View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1701-Insertion-17 (Length: 683)
Name: NF1701-Insertion-17
Description: NF1701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1701-Insertion-17 |
 | |
|
| [»] chr3 (2 HSPs) |
| |
|
| [»] chr4 (4 HSPs) |
| |
|
| [»] chr2 (1 HSPs) |
| |
|
| [»] chr1 (1 HSPs) |
| |
|
| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 536; Significance: 0; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 536; E-Value: 0
Query Start/End: Original strand, 144 - 683
Target Start/End: Original strand, 53145803 - 53146342
Alignment:
| Q |
144 |
ttatggctgtagtagatacacggatagcagcaaagttgtacagtaaacatagttaccaatagggcattaccccaagagtttgatccagctactgctccac |
243 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53145803 |
ttatggctgtagtagatacacggatagcagcaaagttgtatagtaaacatagttaccaatagggcattaccccaagagtttgatccagctactgctccac |
53145902 |
T |
|
| Q |
244 |
aaaatgttcctcaccttcttcttcttcataatcatcttcctcctcagctattgcatcctggtattgttggtactctgctaccaaatcgttcatgttactt |
343 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53145903 |
aaaatgttcctcaccttcttcttcttcataatcatcttcctcctcagctattgcatcctggtattgttggtactctgctaccaaatcgttcatgttactt |
53146002 |
T |
|
| Q |
344 |
tctgcctccgtgaactccatctcatccattccctccccagtataccaatgcaaaaaggccttgcgccggaacattgcagtaaactgctcactgaccctcc |
443 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53146003 |
tctgcctccgtgaactccatctcatccattccctccccagtataccaatgcaaaaaggccttgcgccggaacattgcagtaaactgctcactgaccctcc |
53146102 |
T |
|
| Q |
444 |
tgaacatctcctgaattgaagtagagttcccaataaaagtggacgacatcttcaaattcttgggtgggatatcacacacactagacttcacattgttggg |
543 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53146103 |
tgaacatctcctgaattgaagtagagttcccaataaaagtggacgacatcttcaaattcttgggtgggatatcacacacactagacttcacattgttggg |
53146202 |
T |
|
| Q |
544 |
aatccattcaacaaagtatgaagaattcttgttctgcacattgatgatttgttcatcaacctctttggtgctcatctttcctctgaacattgcagatgca |
643 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53146203 |
aatccattcaacaaagtatgaagaattcttgttctgcacattgatgatttgttcatcaacctctttggtgctcatctttcctctgaacattgcagatgca |
53146302 |
T |
|
| Q |
644 |
gttaagtatcgaccatgtcgagggtcagcagcacacatca |
683 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53146303 |
gttaagtatcgaccatgtcgagggtcagcagcacacatca |
53146342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 53145668 - 53145746
Alignment:
| Q |
8 |
aatagaagtatagaataaccctgtctgacaggacgcattcagattttcaaacagttcagaaatactagtattacacttc |
86 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53145668 |
aatagaagtatagaataaccctgtctgacaggacgcattcagattttcaaacagttcagaaatactagtattacacttc |
53145746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 130; Significance: 5e-67; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 278 - 683
Target Start/End: Original strand, 38176925 - 38177330
Alignment:
| Q |
278 |
