View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17010_low_3 (Length: 694)

Name: NF17010_low_3
Description: NF17010
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17010_low_3
NF17010_low_3
[»] chr2 (41 HSPs)
chr2 (11-338)||(25383050-25383376)
chr2 (340-679)||(25383823-25384161)
chr2 (48-138)||(41934537-41934627)
chr2 (53-250)||(19513627-19513818)
chr2 (48-250)||(32766442-32766639)
chr2 (53-250)||(9732868-9733059)
chr2 (53-250)||(32497876-32498067)
chr2 (53-250)||(44284590-44284781)
chr2 (53-250)||(7258857-7259049)
chr2 (146-250)||(38623242-38623347)
chr2 (53-250)||(5278772-5278963)
chr2 (53-250)||(18685797-18685988)
chr2 (53-133)||(33366571-33366651)
chr2 (53-250)||(34338771-34338962)
chr2 (63-184)||(7761578-7761692)
chr2 (53-136)||(18793307-18793390)
chr2 (53-136)||(33889204-33889287)
chr2 (48-266)||(6896124-6896336)
chr2 (53-184)||(16104235-16104359)
chr2 (53-250)||(17540675-17540867)
chr2 (53-184)||(37003873-37003997)
chr2 (53-250)||(41366048-41366237)
chr2 (76-250)||(42706343-42706511)
chr2 (53-250)||(2645025-2645215)
chr2 (60-136)||(35473046-35473122)
chr2 (63-134)||(12672522-12672593)
chr2 (53-132)||(42365538-42365617)
chr2 (145-250)||(18278948-18279053)
chr2 (69-260)||(35114762-35114947)
chr2 (63-136)||(2086043-2086116)
chr2 (69-184)||(26418900-26419008)
chr2 (53-136)||(3913506-3913589)
chr2 (53-136)||(30326377-30326460)
chr2 (146-184)||(1247194-1247232)
chr2 (76-198)||(12939290-12939406)
chr2 (79-136)||(26796216-26796272)
chr2 (146-250)||(37308702-37308807)
chr2 (60-136)||(30798535-30798611)
chr2 (214-266)||(31193990-31194041)
chr2 (214-266)||(31212623-31212674)
chr2 (60-136)||(38993117-38993193)
[»] chr4 (64 HSPs)
chr4 (455-680)||(842577-842803)
chr4 (45-266)||(3649592-3649807)
chr4 (363-435)||(842455-842527)
chr4 (48-250)||(22318315-22318511)
chr4 (53-250)||(39078625-39078816)
chr4 (53-250)||(50727844-50728035)
chr4 (53-250)||(50735858-50736049)
chr4 (459-526)||(10452891-10452958)
chr4 (53-250)||(23521844-23522035)
chr4 (53-250)||(29785468-29785659)
chr4 (54-250)||(33176963-33177153)
chr4 (63-266)||(50178407-50178605)
chr4 (48-266)||(26083297-26083510)
chr4 (53-184)||(33552840-33552964)
chr4 (64-250)||(38486188-38486368)
chr4 (53-184)||(43641063-43641187)
chr4 (48-250)||(44324273-44324469)
chr4 (53-250)||(20802462-20802653)
chr4 (53-250)||(36743619-36743810)
chr4 (53-250)||(37865717-37865908)
chr4 (63-250)||(2725064-2725244)
chr4 (53-136)||(14296561-14296644)
chr4 (53-136)||(14314809-14314892)
chr4 (53-136)||(55593849-55593932)
chr4 (54-136)||(31445915-31445996)
chr4 (47-250)||(41711805-41712002)
chr4 (62-136)||(41720816-41720890)
chr4 (54-120)||(43189817-43189883)
chr4 (63-250)||(47642422-47642603)
chr4 (145-266)||(50729457-50729579)
chr4 (63-250)||(52949695-52949875)
chr4 (60-133)||(43739432-43739505)
chr4 (53-184)||(56154585-56154709)
chr4 (69-250)||(20694351-20694526)
chr4 (54-250)||(24210283-24210474)
chr4 (48-136)||(37695580-37695668)
chr4 (69-250)||(38812500-38812675)
chr4 (53-250)||(46680441-46680632)
chr4 (48-185)||(7001813-7001941)
chr4 (63-138)||(9807130-9807205)
chr4 (63-250)||(24002312-24002494)
chr4 (53-136)||(29616134-29616217)
chr4 (54-136)||(45577731-45577811)
chr4 (53-136)||(49152139-49152221)
chr4 (76-184)||(1231298-1231399)
chr4 (48-184)||(55065331-55065460)
chr4 (53-184)||(9512338-9512462)
chr4 (146-250)||(36497267-36497372)
chr4 (63-248)||(44649097-44649274)
chr4 (63-136)||(54542964-54543037)
chr4 (53-250)||(12600850-12601041)
chr4 (78-134)||(40792406-40792462)
chr4 (149-268)||(53200556-53200676)
chr4 (69-136)||(4325771-4325838)
chr4 (146-264)||(29592945-29593064)
chr4 (63-184)||(32181237-32181351)
chr4 (53-132)||(47361452-47361531)
chr4 (221-263)||(32858424-32858466)
chr4 (146-266)||(11056092-11056213)
chr4 (214-271)||(43739557-43739614)
chr4 (62-130)||(9435371-9435439)
chr4 (69-136)||(23327897-23327965)
chr4 (53-136)||(42869937-42870021)
chr4 (71-135)||(56487292-56487356)
[»] chr3 (46 HSPs)
chr3 (48-250)||(3867581-3867777)
chr3 (63-260)||(39052760-39052951)
chr3 (53-250)||(53557727-53557918)
chr3 (63-260)||(49748833-49749024)
chr3 (54-250)||(51296544-51296734)
chr3 (53-250)||(28675752-28675943)
chr3 (53-250)||(44116901-44117092)
chr3 (53-250)||(51259712-51259903)
chr3 (54-198)||(44000224-44000362)
chr3 (63-250)||(31882954-31883135)
chr3 (63-266)||(50386372-50386569)
chr3 (53-250)||(24571243-24571434)
chr3 (53-250)||(34026629-34026820)
chr3 (63-250)||(29584847-29585028)
chr3 (48-250)||(29646022-29646219)
chr3 (63-266)||(33364694-33364891)
chr3 (53-184)||(1344706-1344830)
chr3 (53-250)||(12349103-12349294)
chr3 (69-250)||(25860353-25860528)
chr3 (61-133)||(34351411-34351483)
chr3 (69-250)||(42636335-42636510)
chr3 (48-136)||(54622836-54622924)
chr3 (53-189)||(5442253-5442382)
chr3 (145-266)||(19906809-19906931)
chr3 (63-250)||(20609580-20609761)
chr3 (48-250)||(51925140-51925336)
chr3 (53-136)||(4851496-4851579)
chr3 (89-198)||(14155445-14155547)
chr3 (53-136)||(26282427-26282510)
chr3 (69-136)||(38213332-38213399)
chr3 (63-184)||(47958431-47958545)
chr3 (63-133)||(41694944-41695014)
chr3 (53-184)||(21221359-21221483)
chr3 (48-266)||(21373888-21374099)
chr3 (53-250)||(3864607-3864797)
chr3 (53-133)||(20255007-20255087)
chr3 (54-138)||(28624958-28625041)
chr3 (53-105)||(30258835-30258887)
chr3 (53-136)||(3695332-3695415)
chr3 (71-130)||(25395594-25395653)
chr3 (53-136)||(25927367-25927450)
chr3 (63-136)||(10747189-10747263)
chr3 (53-126)||(6179394-6179467)
chr3 (48-136)||(22484783-22484871)
chr3 (62-134)||(32621840-32621912)
chr3 (54-134)||(42035720-42035800)
[»] chr1 (47 HSPs)
chr1 (48-250)||(6029314-6029510)
chr1 (63-273)||(39281874-39282078)
chr1 (53-250)||(26118228-26118419)
chr1 (53-250)||(42510495-42510686)
chr1 (48-137)||(15540010-15540099)
chr1 (53-250)||(844737-844928)
chr1 (63-266)||(42512767-42512964)
chr1 (63-250)||(45490888-45491069)
chr1 (64-250)||(17327662-17327842)
chr1 (53-250)||(17887917-17888109)
chr1 (48-266)||(31004097-31004309)
chr1 (53-250)||(16386824-16387015)
chr1 (53-250)||(28340316-28340507)
chr1 (53-250)||(35387324-35387515)
chr1 (54-138)||(49303473-49303556)
chr1 (53-250)||(50540314-50540505)
chr1 (53-250)||(51264465-51264656)
chr1 (63-184)||(16476235-16476349)
chr1 (63-184)||(38663112-38663226)
chr1 (53-136)||(50382524-50382607)
chr1 (53-268)||(7183888-7184097)
chr1 (54-136)||(33316389-33316470)
chr1 (54-132)||(52030330-52030408)
chr1 (53-138)||(32467940-32468025)
chr1 (48-136)||(6144107-6144195)
chr1 (53-250)||(6711059-6711250)
chr1 (53-250)||(16451097-16451288)
chr1 (69-250)||(30105693-30105868)
chr1 (69-250)||(41972898-41973072)
chr1 (62-122)||(47092977-47093037)
chr1 (69-250)||(1601159-1601332)
chr1 (48-184)||(16437327-16437456)
chr1 (63-133)||(46154880-46154950)
chr1 (63-250)||(50304631-50304812)
chr1 (53-184)||(12890208-12890332)
chr1 (53-250)||(32270323-32270514)
chr1 (53-198)||(570356-570497)
chr1 (61-124)||(4895371-4895434)
chr1 (70-133)||(16704713-16704776)
chr1 (69-136)||(41967970-41968037)
chr1 (63-136)||(20495012-20495085)
chr1 (146-266)||(45658877-45658998)
chr1 (53-136)||(24339760-24339841)
chr1 (62-102)||(30798846-30798886)
chr1 (62-133)||(31574332-31574404)
chr1 (62-130)||(49799356-49799424)
chr1 (53-133)||(51703287-51703366)
[»] chr7 (40 HSPs)
chr7 (53-250)||(40753120-40753311)
chr7 (53-250)||(47953155-47953346)
chr7 (48-250)||(329430-329626)
chr7 (53-184)||(26371815-26371939)
chr7 (48-250)||(48445481-48445677)
chr7 (53-250)||(11321824-11322015)
chr7 (53-184)||(26994231-26994355)
chr7 (60-249)||(22724471-22724654)
chr7 (53-250)||(10932496-10932687)
chr7 (64-136)||(29992742-29992813)
chr7 (53-250)||(36769508-36769699)
chr7 (48-136)||(48699358-48699446)
chr7 (63-184)||(18386500-18386614)
chr7 (54-250)||(21784837-21785027)
chr7 (63-184)||(26652841-26652955)
chr7 (63-250)||(38301318-38301498)
chr7 (48-133)||(15035303-15035388)
chr7 (53-250)||(18470649-18470838)
chr7 (53-247)||(30849188-30849376)
chr7 (53-184)||(46633662-46633786)
chr7 (48-136)||(9913485-9913573)
chr7 (48-136)||(9927173-9927261)
chr7 (62-138)||(21408345-21408421)
chr7 (63-196)||(34295397-34295524)
chr7 (63-134)||(30599057-30599128)
chr7 (69-136)||(44748676-44748743)
chr7 (53-136)||(47947725-47947808)
chr7 (53-184)||(41211206-41211331)
chr7 (63-250)||(43368176-43368357)
chr7 (54-134)||(29372828-29372908)
chr7 (48-297)||(1363597-1363839)
chr7 (63-184)||(1870109-1870224)
chr7 (62-134)||(21408675-21408746)
chr7 (48-136)||(41665622-41665710)
chr7 (53-136)||(22724079-22724162)
chr7 (63-184)||(29661298-29661412)
chr7 (53-136)||(32873816-32873899)
chr7 (48-134)||(34117412-34117498)
chr7 (48-136)||(37966934-37967022)
chr7 (54-134)||(41903603-41903683)
[»] chr5 (32 HSPs)
chr5 (53-250)||(32528676-32528867)
chr5 (63-250)||(3735328-3735509)
chr5 (67-258)||(17031132-17031317)
chr5 (48-250)||(18470372-18470568)
chr5 (53-250)||(2351641-2351832)
chr5 (53-248)||(39788153-39788343)
chr5 (63-250)||(31880020-31880201)
chr5 (53-184)||(4818151-4818275)
chr5 (61-184)||(39918476-39918592)
chr5 (53-250)||(24181568-24181759)
chr5 (62-250)||(28090464-28090646)
chr5 (63-266)||(4689626-4689823)
chr5 (63-250)||(7770223-7770404)
chr5 (53-184)||(40489298-40489422)
chr5 (54-250)||(553358-553549)
chr5 (81-250)||(11963330-11963493)
chr5 (69-250)||(21739105-21739280)
chr5 (63-184)||(31644417-31644531)
chr5 (76-250)||(7523156-7523324)
chr5 (48-250)||(8560926-8561121)
chr5 (63-136)||(24036201-24036274)
chr5 (54-184)||(7208241-7208364)
chr5 (54-184)||(41790473-41790596)
chr5 (53-268)||(6284224-6284434)
chr5 (63-184)||(41459560-41459674)
chr5 (53-184)||(8136800-8136922)
chr5 (81-134)||(27839127-27839180)
chr5 (63-248)||(34794858-34795037)
chr5 (69-250)||(35701254-35701429)
chr5 (53-184)||(5571655-5571777)
chr5 (53-95)||(35954974-35955016)
chr5 (53-134)||(40182425-40182506)
[»] chr8 (48 HSPs)
chr8 (54-250)||(12753278-12753468)
chr8 (48-136)||(6460219-6460305)
chr8 (53-250)||(3251609-3251800)
chr8 (53-266)||(15001428-15001634)
chr8 (60-261)||(16595092-16595286)
chr8 (53-250)||(25478204-25478395)
chr8 (53-250)||(27103920-27104111)
chr8 (53-250)||(41709738-41709929)
chr8 (63-266)||(30501116-30501313)
chr8 (53-250)||(6386537-6386728)
chr8 (63-248)||(14004999-14005178)
chr8 (53-250)||(34063089-34063280)
chr8 (66-250)||(10467038-10467216)
chr8 (54-250)||(30542975-30543165)
chr8 (48-266)||(29610992-29611204)
chr8 (53-184)||(31513603-31513727)
chr8 (63-136)||(41548589-41548662)
chr8 (48-136)||(10656747-10656835)
chr8 (54-133)||(54133-54211)
chr8 (63-266)||(7591384-7591581)
chr8 (76-250)||(4052464-4052632)
chr8 (53-184)||(45446416-45446540)
chr8 (53-250)||(8673008-8673199)
chr8 (60-266)||(10932704-10932903)
chr8 (53-250)||(29563179-29563370)
chr8 (53-250)||(32019954-32020145)
chr8 (53-136)||(5968925-5969008)
chr8 (53-136)||(10320338-10320421)
chr8 (48-185)||(16485828-16485958)
chr8 (48-134)||(35225618-35225704)
chr8 (63-250)||(37618345-37618526)
chr8 (63-266)||(39642854-39643051)
chr8 (60-133)||(10531246-10531319)
chr8 (63-136)||(13406996-13407069)
chr8 (63-136)||(22999228-22999301)
chr8 (53-184)||(31732025-31732149)
chr8 (53-184)||(32303605-32303729)
chr8 (69-250)||(7394767-7394942)
chr8 (69-136)||(17805667-17805735)
chr8 (64-136)||(34101480-34101552)
chr8 (63-184)||(29672343-29672457)
chr8 (63-134)||(45114026-45114097)
chr8 (79-136)||(14958946-14959002)
chr8 (146-250)||(40389087-40389192)
chr8 (61-136)||(4599631-4599707)
chr8 (61-137)||(5859532-5859608)
chr8 (64-104)||(18297458-18297498)
chr8 (89-133)||(36426311-36426355)
[»] chr6 (36 HSPs)
chr6 (48-263)||(7396090-7396296)
chr6 (53-184)||(10324155-10324279)
chr6 (48-250)||(10959956-10960152)
chr6 (53-251)||(34176791-34176983)
chr6 (53-250)||(24203324-24203514)
chr6 (53-250)||(32132357-32132548)
chr6 (53-250)||(3932784-3932975)
chr6 (63-250)||(10485128-10485309)
chr6 (53-250)||(3259644-3259835)
chr6 (53-250)||(11613768-11613959)
chr6 (54-138)||(29424650-29424734)
chr6 (64-292)||(9613946-9614168)
chr6 (54-198)||(29054319-29054456)
chr6 (63-250)||(15277257-15277438)
chr6 (60-134)||(16542362-16542436)
chr6 (63-250)||(24242635-24242816)
chr6 (63-250)||(32409829-32410010)
chr6 (53-184)||(2614857-2614981)
chr6 (53-250)||(17867796-17867987)
chr6 (53-250)||(17877579-17877770)
chr6 (63-184)||(18057490-18057604)
chr6 (54-129)||(32614030-32614105)
chr6 (146-263)||(18597122-18597240)
chr6 (48-184)||(31870144-31870273)
chr6 (63-136)||(17443233-17443306)
chr6 (48-250)||(32860007-32860203)
chr6 (68-136)||(11382040-11382108)
chr6 (145-250)||(3379756-3379862)
chr6 (88-184)||(4494159-4494248)
chr6 (60-134)||(8844415-8844489)
chr6 (54-136)||(27824735-27824817)
chr6 (69-184)||(34684027-34684136)
chr6 (145-225)||(5650706-5650787)
chr6 (64-250)||(11212229-11212409)
chr6 (54-260)||(15276904-15277104)
chr6 (48-104)||(13412654-13412710)
[»] scaffold0181 (1 HSPs)
scaffold0181 (53-184)||(19101-19225)
[»] scaffold0004 (1 HSPs)
scaffold0004 (53-250)||(372908-373099)
[»] scaffold0014 (1 HSPs)
scaffold0014 (53-184)||(101910-102034)
[»] scaffold0027 (1 HSPs)
scaffold0027 (63-250)||(15143-15324)
[»] scaffold0650 (1 HSPs)
scaffold0650 (48-250)||(1587-1783)
[»] scaffold0280 (1 HSPs)
scaffold0280 (48-250)||(13631-13827)
[»] scaffold0054 (2 HSPs)
scaffold0054 (53-250)||(23538-23727)
scaffold0054 (147-263)||(19955-20072)
[»] scaffold0957 (1 HSPs)
scaffold0957 (69-136)||(2547-2614)
[»] scaffold0169 (2 HSPs)
scaffold0169 (63-184)||(12547-12661)
scaffold0169 (63-184)||(18065-18179)
[»] scaffold0025 (1 HSPs)
scaffold0025 (63-266)||(5367-5565)
[»] scaffold0098 (1 HSPs)
scaffold0098 (63-184)||(51410-51523)
[»] scaffold0062 (1 HSPs)
scaffold0062 (62-133)||(3683-3754)


Alignment Details
Target: chr2 (Bit Score: 276; Significance: 1e-154; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 11 - 338
Target Start/End: Original strand, 25383050 - 25383376
Alignment:
Q  11 cataggtcagaacatcacaacataggacggaacgatcacaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttat 110  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25383050 cataggacagaacatcacagcataggacggaacgatcacaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaagcttat 25383149  T
Q  111 atttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcagtgatttagtgagggacaaaaattctgtttttgtcatatcaattgtctt 210  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25383150 atttgtattttagacatcttgtacgtagacaaatagacaaaaagttgtgcagtgatttagtgagggacaaaaattctgtttttgtcatgtcaattgtctt 25383249  T
Q  211 cggtttgtcctgtccctaaagcagttttataaatcaaacaatatacaactgaagttatcttgtgatctccgttattttttagaaaatttaatacggatgc 310  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| |||||    
T  25383250 cgacttgtcctgtccctaaagcagttttataaatcaaacaatatacaactgaaattatcttgtgatctccgttattttttcgaaaa-ttaatacagatgc 25383348  T
Q  311 atgctattatgattggattaaaattcac 338  Q
    ||||||||||||||||||||||||||||    
T  25383349 atgctattatgattggattaaaattcac 25383376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 340 - 679
Target Start/End: Original strand, 25383823 - 25384161
Alignment:
Q  340 attcttagagaaaaaactctttctagagagaatttcttatgaggaaaccgaattaaaaagtgtgaaatatatttcctacaaagtgaaaataataaaatan 439  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  25383823 attcttagagaaaaaactctttttagagagaatttcttatgaggaaaccgaattaaaaagtgtgaaatatatttcctacaaagggaaaataataaaataa 25383922  T
Q  440 nnnnnnnnnnnnnnngtgattttctgcttgcatgtcaaatacttagcca-taaacccataaattgagttttgctgagttgtaaattggtacatttggggc 538  Q
                   |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25383923 ttttttttcttttt-gtgattttctgcttgcatgtcaaacacttagccaataaacccataaattgagttttgctgagttgtaaattggtacatttggggc 25384021  T
Q  539 tataaagtgcataattttagtgtggtaactttctgagaaagnnnnnnnnntggcttcctctgatgacagagatacagtagtgaagagacttagacatttg 638  Q
    ||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25384022 tataaagtgcataattttagtgtggtaactttctgagaaa-aaaaaaaaatggcttcctctgatgacagagatacagtagtgaagagacttagacatttg 25384120  T
Q  639 ggcagaaaactatccaaaaacctagcttcttcagctgatat 679  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25384121 ggcagaaaactatccaaaaacctagcttcttcagctgatat 25384161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 48 - 138
Target Start/End: Original strand, 41934537 - 41934627
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtag 138  Q
    |||| ||||||||||||||||| ||||  ||||||||| ||||||| |||||||||| ||||| || |||||||||||||||| |||||||    
T  41934537 acaaatttttacggtattgaatgattttatgtcttatatgatttttggtggacaaaatgttattttggtattttagacaacttatacgtag 41934627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 19513818 - 19513627
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| |||||||| |||||| |||| ||||| |||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  19513818 tttttatggtattgagtaattttttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 19513726  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  19513725 agttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcctttgcctcccgtttgtcctgtacctgaaacagttttacaaatcaaaca 19513627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 48 - 250
Target Start/End: Complemental strand, 32766639 - 32766442
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaataga 147  Q
    |||| |||||| || |||||||||||| |||| ||||||||||||| | |||| ||| ||||| || |||||||||||||| |||||||||       ||    
T  32766639 acaaatttttatggcattgaataattttttgttttatacgatttttggaggacgaaatgttattttggtattttagacaacctgtacgtag-------ga 32766547  T
Q  148 c-aaaaagttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatc 245  Q
    | |||||||||||  ||| ||| ||||||||||||||| || ||||||||| | ||  ||| || | ||||||| ||| ||| || |||||||| |||||    
T  32766546 caaaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttgtcctgtcccttgcctccagtttgtcatgtacctgaaacagttttacaaatc 32766447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 9733059 - 9732868
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || |||||||||||| |||| |||||||||||||   |||||||| | ||| ||  ||||||||||||||||||||| |       |||||||    
T  9733059 tttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgctattttgatattttagacaacttgtacgtgg-------gacaaaa 9732967  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||  ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  9732966 agttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 9732868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 32497876 - 32498067
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| ||||| || |||||||||||||||||||||| |       |||||||    
T  32497876 tttttatggcattgagtaattttttgttttatacgatttttgaaggacaaaatgttattttggtattttagacaacttgtacgtgg-------gacaaaa 32497968  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||  ||| ||| |||||| |||||||| |  ||||||||| | ||  ||| |||| ||||||| ||| ||| || |||||||| ||||||||||    
T  32497969 agttgtgatgtggtttggtgaggtacaaaaatatgagtttttgtcctgtcccttgccttcagtttgtcatgtacctgaaacagttttacaaatcaaaca 32498067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 44284590 - 44284781
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| ||  |||||||||||||||||||||        ||||||||    
T  44284590 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttgttattttagacaacttgtacgtg-------agacaaaa 44284682  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||| ||||||||||||||||||| |  ||||||||| | ||  ||| || | ||||||| ||| ||| || |||||||| ||||||||||    
T  44284683 agttgtgctgtggtttagtgagggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaaca 44284781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 7258857 - 7259049
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaag-gttatatttgtattttagacaacttgtacgtagataaatagacaaa 151  Q
    |||||| || ||||| |||||| |||| |||||| ||||||   ||||||||  ||||| || ||||||||||||||||||||||        |||||||    
T  7258857 tttttatggcattgagtaattttttgttttatacaatttttgagggacaaaaatgttattttggtattttagacaacttgtacgtg-------agacaaa 7258949  T
Q  152 aagttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    ||||||||| ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  7258950 aagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 7259049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 250
Target Start/End: Complemental strand, 38623347 - 38623242
Alignment:
Q  146 gacaaaaagttgtgcagtgatttagtgagggacaaaaa-ttctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaat 244  Q
    ||||||||||||||| ||| ||| |||||||||||||| ||| ||||||||| | || |||| ||   ||||||||||||||| || |||||||| ||||    
T  38623347 gacaaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtcttttccattgcctcaagtttgtcctgtccctgaaacagttttacaaat 38623248  T
Q  245 caaaca 250  Q
    ||||||    
T  38623247 caaaca 38623242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 5278963 - 5278772
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  5278963 tttttatggcattgagtaattttttgttttatacgatttttgaaggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 5278871  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    | |||||| ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||| ||| ||| || |||||||| ||||||||||    
