaacccgtgacctttcagtcacatgacaacatta 1850621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 218 - 297
Target Start/End: Original strand, 12575660 - 12575740
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca-tttggtgtattgtacgcaa 297  Q
    |||||||| ||| ||||||  ||||| | |||||||||| |||| |||||||||||||||| |||||||||||||||||||    
T  12575660 aaagggcagcccggtgcaccaaagctcctgcatacgcagggtccaggaaggggtcccaccattttggtgtattgtacgcaa 12575740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 218 - 337
Target Start/End: Original strand, 24323706 - 24323825
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgt-atttacac 316  Q
    ||||||||  |||||||||  ||||| |||||||  ||| ||| ||||||||||||||| |||||| ||||| |||||||  ||||| |||  |||||||    
T  24323706 aaagggcagtccagtgcaca-aagctcccgcatatacagggtctgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacac 24323804  T
Q  317 aagaggttgttttcagaactt 337  Q
    |||||||||||| ||||||||    
T  24323805 aagaggttgtttccagaactt 24323825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 218 - 337
Target Start/End: Original strand, 24360330 - 24360449
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgt-atttacac 316  Q
    ||||||||  |||||||||  ||||| |||||||  ||| ||| ||||||||||||||| |||||| ||||| |||||||  ||||| |||  |||||||    
T  24360330 aaagggcagtccagtgcaca-aagctcccgcatatacagggtctgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacac 24360428  T
Q  317 aagaggttgttttcagaactt 337  Q
    |||||||||||| ||||||||    
T  24360429 aagaggttgtttccagaactt 24360449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 253 - 368
Target Start/End: Original strand, 24903731 - 24903847
Alignment:
Q  253 gcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgtta-ccttgtatttacacaagaggttgttttcagaacttaaacccatggcttt 351  Q
    |||||||||||||||||||| ||||| |||||| ||||||| |||| ||| |||  | ||||||||| ||| ||||||||| ||||   |||||| ||||    
T  24903731 gcagtgtccgggaaggggtctcaccaattggtggattgtacacaatcttaccctattttttacacaaaaggctgttttcaggacttgtgcccatgacttt 24903830  T
Q  352 tcaatcacgtaacaaca 368  Q
    ||| |||||| ||||||    
T  24903831 tcagtcacgtgacaaca 24903847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 293
Target Start/End: Original strand, 5873322 - 5873397
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtac 293  Q
    |||||||| |||  |||||| ||||| |||||||||||||||||||| ||| ||||||||| |||||||| |||||    
T  5873322 aaagggcatcccgatgcactaaagctcccgcatacgcagtgtccggggaggagtcccaccaattggtgtagtgtac 5873397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 22600568 - 22600514
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtac 293  Q
    ||||| ||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  22600568 aagctcccgcatacgcaggatccgggaagggatcccaccatttggtgtattgtac 22600514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 10306495 - 10306548
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccacca-tttggtgtattgt 291  Q
    ||||| |||||||||||| ||||||||||||||||||||| |||||||||||||    
T  10306495 aagctcccgcatacgcagggtccgggaaggggtcccaccattttggtgtattgt 10306548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 297
Target Start/End: Complemental strand, 1405323 - 1405243
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaa 297  Q
    |||||||||| || ||| |||  |||| ||||||| |||| || | |||| ||||||||||||||||||||||||||||||    
T  1405323 aaaagggcaatccggtgtactagagctcccgcatatgcagggttcaggaaagggtcccaccatttggtgtattgtacgcaa 1405243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 292
Target Start/End: Original strand, 12006329 - 12006404
Alignment:
Q  219 aagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgta 292  Q
    ||||||||| | ||||||| ||||| ||||||| |||| ||| ||||||||||||||||||  |||||||||||||    
T  12006329 aagggcaacacggtgcactaaagctcccgcataggcagggtctgggaaggggtcccaccattattggtgtattgta 12006404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 277
Target Start/End: Original strand, 16028623 - 16028683
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacc 277  Q
    ||||||||||||| |||||||  |||| ||||||| |||| ||||||||||||||||||||    
T  16028623 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacc 16028683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 27328868 - 27328809