tcttcctcctcagctattgcatcctggtattgttggtactctgctaccaaatcgttcatgttactttctgcctccgtgaactccatctcatccattccct |
377 |
Q |
| |
|
|||||||| ||||| | |||||||||||||| ||||||||||| |||||||| ||||||||||| || ||||| ||||||||||| ||||||||||||| |
|
|
| T |
38176925 |
tcttcctcatcagcagtagcatcctggtattgctggtactctgccaccaaatcattcatgttactctcggcctcagtgaactccatttcatccattccct |
38177024 |
T |
|
| Q |
378 |
ccccagtataccaatgcaaaaaggccttgcgccggaacattgcagtaaactgctcactgaccctcctgaacatctcctgaattgaagtagagttcccaat |
477 |
Q |
| |
|
| ||||| ||||||||||| || |||||||||| ||||| || || |||||||| ||||| |||||||||||||| ||||| || || || || ||||| |
|
|
| T |
38177025 |
caccagtgtaccaatgcaagaaagccttgcgcctaaacatagctgtgaactgctcgctgactctcctgaacatctcttgaatagatgttgaattgccaat |
38177124 |
T |
|
| Q |
478 |
aaaagtggacgacatcttcaaattcttgggtgggatatcacacacactagacttcacattgttgggaatccattcaacaaagtatgaagaattcttgttc |
577 |
Q |
| |
|
|||||||| | || ||| | | | | ||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| ||||| || |||||| |
|
|
| T |
38177125 |
gaaagtggatgccaacttaagacccgttggtggtatatcacacacgctagacttgacgttgttgggtatccactcaacaaagtaagaagagtttttgttc |
38177224 |
T |
|
| Q |
578 |
tgcacattgatgatttgttcatcaacctctttggtgctcatctttcctctgaacattgcagatgcagttaagtatcgaccatgtcgagggtcagcagcac |
677 |
Q |
| |
|
|| ||||| || || || || || ||||| |||||||||||||| || | ||||||||| || ||||| || || ||||| || || || || ||||| | |
|
|
| T |
38177225 |
tgtacattaatcatctgctcgtccacctccttggtgctcatcttaccacggaacattgctgaagcagtcaaataacgaccgtggcgtggatctgcagcgc |
38177324 |
T |
|
| Q |
678 |
acatca |
683 |
Q |
| |
|
|||||| |
|
|
| T |
38177325 |
acatca |
38177330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 257 - 683
Target Start/End: Complemental strand, 5532910 - 5532487
Alignment:
| Q |
257 |
ccttcttcttcttcataatcatcttcctcctcagctattgcatcctggtattgttggtactctgctaccaaatcgttcatgttactttctgcctccgtga |
356 |
Q |
| |
|
|||||||||||| |||| ||||| ||| ||||| | ||||| ||||| ||||| ||||| || |||| ||| |||||||| || || ||||| |||| |
|
|
| T |
5532910 |
ccttcttcttctccatactcatc---ctcatcagcggtggcatcttggtactgttgatactcagcaaccagatcattcatgttgctctcagcctcagtga |
5532814 |
T |
|
| Q |
357 |
actccatctcatccattccctccccagtataccaatgcaaaaaggccttgcgccggaacattgcagtaaactgctcactgaccctcctgaacatctcctg |
456 |
Q |
| |
|
| ||||| || ||||| || || ||||| ||||||||||| || ||||| | || |||||| ||||| ||||||||||| ||||| | |||||| ||||| |
|
|
| T |
5532813 |
attccatttcgtccatgccttcaccagtgtaccaatgcaagaaagcctttctcctgaacatagcagtgaactgctcactcaccctacggaacatttcctg |
5532714 |
T |
|
| Q |
457 |
aattgaagtagagttcccaataaaagtggacgacatcttcaaat-tcttgggtgggatatcacacacactagacttcacattgttgggaatccattcaac |
555 |
Q |
| |
|
||| || || ||||| ||||| || || || | ||| ||||| | ||||| || |||||||| ||| |||||||||||||||| |||||||||||||| |
|
|
| T |
5532713 |
aatggatgtggagtttccaatgaatgttgaagccattttcaaccctgttggg-ggaatatcacagacagtagacttcacattgtttggaatccattcaac |
5532615 |
T |
|
| Q |
556 |