T  5278870 aattgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcatgtacctgaaacagttttacaaatcaaaca 5278772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 18685797 - 18685988
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| ||||| |||||||   |||||||| ||||| ||  ||||||||||||||||||||| |       |||||||    
T  18685797 tttttatggcattgagtaattttttgttttataggatttttgagggacaaaatgttattttaatattttagacaacttgtacgtgg-------gacaaaa 18685889  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||| ||| ||||| ||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  18685890 agttgtgctgtggtttggtgagagacaaaaatatgagtttttgtcttgtcctttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 18685988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 53 - 133
Target Start/End: Original strand, 33366571 - 33366651
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgta 133  Q
    |||||| || |||||||||||| |||| |||||||||||||   |||||||| ||||| || |||||||||||||||||||    
T  33366571 tttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaacttgta 33366651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 34338771 - 34338962
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||| ||| |       |||||||    
T  34338771 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtgcgtgg-------gacaaaa 34338863  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||| ||| ||||||| ||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  34338864 agttgtgctgtggtttggtgagggtcaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 34338962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 184
Target Start/End: Complemental strand, 7761692 - 7761578
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    ||||| |||||| |||| |||||||||||||   |||||||| | ||| || ||||||||||||||||||||||        |||||||||||||||| |    
T  7761692 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgt-------gagacaaaaagttgtgctg 7761600  T
Q  163 tgatttagtgagggacaaaaat 184  Q
    || ||| |||||||||||||||    
T  7761599 tggtttggtgagggacaaaaat 7761578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 18793390 - 18793307
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| || ||||| |||||| |||| |||||| |||||| | |||||||| ||||| || ||||||||||||||||||||||    
T  18793390 tttttatgggattgagtaattttttgttttatacaatttttggaggacaaaatgttattttggtattttagacaacttgtacgt 18793307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 33889204 - 33889287
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| |||||||| |||||| |||| ||||| |||||||   |||||||| ||||| || ||||||||||||||||||||||    
T  33889204 tttttatggtattgagtaattttttgttttatatgatttttgagggacaaaatgttattttggtattttagacaacttgtacgt 33889287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 48 - 266
Target Start/End: Original strand, 6896124 - 6896336
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaataga 147  Q
    |||| |||||| ||||||||||||||| |||| ||||| |  |||| | |||| ||| | ||| || || ||||||||||||||||||| |       ||    
T  6896124 acaaatttttatggtattgaataatttcttgttttatatgccttttgggggacgaaatgctattttggtgttttagacaacttgtacgtgg-------ga 6896216  T
Q  148 caaaaagttgtgcagtgatttagtgagggacaaaaatt-ctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatca 246  Q
    ||||||||||||| ||  ||| |||||||||||||||| | |||||| || | ||  ||| || | ||||||  ||||||| || |||||||| ||||||    
T  6896217 caaaaagttgtgctgttgtttggtgagggacaaaaatttcagtttttatcctgtcccttgcctccagtttgttttgtccctgaaacagttttacaaatca 6896316  T
Q  247 aacaatatacaactgaagtt 266  Q
    |||| |  ||||||||||||    
T  6896317 aacactggacaactgaagtt 6896336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 53 - 184
Target Start/End: Original strand, 16104235 - 16104359
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || ||||||||||||| ||||||||        ||||||||    
T  16104235 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaatttgtacgt-------gagacaaaa 16104327  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat 184  Q
    |||||||| ||| ||| |||||||||||||||    
T  16104328 agttgtgctgtggtttggtgagggacaaaaat 16104359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 17540675 - 17540867
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttg-tattttagacaacttgtacgtagataaatagacaaa 151  Q
    |||||| || ||||| |||||| |||| |||||||||||||   ||||||||   ||| |||| ||||||||||||||||||||| |       ||||||    
T  17540675 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatactatttttggtattttagacaacttgtacgtgg-------gacaaa 17540767  T
Q  152 aagttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    ||||||||| ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| | | || |||||||| ||||||||||    
T  17540768 aagttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacttgaaacagttttacaaatcaaaca 17540867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 53 - 184
Target Start/End: Complemental strand, 37003997 - 37003873
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || |||||||||||| || | |||||||||||||   |||||||| ||||| || ||||||||||||| |||||||| |       |||||||    
T  37003997 tttttatggcattgaataattttttattttatacgatttttgagggacaaaatgttattttggtattttagacaatttgtacgtgg-------gacaaaa 37003905  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat 184  Q
    |||||||  ||| ||| |||||||||||||||    
T  37003904 agttgtgttgtggtttggtgagggacaaaaat 37003873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 41366237 - 41366048
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| | |||||||||||||  |||||||||  |||||||||||| | || ||||| || ||||||||||||||||||| ||        ||||||||    
T  41366237 tttttatgatattgaataattt--tgtcttatataattttttgtggatacaatgttattttggtattttagacaacttgtatgt-------gagacaaaa 41366147  T
Q  153 agttgtgcagtgatttagtgagggacaaaaa-ttctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    | |||||  ||| ||| |||||||||||||| ||| ||||||||| ||||  ||| || | ||||||| ||||||| || | |||| | ||||||||||    
T  41366146 aattgtgttgtggtttggtgagggacaaaaatttcagtttttgtcctatctcttgcctccagtttgtcatgtccctgaaactgtttcacaaatcaaaca 41366048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 76 - 250
Target Start/End: Original strand, 42706343 - 42706511
Alignment:
Q  76 ttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcagtgatttagtgagg 175  Q
    |||| |||||||||||||   |||||||| | ||| || ||||||||||||||||||| || |       ||||||||||||||  ||| ||| ||||||    
T  42706343 ttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtatgtgg-------gacaaaaagttgtgttgtggtttggtgagg 42706435  T
Q  176 gacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    ||||||||| |  ||||||||| ||||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  42706436 gacaaaaatatgagtttttgtcttatcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 42706511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 2645215 - 2645025
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   | |||||| | ||| || ||||||||||||||||||| || |       |||||||    
T  2645215 tttttatggcattgagtaattttttgttttatacgatttttgaggaacaaaatgctattttggtattttagacaacttgtatgtgg-------gacaaaa 2645123  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  2645122 agttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctctc-cttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 2645025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 136
Target Start/End: Complemental strand, 35473122 - 35473046
Alignment:
Q  60 ggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| |||||||| | ||||||||| | ||||| ||||||||||| |||  | ||||||||||||||||||||||    
T  35473122 ggtattaaataatttttggtcttatacaaatttttatggacaaaaggatattatggtattttagacaacttgtacgt 35473046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 63 - 134
Target Start/End: Complemental strand, 12672593 - 12672522
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtac 134  Q
    ||||| |||||| |||| ||||||||||||| | |||||||| | ||| || ||||||||||||||||||||    
T  12672593 attgagtaattttttgttttatacgatttttggaggacaaaatgctattttggtattttagacaacttgtac 12672522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 42365538 - 42365617
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgt 132  Q
    |||||| || ||||| |||||| |||| ||||| ||||||| | |||||||| ||||| || ||||||||||||||||||    
T  42365538 tttttatggcattgagtaattttttgttttatatgatttttaggggacaaaatgttattttggtattttagacaacttgt 42365617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 250
Target Start/End: Original strand, 18278948 - 18279053
Alignment:
Q  145 agacaaaaagttgtgcagtgatttagtgagggacaaaaattct-gtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaa 243  Q
    |||||||||||||||  |||||||||||||| ||||||||| | ||||||||    ||  |||||| | ||||||| |||||||||| || |||||||||    
T  18278948 agacaaaaagttgtgacgtgatttagtgaggaacaaaaattttagtttttgtgccgtcctttgtctccagtttgtcttgtccctaaaaca-ttttataaa 18279046  T
Q  244 tcaaaca 250  Q
    |||||||    
T  18279047 tcaaaca 18279053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 260
Target Start/End: Original strand, 35114762 - 35114947
Alignment:
Q  69 taatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcagtgattt 168  Q
    |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||| |||||  ||| |||    
T  35114762 taattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaaaattgtgttgtggttt 35114854  T
Q  169 agtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaacaatatacaact 260  Q
     ||||||||||||||| |  ||||||||| | ||  ||| ||   ||||||||||| ||| || |||||||| |||||||||| || ||||||    
T  35114855 ggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaacactagacaact 35114947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 136
Target Start/End: Original strand, 2086043 - 2086116
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    ||||| |||||| |||| |||||||||||||   |||||||| ||||| || |||||| |||||||||||||||    
T  2086043 attgagtaattttttgttttatacgatttttgagggacaaaatgttattttggtatttcagacaacttgtacgt 2086116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 184
Target Start/End: Original strand, 26418900 - 26419008
Alignment:
Q  69 taatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcagtgattt 168  Q
    |||||| |||| |||||| |||||| | ||| |||| ||||| || |||||||||||||||||||||| |       ||||||||||||||| ||| |||    
T  26418900 taattttttgttttatacaatttttgggggataaaatgttattttggtattttagacaacttgtacgtgg-------gacaaaaagttgtgctgtggttt 26418992  T
Q  169 agtgagggacaaaaat 184  Q
     |||||| ||||||||    
T  26418993 ggtgaggaacaaaaat 26419008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 3913589 - 3913506
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| || |||||||||| | |||| ||||||||||||| | |  ||||| | ||| || ||||||||||||||||||||||    
T  3913589 tttttatggcattgaataatattttgttttatacgatttttggggagcaaaatgctattttggtattttagacaacttgtacgt 3913506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 30326460 - 30326377
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| || ||||| |||||| |||| |||||||||||||   ||||||||   ||| || ||||||||||||||||||||||    
T  30326460 tttttatggaattgagtaattttttgttttatacgatttttgagggacaaaatactattttggtattttagacaacttgtacgt 30326377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 184
Target Start/End: Original strand, 1247194 - 1247232
Alignment:
Q  146 gacaaaaagttgtgcagtgatttagtgagggacaaaaat 184  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  1247194 gacaaaaagttgtgcagtggtttggtgagggacaaaaat 1247232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 198
Target Start/End: Complemental strand, 12939406 - 12939290
Alignment:
Q  76 ttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcagtgatttagtgagg 175  Q
    |||| ||||| ||||||| | |||||||| ||||| || |||| |||||||||||||||||        ||| |||||||||||| ||| ||| |||| |    
T  12939406 ttgttttatatgatttttgggggacaaaatgttattttggtatcttagacaacttgtacgt-------gagataaaaagttgtgctgtggtttggtgaag 12939314  T
Q  176 gacaaaaat-tctgtttttgtcat 198  Q
    ||||||||| || |||||||||||    
T  12939313 gacaaaaatatcagtttttgtcat 12939290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 26796216 - 26796272
Alignment:
Q  79 tcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    ||||||| ||||||| |||||||||||  ||| || ||||||||||||||||||||||    
T  26796216 tcttatatgatttttggtggacaaaagactat-ttggtattttagacaacttgtacgt 26796272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 250
Target Start/End: Original strand, 37308702 - 37308807
Alignment:
Q  146 gacaaaaagttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaat 244  Q
    ||||||||||||||  ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||    
T  37308702 gacaaaaagttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaat 37308801  T
Q  245 caaaca 250  Q
    ||||||    
T  37308802 caaaca 37308807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 60 - 136
Target Start/End: Complemental strand, 30798611 - 30798535
Alignment:
Q  60 ggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| | |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||| |||||||||||    
T  30798611 ggtatttagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagataacttgtacgt 30798535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 31194041 - 31193990
Alignment:
Q  214 tttgtcctgtccctaaagcagttttataaatcaaacaatatacaactgaagtt 266  Q
    ||||| || ||||||||| ||||||| |||||||||| |||||||||||||||    
T  31194041 tttgttctatccctaaag-agttttacaaatcaaacattatacaactgaagtt 31193990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 31212674 - 31212623
Alignment:
Q  214 tttgtcctgtccctaaagcagttttataaatcaaacaatatacaactgaagtt 266  Q
    ||||| || ||||||||| ||||||| |||||||||| |||||||||||||||    
T  31212674 tttgttctatccctaaag-agttttacaaatcaaacattatacaactgaagtt 31212623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 60 - 136
Target Start/End: Complemental strand, 38993193 - 38993117
Alignment:
Q  60 ggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||||||||||||  ||| |||||  |||||| |  ||| ||| | ||| |||||||||||||||||||||||||    
T  38993193 ggtattgaataattttctgtattatattatttttgggtgacgaaatgctatttttgtattttagacaacttgtacgt 38993117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 148; Significance: 9e-78; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 455 - 680
Target Start/End: Original strand, 842577 - 842803
Alignment:
Q  455 gtgattttctgcttgcatgtcaaatacttagccataaacccataaattgagttttgctgagttgtaaattggtacatttggggctataaagtgcataatt 554  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  842577 gtgattttctgcttgcatgtcaaacacttagccataaacccataaatagagttttgctgagttgtaaattagtacatttggggctataaagtgcataatt 842676  T
Q  555 ttagtgtggtaactttctgagaaa-gnnnnnnnnntggcttcctctgatgacagagatacagtagtgaagagacttagacatttgggcagaaaactatcc 653  Q
    ||||||||||||||||| ||||||           ||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  842677 ttagtgtggtaactttcggagaaataaaaaaaaaatggcttcttctgatgacagagatacagtagtgaagagtcttagacatttggggagaaaactatcc 842776  T
Q  654 aaaaacctagcttcttcagctgatatt 680  Q
    ||||| ||||||||||| | |||||||    
T  842777 aaaaatctagcttcttctgttgatatt 842803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 45 - 266
Target Start/End: Original strand, 3649592 - 3649807
Alignment:
Q  45 atcacaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaat 144  Q
    ||||||| |||||| ||||||||||||||| |||| ||||| | ||||| | |||| ||| ||||| || || ||||||||||||||||||| |          
T  3649592 atcacaaatttttatggtattgaataatttcttgttttatatgttttttgggggacgaaatgttattttggtgttttagacaacttgtacgtgg------ 3649685  T
Q  145 agacaaaaagttgtgcagtgatttagtgagggacaaaaattct-gtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaa 243  Q
     ||||||||||||||| ||| ||| |||||||||||||||| | ||||||||| | ||  ||| |||| |||||| |||||||| || |||||||| |||    
T  3649686 -gacaaaaagttgtgctgtggtttggtgagggacaaaaattttagtttttgtcctgtcccttgccttcagtttgttctgtccctgaaacagttttacaaa 3649784  T
Q  244 tcaaacaatatacaactgaagtt 266  Q
    ||||||| || ||||||| ||||    
T  3649785 tcaaacactagacaactggagtt 3649807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 363 - 435
Target Start/End: Original strand, 842455 - 842527
Alignment:
Q  363 tagagagaatttcttatgaggaaaccgaattaaaaagtgtgaaatatatttcctacaaagtgaaaataataaa 435  Q
    ||||||||||||||| ||| |||| ||| |||||||||||||||||||||||||||||||| |||||||||||    
T  842455 tagagagaatttcttttgaagaaaacgatttaaaaagtgtgaaatatatttcctacaaagtcaaaataataaa 842527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 48 - 250
Target Start/End: Complemental strand, 22318511 - 22318315
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaataga 147  Q
    |||| |||||| | ||||||||||||| |||| ||||| ||||||| |  ||||||| ||||| || || ||||||||||||| ||||||       |||    
T  22318511 acaaatttttatgatattgaataatttcttgttttatatgatttttggatgacaaaatgttattttggtgttttagacaacttctacgta-------aga 22318419  T
Q  148 caaaaagttgtgcagtgatttagtgagggacaaaaatt-ctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatca 246  Q
    ||||||||||||  ||| ||| |||||||||||||||| |   ||||||| | ||  ||| |||| |||||| ||||||||||| |||||||| ||||||    
T  22318418 caaaaagttgtgttgtggtttggtgagggacaaaaatttcaaattttgtcctgtctcttgccttcagtttgttctgtccctaaaacagttttacaaatca 22318319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 39078625 - 39078816
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| ||||||||||||||| || | ||||| ||||||| | |||||||| ||||| || || |||||||||||| ||||||||       |||||||    
T  39078625 tttttatggtattgaataatttcttattttatatgatttttgggggacaaaatgttattttggtgttttagacaactcgtacgtag-------gacaaaa 39078717  T
Q  153 agttgtgcagtgatttagtgagggacaaaaa-ttctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    | |||||  ||| ||| |||||||||||||| ||| | ||||||| ||||  ||| || | |||||| |||||||| || |||||||| ||||||||||    
T  39078718 atttgtgttgtggtttggtgagggacaaaaatttcaggttttgtcctatctcttgcctccagtttgttctgtccctgaaacagttttacaaatcaaaca 39078816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 50728035 - 50727844
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || |||||||||||| |||| |||||||||||||   |||||||| ||||| || |||||||||||||||||||||| |       |||||||    
T  50728035 tttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgg-------gacaaaa 50727943  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||  ||| |||  |||||||||||||| |  ||||||||| | ||  ||| |||| ||||||| ||| ||| || |||||||| ||||||||||    
T  50727942 agttgtgttgtggtttgatgagggacaaaaatatgagtttttgtcctgtcccttgccttcagtttgtcatgtacctgaaacagttttacaaatcaaaca 50727844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 50736049 - 50735858
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || |||||||||||| |||| |||||||||||||   |||||||| ||||| || |||||||||||||||||||||| |       |||||||    
T  50736049 tttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgg-------gacaaaa 50735957  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||  ||| |||  |||||||||||||| |  ||||||||| | ||  ||| |||| ||||||| ||| ||| || |||||||| ||||||||||    
T  50735956 agttgtgttgtggtttgatgagggacaaaaatatgagtttttgtcctgtcccttgccttcagtttgtcatgtacctgaaacagttttacaaatcaaaca 50735858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 459 - 526
Target Start/End: Original strand, 10452891 - 10452958
Alignment:
Q  459 ttttctgcttgcatgtcaaatacttagccataaacccataaattgagttttgctgagttgtaaattgg 526  Q
    |||||||||||||||||||| |||||| |||||| || |||||||||||||||||||||||| |||||    
T  10452891 ttttctgcttgcatgtcaaacacttagtcataaatccttaaattgagttttgctgagttgtacattgg 10452958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 23521844 - 23522035
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  23521844 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 23521936  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||  ||| ||| ||||||||||||||| |  ||||||||| ||||  |||  | | ||||||||||| ||| || |||||||| ||||||||||    
T  23521937 agttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctatcccttgcttccagtttgtcctgtacctgaaacagttttacaaatcaaaca 23522035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 29785659 - 29785468
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || |||||||||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  29785659 tttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 29785567  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    || ||||  ||| ||| ||||||||||||||| |  ||||||||  | ||  |||||| | ||||||||||| ||| || |||||||| ||||||||||    
T  29785566 agctgtgttgtggtttggtgagggacaaaaatatgagtttttgttctgtcccttgtctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 29785468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 250
Target Start/End: Complemental strand, 33177153 - 33176963
Alignment:
Q  54 ttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaa 153  Q
    ||||| || ||||| ||||||  ||| ||||||||||||| | |||||||| ||||| || |||||||||||||||||| ||| |       ||||||||    
T  33177153 ttttatggcattgagtaattttatgttttatacgatttttgggggacaaaatgttattttggtattttagacaacttgtgcgtgg-------gacaaaaa 33177061  T
Q  154 gttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    ||||||  ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  33177060 gttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 33176963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 266