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgca 296  Q
    ||||| |||||||||||| || |||||||||||||||||||  |||||||||||||||||    
T  27328868 aagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgca 27328809  T

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Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 21542489 - 21542532
Alignment:
Q  240 agctaccgcatacgcagtgtccgggaaggggtcccaccatttgg 283  Q
    |||| |||||||||||| ||||||||||||||||||||||||||    
T  21542489 agctcccgcatacgcagagtccgggaaggggtcccaccatttgg 21542532  T

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Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 266 - 385
Target Start/End: Original strand, 22907913 - 22908032
Alignment:
Q  266 aggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagaggttgttttcagaacttaaacccatggcttttcaatcacgtaaca 365  Q
    ||||||||||||||||||||||||||| ||||  ||||  ||| ||||||||||||| |||||   | |||| ||||| || | ||||| |||| |||||    
T  22907913 aggggtcccaccatttggtgtattgtatgcaaccttactctgtttttacacaagaggctgtttcttggacttgaacccttgacctttcagtcacataaca 22908012  T
Q  366 acattatcgttgcgccaaag 385  Q
    || |||  ||||| ||||||    
T  22908013 actttactgttgccccaaag 22908032  T

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Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 296
Target Start/End: Original strand, 12477149 - 12477199
Alignment:
Q  247 gcatacgcagtgtccgggaaggggtcccacca-tttggtgtattgtacgca 296  Q
    ||||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  12477149 gcatacgcagaatccgggaaggggtcccaccattttggtgtattgtacgca 12477199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 278
Target Start/End: Complemental strand, 39801653 - 39801591
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca 278  Q
    ||||| |||||||| ||||||| ||||| ||||||||| || ||| |||||||||||||||||    
T  39801653 taaaatggcaacccggtgcactaaagctcccgcatacgtagggtctgggaaggggtcccacca 39801591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 343
Target Start/End: Complemental strand, 41426055 - 41425957
Alignment:
Q  246 cgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttacacaagaggttgttttcagaacttaaaccc 343  Q
    ||||| ||||| ||| ||||||||||||||||| ||||||||||||| |||   ||||| || | ||||||||| | ||||||| |||||||| |||||    
T  41426055 cgcatccgcagagtctgggaaggggtcccaccaattggtgtattgtatgcagccttaccctgttttttacacaataagttgtttccagaacttgaaccc 41425957  T

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Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 337
Target Start/End: Original strand, 42924830 - 42924954
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcag--tgtccgggaaggggtcccaccattt--ggtgtattgtacgcaatgttaccttgtattt- 312  Q
    ||||| ||| || ||||||| ||||| ||||||||||||  |||| |||||||| | ||| |||||  ||||||||||||||||  ||||| ||| |||     
T  42924830 aaaggacaatccggtgcactaaagcttccgcatacgcagggtgtctgggaagggattccatcatttttggtgtattgtacgcaaccttaccctgtttttt 42924929  T
Q  313 acacaagaggttgttttcagaactt 337  Q
    |||||||| ||||||||||| ||||    
T  42924930 acacaagatgttgttttcaggactt 42924954  T

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Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 247 - 327
Target Start/End: Original strand, 208956 - 209037
Alignment:
Q  247 gcatacgcagtgtccgggaaggggtcccacca-tttggtgtattgtacgcaatgttaccttgtatttacacaagaggttgtt 327  Q
    |||||| ||| |||| |||||||||||||||| |||||||||||| | |||   ||||| ||| ||||||||||||||||||    
T  208956 gcatacccagggtccaggaaggggtcccaccattttggtgtattgaatgcagccttaccctgtttttacacaagaggttgtt 209037  T

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Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 296
Target Start/End: Complemental strand, 13774987 - 13774922
Alignment:
Q  231 gtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||||| ||||| |||||||||||| |||||| ||||| |||  |||||||||||||||| ||||    
T  13774987 gtgcactaaagctcccgcatacgcagggtccggaaagggatcctgccatttggtgtattgtgcgca 13774922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 214 - 291
Target Start/End: Original strand, 22861665 - 22861742
Alignment:
Q  214 tataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgt 291  Q