aaagtatgaagaattcttgttctgcacattgatgatttgttcatcaacctctttggtgctcatctttcctctgaacattgcagatgcagttaagtatcga |
655 |
Q |
| |
|
|||||| || || ||||||||||| ||||| || ||||||||||||||||| |||||||||||||| ||||| ||||| || || ||||| | |||||| |
|
|
| T |
5532614 |
aaagtaggatgagttcttgttctggacattcatcatttgttcatcaacctccttggtgctcatcttgcctctaaacatggctgaagcagtgaggtatcgc |
5532515 |
T |
|
| Q |
656 |
ccatgtcgagggtcagcagcacacatca |
683 |
Q |
| |
|
||||| | |||||||||||||||||||| |
|
|
| T |
5532514 |
ccatgcctagggtcagcagcacacatca |
5532487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 332 - 683
Target Start/End: Original strand, 5934655 - 5935006
Alignment:
| Q |
332 |
ttcatgttactttctgcctccgtgaactccatctcatccattccctccccagtataccaatgcaaaaaggccttgcgccggaacattgcagtaaactgct |
431 |
Q |
| |
|
|||||||| || || ||||| ||||||||||||||||||||||| || || || ||||||||||| || ||||| | || |||||| ||||||||||||| |
|
|
| T |
5934655 |
ttcatgttgctctcagcctcagtgaactccatctcatccattccttcacctgtgtaccaatgcaagaaagcctttctcctgaacatagcagtaaactgct |
5934754 |
T |
|
| Q |
432 |
cactgaccctcctgaacatctcctgaattgaagtagagttcccaataaaagtggacgacatcttcaaattcttgggtgggatatcacacacactagactt |
531 |
Q |
| |
|
|||| ||||| | |||||| || ||||||||||| ||||| || || || || || | ||||||||| | ||||| |||||||| ||| | || || |
|
|
| T |
5934755 |
cactcacccttcggaacatttcttgaattgaagttgagtttccgatgaatgtagaagccatcttcaaccctgttggtggaatatcacaaacagttgattt |
5934854 |
T |
|
| Q |
532 |
cacattgttgggaatccattcaacaaagtatgaagaattcttgttctgcacattgatgatttgttcatcaacctctttggtgctcatctttcctctgaac |
631 |
Q |
| |
|
|||||||| |||||||||||||| ||||| || || ||||||||||| |||||||| |||||||||||||| || || ||||||||||| |||||||| |
|
|
| T |
5934855 |
gacattgtttggaatccattcaacgaagtaggatgagttcttgttctgaacattgatcatttgttcatcaacttcctttgtgctcatcttgcctctgaag |
5934954 |
T |
|
| Q |
632 |
attgcagatgcagttaagtatcgaccatgtcgagggtcagcagcacacatca |
683 |
Q |
| |
|
|| || |||||||| | ||| || || |||| |||||||||||||||||||| |
|
|
| T |
5934955 |
atggctgatgcagtgaggtaccgtccgtgtctagggtcagcagcacacatca |
5935006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 332 - 683
Target Start/End: Original strand, 5921195 - 5921546
Alignment:
| Q |
332 |
ttcatgttactttctgcctccgtgaactccatctcatccattccctccccagtataccaatgcaaaaaggccttgcgccggaacattgcagtaaactgct |
431 |
Q |
| |
|
|||||||| || || ||||| ||||||||||||||||||||||| || || || ||||||||||| || ||||| | || |||||| ||||||||||||| |
|
|
| T |
5921195 |
ttcatgttgctctcagcctcagtgaactccatctcatccattccttcacctgtgtaccaatgcaagaaagcctttctcctgaacatagcagtaaactgct |
5921294 |
T |
|
| Q |
432 |
cactgaccctcctgaacatctcctgaattgaagtagagttcccaataaaagtggacgacatcttcaaattcttgggtgggatatcacacacactagactt |
531 |
Q |
| |
|
|||| ||||| | |||||| || ||||||||||| ||||| || || || || || | ||||||||| | ||||| |||||||| ||| | || || |
|
|
| T |
5921295 |
cactcacccttcggaacatttcttgaattgaagttgagtttccgatgaatgtagaagccatcttcaaccctgttggtggaatatcacaaacagttgattt |
5921394 |
T |
|
| Q |
532 |