Target Start/End: Complemental strand, 50178605 - 50178407
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagac-aaaaagttgtgca 161  Q
    |||||||||||| |||| ||||||||||||| | |||||||| | ||| ||  ||||||||||||||||||||| |       ||| ||||||||||||     
T  50178605 attgaataattttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgg-------gacaaaaaagttgtgct 50178513  T
Q  162 gtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaacaatatacaact 260  Q
    ||| |||  ||||| |||||||| || ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| |||||||||| |  ||||||    
T  50178512 gtggtttgctgaggcacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaact 50178413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 48 - 266
Target Start/End: Original strand, 26083297 - 26083510
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttg-tattttagacaacttgtacgtagataaatag 146  Q
    |||| |||||| |||||||||||||||  ||| ||||| | ||||| | |||| ||| ||||| || | | |||||||||||||||| || |       |    
T  26083297 acaaatttttatggtattgaataatttcatgttttatatgctttttgggggacgaaatgttattttgggtgttttagacaacttgtaagtgg-------g 26083389  T
Q  147 acaaaaagttgtgcagtgatttagtgagggacaaaaatt-ctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatc 245  Q
    |||||||||| ||| ||| ||| |||||||||||||||| | ||||||||||| ||  ||| || | |||||| |||||||| || || ||||| |||||    
T  26083390 acaaaaagttatgctgtggtttggtgagggacaaaaatttcagtttttgtcatgtcccttgcctccagtttgttctgtccctgaaacaattttacaaatc 26083489  T
Q  246 aaacaatatacaactgaagtt 266  Q
    ||||| || ||||||||||||    
T  26083490 aaacactaaacaactgaagtt 26083510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 184
Target Start/End: Complemental strand, 33552964 - 33552840
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  33552964 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 33552872  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat 184  Q
    |||||||| ||| ||| |||||||||||||||    
T  33552871 agttgtgctgtggtttggtgagggacaaaaat 33552840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 250
Target Start/End: Complemental strand, 38486368 - 38486188
Alignment:
Q  64 ttgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcagt 163  Q
    |||| |||||| |||| |||||| ||||||   |||||||| | ||| ||  |||||||||||||||||||||       ||||||||||||||||| ||    
T  38486368 ttgagtaattttttgttttatactatttttgagggacaaaatgctattttgatattttagacaacttgtacgt-------tagacaaaaagttgtgctgt 38486276  T
Q  164 gatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    | ||| ||||||||||||||| |  ||||||||||| ||  ||| || | |||| |||||| ||| || |||||||| ||||||||||    
T  38486275 ggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttatcctgtacctgaaacagttttacaaatcaaaca 38486188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 184
Target Start/End: Original strand, 43641063 - 43641187
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  43641063 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 43641155  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat 184  Q
    |||||||| ||| ||| |||||||||||||||    
T  43641156 agttgtgctgtggtttggtgagggacaaaaat 43641187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 250
Target Start/End: Complemental strand, 44324469 - 44324273
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaataga 147  Q
    |||| |||||| || |||||||||||| |||| ||||||||||||| | |||| ||| | ||| || |||||| | ||||||||||||| |       ||    
T  44324469 acaaatttttatggcattgaataattttttgttttatacgatttttgggggacgaaatgctattttggtatttaaaacaacttgtacgtgg-------ga 44324377  T
Q  148 caaaaagttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatca 246  Q
    ||||||||||||| ||| ||| ||||||||||||||| || |||||||||   ||  ||| ||   ||||||||||| ||| || |||||||| ||||||    
T  44324376 caaaaagttgtgctgtggtttggtgagggacaaaaatatcagtttttgtcccgtcttttgcctctagtttgtcctgtacctgaaacagttttacaaatca 44324277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 20802653 - 20802462
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| ||||| |||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  20802653 tttttatggcattgagtaattttttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 20802561  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||  ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  20802560 agttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 20802462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 36743810 - 36743619
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| ||||||||||| |||||| ||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  36743810 tttttatggcattgagtaatttgttgttttatacaatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 36743718  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||  ||| ||||||||||||||| |   |||||||||| ||  ||| || | ||||||||||| ||| || |||||||| || |||||||    
T  36743717 agttgtgctgtagtttggtgagggacaaaaatatgaatttttgtcatgtcccttgcctccagtttgtcctgtacctgaaacagttttacaattcaaaca 36743619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 37865717 - 37865908
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || |||||||||||| |||| ||||||||||| |   |||||||| | ||| || |||||||||||||||||||| | |       |||||||    
T  37865717 tttttatggcattgaataattttttgttttatacgatttctgagggacaaaatgctattttggtattttagacaacttgtacatgg-------gacaaaa 37865809  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||  ||||||| ||||||||||||||| |  ||||||||||| ||  ||| || | | ||||| ||| ||| || |||||||| ||||||||||    
T  37865810 agttgtgttgtgatttggtgagggacaaaaatatgagtttttgtcatgtctcttgcctccagattgtcatgtacctgaaacagttttacaaatcaaaca 37865908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 250
Target Start/End: Complemental strand, 2725244 - 2725064
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||        | ||||||||||||||  |    
T  2725244 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacg--------tggacaaaaagttgtgatg 2725153  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    || ||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||||||  ||||||| ||||||||||    
T  2725152 tggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctaaaagagttttacaaatcaaaca 2725064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 14296561 - 14296644
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| || ||||| |||||| |||| ||||||||||||| |  ||||||| ||||| || ||||||||||||||||||||||    
T  14296561 tttttatggcattgagtaattttttgttttatacgatttttgggagacaaaatgttattttggtattttagacaacttgtacgt 14296644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 14314809 - 14314892
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| || ||||| |||||| |||| ||||||||||||| |  ||||||| ||||| || ||||||||||||||||||||||    
T  14314809 tttttatggcattgagtaattttttgttttatacgatttttgggagacaaaatgttattttggtattttagacaacttgtacgt 14314892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 55593849 - 55593932
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| ||||| || ||||||||||||||||||||||    
T  55593849 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgt 55593932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 136
Target Start/End: Complemental strand, 31445996 - 31445915
Alignment:
Q  54 ttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    ||||| ||||||| ||||||| || |||| |||||||||||||| |||||| ||||| ||||||||||||| || ||||||||    
T  31445996 ttttatggtattggataattt-ttatcttgtacgattttttgtgaacaaaaagttatttttgtattttagataatttgtacgt 31445915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 41711805 - 41712002
Alignment:
Q  47 cacaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatag 146  Q
    ||||| |||||| | ||||||||||||| |||| ||||||||| ||| | |||| ||| | ||| || |||||||||||||| |||||||        ||    
T  41711805 cacaaatttttatgctattgaataattttttgttttatacgatatttgggggacgaaatgctattttggtattttagacaacctgtacgt-------gag 41711897  T
Q  147 acaaaaagttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatc 245  Q
    |||||||||||| | ||| ||| ||||||||||||||| |  || |||||| | ||  ||| |||| ||||||||||| ||| || ||| |||| |||||    
T  41711898 acaaaaagttgtactgtggtttggtgagggacaaaaatatgagtctttgtcctgtcccttgccttcagtttgtcctgtacctgaaacagctttacaaatc 41711997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 41720816 - 41720890
Alignment:
Q  62 tattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    ||||| ||||||| | ||||||||| |||||||||||||||||  |||| ||||||||||||| || ||||||||    
T  41720816 tattgtataatttttagtcttatactattttttgtggacaaaaaattatttttgtattttagataatttgtacgt 41720890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 120
Target Start/End: Complemental strand, 43189883 - 43189817
Alignment:
Q  54 ttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattt 120  Q
    ||||| ||||||||||||||| |||||||||||||| ||| |||||||| | ||||| |||||||||    
T  43189883 ttttatggtattgaataattttttgtcttatacgatatttagtggacaataagttatttttgtattt 43189817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 250
Target Start/End: Complemental strand, 47642603 - 47642422
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    |||||||||||| |||| ||||||||||||| | |||||||| | ||| ||  ||||||||||||||||||||| |       ||||||||||||||  |    
T  47642603 attgaataattttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgg-------gacaaaaagttgtgttg 47642511  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    || |||  |||||||||||||| || |||||| || | ||  ||  || | ||||||||||| ||| || |||||||| ||||||||||    
T  47642510 tggtttgctgagggacaaaaatatcagtttttatcttgtctcttacctccagtttgtcctgtgcctgaaacagttttacaaatcaaaca 47642422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 266
Target Start/End: Complemental strand, 50729579 - 50729457
Alignment:
Q  145 agacaaaaagttgtgcagtgatttagtgagggacaaaaatt-ctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaa 243  Q
    |||||||||||||||| ||| ||| ||||  |||||||||| | ||||||||||| ||  ||| || | |||||| |||||||| || |||||||| |||    
T  50729579 agacaaaaagttgtgctgtggtttggtgatagacaaaaatttcagtttttgtcatgtcccttgcctccagtttgttctgtccctgaaacagttttacaaa 50729480  T
Q  244 tcaaacaatatacaactgaagtt 266  Q
    ||||||| |  ||||||||||||    
T  50729479 tcaaacactggacaactgaagtt 50729457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 250
Target Start/End: Original strand, 52949695 - 52949875
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    |||||||||||| |||| ||||||||||||| | |||||||| | ||| ||  ||||||||||||||||||||| |       ||||||||||||||  |    
T  52949695 attgaataattt-ttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgg-------gacaaaaagttgtgttg 52949786  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    || |||  |||||||||||||| || ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| |||| |||||    
T  52949787 tggtttgctgagggacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatgaaaca 52949875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 43739432 - 43739505
Alignment:
Q  60 ggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgta 133  Q
    |||||| |||||||| | ||||||||| |||||||||||| |||| ||||| ||  ||||||||||||||||||    
T  43739432 ggtattaaataatttttggtcttatacaattttttgtggataaaatgttattttaatattttagacaacttgta 43739505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 53 - 184
Target Start/End: Original strand, 56154585 - 56154709
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| ||||| |||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  56154585 tttttatggcattgagtaattttttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 56154677  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat 184  Q
    |||||||| ||| ||| |||||||||||||||    
T  56154678 agttgtgctgtggtttggtgagggacaaaaat 56154709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 250
Target Start/End: Original strand, 20694351 - 20694526
Alignment:
Q  69 taatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcagtgattt 168  Q
    |||||| |||| |||||  |||||| | |||||||| | ||| || |||||||||||||||||||||| |       |||||||||||| |  ||| |||    
T  20694351 taattttttgttttatataatttttgggggacaaaatgctattttggtattttagacaacttgtacgttg-------gacaaaaagttgcgttgtggttt 20694443  T
Q  169 agtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
     ||||||||||||||| |  ||||||||| | ||  ||| |||| ||||||||||| |||||| |||||||| |||| |||||    
T  20694444 ggtgagggacaaaaatatgagtttttgtcctgtcctttgccttcagtttgtcctgtacctaaaacagttttacaaattaaaca 20694526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 250
Target Start/End: Original strand, 24210283 - 24210474
Alignment:
Q  54 ttttacggtattgaataatttgttgtcttatacgattttttgtggac-aaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    ||||| |||||||| |||||| |||| |||||||||||||   |||| |||| | ||| || |||||||||||||||||||||| |       || ||||    
T  24210283 ttttatggtattgagtaattttttgttttatacgatttttgagggacaaaaatgctattttggtattttagacaacttgtacgtgg-------gataaaa 24210375  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||| ||| ||||||||||| ||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  24210376 agttgtgctgtggtttggtgagggacaataatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 24210474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 37695668 - 37695580
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||| |||||| || |||||||||||| |||| ||||||||||||| | |||| ||| ||||| ||  ||||||||||||| |||||||    
T  37695668 acaaatttttatggcattgaataattttttgttttatacgatttttgggggacgaaatgttattttgatattttagacaacctgtacgt 37695580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 250
Target Start/End: Original strand, 38812500 - 38812675
Alignment:
Q  69 taatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcagtgattt 168  Q
    |||||| |||| |||||||||||||   | |||||| | ||| || |||||||||||||||||||||| |       ||||||||||||||  ||| |||    
T  38812500 taattttttgttttatacgatttttgcggaacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaaagttgtgttgtggttt 38812592  T
Q  169 agtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
     ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  38812593 ggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 38812675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 46680632 - 46680441
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| ||||| ||||||||  |||||||| | |||  | ||||||||||||| ||||||||        ||||||||    
T  46680632 tttttatggcattgagtaattttttgttttatatgattttttagggacaaaatgctattatggtattttagacaatttgtacgtg-------agacaaaa 46680540  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||| ||| || |||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  46680539 agttgtgctgtggtttggtaagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 46680441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 48 - 185
Target Start/End: Original strand, 7001813 - 7001941
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaataga 147  Q
    |||| |||||| || |||||||||||| | |||||||||||||||| |||||| ||| ||||| || ||| |||||||||||| ||| ||||       |    
T  7001813 acaaatttttatggcattgaataatttttggtcttatacgatttttggtggac-aaatgttattttggta-tttagacaacttatacataga-------a 7001903  T
Q  148 caaaaagttgtgcagtgatttagtgagggacaaaaatt 185  Q
    ||||||||||||  ||| ||| ||||||||||||||||    
T  7001904 caaaaagttgtgttgtggtttggtgagggacaaaaatt 7001941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 63 - 138
Target Start/End: Original strand, 9807130 - 9807205
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtag 138  Q
    ||||||||||||  ||| ||||||||||||| | |||| ||| | ||| || ||||||||||||||||||||||||    
T  9807130 attgaataattttatgttttatacgatttttggaggacgaaatgctattttggtattttagacaacttgtacgtag 9807205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 63 - 250
Target Start/End: Original strand, 24002312 - 24002494
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaag-gttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgca 161  Q
    ||||| |||||| |||| |||||||||||||   ||||||||  | ||| || |||||||||||||||||||||| |       |||||||||||||||     
T  24002312 attgagtaattttttgttttatacgatttttgagggacaaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaaagttgtgct 24002404  T
Q  162 gtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || | |||||| ||||||||||    
T  24002405 gtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaactgttttacaaatcaaaca 24002494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 29616134 - 29616217
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| ||||| || ||||||||||||| ||||||||    
T  29616134 tttttatggcattgagtaattttttgttttatacgatttttaagggacaaaatgttattttggtattttagacaatttgtacgt 29616217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 54 - 136
Target Start/End: Complemental strand, 45577811 - 45577731
Alignment:
Q  54 ttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    ||||| |||||||||||||||  |||||||  | ||||||||||||||||| || || || ||||||||||||||||| ||||    
T  45577811 ttttatggtattgaataattt--tgtcttaatcaattttttgtggacaaaatgtcattttggtattttagacaacttgcacgt 45577731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 49152221 - 49152139
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| || ||||| |||||| |||| |||||||||||||  ||||||||| ||||| ||||  |||||||||||||||||||    
T  49152221 tttttatggcattgagtaattttttgttttatacgatttttgatggacaaaatgttat-tttggtttttagacaacttgtacgt 49152139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 184
Target Start/End: Original strand, 1231298 - 1231399
Alignment:
Q  76 ttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcagtgatttagtgagg 175  Q
    |||| |||||||||||||   |||||||| ||||| ||  ||||||||||||||||||||| |       ||||||||||||||| ||| ||| ||||||    
T  1231298 ttgttttatacgatttttgagggacaaaatgttattttgatattttagacaacttgtacgtgg-------gacaaaaagttgtgctgtggttttgtgagg 1231390  T
Q  176 gacaaaaat 184  Q
    |||||||||    
T  1231391 gacaaaaat 1231399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 184
Target Start/End: Complemental strand, 55065460 - 55065331
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaataga 147  Q
    |||| |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| ||  ||||||||||||||||||||| |       ||    
T  55065460 acaaatttttatggcattgagtaattttttgttttatacgatttttgaaggacaaaatgctattttgatattttagacaacttgtacgtgg-------ga 55065368  T
Q  148 caaaaagttgtgcagtgatttagtgagggacaaaaat 184  Q
    ||||||||||||  ||| ||| |||||||||||||||    
T  55065367 caaaaagttgtgttgtggtttggtgagggacaaaaat 55065331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 184
Target Start/End: Complemental strand, 9512462 - 9512338
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| ||||| |||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  9512462 tttttatggcattgagtaattttttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 9512370  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat 184  Q
    |||||||| ||| ||| |||| ||||||||||    
T  9512369 agttgtgctgtggtttggtgaaggacaaaaat 9512338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 250
Target Start/End: Original strand, 36497267 - 36497372
Alignment:
Q  146 gacaaaaagttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaat 244  Q
    ||||||||||||||  ||| ||| ||||||||||||||| |  ||||||||| | ||  |||||| | ||||||||||| ||| || |||||||| ||||    
T  36497267 gacaaaaagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtctcttgtctccagtttgtcctgtacctgaaacagttttacaaat 36497366  T
Q  245 caaaca 250  Q
    ||||||    
T  36497367 caaaca 36497372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 248
Target Start/End: Complemental strand, 44649274 - 44649097
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    ||||||||||||  ||| ||||||||||||| | |||||||| | ||| ||  ||||||||||||||||||| | |       ||||||||||||||  |    
T  44649274 attgaataattt--tgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacatgg-------gacaaaaagttgtgttg 44649184  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaa 248  Q
    || |||  |||||||||||||| || ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||    
T  44649183 tggtttgctgagggacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaa 44649097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 136
Target Start/End: Original strand, 54542964 - 54543037
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    ||||| |||||| |||| |||||||||||||   |||||||| | ||| || ||||||||||||||||||||||    
T  54542964 attgagtaattttttgttttatacgatttttgagggacaaaatgatattttggtattttagacaacttgtacgt 54543037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 12600850 - 12601041
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| || ||| |||| ||| ||||||||||  |||||||| | ||| || ||||||||||||||||||||||        ||||||||    
T  12600850 tttttatggcattgagtagttttttgttttaaacgattttttagggacaaaatgctattttggtattttagacaacttgtacgt-------gagacaaaa 12600942  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||  ||| |||  |||||||||||||| |  ||||||||| | ||  || ||| | ||||||||||| ||| || | |||||| ||||||||||    
T  12600943 agttgtgttgtggtttgatgagggacaaaaatatgagtttttgtcttgtcccttatctccagtttgtcctgtacctgaaactgttttacaaatcaaaca 12601041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 40792406 - 40792462