    |||||||||||||  | |||||||  |||| ||||||| |||| || || ||||||||||||||||||| ||||||||    
T  22861665 tataaaagggcaattcggtgcactagagctcccgcatatgcagggttcgagaaggggtcccaccatttgatgtattgt 22861742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 269
Target Start/End: Complemental strand, 32354264 - 32354211
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggg 269  Q
    |||||||||||||| ||||||| ||||| |||||||| ||| ||||||||||||    
T  32354264 taaaagggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggg 32354211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 281
Target Start/End: Original strand, 21784335 - 21784395
Alignment:
Q  221 gggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccattt 281  Q
    ||||||| | ||||||| || || |||||||||||| |||||| |||||||||||||||||    
T  21784335 gggcaactcggtgcactaaacctcccgcatacgcagggtccggaaaggggtcccaccattt 21784395  T

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Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 30006456 - 30006385
Alignment:
Q  222 ggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtac 293  Q
    |||||||| ||||||| ||||| ||||||||  ||   |||||||||||||||||||||| ||||| |||||    
T  30006456 ggcaacccggtgcactaaagctcccgcatacataggccccgggaaggggtcccaccatttagtgtaatgtac 30006385  T

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Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 277
Target Start/End: Original strand, 30877564 - 30877623
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacc 277  Q
    |||||||||||| |||||||  |||| || |||| |||| ||||||||||||||||||||    
T  30877564 aaagggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccacc 30877623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 383
Target Start/End: Complemental strand, 22025585 - 22025512
Alignment:
Q  310 tttacacaagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaacattatcgttgcgccaa 383  Q
    ||||||||||||| ||||| ||| |||| |||||||| | ||||| || ||||||||| ||| |||||| ||||    
T  22025585 tttacacaagaggctgtttccaggacttgaacccatgacctttcagtcgcgtaacaactttaccgttgcaccaa 22025512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 293
Target Start/End: Original strand, 37225960 - 37226037
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca-tttggtgtattgtac 293  Q
    |||||||||| |||||||||| || ||   |||||||||  || |||||||||||||||||| |||| ||||||||||    
T  37225960 aaaagggcaatccagtgcactaaacctctggcatacgcatggttcgggaaggggtcccaccattttgttgtattgtac 37226037  T

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Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 3176770 - 3176833
Alignment:
Q  231 gtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaa 297  Q
    ||||||| ||||| | |||||| ||| |||||||   ||||||||||| ||||||||||||||||||    
T  3176770 gtgcactaaagctccggcatacacagagtccggg---gggtcccaccagttggtgtattgtacgcaa 3176833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 28516432 - 28516512
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca-tttggtgtattgtacgca 296  Q
    ||||||||||||  || |||| ||||| | |||| ||||| ||| ||||| ||||||||||| |||| |||||||||||||    
T  28516432 aaaagggcaacctggtccactaaagctcctgcatgcgcagggtctgggaatgggtcccaccattttgatgtattgtacgca 28516512  T

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Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 293
Target Start/End: Original strand, 39079791 - 39079827
Alignment:
Q  258 gtccgggaaggggtcccacca-tttggtgtattgtac 293  Q
    ||||||||||||||||||||| |||||||||||||||    
T  39079791 gtccgggaaggggtcccaccattttggtgtattgtac 39079827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 4e-27; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 216 - 342
Target Start/End: Original strand, 1354755 - 1354880
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttaca 315  Q
    |||||||||||||| |||||||  |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||   ||||| ||| ||||||    
T  1354755 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-tttaca 1354853  T
Q  316 caagaggttgttttcagaacttaaacc 342  Q
    ||||||| ||||| ||| |||| ||||    
T  1354854 caagaggctgtttccaggacttgaacc 1354880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 217 - 368
Target Start/End: Complemental strand, 1347098 - 1346948