cacattgttgggaatccattcaacaaagtatgaagaattcttgttctgcacattgatgatttgttcatcaacctctttggtgctcatctttcctctgaac |
631 |
Q |
| |
|
|||||||| ||||||||||| || ||||| || || ||||||||||| |||||||| |||||||||||||| ||||| |||||||| || |||||||| |
|
|
| T |
5921395 |
gacattgtttggaatccattcgacgaagtaggatgagttcttgttctgaacattgatcatttgttcatcaacttctttagtgctcattttgcctctgaag |
5921494 |
T |
|
| Q |
632 |
attgcagatgcagttaagtatcgaccatgtcgagggtcagcagcacacatca |
683 |
Q |
| |
|
|| || |||||||| | |||||| || |||| |||||| ||||||||||||| |
|
|
| T |
5921495 |
atggctgatgcagtgaggtatcgtccgtgtctagggtcggcagcacacatca |
5921546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 123; Significance: 8e-63; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 277 - 683
Target Start/End: Original strand, 11731780 - 11732186
Alignment:
| Q |
277 |
atcttcctcctcagctattgcatcctggtattgttggtactctgctaccaaatcgttcatgttactttctgcctccgtgaactccatctcatccattccc |
376 |
Q |
| |
|
|||||| || ||||| |||||||||||||||| |||||||| || || | ||| ||||||||||| || ||||| ||||||||||| || ||||||||| |
|
|
| T |
11731780 |
atcttcttcgtcagcagttgcatcctggtattgctggtactcagcaacaagatcattcatgttactctcagcctcagtgaactccatttcgtccattccc |
11731879 |
T |
|
| Q |
377 |
tccccagtataccaatgcaaaaaggccttgcgccggaacattgcagtaaactgctcactgaccctcctgaacatctcctgaattgaagtagagttcccaa |
476 |
Q |
| |
|
|| ||||| ||||||||||| || |||||||||| ||||| || || ||||||||||| || ||||||||||||||||| || ||||| || || || | |
|
|
| T |
11731880 |
tcaccagtgtaccaatgcaagaaagccttgcgcctaaacatagctgtgaactgctcactaactctcctgaacatctcctggatcgaagttgaattaccga |
11731979 |
T |
|
| Q |
477 |
taaaagtggacgacatcttcaaattcttgggtgggatatcacacacactagacttcacattgttgggaatccattcaacaaagtatgaagaattcttgtt |
576 |
Q |
| |
|
| ||||| || | |||||| | ||| |||||||||||||| || || ||||| ||||| || || ||||| ||||||||||||||||| |||||||| |
|
|
| T |
11731980 |
tgaaagttgatgccatcttaaggccctttggtgggatatcacatacgctggacttaacattatttggtatccactcaacaaagtatgaagagttcttgtt |
11732079 |
T |
|
| Q |
577 |
ctgcacattgatgatttgttcatcaacctctttggtgctcatctttcctctgaacattgcagatgcagttaagtatcgaccatgtcgagggtcagcagca |
676 |
Q |
| |
|
||||||||||| || || ||||| || || || ||||||||||| || | ||||||||| ||||| || || || || ||||| || || ||||||||| |
|
|
| T |
11732080 |
ttgcacattgatcatctgctcatctacttcctttgtgctcatcttaccacggaacattgctgatgcggtcaaataacggccatggcgtggatcagcagca |
11732179 |
T |
|
| Q |
677 |
cacatca |
683 |
Q |
| |
|
||||||| |
|
|
| T |
11732180 |
cacatca |
11732186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 116; Significance: 1e-58; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 296 - 683
Target Start/End: Original strand, 45452361 - 45452748
Alignment:
| Q |
296 |
gcatcctggtattgttggtactctgctaccaaatcgttcatgttactttctgcctccgtgaactccatctcatccattccctccccagtataccaatgca |
395 |
Q |
| |
|
||||| |||||||| |||||||||| || | || |||||||| |||||||| || || ||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
45452361 |
gcatcttggtattgctggtactctgagacaaggtcattcatgttgctttctgcttcagtaaactccatctcatccataccctctccagtataccaatgca |