Alignment:
Q  78 gtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtac 134  Q
    ||||||||||||||||  ||||||||| | ||| ||||||||||||| |||||||||    
T  40792406 gtcttatacgatttttgatggacaaaaagctatttttgtattttagataacttgtac 40792462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 268
Target Start/End: Complemental strand, 53200676 - 53200556
Alignment:
Q  149 aaaaagttgtgcagtgatttagtgagggacaaaaa-ttctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaa 247  Q
    |||||||||||| ||| ||| |||||||||||||| ||| ||||||||||| |   ||| || | |||| ||||||| || || |||||||  |||||||    
T  53200676 aaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtcatgttccttgcctccagtttatcctgtctctgaaacagttttgcaaatcaa 53200577  T
Q  248 acaatatacaactgaagttat 268  Q
    ||| || ||| ||||||||||    
T  53200576 acactaaacagctgaagttat 53200556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 4325771 - 4325838
Alignment:
Q  69 taatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| |||| |||| |||||||| | |||||||| | ||| || ||||||||||||||||||||||    
T  4325771 taattttttgttttatgcgatttttgggggacaaaatgctattttggtattttagacaacttgtacgt 4325838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 264
Target Start/End: Original strand, 29592945 - 29593064
Alignment:
Q  146 gacaaaaagttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaat 244  Q
    ||||||||||||||| ||| |||||||| | |||||||| |  ||||||||||| ||  |||  | | ||||||||||| ||| || |||||||| ||||    
T  29592945 gacaaaaagttgtgctgtggtttagtgaagtacaaaaatatgagtttttgtcatgtcccttgcatccagtttgtcctgtacctgaaacagttttacaaat 29593044  T
Q  245 caaacaatatacaactgaag 264  Q
    |||||| |  ||||||||||    
T  29593045 caaacactggacaactgaag 29593064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 184
Target Start/End: Original strand, 32181237 - 32181351
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    ||||||||||||  ||| |||||| |||||| | |||| ||| | ||| || |||||||||||||||||||||| |       ||||||||||||| | |    
T  32181237 attgaataattttatgttttatactatttttgggggacgaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaaagttgtactg 32181329  T
Q  163 tgatttagtgagggacaaaaat 184  Q
    || ||| |||||||||||||||    
T  32181330 tggtttggtgagggacaaaaat 32181351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 47361531 - 47361452
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgt 132  Q
    |||||| | |||||| |||||| |||| |||||||| |||||  |||||||| | ||| || ||||||||||||||||||    
T  47361531 tttttatgatattgagtaattttttgttttatacgaatttttagggacaaaatgctattttggtattttagacaacttgt 47361452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 263
Target Start/End: Original strand, 32858424 - 32858466
Alignment:
Q  221 tgtccctaaagcagttttataaatcaaacaatatacaactgaa 263  Q
    |||||||||||||||||||||||||||||| | ||||| ||||    
T  32858424 tgtccctaaagcagttttataaatcaaacattgtacaattgaa 32858466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 266
Target Start/End: Original strand, 11056092 - 11056213
Alignment:
Q  146 gacaaaaagttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaat 244  Q
    |||| |||||||||  ||| ||| || |||||||||||| || ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||    
T  11056092 gacataaagttgtgttgtggtttggtaagggacaaaaatatcagtttttgtcttgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaat 11056191  T
Q  245 caaacaatatacaactgaagtt 266  Q
    |||||| |  ||||||||||||    
T  11056192 caaacactggacaactgaagtt 11056213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 43739557 - 43739614
Alignment:
Q  214 tttgtcctgtccctaaagcagttttataaatcaaacaatatacaactgaagttatctt 271  Q
    |||||| ||||||| || |||||||| |||||||||| | ||||||||||||| ||||    
T  43739557 tttgtcatgtccctcaaacagttttacaaatcaaacattttacaactgaagttgtctt 43739614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 9435371 - 9435439
Alignment:
Q  62 tattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaactt 130  Q
    |||||||| |||| | ||||||||| |||||| || ||||||| | ||| ||||||||||||| |||||    
T  9435371 tattgaattatttttggtcttataccatttttggtagacaaaaagctatttttgtattttagataactt 9435439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 23327897 - 23327965
Alignment:
Q  69 taatttgttgtcttatacgattttttgtgg-acaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| |||| ||||||||||||| | || | |||| ||||| || ||||||||||||||||||||||    
T  23327897 taattttttgttttatacgatttttggggggataaaatgttattttggtattttagacaacttgtacgt 23327965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 42869937 - 42870021
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggac-aaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||| |||| | ||| ||||||||||||||||||| |||||    
T  42869937 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaaatgctatttttgtattttagacaacttatacgt 42870021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 56487356 - 56487292
Alignment:
Q  71 atttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacg 135  Q
    |||| |||| ||||| ||||||| | |||||||| ||||| || |||||||| ||||||||||||    
T  56487356 attttttgttttatatgatttttggaggacaaaatgttattttggtattttaaacaacttgtacg 56487292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 2e-26; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 48 - 250
Target Start/End: Complemental strand, 3867777 - 3867581
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaataga 147  Q
    ||||||||||| ||||||||||||||| |||| ||||| ||||||| | |||||||| | ||| || || ||||||| |||||||||||||       ||    
T  3867777 acaagtttttatggtattgaataatttcttgttttatatgatttttgggggacaaaatgctattttggtgttttagaaaacttgtacgtag-------ga 3867685  T
Q  148 caaaaagttgtgcagtgatttagtgagggacaaaaa-ttctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatca 246  Q
    ||||||||||||| ||| ||| |||||||||||||| ||| | ||||||||| ||  |||||| | || ||| |||||||| || |||||||| ||||||    
T  3867684 caaaaagttgtgctgtggtttggtgagggacaaaaatttcaggttttgtcatgtctcttgtctccagtatgttctgtccctgaaacagttttacaaatca 3867585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 63 - 260
Target Start/End: Complemental strand, 39052951 - 39052760
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    ||||| ||||||||||| ||||||||||||| | |||||||| ||||| || |||||||||||||||||||||| |       ||||||||||||||  |    
T  39052951 attgagtaatttgttgttttatacgatttttgggggacaaaatgttattttggtattttagacaacttgtacgtgg-------gacaaaaagttgtgttg 39052859  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaacaatatacaact 260  Q
    || ||| ||||| ||||||||| |  ||||||||| | || |||| || | ||||||||||| ||| || |||||||| |||||||||| || ||||||    
T  39052858 tggtttggtgagagacaaaaatatgagtttttgtcctgtccattgcctccagtttgtcctgtgcctgaaacagttttacaaatcaaacactagacaact 39052760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 53557918 - 53557727
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || ||||||||||||||||||||||        ||||||||    
T  53557918 tttttatggcattgagtaattttttgttttatacgatttttgaaggacaaaatgctattttggtattttagacaacttgtacgtg-------agacaaaa 53557826  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||||||| ||| ||||||||||||| | |  ||||||||| | || |||| || | ||||||||||| |||||| |||||||| ||||||||||    
T  53557825 agttgtgcagtggtttggtgagggacaaaactatgagtttttgtcctgtccattgcctccagtttgtcctgtacctaaaacagttttacaaatcaaaca 53557727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 63 - 260
Target Start/End: Complemental strand, 49749024 - 49748833
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    |||||||||||| |||| ||||||||||||| | |||| ||| ||||| || |||||| | ||||||||||||| |       ||||||||||||||  |    
T  49749024 attgaataattttttgttttatacgatttttgggggacgaaatgttattttggtatttaaaacaacttgtacgtgg-------gacaaaaagttgtgttg 49748932  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaacaatatacaact 260  Q
    || ||| ||||||||||||||| || ||||||||||| ||  ||| || | ||||||||||| ||| || |||||||| |||||||||| || ||||||    
T  49748931 tggtttggtgagggacaaaaatatcagtttttgtcatgtcctttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactaaacaact 49748833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 54 - 250
Target Start/End: Original strand, 51296544 - 51296734
Alignment:
Q  54 ttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaa 153  Q
    ||||| |||||||| |||||| |||| ||||||||||||||| |||||||| | ||| ||||||||||||||||||||||| |||       ||||||||    
T  51296544 ttttatggtattgagtaattttttgttttatacgattttttggggacaaaatgctatttttgtattttagacaacttgtacttag-------gacaaaaa 51296636  T
Q  154 gttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
     |||||  ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| |||| |||||    
T  51296637 attgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcctttgcctccagtttgtcctgtacctgaaacagttttacaaattaaaca 51296734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 28675752 - 28675943
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  28675752 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 28675844  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||  ||| ||| ||||||||||||||| |  ||||||||| ||||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  28675845 agttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctatcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 28675943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 44116901 - 44117092
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| ||||||||||||||||||||||||| |       |||||||    
T  44116901 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctatttttgtattttagacaacttgtacgtgg-------gacaaaa 44116993  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||||||| |||  |||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || | |||||| ||||||||||    
T  44116994 agttgtgcagtggtttgatgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacggttttacaaatcaaaca 44117092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 51259903 - 51259712
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| ||||| |||||||   |||||||| ||||| || |||||||||||||||||||||| |       |||||||    
T  51259903 tttttatggcattgagtaattttttgttttatatgatttttaagggacaaaatgttattttggtattttagacaacttgtacgtgg-------gacaaaa 51259811  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  51259810 agttgtgccgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 51259712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 54 - 198
Target Start/End: Original strand, 44000224 - 44000362
Alignment:
Q  54 ttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaa 153  Q
    ||||| ||||||||||||||| | |||||||||||||||| ||||||||||   ||| ||||||||| ||| ||||||||||| |       ||||||||    
T  44000224 ttttatggtattgaataatttttggtcttatacgatttttggtggacaaaaaactatttttgtatttcagataacttgtacgtgg-------gacaaaaa 44000316  T
Q  154 gttgtgcagtgatttagtgaggg-acaaaaattctgtttttgtcat 198  Q
     |||||  ||| ||||||||||| | ||||||||||||||||||||    
T  44000317 attgtgatgtggtttagtgagggaaaaaaaattctgtttttgtcat 44000362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 63 - 250
Target Start/End: Complemental strand, 31883135 - 31882954
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    |||||||||||| |||| ||||||||||||| | |||||||| | ||| ||  ||||||||||||||||||||| |       ||||||||||||||| |    
T  31883135 attgaataattttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgg-------gacaaaaagttgtgctg 31883043  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    || |||  ||||| |||||||| || ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  31883042 tggtttgctgaggcacaaaaatatcagtttttgtcgtgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 31882954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 63 - 266
Target Start/End: Complemental strand, 50386569 - 50386372
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    |||||||||||| |||| |||||| |||||| | | |||||| | ||| ||  |||||||||||||||||||||||       ||||||||||||||| |    
T  50386569 attgaataattttttgttttatacaatttttggggaacaaaatgctattttgatattttagacaacttgtacgtag-------gacaaaaagttgtgctg 50386477  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaacaatatacaactg 261  Q
    || |||  ||||| |||||||| ||  |||||||||| ||  ||| || | ||||||||||| ||| || |||||||| |||||||||| || |||||||    
T  50386476 tggtttgttgaggcacaaaaatatcaatttttgtcatgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactagacaactg 50386377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 24571243 - 24571434
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| ||||||||||| |||| |||||||| | ||||||||   ||| ||||||||||||||||||||||| | |       |||||||    
T  24571243 tttttatggcattgagtaatttgttgttttattcgatttttgggggacaaaatcctatttttgtattttagacaacttgtacatgg-------gacaaaa 24571335  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||| ||| ||| || |||||||| ||||||||||    
T  24571336 agttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaaca 24571434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 34026629 - 34026820
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| |||||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  34026629 tttttatggtattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 34026721  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    | |||||  ||| ||| ||||||||||||||| |  ||||||||||| ||  ||| || | ||||||||| | ||| || |||||||| ||||||||||    
T  34026722 aattgtgttgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctatacctgaaacagttttacaaatcaaaca 34026820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 63 - 250
Target Start/End: Original strand, 29584847 - 29585028
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    ||||| |||||| || | |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       ||||||||||||||  |    
T  29584847 attgagtaattttttattttatacgatttttgaaggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaaagttgtgttg 29584939  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    || ||| ||||||||||||||| |  ||||||||| | ||| ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  29584940 tggtttggtgagggacaaaaatatgagtttttgtcctgtcacttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 29585028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 48 - 250
Target Start/End: Original strand, 29646022 - 29646219
Alignment:
Q  48 acaagtttttacggtattgaataatttgtt-gtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatag 146  Q
    |||| |||||| || ||| |||||||| || || ||||||||||||| | |||||||| | ||| || |||||||| ||||||||||||| |       |    
T  29646022 acaaatttttatggcattaaataatttttttgttttatacgatttttgggggacaaaatgctattttggtattttaaacaacttgtacgtgg-------g 29646114  T
Q  147 acaaaaagttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatc 245  Q
    |||||||||||||  ||| ||| ||||||||||||||| | |||||||||| ||||  ||| || | |||| || ||| |||||| |||||||| |||||    
T  29646115 acaaaaagttgtgatgtggtttggtgagggacaaaaatatatgtttttgtcctatcccttgcctccagtttatcgtgtacctaaaacagttttacaaatc 29646214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 63 - 266
Target Start/End: Complemental strand, 33364891 - 33364694
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    |||||||||||| |||| ||||||||||||| | |||||||| | ||| ||  |||||||||||||||||||||        |||||||||||||||  |    
T  33364891 attgaataattttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgt-------gagacaaaaagttgtgatg 33364799  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaacaatatacaactg 261  Q
    || |||  |||||| ||||||| || ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| |||| ||||| |  |||||||    
T  33364798 tggtttgctgaggggcaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaataaaacactggacaactg 33364699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 184
Target Start/End: Complemental strand, 1344830 - 1344706
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || ||||||||||||||||||||||        ||||||||    
T  1344830 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgt-------gagacaaaa 1344738  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat 184  Q
    |||||||| ||| ||| |||||||||||||||    
T  1344737 agttgtgctgtggtttggtgagggacaaaaat 1344706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 12349294 - 12349103
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||| ||    
T  12349294 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacataa 12349202  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||| ||| ||||| ||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  12349201 agttgtgctgtggtttggtgagagacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 12349103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 69 - 250
Target Start/End: Complemental strand, 25860528 - 25860353
Alignment:
Q  69 taatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcagtgattt 168  Q
    |||||| |||| ||||||||||||| | | |||||| | ||| |  ||||||||||||||||||||||        |||||||||||||||  ||| |||    
T  25860528 taattttttgttttatacgatttttggagaacaaaatgctatttcggtattttagacaacttgtacgtg-------agacaaaaagttgtgatgtggttt 25860436  T
Q  169 agtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
     ||||||||||||||| |  ||||||||||| ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  25860435 ggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 25860353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 34351483 - 34351411
Alignment:
Q  61 gtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgta 133  Q
    |||||||||||||| | ||||| |||||||||||||||| |||| ||||| ||  ||||||||||||||||||    
T  34351483 gtattgaataatttatggtcttgtacgattttttgtggataaaatgttattttgatattttagacaacttgta 34351411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 69 - 250
Target Start/End: Complemental strand, 42636510 - 42636335
Alignment:
Q  69 taatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcagtgattt 168  Q
    |||||| |||| ||| |||||||||   |||||||| ||||| || |||||||||||||||||||||| |       ||||||||||||||| ||| |||    
T  42636510 taattttttgttttaaacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgg-------gacaaaaagttgtgctgtggttt 42636418  T
Q  169 agtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
     ||||||||||||||| |  ||||||||  | ||  ||| || | ||||||||| | |||||| |||||||| ||||||||||    
T  42636417 ggtgagggacaaaaatatgagtttttgttctgtcccttgcctccagtttgtcctatacctaaaacagttttacaaatcaaaca 42636335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 54622924 - 54622836
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||| |||||| || |||||||||||| |||| ||||||||||||| | |||| ||| | ||| || ||||||||||||||||||||||    
T  54622924 acaattttttatggcattgaataattttttgttttatacgatttttgggggacgaaatgctattttggtattttagacaacttgtacgt 54622836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 189
Target Start/End: Original strand, 5442253 - 5442382
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || |||||||||||| |||| |||||||||||||   ||| |||| | ||| ||  ||||||||||| ||||||||| |       |||||||    
T  5442253 tttttatggcattgaataattttttgttttatacgatttttgagggataaaatgctattttgatattttagacagcttgtacgtgg-------gacaaaa 5442345  T
Q  153 agttgtgcagtgatttagtgagggacaaaaattctgt 189  Q
    |||||||| ||||||| |||||||||||||| |||||    
T  5442346 agttgtgctgtgatttggtgagggacaaaaactctgt 5442382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 266
Target Start/End: Original strand, 19906809 - 19906931
Alignment:
Q  145 agacaaaaagttgtgcagtgatttagtgagggacaaaaa-ttctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaa 243  Q
    |||||||||||||||| ||| ||| |||||||||||||| ||| ||||||||| | ||  ||| || | |||||| |||||||| || || ||||| |||    
T  19906809 agacaaaaagttgtgctgtggtttggtgagggacaaaaatttcagtttttgtcctgtcccttgcctccagtttgttctgtccctgaaacaattttacaaa 19906908  T
Q  244 tcaaacaatatacaactgaagtt 266  Q
    ||||||| |  ||||||||||||    
T  19906909 tcaaacactggacaactgaagtt 19906931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 250
Target Start/End: Complemental strand, 20609761 - 20609580
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    ||||| |||||| ||||  ||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       ||||||||||||||| |    
T  20609761 attgagtaattttttgttatatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaaagttgtgctg 20609669  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    || ||| ||||||||||||||| |  ||||||||| | ||  ||| |  | ||||||||||| ||| || |||||||| ||||||||||    
T  20609668 tggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgccaccagtttgtcctgtacctgaaacagttttacaaatcaaaca 20609580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 48 - 250
Target Start/End: Complemental strand, 51925336 - 51925140
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaataga 147  Q
    |||| |||||| || |||||||||||| |||| ||||||||||||| | |||| ||| ||||| || |||||  | ||||||||||||| |       ||    
T  51925336 acaaatttttatggcattgaataattttttgttttatacgatttttgggggacgaaatgttattttggtattaaaaacaacttgtacgtgg-------ga 51925244  T
Q  148 caaaaagttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatca 246  Q
    ||||||||||||  ||| ||| ||||||||||||||| || ||||||||| | ||  ||| || | ||||||| ||| ||| || |||||||| |||| |    