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    ||||||||||||| |||||||  |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||   ||||| ||| |||||||    
T  1347098 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-tttacac 1347000  T
Q  317 aagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    ||| || ||||| ||| |||| ||||| || | ||||| |||| | ||||||    
T  1346999 aagtggctgtttccaggacttgaacccgtgacctttcagtcacatgacaaca 1346948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 217 - 368
Target Start/End: Original strand, 29355854 - 29356008
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgcaatgttaccttgtat-tta 313  Q
    ||||||||||||| ||||||| ||||| |||||||||||| ||||||||||||||||||||||  |||||||||||||||||   ||||| ||| | |||    
T  29355854 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttctta 29355953  T
Q  314 cacaagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    ||||||||| ||||| ||| |||| ||||| || | ||||| |||| | ||||||    
T  29355954 cacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaaca 29356008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 217 - 290
Target Start/End: Complemental strand, 13267861 - 13267788
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattg 290  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||    
T  13267861 aaaagggcaacccggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattg 13267788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 217 - 368
Target Start/End: Original strand, 2166409 - 2166563
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgcaatgttaccttgta-ttta 313  Q
    ||||||||||||| ||||||| ||||| ||| |||   || ||||||||||||||||||||||  ||||||||||||||||||  ||| | |||| ||||    
T  2166409 aaaagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtatttta 2166508  T
Q  314 cacaagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    ||||||||||||||| ||| |||| ||||| || | ||||| |||| ||||||||    
T  2166509 cacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaaca 2166563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 217 - 368
Target Start/End: Original strand, 2178042 - 2178196
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgcaatgttaccttgta-ttta 313  Q
    ||||||||||||| ||||||| ||||| ||| |||   || ||||||||||||||||||||||  ||||||||||||||||||  ||| | |||| ||||    
T  2178042 aaaagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtatttta 2178141  T
Q  314 cacaagaggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    ||||||||||||||| ||| |||| ||||| || | ||||| |||| ||||||||    
T  2178142 cacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaaca 2178196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 220 - 337
Target Start/End: Original strand, 23240826 - 23240942
Alignment:
Q  220 agggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaag 319  Q
    |||||| ||||||||||| ||||| ||||||||||| |||||  ||||||||||||||| ||||| ||||||||||||  ||||| ||| ||||||||||    
T  23240826 agggcagcccagtgcactaaagctcccgcatacgcattgtcctagaaggggtcccaccaattggtatattgtacgcaaacttaccctgt-tttacacaag 23240924  T
Q  320 aggttgttttcagaactt 337  Q
    ||| ||||| ||| ||||    
T  23240925 aggctgtttccaggactt 23240942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 328
Target Start/End: Complemental strand, 26097294 - 26097184
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    ||||||||||||| |||||||  |||| ||||||| |||| |||||||||||||||||  ||||||||||||||||||||   ||||| ||| |||||||    
T  26097294 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccttcatttggtgtattgtacgcagccttaccctgt-tttacac 26097196  T
Q  317 aagaggttgttt 328  Q
    |||||| |||||    
T  26097195 aagaggctgttt 26097184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 23930124 - 23930206
Alignment:
Q  215 ataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaa 297  Q
    ||||||||||||| | ||||||| ||||| ||||||| |||| ||||| |||||||||||||||| |||||||||||||||||    
T  23930124 ataaaagggcaactcggtgcactaaagctcccgcataagcagggtccgtgaaggggtcccaccatctggtgtattgtacgcaa 23930206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 295
Target Start/End: Original strand, 383760 - 383837
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgc 295  Q