45452460 |
T |
|
| Q |
396 |
aaaaggccttgcgccggaacattgcagtaaactgctcactgaccctcctgaacatctcctgaattgaagtagagttcccaataaaagtggacgacatctt |
495 |
Q |
| |
|
| || || || | |||||||| || || || |||||||| |||||||| ||||| || ||||| || || ||||| ||||||||||| || | ||| || |
|
|
| T |
45452461 |
agaaagcttttctgcggaacatagccgtgaattgctcactcaccctcctaaacatttcttgaatagatgtggagttaccaataaaagtagaagccatttt |
45452560 |
T |
|
| Q |
496 |
caaattcttgggtgggatatcacacacactagacttcacattgttgggaatccattcaacaaagtatgaagaattcttgttctgcacattgatgatttgt |
595 |
Q |
| |
|
| | | || ||||||||||| ||| | || |||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||| || || |
|
|
| T |
45452561 |
aagaccagttggagggatatcacagacagtggatttcacattgttgggaatccactcaacaaagtatgatgaattcttgttctgaacattgatcatctgc |
45452660 |
T |
|
| Q |
596 |
tcatcaacctctttggtgctcatctttcctctgaacattgcagatgcagttaagtatcgaccatgtcgagggtcagcagcacacatca |
683 |
Q |
| |
|
||||||||||| |||||||||||||| || | |||||| |||||||| || || || ||||| || ||||| ||||| || ||||||| |
|
|
| T |
45452661 |
tcatcaacctccttggtgctcatcttaccacggaacatggcagatgctgtcaaataacgaccgtggcgaggatcagcggcgcacatca |
45452748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 332 - 683
Target Start/End: Complemental strand, 34841907 - 34841556
Alignment:
| Q |
332 |
ttcatgttactttctgcctccgtgaactccatctcatccattccctccccagtataccaatgcaaaaaggccttgcgccggaacattgcagtaaactgct |
431 |
Q |
| |
|
|||||||| || ||||| || ||||| ||||| |||||||| || || ||||| ||||||||||| || ||||| | || ||||| || ||||| |||| |
|
|
| T |
34841907 |
ttcatgttgctctctgcttctgtgaattccatttcatccatgccttcaccagtgtaccaatgcaagaaagccttcctcctaaacatagcggtaaattgct |
34841808 |
T |
|
| Q |
432 |
cactgaccctcctgaacatctcctgaattgaagtagagttcccaataaaagtggacgacatcttcaaattcttgggtgggatatcacacacactagactt |
531 |
Q |
| |
|
| || |||||||| ||||| ||||||||||| || ||||| || ||||| ||||| | ||| | | | || | || ||||| ||||| ||||| |
|
|
| T |
34841807 |
cgctcaccctcctaaacatttcctgaattgaggttgagttaccgataaaggtggaggccatggagagacctctaggagcaatgtcacaaacacttgactt |
34841708 |
T |
|
| Q |
532 |
cacattgttgggaatccattcaacaaagtatgaagaattcttgttctgcacattgatgatttgttcatcaacctctttggtgctcatctttcctctgaac |
631 |
Q |
| |
|
||||||||||| ||||| ||||||||||| ||||| ||||||||||| ||||| || ||||| ||||| |||||||||||||||||||| || |||||| |
|
|
| T |
34841707 |
aacattgttggggatccactcaacaaagtaggaagagttcttgttctggacatttatcatttgctcatccacctctttggtgctcatcttacccctgaac |
34841608 |
T |
|
| Q |
632 |
attgcagatgcagttaagtatcgaccatgtcgagggtcagcagcacacatca |
683 |
Q |
| |
|
|| ||||| ||||| | |||||||||||| | ||| |||||||||||||||| |
|
|
| T |
34841607 |
atggcagacgcagtgaggtatcgaccatgcctaggatcagcagcacacatca |
34841556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 66; Significance: 8e-29; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 296 - 632
Target Start/End: Complemental strand, 45320650 - 45320314
Alignment:
| Q |
296 |