T  51925243 caaaaagttgtgttgtggtttggtgagggacaaaaatatcagtttttgtcctgtcctttgcctccagtttgtcatgtacctgaaacagttttacaaatta 51925144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 4851579 - 4851496
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || ||||||||||||||||||||||    
T  4851579 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgt 4851496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 89 - 198
Target Start/End: Complemental strand, 14155547 - 14155445
Alignment:
Q  89 ttttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcagtgatttagtgagggacaaaaattctg 188  Q
    ||||||||||||||||| |||| ||  ||||||||||||||||||| |        |||||||||||||||   ||||||||||||||| |||| ||| |    
T  14155547 ttttttgtggacaaaagattattttgatattttagacaacttgtacttg-------agacaaaaagttgtgttatgatttagtgagggataaaatttcag 14155455  T
Q  189 tttttgtcat 198  Q
    ||||||||||    
T  14155454 tttttgtcat 14155445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 26282510 - 26282427
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| || |||||||||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||| |||||    
T  26282510 tttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttatacgt 26282427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 38213332 - 38213399
Alignment:
Q  69 taatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| |||| ||||||||||||| | |||||||| | ||| || ||||||||||||||||||||||    
T  38213332 taattttttgttttatacgatttttgggggacaaaatggtattttggtattttagacaacttgtacgt 38213399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 63 - 184
Target Start/End: Complemental strand, 47958545 - 47958431
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       ||||||||||||||| |    
T  47958545 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaaagttgtgctg 47958453  T
Q  163 tgatttagtgagggacaaaaat 184  Q
    |  ||| |||||||||||||||    
T  47958452 tagtttggtgagggacaaaaat 47958431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 133
Target Start/End: Complemental strand, 41695014 - 41694944
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgta 133  Q
    |||||||||||| |||| ||||||||||||| | |||||||| | ||| |  |||||||||||||||||||    
T  41695014 attgaataattttttgttttatacgatttttgggggacaaaatgctatttcagtattttagacaacttgta 41694944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 184
Target Start/End: Complemental strand, 21221483 - 21221359
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||| ||||||   |||||||| | ||| || ||||||||||||||||||||||        ||||||||    
T  21221483 tttttatggcattgagtaattttttgttttatacaatttttgagggacaaaatgctattttggtattttagacaacttgtacgt-------gagacaaaa 21221391  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat 184  Q
    |||||||  ||| ||| |||||||||||||||    
T  21221390 agttgtgttgtggtttggtgagggacaaaaat 21221359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 266
Target Start/End: Original strand, 21373888 - 21374099
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaataga 147  Q
    |||| |||||| || |||||||||||| || | ||||||||||||| |  ||  ||| | ||| || |||||||||||||||||||||| |       ||    
T  21373888 acaaatttttatggcattgaataattt-ttattttatacgatttttggccgaagaaatgctattttggtattttagacaacttgtacgtgg-------ga 21373979  T
Q  148 caaaaagttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatca 246  Q
    ||||||||||||  ||| ||| ||||||||||||||| |  | ||||||| | ||  ||| ||   ||||||||||| ||| || |||||||| ||||||    
T  21373980 caaaaagttgtgttgtggtttggtgagggacaaaaatatgagattttgtcctgtcccttgcctcaagtttgtcctgtacctgaaacagttttacaaatca 21374079  T
Q  247 aacaatatacaactgaagtt 266  Q
    |||| || ||||||||||||    
T  21374080 aacactagacaactgaagtt 21374099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 3864797 - 3864607
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| ||||| ||||||| | |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  3864797 tttttatggcattgagtaattttttgttttatatgatttttgg-ggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 3864706  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||  ||| ||| | ||||||||||||| |  ||||||||| | ||  ||| || | ||||||| ||| ||| || |||||||| ||||||||||    
T  3864705 agttgtgttgtggtttggcgagggacaaaaatatgagtttttgtcctgtcctttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaaca 3864607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 133
Target Start/End: Original strand, 20255007 - 20255087
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgta 133  Q
    |||||| || ||||| |||||| |||| ||||| |||||||   |||||||| ||||| || |||||||||||||||||||    
T  20255007 tttttatggcattgagtaattttttgttttataagatttttgagggacaaaatgttattttggtattttagacaacttgta 20255087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 54 - 138
Target Start/End: Complemental strand, 28625041 - 28624958
Alignment:
Q  54 ttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtag 138  Q
    ||||| ||||||||||||||| |||||||||| ||||||| || ||| |||  | || ||||||||||||| ||||| |||||||    
T  28625041 ttttatggtattgaataattttttgtcttataagatttttggtagactaaa-atgatttttgtattttagataacttatacgtag 28624958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 30258835 - 30258887
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaag 105  Q
    |||||| |||||| |||||||| | ||||||||||||||||||| ||||||||    
T  30258835 tttttatggtattcaataatttttggtcttatacgattttttgtagacaaaag 30258887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 3695415 - 3695332
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| || ||||| ||||||||||| |||||| |||||| | ||| ||||   ||| || ||||||||||||||||||||||    
T  3695415 tttttatggcattgagtaatttgttgttttatacaatttttgggggataaaatactattttggtattttagacaacttgtacgt 3695332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 130
Target Start/End: Original strand, 25395594 - 25395653
Alignment:
Q  71 atttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaactt 130  Q
    |||| |||| ||||||||||||| ||| |||||| ||||| || ||||||||||||||||    
T  25395594 attttttgttttatacgatttttagtgaacaaaatgttattttggtattttagacaactt 25395653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 25927450 - 25927367
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| || ||||| | |||| |||| |||||||||||||   | |||||| ||||| || ||||||||||||||||||||||    
T  25927450 tttttatggcattgagtgattttttgttttatacgatttttgaggaacaaaatgttattttggtattttagacaacttgtacgt 25927367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 63 - 136
Target Start/End: Original strand, 10747189 - 10747263
Alignment:
Q  63 attgaataatttgttgtcttatacgattttt-tgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||||||||| |||| |||||||||||||  | |||||||| | ||| ||  |||||||||||||||||||||    
T  10747189 attgaataattttttgttttatacgatttttggggggacaaaatgctattttgatattttagacaacttgtacgt 10747263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 6179394 - 6179467
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagaca 126  Q
    |||||| |||||||||||||||  | | ||||| |||||||||  ||| ||| ||||| |||||||||||||||    
T  6179394 tttttatggtattgaataattttctttattatatgattttttggtgacgaaatgttatttttgtattttagaca 6179467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 22484871 - 22484783
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||| |||||| |||||||||||||||  ||| |||||  |||||| |  ||| ||| | ||| ||||||||||||||||||| |||||    
T  22484871 acaaatttttatggtattgaataattttctgtattatataatttttgggtgacgaaatgctatttttgtattttagacaacttatacgt 22484783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 62 - 134
Target Start/End: Original strand, 32621840 - 32621912
Alignment:
Q  62 tattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtac 134  Q
    ||||||||||||| ||||  ||||| ||||||  ||||||| |  |||| || ||||||||||||||||||||    
T  32621840 tattgaataattttttgttgtatacaatttttgatggacaacatattattttggtattttagacaacttgtac 32621912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 42035800 - 42035720
Alignment:
Q  54 ttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtac 134  Q
    ||||| ||||||||| ||||| || |||||||| || |||||||||||||| | | | ||  ||||||| |||||||||||    
T  42035800 ttttatggtattgaacaattttttctcttatactatgttttgtggacaaaatgctgttttgctattttacacaacttgtac 42035720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 1e-21; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 48 - 250
Target Start/End: Complemental strand, 6029510 - 6029314
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaataga 147  Q
    |||| |||||| ||||||||||||||| |||| ||||| | ||||| | |||| ||| ||||| || || ||||||||||||||||||| |       ||    
T  6029510 acaaatttttatggtattgaataatttcttgttttatatgctttttgggggacgaaatgttattttggtgttttagacaacttgtacgtgg-------ga 6029418  T
Q  148 caaaaagttgtgcagtgatttagtgagggacaaaaa-ttctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatca 246  Q
    ||||||||||||  ||| ||| |||||||||||||| ||| ||||||||| | ||  ||| |||| |||||| |||||||| || |||||||| ||||||    
T  6029417 caaaaagttgtgttgtggtttggtgagggacaaaaatttcagtttttgtcctgtcccttgccttcagtttgttctgtccctgaaacagttttacaaatca 6029318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 63 - 273
Target Start/End: Original strand, 39281874 - 39282078
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    ||||||||||||  ||| ||||||||||||| | |||| ||| ||||| || ||||||||||||||||||||||||       ||||||||||||| | |    
T  39281874 attgaataattttatgttttatacgatttttggaggacgaaatgttattttggtattttagacaacttgtacgtag-------gacaaaaagttgtactg 39281966  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaacaatatacaactg 261  Q
    || ||| ||||||||||||||| |  ||||||||| | ||  |||  |   ||||||||||| ||| || |||||||| |||||||||| |  |||||||    
T  39281967 tggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcatctagtttgtcctgtaccttaaacagttttacaaatcaaacactgaacaactg 39282066  T
Q  262 aagttatcttgt 273  Q
    ||||||||||||    
T  39282067 aagttatcttgt 39282078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 26118419 - 26118228
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || |||||||||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||| ||||| |       |||||||    
T  26118419 tttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttttacgtgg-------gacaaaa 26118327  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||||||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  26118326 agttgtgctgtgatttggtgagggacaaaaatatgagtttttgtcctgtcctttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 26118228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 42510495 - 42510686
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || |||||||||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  42510495 tttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 42510587  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||| ||| ||||| ||||||||| |  ||||||||| | ||  |||||| | ||||||||||| ||| || ||||||||  |||||||||    
T  42510588 agttgtgctgtggtttggtgagagacaaaaatatgagtttttgtcctgtcccttgtctccagtttgtcctgtacctgaaacagttttacgaatcaaaca 42510686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 48 - 137
Target Start/End: Complemental strand, 15540099 - 15540010
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgta 137  Q
    ||||||||||| ||||||||||||||| |||| ||||| ||||||| | |||||||| ||||| || || ||||||||||||| ||||||    
T  15540099 acaagtttttatggtattgaataattttttgttttatatgatttttgggggacaaaatgttattttggtgttttagacaacttctacgta 15540010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 844928 - 844737
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  844928 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 844836  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| ||   ||||||||||| ||| || |||||||| ||||||||||    
T  844835 agttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaaca 844737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 63 - 266
Target Start/End: Complemental strand, 42512964 - 42512767
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    |||||||||||| |||| ||||||||||||| | ||||||||   ||| ||  |||||||||||| ||||||||||       ||||||||||||||  |    
T  42512964 attgaataattttttgttttatacgatttttgggggacaaaattctattttgatattttagacaatttgtacgtag-------gacaaaaagttgtgttg 42512872  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaacaatatacaactg 261  Q
    || |||  ||||| |||||||| || ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| |||||||||| |  |||||||    
T  42512871 tggtttgctgaggcacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactg 42512772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 63 - 250
Target Start/End: Complemental strand, 45491069 - 45490888
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       ||||||||||||||  |    
T  45491069 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaaagttgtgttg 45490977  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    || ||| ||||||||||||||| |  ||||||||||| ||  ||| || | ||||||||||| | | || |||||||| ||||||||||    
T  45490976 tggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtacttgaaacagttttacaaatcaaaca 45490888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 250
Target Start/End: Complemental strand, 17327842 - 17327662
Alignment:
Q  64 ttgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcagt 163  Q
    |||| ||||||||||| ||||||||||||| | ||||||||  |||| || |||||||||| || |||||| |        |||||||||||||||| ||    
T  17327842 ttgagtaatttgttgttttatacgatttttgggggacaaaatattattttggtattttagataatttgtacatg-------agacaaaaagttgtgctgt 17327750  T
Q  164 gatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    ||||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| |||| |||||    
T  17327749 gatttggtgagggacaaaaatatgagtttttgtcctgtcccttgactccagtttgtcctgtacctgaaacagttttacaaattaaaca 17327662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 17887917 - 17888109
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtgg-acaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaa 151  Q
    |||||| || ||||| ||||||||||| ||||||||||||| | || |||||| ||||| || |||||||||||||||||||||| |       ||||||    
T  17887917 tttttatggcattgagtaatttgttgttttatacgatttttggggggacaaaatgttattttggtattttagacaacttgtacgtgg-------gacaaa 17888009  T
Q  152 aagttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    ||||||||  ||| ||| | ||||||||||||| |  ||||||||| | ||  ||| || | ||||||| ||| ||| || |||||||| ||||||||||    
T  17888010 aagttgtgttgtggtttggcgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaaca 17888109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 266
Target Start/End: Original strand, 31004097 - 31004309
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaataga 147  Q
    |||| |||||| || |||||||||||| |||| ||||| ||||||| | |||| |||   ||| || |||||||||||||||||||||| |       ||    
T  31004097 acaaatttttatggcattgaataattttttgttttataggatttttgggggacgaaatactattttggtattttagacaacttgtacgtgg-------ga 31004189  T
Q  148 caaaaagttgtgcagtgatttagtgagggacaaaaa-ttctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatca 246  Q
    ||||||||||||  ||| ||| ||||||||||||||  || ||||||||| | ||   || || | ||||||||||| ||| || |||||||| ||||||    
T  31004190 caaaaagttgtgttgtggtttggtgagggacaaaaacatcagtttttgtcctgtcccgtgcctccagtttgtcctgtacctgaaacagttttacaaatca 31004289  T
Q  247 aacaatatacaactgaagtt 266  Q
    |||| |  ||||||||||||    
T  31004290 aacactggacaactgaagtt 31004309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 16386824 - 16387015
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  16386824 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 16386916  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||  ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| ||   ||||||||||| ||| || |||||||| ||||||||||    
T  16386917 agttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaaca 16387015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 28340507 - 28340316
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || ||||||||||||||||||||||        ||||||||    
T  28340507 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgt-------gagacaaaa 28340415  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||| |||  |||||||||||||| |  ||||||||| | ||  ||| || | ||||||| ||| ||| || |||||||| ||||||||||    
T  28340414 agttgtgctgtggtttgatgagggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaaca 28340316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 35387515 - 35387324
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   ||| |||| | ||| || |||||||||||||||||||||| ||       ||||||    
T  35387515 tttttatggcattgagtaattttttgttttatacgatttttgagggataaaatgctattttggtattttagacaacttgtacgtgga-------acaaaa 35387423  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||| ||| ||||||||||||||| |  ||||||||| | ||  ||  || | ||||||||||| ||| || |||||||| ||||||||||    
T  35387422 agttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttacctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 35387324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 54 - 138
Target Start/End: Complemental strand, 49303556 - 49303473
Alignment:
Q  54 ttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtag 138  Q
    |||||||  ||||| |||||| |||| ||||||||||||| | |||||||| ||||| || ||||||||||||||||||||||||    
T  49303556 ttttacgtcattgagtaattttttgttttatacgatttttgg-ggacaaaatgttattttagtattttagacaacttgtacgtag 49303473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 50540314 - 50540505
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| ||||||||||| ||||| ||||||| | |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  50540314 tttttatggcattgagtaatttgttgttttatatgatttttgggggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 50540406  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||  ||| |||  ||| |||||||||| |  |||| |||| | ||  ||| || | ||||||||||| |||||| |||||||| ||||||||||    
T  50540407 agttgtgttgtggtttgatgaaggacaaaaatatgagtttatgtcctgtcccttgcctccagtttgtcctgtacctaaaacagttttacaaatcaaaca 50540505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 51264465 - 51264656
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||| ||||||||||||| |       |||||||    
T  51264465 tttttatggcattgagtaattttttgttttatacgatttttaaaggacaaaatgctattttagtattttaaacaacttgtacgtgg-------gacaaaa 51264557  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||  ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  51264558 agttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 51264656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 184
Target Start/End: Complemental strand, 16476349 - 16476235
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    ||||||||||||  ||| |||||| |||||| | |||||||| | ||| || |||||||||||||||||||||| |       ||||||||||||||| |    
T  16476349 attgaataattttatgttttatacaatttttgggggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaaagttgtgccg 16476257  T
Q  163 tgatttagtgagggacaaaaat 184  Q
    || ||| |||||||||||||||    
T  16476256 tggtttggtgagggacaaaaat 16476235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 184
Target Start/End: Original strand, 38663112 - 38663226
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    |||||||||||| |||| |||||||||||||   |||||||| ||||| ||  ||||||||||||||||||||| |       ||||||||||||||| |    
T  38663112 attgaataattttttgttttatacgatttttgagggacaaaatgttattttgatattttagacaacttgtacgtgg-------gacaaaaagttgtgctg 38663204  T
Q  163 tgatttagtgagggacaaaaat 184  Q
    || |||  ||||||||||||||    
T  38663205 tggtttgctgagggacaaaaat 38663226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 50382607 - 50382524
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| ||||||||||||| | |||| ||||| |||||||   |||||||| ||||| ||||| |||||||||||||||||||    
T  50382607 tttttatggtattgaataatattttgttttatatgatttttgagggacaaaatgttatttttgtgttttagacaacttgtacgt 50382524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 268
Target Start/End: Original strand, 7183888 - 7184097
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||    |||||||   |||||| ||||||||||||||||||||||||       |||||||    
T  7183888 tttttatggcattgagtaattttttgttttatacgatttttgagagacaaaatactatattggtattttagacaacttgtacgtag-------gacaaaa 7183980  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaacaa 251  Q
    |||||||  ||| ||| || |||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| | ||||||||     
T  7183981 agttgtgttgtggtttggtaagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacatatcaaacac 7184080  T
Q  252 tatacaactgaagttat 268  Q
    |  |||||| |||||||    
T  7184081 tggacaactaaagttat 7184097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 136
Target Start/End: Original strand, 33316389 - 33316470
Alignment:
Q  54 ttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    ||||||||||||||||||||  | | ||||||||| |||||||||| |||| | ||| |||||| ||||||||||||||||||    
T  33316389 ttttacggtattgaataattcttggccttatacgactttttgtgga-aaaatgctatttttgtaatttagacaacttgtacgt 33316470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 52030408 - 52030330
Alignment:
Q  54 ttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgt 132  Q
    |||||||||||||||| |||| ||||  |||| ||||||||||||||||||   ||| ||||||||||||| |||||||    