    |||||||||||| ||| ||||||||| |||||||||||| ||| | ||||||||||||| ||||||||||||||||||    
T  383760 aaagggcaacccggtggactgaagctcccgcatacgcagggtctgagaaggggtcccacaatttggtgtattgtacgc 383837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 217 - 342
Target Start/End: Complemental strand, 9161260 - 9161133
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgcaatgttaccttgtatttac 314  Q
    ||||||||||||  ||||||| ||||| |||||||||||| ||||| ||||||||||||||||  ||| |||||||||||||   ||||  ||| |||||    
T  9161260 aaaagggcaacctggtgcactaaagcttccgcatacgcagggtccgagaaggggtcccaccattattgatgtattgtacgcagccttactctgtttttac 9161161  T
Q  315 acaagaggttgttttcagaacttaaacc 342  Q
    |||||||| ||||| ||| |||| ||||    
T  9161160 acaagaggctgtttccaggacttgaacc 9161133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 217 - 328
Target Start/End: Original strand, 12221913 - 12222028
Alignment:
Q  217 aaaagggcaacccagtgcactgaa-gctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgcaatgttaccttg-tattt 312  Q
    ||||||||||||| ||||||| || ||| |||||||||||| ||||||||||||||||||||||  |||||||||||||||||   ||||| || | |||    
T  12221913 aaaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 12222012  T
Q  313 acacaagaggttgttt 328  Q
    |||||||||| |||||    
T  12222013 acacaagaggctgttt 12222028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 328
Target Start/End: Complemental strand, 25557859 - 25557749
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    ||||||||||||| |||||||  |||| ||||||| |||| |||||||||||||| ||  ||||||||||||||||||||   ||||| ||| |||||||    
T  25557859 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccttcatttggtgtattgtacgcagccttaccctgt-tttacac 25557761  T
Q  317 aagaggttgttt 328  Q
    |||||| |||||    
T  25557760 aagaggctgttt 25557749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 225 - 296
Target Start/End: Original strand, 3815084 - 3815155
Alignment:
Q  225 aacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||| ||||||| ||||| ||||||||| || || |||||| |||||||||||||||||||||||||||||    
T  3815084 aacccggtgcactaaagcttccgcatacgtagggttcgggaaagggtcccaccatttggtgtattgtacgca 3815155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 217 - 280
Target Start/End: Complemental strand, 6808531 - 6808468
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatt 280  Q
    ||||||||||||| ||||||| ||||| |||||||| ||| |||||||||||||||||||||||    
T  6808531 aaaagggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggggtcccaccatt 6808468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 12886050 - 12885968
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca--tttggtgtattgtacgca 296  Q
    |||||||||||||| ||||||| ||||| || ||||||||| ||| |||||||||||||||||  ||| ||||||||||||||    
T  12886050 taaaagggcaacccggtgcactaaagctcccacatacgcagggtctgggaaggggtcccaccattttttgtgtattgtacgca 12885968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 12892145 - 12892064
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccat--ttggtgtattgtacgca 296  Q
    ||||||||||||| ||||||| ||||| ||||||| || | ||||||||||||||||||||||  |||||||||| ||||||    
T  12892145 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatacgca 12892064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 15866041 - 15866110
Alignment:
Q  220 agggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtatt 289  Q
    |||||||| |||||||||  || | ||||| |||||| ||||||||||||||||||||||||||||||||    
T  15866041 agggcaactcagtgcactatagatcccgcaaacgcagggtccgggaaggggtcccaccatttggtgtatt 15866110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 218 - 328
Target Start/End: Original strand, 7947371 - 7947483
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca-tttggtgtattgtacgcaatgtta-ccttgtatttaca 315  Q
    |||||||| || |||||||| ||||| || ||||||||  ||||||||||||| ||||||| ||||||||||||||||||   ||| ||| || ||||||    
T  7947371 aaagggcagccaagtgcactaaagctcccacatacgcaaggtccgggaagggggcccaccattttggtgtattgtacgcagccttaccctggtttttaca 7947470  T
Q  316 caagaggttgttt 328  Q
    || ||||||||||    
T  7947471 caggaggttgttt 7947483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 212 - 284
Target Start/End: Complemental strand, 24097718 - 24097646