gcatcctggtattgttggtactctgctaccaaatcgttcatgttactttctgcctccgtgaactccatctcatccattccctccccagtataccaatgca |
395 |
Q |
| |
|
||||||||||||||||| || || || || | ||| ||||| || |||||||| || || || ||||| ||||||||||| || || ||||||||||||| |
|
|
| T |
45320650 |
gcatcctggtattgttgatattcagcaacaagatcattcatattgctttctgcttcagtaaattccatttcatccattccttctccggtataccaatgca |
45320551 |
T |
|
| Q |
396 |
aaaaggccttgcgccggaacattgcagtaaactgctcactgaccctcctgaacatctcctgaattgaagtagagttcccaataaaagtggacgacatctt |
495 |
Q |
| |
|
| || || || | | |||||| |||| ||||| ||||| || ||||| ||||||||||| || || || || || |||| ||| || || | |||| |
|
|
| T |
45320550 |
agaatgctttccttctgaacatggcagagaactgttcactcactctcctaaacatctcctgtatagatgtcgaattgccaacaaatgtcgaagccatcga |
45320451 |
T |
|
| Q |
496 |
caaattct-tgggtgggatatcacacacactagacttcacattgttgggaatccattcaacaaagtatgaagaattcttgttctgcacattgatgatttg |
594 |
Q |
| |
|
|| || | ||||||| |||||| ||||| ||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| || | || |
|
|
| T |
45320450 |
-aaggcctctaggtgggacatcacagacactggacttcacattattgggaatccattcaacgaagtaagaagaattcttgttctgcacattcattacctg |
45320352 |
T |
|
| Q |
595 |
ttcatcaacctctttggtgctcatctttcctctgaaca |
632 |
Q |
| |
|
|||||| || ||||| |||||||| || ||||| |||| |
|
|
| T |
45320351 |
ttcatccacttcttttgtgctcattttccctctaaaca |
45320314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 323 - 683
Target Start/End: Original strand, 40916254 - 40916614
Alignment:
| Q |
323 |
accaaatcgttcatgttactttctgcctccgtgaactccatctcatccattccctccccagtataccaatgcaaaaaggccttgcgccggaacattgcag |
422 |
Q |
| |
|
|||||||| ||||| ||||| || ||||| || |||||||||||||||||||| || ||||||||||||||||||| ||||| | | ||||| ||| |
|
|
| T |
40916254 |
accaaatcattcatattactctcagcctcagtaaactccatctcatccattccttcagcagtataccaatgcaaaaatgcctttctcttaaacataacag |
40916353 |
T |
|
| Q |
423 |
taaactgctcactgaccctcctgaacatctcctgaattgaagtagagttcccaataaaagtggacgacatcttcaaattcttgggtgggatatcacacac |
522 |
Q |
| |
|
|||||||||| || | || ||||| || ||||| || || || ||||| ||||| || || |||||| ||| | || || |||||||| || |
|
|
| T |
40916354 |
taaactgctccgaaacacgtctaaacatttcttgaatagatgtcgaattccccataaatgtcgaagacatcgacaaccctgttggcggaatatcacaaac |
40916453 |
T |
|
| Q |
523 |
actagacttcacattgttgggaatccattcaacaaagtatgaagaattcttgttctgcacattgatgatttgttcatcaacctctttggtgctcatcttt |
622 |
Q |
| |
|
||| || ||||||||||| ||||||||||| |||||||| || || ||||||||||| ||||| || || |||| |||||| ||||| |||||||| || |
|
|
| T |
40916454 |
acttgatttcacattgtttggaatccattccacaaagtaagacgagttcttgttctgaacatttatcatctgttgatcaacttcttttgtgctcattttg |
40916553 |
T |
|
| Q |
623 |
cctctgaacattgcagatgcagttaagtatcgaccatgtcgagggtcagcagcacacatca |
683 |
Q |
| |
|
|| | ||||||||| || || |||| || | |||||||| || |||||||||||||||| |
|
|
| T |
40916554 |
ccacggaacattgccgaggctgttagatacctaccatgtcttggatcagcagcacacatca |
40916614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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