T  52030408 ttttacggtattgaatcattttttgttatatatgattttttgtggacaaaaaactatttttgtattttagataacttgt 52030330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 53 - 138
Target Start/End: Complemental strand, 32468025 - 32467940
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtag 138  Q
    |||||| |||||||| |||||| |||||||||| ||||||||||| ||||||   ||| ||  |||| ||||||||||||||||||    
T  32468025 tttttatggtattgactaattttttgtcttatatgattttttgtgaacaaaaaactattttgatattgtagacaacttgtacgtag 32467940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 6144195 - 6144107
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||| |||||| |||||||||||||||  ||| ||||| ||||||| |  ||||||| ||||| ||||| ||||||||||||| |||||    
T  6144195 acaaatttttatggtattgaataattttctgttttatatgatttttgggtgacaaaatgttatttttgtgttttagacaacttctacgt 6144107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 6711250 - 6711059
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  6711250 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 6711158  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    | |||||  ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| ||   ||||||||||| ||| || |||||||| ||||||||||    
T  6711157 aattgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaaca 6711059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 16451097 - 16451288
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || ||||||||||||||||||| || |       |||||||    
T  16451097 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtatgtgg-------gacaaaa 16451189  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||  ||| ||| ||||| ||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  16451190 agttgtgttgtggtttggtgagagacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 16451288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 250
Target Start/End: Complemental strand, 30105868 - 30105693
Alignment:
Q  69 taatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcagtgattt 168  Q
    |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       ||||||||||| ||| ||| |||    
T  30105868 taattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaaagttatgctgtggttt 30105776  T
Q  169 agtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
     ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||| | ||| || |||||||| ||||||||||    
T  30105775 ggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctttacctgaaacagttttacaaatcaaaca 30105693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 250
Target Start/End: Original strand, 41972898 - 41973072
Alignment:
Q  69 taatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcagtgattt 168  Q
    |||||| |||| ||||||||||||  | |||||||| ||||| || ||||||||||||||||||||||        ||||||||||||||   ||| |||    
T  41972898 taattttttgttttatacgattttgag-ggacaaaatgttattttggtattttagacaacttgtacgt-------gagacaaaaagttgtagtgtggttt 41972989  T
Q  169 agtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
     ||||||||||||||| |  ||||||||||| ||  ||| || | |||||||||||  || || |||||||| ||||||||||    
T  41972990 ggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtatctgaaacagttttacaaatcaaaca 41973072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 47093037 - 47092977
Alignment:
Q  62 tattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtatttta 122  Q
    ||||||||||||| ||| |||||||||||||||||| ||||||  |||| |||||||||||    
T  47093037 tattgaataattttttgccttatacgattttttgtgaacaaaaaattatttttgtatttta 47092977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 69 - 250
Target Start/End: Original strand, 1601159 - 1601332
Alignment:
Q  69 taatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcagtgattt 168  Q
    |||||| |||| || |||||||||| |||||||||| | ||| || ||||||||||||||||||| || |       ||||||||||||||  ||| |||    
T  1601159 taattttttgttttgtacgatttttggtggacaaaatgctattttggtattttagacaacttgtatgtgg-------gacaaaaagttgtgttgtggttt 1601251  T
Q  169 agtgagggacaaaaattctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
     |||||||||||||| |  ||||||||  ||||  ||| || | ||||||||||| ||| || | |||||| ||||||||||    
T  1601252 ggtgagggacaaaaa-tgagtttttgttctatcccttgcctccagtttgtcctgtacctgaaaccgttttacaaatcaaaca 1601332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 16437327 - 16437456
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaataga 147  Q
    |||| |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| ||  ||||||||||||||||||||| |       ||    
T  16437327 acaaatttttatggcattgagtaattttttgttttatacgatttttgaaggacaaaatgctattttgatattttagacaacttgtacgtgg-------ga 16437419  T
Q  148 caaaaagttgtgcagtgatttagtgagggacaaaaat 184  Q
    ||||||||||||  ||| ||| |||||||||||||||    
T  16437420 caaaaagttgtgttgtggtttggtgagggacaaaaat 16437456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 133
Target Start/End: Original strand, 46154880 - 46154950
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgta 133  Q
    |||||||||||| |||| ||||| |||||||   |||||||| ||||| || |||||||||||||||||||    
T  46154880 attgaataattttttgttttataagatttttgaaggacaaaatgttattttggtattttagacaacttgta 46154950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 250
Target Start/End: Original strand, 50304631 - 50304812
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    |||||||||||| |||| ||||||||||||| | |||||||| | ||| ||  |||||||||||||||  ||||        |||||||||||||||| |    
T  50304631 attgaataattttttgttttatacgatttttggaggacaaaatgctattttgatattttagacaacttaaacgt-------gagacaaaaagttgtgctg 50304723  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    || |||   ||||||||||||| || ||||||||| | |   ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  50304724 tggtttgcagagggacaaaaatatcagtttttgtcttgtttcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 50304812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 184
Target Start/End: Original strand, 12890208 - 12890332
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||| ||||||||||||||||| |       |||||||    
T  12890208 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtatcttagacaacttgtacgtgg-------gacaaaa 12890300  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat 184  Q
    |||||||| ||| |||  ||||||||||||||    
T  12890301 agttgtgctgtggtttgatgagggacaaaaat 12890332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 32270323 - 32270514
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| ||||| |||||||   |||||||| | ||| ||  ||||||||||||||||||| | |       |||||||    
T  32270323 tttttatggcattgagtaattttttgttttatatgatttttgagggacaaaatgctattttgatattttagacaacttgtacatgg-------gacaaaa 32270415  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||| | ||| || |||||||| ||||||||||    
T  32270416 agttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctctacctgaaacagttttacaaatcaaaca 32270514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 198
Target Start/End: Original strand, 570356 - 570497
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| |||| |||||| ||| || |||||||| |||||| ||||| |||| ||||| ||  ||||||||||||||| ||||         ||||||||    
T  570356 tttttatggtactgaatacttttttatcttatacaatttttggtggaaaaaatgttattttgatattttagacaacttatacg-------cgagacaaaa 570448  T
Q  153 agttgtgca--gtgatttagtgagggacaaaaa-ttctgtttttgtcat 198  Q
    |||||||||  ||| ||| |||||||||||||| |||||||||| ||||    
T  570449 agttgtgcattgtggtttggtgagggacaaaaatttctgtttttatcat 570497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 4895371 - 4895434
Alignment:
Q  61 gtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttaga 124  Q
    ||||||||||| || | |||||||||||||||| ||| ||||||  |||| |||||||||||||    
T  4895371 gtattgaataagttttagtcttatacgatttttggtgaacaaaaaattatttttgtattttaga 4895434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 16704713 - 16704776
Alignment:
Q  70 aatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgta 133  Q
    ||||| |||| ||||||||||||| | |||||||| | ||| || |||||||||||||||||||    
T  16704713 aattttttgttttatacgatttttggaggacaaaaagctattttggtattttagacaacttgta 16704776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 41968037 - 41967970
Alignment:
Q  69 taatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| |||| |||||| |||||| |  ||||||||| ||| || ||||||||||||||||||||||    
T  41968037 taattttttgttttatacaatttttgggagacaaaaggctattttggtattttagacaacttgtacgt 41967970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 20495085 - 20495012
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    ||||| |||||| |||| |||||| ||||||   |||||||| | ||| || ||||||||||||||||||||||    
T  20495085 attgagtaattttttgttttatactatttttgagggacaaaatgctattttggtattttagacaacttgtacgt 20495012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 266
Target Start/End: Original strand, 45658877 - 45658998
Alignment:
Q  146 gacaaaaagttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaat 244  Q
    ||||||||||||||  ||| ||| ||||| ||||||||| || ||||||||| | ||  |||||| | ||||||||||| | | || |||||||| ||||    
T  45658877 gacaaaaagttgtgttgtggtttggtgagcgacaaaaatatcagtttttgtcttgtcctttgtctccagtttgtcctgtacttgaaacagttttacaaat 45658976  T
Q  245 caaacaatatacaactgaagtt 266  Q
    || ||| || ||||||| ||||    
T  45658977 cagacactagacaactggagtt 45658998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 24339841 - 24339760
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| || |||||||||||| |||| ||||||||| ||| | ||||||   | ||| || ||||||||||||||||||||||    
T  24339841 tttttatggcattgaataattttttgttttatacgatgtttgggggacaat--gctattttggtattttagacaacttgtacgt 24339760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 62 - 102
Target Start/End: Complemental strand, 30798886 - 30798846
Alignment:
Q  62 tattgaataatttgttgtcttatacgattttttgtggacaa 102  Q
    ||||||||||||| | |||||||||||||||| ||||||||    
T  30798886 tattgaataatttttggtcttatacgatttttggtggacaa 30798846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 62 - 133
Target Start/End: Original strand, 31574332 - 31574404
Alignment:
Q  62 tattgaataatttgttgtcttatacgattttttgtggac-aaaaggttatatttgtattttagacaacttgta 133  Q
    ||||||||||||| |||| |||| ||||||||||| ||| ||||   ||| ||||||||||| ||||||||||    
T  31574332 tattgaataattttttgttttatgcgattttttgtagactaaaaaactatttttgtattttaaacaacttgta 31574404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 49799356 - 49799424
Alignment:
Q  62 tattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaactt 130  Q
    ||||||||||| | | ||||||| | ||||||| ||||||||||  ||| || ||||||||||||||||    
T  49799356 tattgaataatatttggtcttattcaattttttatggacaaaagtctattttggtattttagacaactt 49799424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 53 - 133
Target Start/End: Complemental strand, 51703366 - 51703287
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgta 133  Q
    |||||| || ||||| |||||| |||| |||||| |||||  | |||||||| ||||| ||||||||||||||||| ||||    
T  51703366 tttttatggcattgagtaattttttgttttataccattttgag-ggacaaaatgttatttttgtattttagacaacatgta 51703287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 5e-21; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 40753120 - 40753311
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  40753120 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 40753212  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||||||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  40753213 agttgtgctgtgatttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 40753311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 47953155 - 47953346
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  47953155 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 47953247  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||| ||| ||||||||||||||| |  ||||||||||| ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  47953248 agttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 47953346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 48 - 250
Target Start/End: Original strand, 329430 - 329626
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaataga 147  Q
    |||| |||||| ||||||||||||||| |||| ||||| ||||||| | |||||||| | ||| || || |||||| |||||||||||| |       ||    
T  329430 acaaatttttatggtattgaataatttcttgttttatatgatttttgggggacaaaatgctattttggtgttttaggcaacttgtacgtgg-------ga 329522  T
Q  148 caaaaagttgtgcagtgatttagtgagggacaaaaa-ttctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatca 246  Q
    ||||||||||||  ||| ||| |||||||||||||| ||| ||||||||| | ||  ||| || | |||||| |||||||| || |||||||| ||||||    
T  329523 caaaaagttgtgatgtggtttggtgagggacaaaaatttcagtttttgtcttgtcctttgcctccagtttgttctgtccctgaaacagttttacaaatca 329622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 53 - 184
Target Start/End: Complemental strand, 26371939 - 26371815
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || |||||||||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  26371939 tttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgctattttagtattttagacaacttgtacgtgg-------gacaaaa 26371847  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat 184  Q
    |||||||| ||||||| |||||||||||||||    
T  26371846 agttgtgctgtgatttggtgagggacaaaaat 26371815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 48 - 250
Target Start/End: Original strand, 48445481 - 48445677
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaataga 147  Q
    |||| |||||| ||||||||||||||| |||| ||||| ||||||| | |||||||| ||||| || || |||||||||||||||| |         |||    
T  48445481 acaaatttttatggtattgaataatttcttgttttatatgatttttgggggacaaaatgttattttcgtgttttagacaacttgtatg-------cgaga 48445573  T
Q  148 caaaaagttgtgcagtgatttagtgagggacaaaaa-ttctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatca 246  Q
    ||||||||||| | ||||||| |||| ||||||||| ||| ||||||||||| ||  ||| || | |||||| |||||||| || |||||||| |||| |    
T  48445574 caaaaagttgtcctgtgatttggtgaaggacaaaaatttcagtttttgtcatgtcccttgcctccagtttgttctgtccctcaaacagttttacaaatta 48445673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 11322015 - 11321824
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  11322015 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 11321923  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  11321922 agttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtccgttgcctccagtttgtcctgtacctgaatcagttttacaaatcaaaca 11321824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 53 - 184
Target Start/End: Complemental strand, 26994355 - 26994231
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| ||||||||||||||  |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  26994355 tttttatggcattgagtaattttttgttttatacgattttttagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 26994263  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat 184  Q
    |||||||| ||| ||| |||||||||||||||    
T  26994262 agttgtgctgtggtttggtgagggacaaaaat 26994231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 60 - 249
Target Start/End: Complemental strand, 22724654 - 22724471
Alignment:
Q  60 ggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtg 159  Q
    |||||||||||||||  ||| ||||| ||||||| |  ||| ||| | ||| ||||||||||||||||||||||||| |       |||| ||||||| |    
T  22724654 ggtattgaataattttctgtattatatgatttttgggcgacgaaatgctatttttgtattttagacaacttgtacgtgg-------gacataaagttgcg 22724562  T
Q  160 cagtgatttagtgagggacaaaaatt-ctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaac 249  Q
    | ||| ||| |||||||||||||||| | | ||||||||||||  ||| || | ||||||||||||||| || | |||||| |||||||||    
T  22724561 ctgtggtttggtgagggacaaaaattgcagcttttgtcatatcccttgcctccagtttgtcctgtccctgaaactgttttacaaatcaaac 22724471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 10932687 - 10932496
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  10932687 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 10932595  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||  ||  ||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  10932594 agttgtgttgtagtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 10932496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 29992813 - 29992742
Alignment:
Q  64 ttgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    ||||||||||| | |||||||||||||||| ||||||||||  |||| ||||||||||||| |||||||||||    
T  29992813 ttgaataatttttggtcttatacgatttttggtggacaaaaaattat-tttgtattttagataacttgtacgt 29992742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 36769699 - 36769508
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||    ||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  36769699 tttttatggcattgagtaattttttgttttatacgatttttgagagacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 36769607  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| ||   ||||||||||| ||| || |||||||| ||||||||||    
T  36769606 agttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaaca 36769508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 48699358 - 48699446
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    ||||| ||||| |||||||||| | || | ||||| |||||||||||||||||| |||  ||| || ||||||||||||||||||||||    
T  48699358 acaagcttttatggtattgaatgacttttggtcttgtacgattttttgtggacataagtctattttggtattttagacaacttgtacgt 48699446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 184
Target Start/End: Original strand, 18386500 - 18386614
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       ||||||||||||||| |    
T  18386500 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaaagttgtgctg 18386592  T
Q  163 tgatttagtgagggacaaaaat 184  Q
    || ||| |||||||||||||||    
T  18386593 tggtttggtgagggacaaaaat 18386614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 250
Target Start/End: Original strand, 21784837 - 21785027
Alignment:
Q  54 ttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaa 153  Q
    ||||| || ||||| ||||||  ||| ||||||||||||| | |||||||| | ||| || |||||||||||||||||||||| |       ||||||||    
T  21784837 ttttatggcattgagtaattttatgttttatacgatttttggaggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaaa 21784929  T
Q  154 gttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    ||||||  ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||| ||| ||| || |||||||| ||||||||||    
T  21784930 gttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtctcttgcctccagtttgtcatgtgcctgaaacagttttacaaatcaaaca 21785027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 184
Target Start/End: Original strand, 26652841 - 26652955
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    |||||||||||| |||| ||||||||||||| | |||||||| | ||| ||  ||||||||||||||||||||| |       ||||||||||||||| |    
T  26652841 attgaataattttttgttttatacgatttttggcggacaaaatgctattttgatattttagacaacttgtacgtgg-------gacaaaaagttgtgctg 26652933  T
Q  163 tgatttagtgagggacaaaaat 184  Q
    || |||  ||||||||||||||    
T  26652934 tggtttgctgagggacaaaaat 26652955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 250
Target Start/End: Original strand, 38301318 - 38301498
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    |||||||||||| |||| | ||||||||||| | |||||||| ||||| ||  ||||||||||||||||| ||| |       ||||||||||||||  |    
T  38301318 attgaataattttttgtttaatacgatttttgggggacaaaatgttattttgatattttagacaacttgt-cgtgg-------gacaaaaagttgtgttg 38301409  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    || |||  |||||||||||||| || ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  38301410 tggtttgctgagggacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 38301498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 15035388 - 15035303
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgta 133  Q
    |||| |||||| ||||||||||||||| |||| || |||||||||| |||| ||||| ||||| ||  |||||||||||| |||||    
T  15035388 acaaatttttatggtattgaataattttttgttttgtacgatttttggtgggcaaaatgttattttgatattttagacaatttgta 15035303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 18470649 - 18470838
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| ||||| |||||||   |||||||| ||||| || |||||||||||||||||||||| |       |||||||    
T  18470649 tttttatggcattgagtaattttttgttttatatgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgg-------gacaaaa 18470741  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||| ||| ||| ||| ||||| ||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  18470742 agttatgctgtggtttggtgagagacaaaaatatgagtttttgtcctgtc--ttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 18470838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 53 - 247
Target Start/End: Complemental strand, 30849376 - 30849188
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| ||||||||||||| | |||||||| ||||| || |||||||| ||||||||||  | |       |||||||    
T  30849376 tttttatggcattgagtaattttttgttttatacgatttttgggggacaaaatgttattttggtattttatacaacttgtatatgg-------gacaaaa 30849284  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaa 247  Q
    |||||||  ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| |  | ||||||||||| |||||| |||||||| |||||||    