Alignment:
Q  212 tttataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggt 284  Q
    |||| ||||||||||||  |  |||| ||||| |||||||||||| |||||||||||||||||||||||||||    
T  24097718 tttaaaaaagggcaacctgggacactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttggt 24097646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 33138955 - 33138891
Alignment:
Q  231 gtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgc 295  Q
    ||||||| ||||||| |||||| ||| |||||| || ||||||||||||||||||||||||||||    
T  33138955 gtgcactaaagctactgcatacacagggtccggaaaagggtcccaccatttggtgtattgtacgc 33138891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 218 - 308
Target Start/End: Original strand, 13628256 - 13628346
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgt 308  Q
    ||||||||| |||||||||| || || |||||||||||| |||  ||||||||||   | |||| |||||||||||||||| |||||||||    
T  13628256 aaagggcaatccagtgcactaaaactcccgcatacgcagagtctaggaaggggtcttgctatttagtgtattgtacgcaattttaccttgt 13628346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 32579539 - 32579482
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||| ||||||| |||| ||| |||||||||||||||||||||| ||||||||||||    
T  32579539 aagctcccgcatatgcagggtctgggaaggggtcccaccatttggggtattgtacgca 32579482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 328
Target Start/End: Original strand, 18277192 - 18277304
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttaca 315  Q
    |||||| |||||| ||||| | ||||| ||||||||| || |||  ||||||||||||||||||||||||  ||||| |||  ||||| || | ||||||    
T  18277192 aaaaggacaacccggtgcagtaaagctcccgcatacgtagagtctaggaaggggtcccaccatttggtgttctgtactcaaccttaccctgatttttaca 18277291  T
Q  316 caagaggttgttt 328  Q
    ||||||| |||||    
T  18277292 caagaggctgttt 18277304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 3116128 - 3116209
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca--tttggtgtattgtacgca 296  Q
    |||||||||| || ||| ||| ||||| |||||||||||  ||||| |||||||||||||||  ||||||||||||| ||||    
T  3116128 aaaagggcaatccggtgtactaaagctcccgcatacgcaaggtccgagaaggggtcccaccatttttggtgtattgtgcgca 3116209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 218 - 286
Target Start/End: Original strand, 10734905 - 10734974
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca-tttggtgt 286  Q
    |||||||| ||| ||| ||| ||||| |||||||||||| ||||||||||||| ||||||| ||||||||    
T  10734905 aaagggcagcccggtggactaaagctcccgcatacgcagggtccgggaagggggcccaccactttggtgt 10734974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 15865859 - 15865928
Alignment:
Q  220 agggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtatt 289  Q
    |||||||| |||||||||  || |  |||| |||||| |||| |||||||||||||||||||||||||||    
T  15865859 agggcaactcagtgcactatagatcacgcaaacgcagggtccaggaaggggtcccaccatttggtgtatt 15865928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 22967298 - 22967237
Alignment:
Q  231 gtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgta 292  Q
    ||||| |||| || ||||||| |||| ||||  |||||||||||||||||||||||||||||    
T  22967298 gtgcaatgaaactcccgcataggcagggtccaagaaggggtcccaccatttggtgtattgta 22967237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 23821095 - 23821156
Alignment:
Q  231 gtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgta 292  Q
    ||||| |||| || ||||||| |||| ||||  |||||||||||||||||||||||||||||    
T  23821095 gtgcaatgaaactcccgcataggcagggtccaagaaggggtcccaccatttggtgtattgta 23821156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 328
Target Start/End: Complemental strand, 1941991 - 1941879
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttg-tatttaca 315  Q
    ||||||||||| | ||||||  || || |||||||| ||   ||| ||| |||||||||||||| |||||||||||||||   ||||| || | ||||||    
T  1941991 aaaagggcaacacggtgcacaaaaactcccgcatacacaagatccaggatggggtcccaccattcggtgtattgtacgcagccttaccctgttttttaca 1941892  T
Q  316 caagaggttgttt 328  Q
    |||||||||||||    
T  1941891 caagaggttgttt 1941879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 296
Target Start/End: Complemental strand, 28007765 - 28007683
Alignment:
Q  213 ttataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    ||||||||||| || || |||||||  |||| ||||||| | || ||  |||||||||||||| ||||||||||||||||||||    