T  30849283 agttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgccaccagtttgtcctgtacctaaaacagttttacaaatcaa 30849188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 53 - 184
Target Start/End: Original strand, 46633662 - 46633786
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  46633662 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 46633754  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat 184  Q
    |||||||| ||| ||| |||||||| ||||||    
T  46633755 agttgtgctgtggtttggtgagggataaaaat 46633786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 9913485 - 9913573
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||| |||||| || |||||||||||| | || ||||||||||||| | |||| ||| ||||| || |||||||||||||| |||||||    
T  9913485 acaaatttttatggaattgaataatttttagttttatacgatttttgggggacgaaatgttattttggtattttagacaacctgtacgt 9913573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 9927173 - 9927261
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||| |||||| || |||||||||||| | || ||||||||||||| | |||| ||| ||||| || |||||||||||||| |||||||    
T  9927173 acaaatttttatggaattgaataatttttagttttatacgatttttgggggacgaaatgttattttggtattttagacaacctgtacgt 9927261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 21408421 - 21408345
Alignment:
Q  62 tattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtag 138  Q
    ||||||||||||  ||||||||||| ||||||  ||||||||||||| | || |||||||| ||||||| |||||||    
T  21408421 tattgaataattctttgtcttatacaatttttgatggacaaaaggttcttttcgtattttaaacaacttatacgtag 21408345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 196
Target Start/End: Complemental strand, 34295524 - 34295397
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    |||||||||||| |||| ||||| ||||||| | |||||||| | ||| ||  ||||||||||||||||||||| |       ||||||||||||||| |    
T  34295524 attgaataattttttgttttatatgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgg-------gacaaaaagttgtgctg 34295432  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtc 196  Q
    || |||  |||||||||||||| || |||||||||    
T  34295431 tggtttgctgagggacaaaaatatcagtttttgtc 34295397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 63 - 134
Target Start/End: Complemental strand, 30599128 - 30599057
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtac 134  Q
    ||||| ||||||||||| ||||||||||||| | |||||||| ||||| || |||||||||| || ||||||    
T  30599128 attgagtaatttgttgttttatacgatttttaggggacaaaatgttattttggtattttagataatttgtac 30599057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 44748676 - 44748743
Alignment:
Q  69 taatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| |||| ||||||||||||| | |||||||| | ||| || ||||||||||||||||||||||    
T  44748676 taattttttgttttatacgatttttgggggacaaaatgctattttggtattttagacaacttgtacgt 44748743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 47947725 - 47947808
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || ||||||||||||||||||||||    
T  47947725 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgt 47947808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 184
Target Start/End: Complemental strand, 41211331 - 41211206
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaag-gttatatttgtattttagacaacttgtacgtagataaatagacaaa 151  Q
    |||||| || ||||| |||||| |||| ||||||||||||||  ||| ||||  | ||| || |||||||||||||||||||||| |       ||||||    
T  41211331 tttttatggcattgagtaattttttgttttatacgattttttagggataaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaa 41211239  T
Q  152 aagttgtgcagtgatttagtgagggacaaaaat 184  Q
    ||||||||| ||| ||| |||||||||||||||    
T  41211238 aagttgtgctgtggtttggtgagggacaaaaat 41211206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 250
Target Start/End: Original strand, 43368176 - 43368357
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    |||||||||||| |||| ||||||||||||    |||||||| | ||| ||  |||||||||||||||||||||||       ||||||||||||||| |    
T  43368176 attgaataattttttgttttatacgattttggagggacaaaatgctattttgatattttagacaacttgtacgtag-------gacaaaaagttgtgctg 43368268  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    || |||  ||||| |||||||| || |||||||||   ||  ||| || | ||||||||| | ||| || |||||||| ||||||||||    
T  43368269 tggtttgctgaggcacaaaaatatcagtttttgtcccgtctcttgcctccagtttgtcctatacctgaaacagttttacaaatcaaaca 43368357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 29372908 - 29372828
Alignment:
Q  54 ttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgta-ttttagacaacttgtac 134  Q
    ||||| |||||| |||||||| | |||||||| ||||||| ||||| ||||||||| ||||| | |||||||||||||||||    
T  29372908 ttttatggtattaaataatttttggtcttatatgatttttggtggataaaaggtta-atttgaaattttagacaacttgtac 29372828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 297
Target Start/End: Original strand, 1363597 - 1363839
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaataga 147  Q
    |||| |||||| || |||||||||||| |||| |||||| |||||| | | || ||| | ||| |||||||||| |||||| |||||||        |||    
T  1363597 acaaatttttatggcattgaataattttttgttttatacaatttttgg-gtacgaaatgctatttttgtatttttgacaacctgtacgtg-------aga 1363688  T
Q  148 caaaaagttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatca 246  Q
    ||||||||||||  ||| |||  |||||||||||||| || | ||||||||| ||  ||| || | ||||||||||| | | || || ||||| ||||||    
T  1363689 caaaaagttgtgatgtggtttgatgagggacaaaaatatcagcttttgtcatgtcccttgcctccagtttgtcctgtacatgaaacaattttacaaatca 1363788  T
Q  247 aacaatatacaactgaagttatcttgtgatctccgttattttttagaaaat 297  Q
    |||| |  |||||||||||| | ||||  | ||| ||||||||||| ||||    
T  1363789 aacactggacaactgaagttgttttgtcctatcctttattttttagcaaat 1363839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 184
Target Start/End: Original strand, 1870109 - 1870224
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtgg-acaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgca 161  Q
    ||||| |||||| |||| ||||||||||||||  || |||||| ||||| ||  ||||||||||||||||||||| |       ||||||||||||||      
T  1870109 attgagtaattttttgttttatacgatttttttagggacaaaatgttattttgatattttagacaacttgtacgtgg-------gacaaaaagttgtgtt 1870201  T
Q  162 gtgatttagtgagggacaaaaat 184  Q
    ||| ||| |||||||||||||||    
T  1870202 gtggtttggtgagggacaaaaat 1870224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 62 - 134
Target Start/End: Complemental strand, 21408746 - 21408675
Alignment:
Q  62 tattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtac 134  Q
    ||||||||||||| || ||||||||||||||| |||||| |||   ||| ||||||||||||| |||||||||    
T  21408746 tattgaataattttttatcttatacgatttttagtggacgaaa-actatttttgtattttagataacttgtac 21408675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 41665710 - 41665622
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||| |||||| |||||||||||||||  ||| |||||  |||||| |  ||| ||| | ||| |||||||||||||||||||||||||    
T  41665710 acaaatttttatggtattgaataattttctgttttatataatttttgggtgacgaaatgctatttttgtattttagacaacttgtacgt 41665622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 22724162 - 22724079
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| |||||||||||||||  ||| ||||| ||||||| |  ||| ||| | ||| ||||||||||| |||||||||||||    
T  22724162 tttttatggtattgaataattttctgtattatatgatttttgggtgacgaaatgctatttttgtattttatacaacttgtacgt 22724079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 184
Target Start/End: Original strand, 29661298 - 29661412
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||| ||||||||||| |       || |||||||||||| |    
T  29661298 attgagtaattttttgttttatacgatttttgtgggacaaaatgctattttggtattttagataacttgtacgtgg-------gataaaaagttgtgctg 29661390  T
Q  163 tgatttagtgagggacaaaaat 184  Q
    || ||| |||||||||||||||    
T  29661391 tggtttggtgagggacaaaaat 29661412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 32873899 - 32873816
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||| |||||||||||||||    
T  32873899 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtatttcagacaacttgtacgt 32873816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 48 - 134
Target Start/End: Original strand, 34117412 - 34117498
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtac 134  Q
    |||| |||||| || |||||||||||| | || ||||||||||||| | |||| ||| | ||| || | ||||||||||||||||||    
T  34117412 acaaatttttatggcattgaataatttttcgttttatacgatttttgggggacgaaatgctattttggcattttagacaacttgtac 34117498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 37966934 - 37967022
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||| |||||| |||||| |||||||| |||| ||||||||||||||  |||| ||| | ||| || |  ||||||| |||||||||||    
T  37966934 acaaatttttatggtattaaataattttttgttttatacgatttttttgggacgaaatgctattttggatttttagataacttgtacgt 37967022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 41903683 - 41903603
Alignment:
Q  54 ttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtac 134  Q
    ||||| ||| ||||| ||||| |||| ||||| ||| ||| |||||||||||  ||| || ||||||||||||| ||||||    
T  41903683 ttttatggtcttgaacaattttttgttttatatgatgtttggtggacaaaagactattttagtattttagacaatttgtac 41903603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 5e-21; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 32528676 - 32528867
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || |||||||||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  32528676 tttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 32528768  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||  ||| ||| ||||||||||||||| |  ||||||||| | ||  |||||| | ||||||||||| ||| || |||||||| ||||||||||    
T  32528769 agttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgtctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 32528867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 63 - 250
Target Start/End: Original strand, 3735328 - 3735509
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    |||||||||||| |||| ||||||||||||| | |||||||| ||||| || |||||||||||||||||||||| |       ||||||||||||||| |    
T  3735328 attgaataattttttgttttatacgatttttggaggacaaaatgttattttggtattttagacaacttgtacgtgg-------gacaaaaagttgtgctg 3735420  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    || ||| |||| |||||||||| || ||||||||| | || |||| || |  |||||| ||| ||| || | |||||| ||||||||||    
T  3735421 tggtttggtgatggacaaaaatatcagtttttgtcctgtccattgcctccattttgtcatgtacctgaaacggttttacaaatcaaaca 3735509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 67 - 258
Target Start/End: Original strand, 17031132 - 17031317
Alignment:
Q  67 aataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcagtgat 166  Q
    |||||||| | |||||||| |||||||||||||||||| | ||| ||||||||||| | ||||||||||| |       ||| ||||||||||| |||||    
T  17031132 aataatttttggtcttatatgattttttgtggacaaaaagctatttttgtattttaaataacttgtacgtgg-------gacgaaaagttgtgctgtgat 17031224  T
Q  167 ttagtgagggacaaaaa-ttctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaacaatatacaa 258  Q
    ||| |||||| |||||| || |||||||||| | ||  ||| || |  ||||| |||||||| || |||||||| |||||||||| |||||||    
T  17031225 ttaatgaggggcaaaaatttatgtttttgtcctgtcctttgcctccaatttgtactgtccctgaaacagttttacaaatcaaacattatacaa 17031317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 48 - 250
Target Start/End: Complemental strand, 18470568 - 18470372
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaataga 147  Q
    |||| |||||| ||||||||||||||| |||| ||||| | ||||| | |||| ||| ||||| || || ||||||||||||||||||| |       ||    
T  18470568 acaaatttttatggtattgaataatttcttgttttatatgctttttgggggacgaaatgttattttggtgttttagacaacttgtacgtgg-------ga 18470476  T
Q  148 caaaaagttgtgcagtgatttagtgagggacaaaaa-ttctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatca 246  Q
     |||||||||||| ||| ||| || ||||||||||| ||| ||||||||| | ||  ||| |||| |||||| |||||||| || |||||||| ||||||    
T  18470475 taaaaagttgtgctgtggtttggtaagggacaaaaatttcagtttttgtcttgtcccttgccttcagtttgttctgtccctgaaacagttttacaaatca 18470376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 2351641 - 2351832
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| || ||||||||||   |||||||| ||||| || |||||||||||||||||||||| |       |||||||    
T  2351641 tttttatggcattgagtaattttttgttttgtacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgg-------gacaaaa 2351733  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||| ||| ||||||||||||||| |  ||||||||| | ||| ||| || | ||||||||| | ||| || |||||||| ||||||||||    
T  2351734 agttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcacttgcctccagtttgtcctataccttaaacagttttacaaatcaaaca 2351832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 53 - 248
Target Start/End: Original strand, 39788153 - 39788343
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggac-aaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaa 151  Q
    |||||| |||||||| |||||| |||| ||||||||||||| | |||| |||| ||||| || |||||||||||||||||||||| |       ||||||    
T  39788153 tttttatggtattgagtaattttttgttttatacgatttttgggggacaaaaatgttattttagtattttagacaacttgtacgtgg-------gacaaa 39788245  T
Q  152 aagttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaa 248  Q
    ||||||||  ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||    
T  39788246 aagttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcctttgcctacagtttgtcctgtacctgaaacagttttacaaatcaaa 39788343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 63 - 250
Target Start/End: Complemental strand, 31880201 - 31880020
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    |||||||||||| |||| |||||||||| || | |||||||| | ||| || ||||||||||||||||||||||||       |||||| |||||||  |    
T  31880201 attgaataattttttgtattatacgattgttgggggacaaaatgctattttggtattttagacaacttgtacgtag-------gacaaatagttgtgatg 31880109  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    || ||| ||||||||||||||| |  ||||||||| | ||| ||| || | ||||||||||| ||| || ||||||||  |||||||||    
T  31880108 tggtttggtgagggacaaaaatatgagtttttgtcctgtcacttgcctccagtttgtcctgtacctgaaacagttttactaatcaaaca 31880020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 53 - 184
Target Start/End: Complemental strand, 4818275 - 4818151
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| ||||||||||||||  |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  4818275 tttttatggcattgagtaattttttgttttatacgattttttagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 4818183  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat 184  Q
    |||||||| ||| ||| |||||||||||||||    
T  4818182 agttgtgctgtggtttggtgagggacaaaaat 4818151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 61 - 184
Target Start/End: Original strand, 39918476 - 39918592
Alignment:
Q  61 gtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgc 160  Q
    ||||||| ||||||  ||| ||||||||||||| | |||||||| ||||| || ||||||||||||||||||||||        ||||||||||||||||    
T  39918476 gtattgagtaattttatgttttatacgatttttgggggacaaaatgttattttggtattttagacaacttgtacgt-------gagacaaaaagttgtgc 39918568  T
Q  161 agtgatttagtgagggacaaaaat 184  Q
     ||| ||| |||||||||||||||    
T  39918569 tgtggtttggtgagggacaaaaat 39918592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 24181759 - 24181568
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| ||||||||||| ||||||||| ||| | |||||||| | ||| || |||||||||||||||| ||||| |       |||||||    
T  24181759 tttttatggcattgagtaatttgttgttttatacgatctttgggggacaaaatgctattttggtattttagacaacttatacgtgg-------gacaaaa 24181667  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||| ||| ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  24181666 agttatgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttggctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 24181568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 250
Target Start/End: Complemental strand, 28090646 - 28090464
Alignment:
Q  62 tattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgca 161  Q
    |||||| |||||| |||| |||||||||||||   |||||||| ||||| ||||||||||||||||||||||||| |       ||||||||||||||      
T  28090646 tattgagtaattttttgttttatacgatttttgagggacaaaatgttatttttgtattttagacaacttgtacgtgg-------gacaaaaagttgtgtt 28090554  T
Q  162 gtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    ||  ||| ||||||||||||||| |  ||||||||||| ||  ||| || | ||||| | ||| ||| || |||||||| ||||||||||    
T  28090553 gtagtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgccttgtacctgaaacagttttacaaatcaaaca 28090464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 63 - 266
Target Start/End: Complemental strand, 4689823 - 4689626
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    |||||||||||| |||| |||||||| |||| | |  | ||| ||||| |||||||||||| |||||||||||| |       ||||||||||||||  |    
T  4689823 attgaataattttttgttttatacgacttttggggctcgaaatgttatttttgtattttaggcaacttgtacgtgg-------gacaaaaagttgtgttg 4689731  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaacaatatacaactg 261  Q
    || ||| ||||||||||||||| | |||||||||| | ||  ||| || | ||||||| ||| ||| || |||||||| |||||||||| |  |||||||    
T  4689730 tggtttggtgagggacaaaaatatgtgtttttgtcctgtcccttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaacactggacaactg 4689631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 63 - 250
Target Start/End: Complemental strand, 7770404 - 7770223
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    |||||||||||| |||| ||||||||||||| | |  | ||| ||||| |||||||||||| |||||||||||| |       ||||||||||||||| |    
T  7770404 attgaataattttttgttttatacgatttttggggctcgaaatgttatttttgtattttaggcaacttgtacgtgg-------gacaaaaagttgtgctg 7770312  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    || ||| |||| |||||||||| | |||||||||| | ||  ||| || | ||||||||||| ||| || || ||||| ||||||||||    
T  7770311 tggtttggtgaaggacaaaaatatgtgtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacaattttacaaatcaaaca 7770223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 184
Target Start/End: Original strand, 40489298 - 40489422
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||| ||||||   |||||||| ||||| || ||||||||||||||||||| || |       |||||||    
T  40489298 tttttatggcattgagtaattttttgttttatacaatttttgagggacaaaatgttattttggtattttagacaacttgtatgtgg-------gacaaaa 40489390  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat 184  Q
    |||||||| ||||||| |||||||||||||||    
T  40489391 agttgtgctgtgatttggtgagggacaaaaat 40489422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 54 - 250
Target Start/End: Original strand, 553358 - 553549
Alignment:
Q  54 ttttacggtattgaataatttgttgtcttatacgattttttgtgg-acaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    ||||| || ||||||||||||  ||| ||||||||||||| | || |||||| ||||| || |||||||||||||||||||||| |       |||||||    
T  553358 ttttatggcattgaataattttatgttttatacgatttttggggggacaaaatgttattttggtattttagacaacttgtacgtgg-------gacaaaa 553450  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||  ||| ||| ||||| ||||||||| |  ||||||||| | ||  ||| || | ||||||||||| | | || |||||||||||||||||||    
T  553451 agttgtgttgtggtttggtgagagacaaaaatatgagtttttgtcttgtctcttgcctccagtttgtcctgtacttgaaacagttttataaatcaaaca 553549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 81 - 250
Target Start/End: Original strand, 11963330 - 11963493
Alignment:
Q  81 ttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcagtgatttagtgagggacaa 180  Q
    |||||||||||||   |||||||| | ||| || ||||||||||||||||| |||| |       ||||||||||||||| ||| ||| |||||||||||    
T  11963330 ttatacgatttttgagggacaaaatgctattttggtattttagacaacttgcacgtgg-------gacaaaaagttgtgctgtggtttggtgagggacaa 11963422  T
Q  181 aaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||| |  ||||||||||| ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  11963423 aaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 11963493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 69 - 250
Target Start/End: Complemental strand, 21739280 - 21739105
Alignment:
Q  69 taatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcagtgattt 168  Q
    |||||| |||| |||||| ||||||   |||||||| | ||| || |||||||||||||||||||||| |       ||||||||||||||| ||| |||    
T  21739280 taattttttgttttatacaatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaaagttgtgctgtggttt 21739188  T
Q  169 agtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
     ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  21739187 ggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 21739105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 184
Target Start/End: Original strand, 31644417 - 31644531
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    ||||||||||||  ||| ||||| ||||||| | |||||||| | ||| || |||||||||||||||||||||| |       ||||||||||||||| |    
T  31644417 attgaataattttatgttttatatgatttttaggggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaaagttgtgctg 31644509  T
Q  163 tgatttagtgagggacaaaaat 184  Q
    || ||| |||||||||||||||    
T  31644510 tggtttggtgagggacaaaaat 31644531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 76 - 250