T  28007765 ttataaaagggtaatccggtgcactagagcttccgcatatggag-gttagggaaggggtcccagcatttggtgtattgtacgca 28007683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 328
Target Start/End: Complemental strand, 11849159 - 11849077
Alignment:
Q  248 catacgcagtgtccgggaaggggtcccacca-tttggtgtattgtacgcaatgttaccttgtattt-acacaagaggttgttt 328  Q
    ||||||||| || |||||||||||||||||| |||||||||||||  ||||  ||| | ||| ||| ||||||||||||||||    
T  11849159 catacgcagagttcgggaaggggtcccaccattttggtgtattgtgggcaactttatcctgtttttaacacaagaggttgttt 11849077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 286
Target Start/End: Complemental strand, 11395875 - 11395827
Alignment:
Q  239 aagctaccgcatacgcagtgtccgggaaggggtcccacca-tttggtgt 286  Q
    ||||| ||||||||||||  |||||||||||||||||||| ||||||||    
T  11395875 aagctcccgcatacgcaggatccgggaaggggtcccaccactttggtgt 11395827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 291
Target Start/End: Complemental strand, 19340949 - 19340889
Alignment:
Q  232 tgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca-tttggtgtattgt 291  Q
    |||||| ||||| |||||||||| | |||| ||||||||||||| || |||||||||||||    
T  19340949 tgcactaaagcttccgcatacgccgggtccaggaaggggtcccatcattttggtgtattgt 19340889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 217 - 342
Target Start/End: Original strand, 13023 - 13148
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    ||||||||||||| ||||||| ||||  |||||||||||| ||| ||||||||||||||||||| |||||||||||||||   ||||||||| ||||| |    
T  13023 aaaagggcaacccggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccaccattcggtgtattgtacgcagccttaccttgtttttacgc 13122  T
Q  317 aagaggttgttttcagaacttaaacc 342  Q
    |||||| ||||| ||| |||| ||||    
T  13123 aagaggctgtttccaggacttgaacc 13148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 216 - 345
Target Start/End: Original strand, 48632 - 48760
Alignment:
Q  216 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttaca 315  Q
    |||||||||||||| |||||||  |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||   ||||| ||| ||||||    
T  48632 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-tttaca 48730  T
Q  316 caagaggttgttttcagaacttaaacccat 345  Q
    ||||||| ||||| ||  |||| |||||||    
T  48731 caagaggctgtttccaccacttgaacccat 48760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 222 - 368
Target Start/End: Original strand, 1591 - 1736
Alignment:
Q  222 ggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaagag 321  Q
    |||||||  ||||||| ||||| |||||||||| | |||||||||||||||||| |||||||||||||||| |||   ||| | ||| ||||||||||||    
T  1591 ggcaacctggtgcactaaagctcccgcatacgccgggtccgggaaggggtcccatcatttggtgtattgtatgcagccttatcctgt-tttacacaagag 1689  T
Q  322 gttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    ||||||||||| |||| |||||||| | ||||| |||| | ||||||    
T  1690 gttgttttcaggacttgaacccatgacctttcagtcacatgacaaca 1736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 217 - 342
Target Start/End: Complemental strand, 30713 - 30589
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacac 316  Q
    ||||||||||||| |||||||  |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||    |||| ||| |||||||    
T  30713 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccctaccctgt-tttacac 30615  T
Q  317 aagaggttgttttcagaacttaaacc 342  Q
    |||||| ||||| ||| |||| ||||    
T  30614 aagaggctgtttccaggacttgaacc 30589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 220 - 368
Target Start/End: Original strand, 10052 - 10199
Alignment:
Q  220 agggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaag 319  Q
    |||||||||| |||||||| |||| | ||||| |||| ||||||||||||||||||| ||||||||||||||||||| | ||||  ||| ||||||||||    
T  10052 agggcaacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactctgt-tttacacaag 10150  T
Q  320 aggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    ||| ||||| ||| |||| ||||| || | ||||| |||| | ||||||    
T  10151 aggctgtttccaggacttgaacccgtgacctttcagtcacatgacaaca 10199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 220 - 368
Target Start/End: Original strand, 20380 - 20527
Alignment:
Q  220 agggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacacaag 319  Q
    |||||||||| |||||||| |||| | ||||| |||| ||||||||||||||||||| ||||||||||||||||||| | ||||  ||| ||||||||||    
T  20380 agggcaacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactctgt-tttacacaag 20478  T
Q  320 aggttgttttcagaacttaaacccatggcttttcaatcacgtaacaaca 368  Q
    ||| ||||| ||| |||| ||||| || | ||||| |||| | ||||||    
T  20479 aggctgtttccaggacttgaacccgtgacctttcagtcacatgacaaca 20527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 24132 - 24211
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    |||||||||| || |||||||  |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  24132 aaaagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgca 24211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 343
Target Start/End: Complemental strand, 11264 - 11140
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgtatttacaca 317  Q
    |||||||||||  |||||||  |||| ||||||| |||| ||||||||||| ||||||||||||||||||||||| |||   |||| |||| ||||||||    
T  11264 aaagggcaacctggtgcactagagctcccgcatatgcagggtccgggaaggtgtcccaccatttggtgtattgtaagcagccttactttgt-tttacaca 11166  T
Q  318 agaggttgttttcagaacttaaaccc 343  Q
    ||||| ||||| ||| |||| |||||    
T  11165 agaggctgtttccaggacttgaaccc 11140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 343
Target Start/End: Complemental strand, 59114 - 58986
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca--tttggtgtattgtacgcaatgttaccttg-tatttac 314  Q
    ||||||||||||  |||||| ||||| |||||||||||| ||| |||||||||||||||||  |||||||||||||||||| | ||||| || | ||||     
T  59114 aaagggcaacccgatgcactaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttat 59015  T
Q  315 acaagaggttgttttcagaacttaaaccc 343  Q
    |||||||| ||||| ||| |||| |||||    
T  59014 acaagaggctgtttccaggacttgaaccc 58986  T

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Target: scaffold0018 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 292
Target Start/End: Original strand, 72867 - 72941
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgta 292  Q
    |||||||||||  ||||||| ||||| ||||||||||||  ||||||||||||| | ||||||||||||||||||    
T  72867 aaagggcaacctggtgcactaaagctcccgcatacgcaggttccgggaaggggtactaccatttggtgtattgta 72941  T

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Target: scaffold0954 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 322
Target Start/End: Complemental strand, 3679 - 3574
Alignment:
Q  218 aaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcaatgttaccttgta-tttacac 316  Q
    |||||| ||| | ||||||| ||||| |||||||||||| || ||||||||||||||| |||| |||||||| ||||||   ||||||| || |||||||    
T  3679 aaagggaaactcggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagccttaccttatattttacac 3580  T
Q  317 aagagg 322  Q
    ||||||    
T  3579 aagagg 3574  T

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Target: scaffold0254 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 4255 - 4141
Alignment:
Q  258 gtccgggaaggggtcccaccattt---ggtgtattgtacgcaatgttaccttgtattt-acacaagaggttgttttcagaacttaaacccatggcttttc 353  Q
    ||||||||||||||||||||| ||   ||||||||||||||||  ||| | ||||||| |||||||||||||||| ||| |||| ||||| || | ||||    
T  4255 gtccgggaaggggtcccaccaattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacctttc 4156  T
Q  354 aatcacgtaacaaca 368  Q
    | |||| ||||||||    
T  4155 agtcacataacaaca 4141  T

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Target: scaffold0194 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 24784 - 24705
Alignment:
Q  217 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgca 296  Q
    |||||||||| |  ||||||||||||| ||| |||||||| ||| || ||||||  |||| |||||||||||| ||||||    
T  24784 aaaagggcaatcaggtgcactgaagctcccgtatacgcagggtctggaaagggggtccactatttggtgtattatacgca 24705  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 296
Target Start/End: Original strand, 35062 - 35095
Alignment:
Q  263 ggaaggggtcccaccatttggtgtattgtacgca 296  Q
    |||| |||||||||||||||||||||||||||||    
T  35062 ggaaagggtcccaccatttggtgtattgtacgca 35095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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