Target Start/End: Original strand, 7523156 - 7523324
Alignment:
Q  76 ttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcagtgatttagtgagg 175  Q
    |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       ||||||||||||||  ||| ||| ||||||    
T  7523156 ttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaaagttgtgatgtggtttggtgagg 7523248  T
Q  176 gacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    ||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  7523249 gacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 7523324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 48 - 250
Target Start/End: Complemental strand, 8561121 - 8560926
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaataga 147  Q
    |||| |||||| || ||||| |||||| |||| ||||||||||||| | |||| ||| ||||| || |||||||||||||||||||| | ||       |    
T  8561121 acaaatttttatggcattgattaattttttgttttatacgatttttgg-ggacgaaatgttattttggtattttagacaacttgtacctgga-------a 8561030  T
Q  148 caaaaagttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatca 246  Q
    ||||||||||||  ||| ||| |||||| |||||||| || ||||||||| | ||  |||  ||| |||||||||||  || || |||||||| ||||||    
T  8561029 caaaaagttgtgatgtggtttggtgaggaacaaaaatatcagtttttgtcttgtcctttgctttcagtttgtcctgtatctgaaacagttttacaaatca 8560930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 63 - 136
Target Start/End: Original strand, 24036201 - 24036274
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||||||||| |||| ||||||||||||| | |  ||||| ||||| || ||||||||||||||||||||||    
T  24036201 attgaataattttttgttttatacgatttttggggtgcaaaatgttattttggtattttagacaacttgtacgt 24036274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 184
Target Start/End: Complemental strand, 7208364 - 7208241
Alignment:
Q  54 ttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaa 153  Q
    ||||| || ||||| |||||| |||| |||||||||||||   | |||||| | ||| || ||||||||||||||||||||||        |||||||||    
T  7208364 ttttatggcattgagtaattttttgttttatacgatttttgaggaacaaaatgctattttggtattttagacaacttgtacgt-------gagacaaaaa 7208272  T
Q  154 gttgtgcagtgatttagtgagggacaaaaat 184  Q
    ||||||| ||| ||| |||||||||||||||    
T  7208271 gttgtgctgtggtttggtgagggacaaaaat 7208241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 184
Target Start/End: Complemental strand, 41790596 - 41790473
Alignment:
Q  54 ttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaa 153  Q
    ||||| || ||||| ||||||  ||| ||||||||||||| | |||||||| ||||| || ||||||||||||| ||||||||        |||||||||    
T  41790596 ttttatggcattgagtaattttatgttttatacgatttttgggggacaaaatgttattttagtattttagacaatttgtacgt-------gagacaaaaa 41790504  T
Q  154 gttgtgcagtgatttagtgagggacaaaaat 184  Q
    ||||||  ||| ||| |||||||||||||||    
T  41790503 gttgtgttgtggtttggtgagggacaaaaat 41790473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 268
Target Start/End: Complemental strand, 6284434 - 6284224
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatattt-gtattttagacaacttgtacgtagataaatagacaaa 151  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| ||| ||||||| |||||||||||||| |       ||||||    
T  6284434 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctatttttggtattttggacaacttgtacgtgg-------gacaaa 6284342  T
Q  152 aagttgtgcagtgatttagtgagggac-aaaaattctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    ||||||||  ||| ||| ||||||||| ||||| |  ||||||||| | ||   || || | ||||||||||| ||| ||||||||||| ||||||||||    
T  6284341 aagttgtgttgtggtttggtgagggacaaaaaaataagtttttgtcctgtcccatgcctccagtttgtcctgtacctgaagcagttttacaaatcaaaca 6284242  T
Q  251 atatacaactgaagttat 268  Q
     |  |||||| |||||||    
T  6284241 ctggacaactaaagttat 6284224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 63 - 184
Target Start/End: Original strand, 41459560 - 41459674
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    ||||| |||||| |||| |||||||||||||   |||||||| ||||| ||  ||||||||||||||||||||| ||       ||||||||||||||      
T  41459560 attgagtaattttttgttttatacgatttttgagggacaaaatgttattttgatattttagacaacttgtacgtgga-------acaaaaagttgtgctc 41459652  T
Q  163 tgatttagtgagggacaaaaat 184  Q
    || ||| |||||||||||||||    
T  41459653 tggtttggtgagggacaaaaat 41459674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 184
Target Start/End: Original strand, 8136800 - 8136922
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||| | |||| |||||| |||||||| ||||||   ||||| || ||||||||||||||||||||||||       |||||||    
T  8136800 tttttatggcattgagtaatgttttgttttatactattttttggggacaat--gttattttggtattttagacaacttgtacgtag-------gacaaaa 8136890  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat 184  Q
    |||||||  ||| ||| |||||||||||||||    
T  8136891 agttgtgttgtggtttggtgagggacaaaaat 8136922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 27839180 - 27839127
Alignment:
Q  81 ttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtac 134  Q
    ||||||||||||| | |||||||||| ||| || ||||||||||||||||||||    
T  27839180 ttatacgatttttggaggacaaaaggctattttggtattttagacaacttgtac 27839127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 248
Target Start/End: Original strand, 34794858 - 34795037
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    |||||||||||| |||| |||||||| |||| | | |||||| | ||| || |||||||||||||||| ||||| |       ||||||||||||||  |    
T  34794858 attgaataattttttgttttatacgaattttggggaacaaaatgctattttggtattttagacaacttatacgtgg-------gacaaaaagttgtgatg 34794950  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaa 248  Q
    || ||| ||||||||||||||| |  ||||||||| | ||  ||| ||   ||||||||||| ||| || |||||||| ||||||||    
T  34794951 tggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctctagtttgtcctgtacctgaaacagttttacaaatcaaa 34795037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 69 - 250
Target Start/End: Original strand, 35701254 - 35701429
Alignment:
Q  69 taatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcagtgattt 168  Q
    |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| ||       |||||||||| ||  ||| |||    
T  35701254 taattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgga-------acaaaaagttatgttgtggttt 35701346  T
Q  169 agtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
     ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||  || |||||||| ||||||||||    
T  35701347 ggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtaccagaaacagttttacaaatcaaaca 35701429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 53 - 184
Target Start/End: Complemental strand, 5571777 - 5571655
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| ||||||||||||| | ||||||   | ||| || ||||||||||||||||||||||       | |||||||    
T  5571777 tttttatggcattgagtaattttttgttttatacgatttttgggggacaat--gctattttggtattttagacaacttgtacgt-------tggacaaaa 5571687  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat 184  Q
    |||||||  ||| ||| |||||||||||||||    
T  5571686 agttgtgttgtggtttggtgagggacaaaaat 5571655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 35954974 - 35955016
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttg 95  Q
    |||||| ||||||||||||||| |||||| |||||||||||||    
T  35954974 tttttatggtattgaataattttttgtctaatacgattttttg 35955016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 40182425 - 40182506
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtac 134  Q
    |||||| || ||||| |||||| |||| |||||||||||||    ||||||| | ||| || ||||||||||||||||||||    
T  40182425 tttttatggcattgagtaattttttgttttatacgatttttgagagacaaaatgctattttggtattttagacaacttgtac 40182506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 2e-20; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 54 - 250
Target Start/End: Complemental strand, 12753468 - 12753278
Alignment:
Q  54 ttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaa 153  Q
    ||||| || ||||| ||||||||||| ||||||||||||| | |||||||| ||||| || ||||||||||||||||||| || |       ||||||||    
T  12753468 ttttatggcattgagtaatttgttgttttatacgatttttgggggacaaaatgttattttggtattttagacaacttgtatgtgg-------gacaaaaa 12753376  T
Q  154 gttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    ||||||  ||| ||| |||||| |||||||| |  ||||||||| | ||| ||| |||| ||||||||||| ||| || |||| ||| ||||||||||    
T  12753375 gttgtgttgtggtttggtgaggaacaaaaatatgagtttttgtcttgtcatttgccttcagtttgtcctgtacctgaaacagtcttacaaatcaaaca 12753278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 6460219 - 6460305
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||| |||||| |||||||||||||||  |||||||||||||||||| ||||||||| ||||| || |||||||||||||||| |||||    
T  6460219 acaaatttttatggtattgaataattt--tgtcttatacgattttttatggacaaaatgttattttggtattttagacaacttatacgt 6460305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 3251800 - 3251609
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| ||||| || ||||||||||||||||||||||||       || ||||    
T  3251800 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtag-------gataaaa 3251708  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||  ||| ||| ||||||||||||||| |  ||||||||  | ||  ||| || | ||||||||||| ||| || |||||||||||||||||||    
T  3251707 agttgtgatgtggtttggtgagggacaaaaatataagtttttgttctgtcgcttgcctccagtttgtcctgtacctgaaacagttttataaatcaaaca 3251609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 53 - 266
Target Start/End: Original strand, 15001428 - 15001634
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| |||||||||||||||  ||| ||||| ||||||| | ||||||| | | || || |||||||||| ||||||||||| |       |||||||    
T  15001428 tttttatggtattgaataattttctgttttatatgatttttgggggacaaatgct-attttggtattttagataacttgtacgtgg-------gacaaaa 15001519  T
Q  153 agttgtgcagtgatttagtgagggacaaaaatt-ctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaacaa 251  Q
    |||||||  ||| ||| |||||||||||||||| | ||||||||  | || |||| || | ||||||||||||||| || |||||||| ||||||||||     
T  15001520 agttgtgttgtggtttggtgagggacaaaaatttcagtttttgttctgtctattgcctccagtttgtcctgtccctgaaacagttttacaaatcaaacac 15001619  T
Q  252 tatacaactgaagtt 266  Q
    |  ||||||||||||    
T  15001620 tggacaactgaagtt 15001634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 60 - 261
Target Start/End: Complemental strand, 16595286 - 16595092
Alignment:
Q  60 ggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtg 159  Q
    ||||||||||||||| | |||||||||||||||| ||| |||||| | ||| ||||||||||||| ||||||||||| |       ||||||||||||||    
T  16595286 ggtattgaataatttttggtcttatacgatttttggtgaacaaaaagctatttttgtattttagataacttgtacgtgg-------gacaaaaagttgtg 16595194  T
Q  160 cagtgatttagtgagggacaaaaattc-tgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaacaatatacaa 258  Q
      |||  |||| ||||||||||| ||| |||||||||| | ||  ||| || | |||||| |||||||  || ||  |||| ||||||||||||||||||    
T  16595193 ttgtggattagcgagggacaaaacttcatgtttttgtcctgtcccttgcctacagtttgttctgtcccagaaaca-atttacaaatcaaacaatatacaa 16595095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 25478204 - 25478395
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| ||||||||||||||  ||||||||   ||| || ||||||||||||||||||||||||       |||||||    
T  25478204 tttttatggcattgagtaattttttgttttatacgattttttagggacaaaatactattttggtattttagacaacttgtacgtag-------gacaaaa 25478296  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| |||||||  |||||||||||||| |  |||||| || | ||  |||||| | ||||||||||| ||| || |||||||| |||| |||||    
T  25478297 agttgtgctgtgatttgatgagggacaaaaatatgagtttttttcctgtcccttgtctccagtttgtcctgtacctgaaacagttttacaaattaaaca 25478395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 27103920 - 27104111
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| ||||| |||||||   |||||||| | ||| ||  ||||||||||||||||||||| |       |||||||    
T  27103920 tttttatggcattgagtaattttttgttttatatgatttttgagggacaaaatgctattttgatattttagacaacttgtacgtgg-------gacaaaa 27104012  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||||||| ||| ||||||||||||||| |  ||||||||||| ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  27104013 agttgtgcagtggtttggtgagggacaaaaatatgagtttttgtcatgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 27104111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 41709738 - 41709929
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||| ||||||||||| |       |||||||    
T  41709738 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagataacttgtacgttg-------gacaaaa 41709830  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||| ||| ||||||||||||||| |  ||||||||| | ||| ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  41709831 agttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtcatttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 41709929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 63 - 266
Target Start/End: Original strand, 30501116 - 30501313
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    |||||||||||| |||| ||||||||||||| | |  | ||| ||||| |||||||||||| |||||||||||| |       ||||||||||||||| |    
T  30501116 attgaataattttttgttttatacgatttttggggctcgaaatgttatttttgtattttaggcaacttgtacgtgg-------gacaaaaagttgtgctg 30501208  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaacaatatacaactg 261  Q
    || ||| ||||||||||||||| | |||||||||| | ||  ||| || | ||||||| ||| ||| || |||||||| |||||||||| |   ||||||    
T  30501209 tggtttggtgagggacaaaaatatgtgtttttgtcctgtcccttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaacactgggcaactg 30501308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 6386537 - 6386728
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || ||||||||||||||||||||||        ||||||||    
T  6386537 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgt-------gagacaaaa 6386629  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||  ||| ||| ||||||||||||||| |  ||||||||| ||||  ||  || | ||||||||| | ||| || |||||||||||||||||||    
T  6386630 agttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctatcttttacctccagtttgtcctatacctgaaacagttttataaatcaaaca 6386728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 63 - 248
Target Start/End: Complemental strand, 14005178 - 14004999
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    ||||| |||||| |||| |||||| ||||||| ||||||||| ||||| || |||||||||||||||||||||| |       ||||||||||||||  |    
T  14005178 attgagtaattttttgttttatacaattttttatggacaaaatgttattttggtattttagacaacttgtacgtgg-------gacaaaaagttgtgttg 14005086  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaa 248  Q
    || ||| |||| |||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||    
T  14005085 tggtttggtgatggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcctgtacctcaaacagttttacaaatcaaa 14004999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 34063089 - 34063280
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || |||||||||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  34063089 tttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 34063181  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||| ||| | ||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| ||  ||||||| ||||||||||    
T  34063182 agttgtgctgtggtttggcgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaagagttttacaaatcaaaca 34063280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 250
Target Start/End: Original strand, 10467038 - 10467216
Alignment:
Q  66 gaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcagtga 165  Q
    ||||||||| |||| ||||||||||||| | |||||||| | ||| ||  ||||||||||||||||||||| |       ||||||||||||||  |||     
T  10467038 gaataattttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgg-------gacaaaaagttgtgttgtgg 10467130  T
Q  166 tttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||  ||||| |||||||| || ||||||||| | ||  ||| || | ||||||||||| |||||| |||||||| ||||||||||    
T  10467131 tttgctgaggaacaaaaatatcagtttttgtcttgtctcttgcctccagtttgtcctgtacctaaaacagttttacaaatcaaaca 10467216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 250
Target Start/End: Complemental strand, 30543165 - 30542975
Alignment:
Q  54 ttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaa 153  Q
    ||||| || ||||| ||||||  ||| ||||||||||||| | |||||||| ||||| || |||||||||||||||||||||| |       ||| ||||    
T  30543165 ttttatggcattgagtaattttatgttttatacgatttttgggggacaaaatgttattttggtattttagacaacttgtacgtgg-------gacgaaaa 30543073  T
Q  154 gttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    ||||||  ||| ||| ||||||||||||||| |  ||||||||| | || |||| || | ||||||| ||| ||| || |||||||| ||||||||||    
T  30543072 gttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtccattgcctccagtttgtcatgtacctgaaacagttttacaaatcaaaca 30542975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 266
Target Start/End: Complemental strand, 29611204 - 29610992
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaataga 147  Q
    |||| |||||| ||||||||||||||| |||| ||||| | ||||| | |||| ||| | ||| || || ||||||||||||| ||||| |       ||    
T  29611204 acaaatttttatggtattgaataatttcttgttttatatgctttttgggggacgaaatgctattttggtgttttagacaacttttacgtgg-------ga 29611112  T
Q  148 caaaaagttgtgcagtgatttagtgagggacaaaaatt-ctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatca 246  Q
    ||||||||||||  ||| ||| | |||||||||||||| | ||||||||| | ||  ||| || | |||||| |||||||| || |||||||| ||||||    
T  29611111 caaaaagttgtgttgtggtttggcgagggacaaaaatttcagtttttgtcctgtcccttgcctccagtttgttctgtccctgaaacagttttacaaatca 29611012  T
Q  247 aacaatatacaactgaagtt 266  Q
    |||| |  ||||||||||||    
T  29611011 aacattggacaactgaagtt 29610992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 184
Target Start/End: Complemental strand, 31513727 - 31513603
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||| |||       |||||||    
T  31513727 tttttatggcattgagtaattttttgttttatacgatttttgaaggacaaaatgctattttggtattttagacaacttgtacctag-------gacaaaa 31513635  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat 184  Q
    |||||||| ||| ||| |||||||||||||||    
T  31513634 agttgtgctgtggtttggtgagggacaaaaat 31513603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 136
Target Start/End: Original strand, 41548589 - 41548662
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||||||||| |||| ||||||||||||| | |||||||| ||||| ||  |||||||||||||||||||||    
T  41548589 attgaataattttttgttttatacgatttttgggggacaaaatgttattttgatattttagacaacttgtacgt 41548662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 10656835 - 10656747
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||| |||||| | ||||||||||||| || | |||||||||||||||||||||||  ||||| ||  |||||||||||| ||||||||    
T  10656835 acaaatttttatgttattgaataattttttcttttatacgattttttgtggacaaattgttattttgatattttagacaatttgtacgt 10656747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 133
Target Start/End: Original strand, 54133 - 54211
Alignment:
Q  54 ttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgta 133  Q
    ||||| ||||||||||||||| |||||||| ||||||||||||||| ||||  |||| |||||||||| || ||||||||    
T  54133 ttttatggtattgaataattttttgtcttaaacgattttttgtggataaaatattat-tttgtattttcgataacttgta 54211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 266
Target Start/End: Complemental strand, 7591581 - 7591384
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    |||||||||||| |||| ||||||||||||| | |||||||| | ||| ||  ||||||||||||||| |||||         ||||||||||||||  |    
T  7591581 attgaataattttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttatacgt-------gtgacaaaaagttgtgttg 7591489  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaacaatatacaactg 261  Q
    || |||  ||||| |||||||| || ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| |||||||||| |  |||||||    
T  7591488 tggtttgctgaggcacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacactggacaactg 7591389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 76 - 250
Target Start/End: Original strand, 4052464 - 4052632
Alignment:
Q  76 ttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcagtgatttagtgagg 175  Q
    |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       ||||||||||||||| ||| ||| ||||||    
T  4052464 ttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaaagttgtgctgtggtttggtgagg 4052556  T
Q  176 gacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    ||||||||| |  ||||||||| | ||  ||| || |  |||||||||| ||| || |||||||| ||||||||||    
T  4052557 gacaaaaatatgagtttttgtcctgtcccttgcctccaatttgtcctgtacctgaaacagttttacaaatcaaaca 4052632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 53 - 184
Target Start/End: Original strand, 45446416 - 45446540
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  45446416 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 45446508  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat 184  Q
    |||||||| ||| ||| |||||| ||||||||    
T  45446509 agttgtgctgtggtttggtgaggaacaaaaat 45446540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 8673199 - 8673008
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| ||||| |||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  8673199 tttttatggcattgagtaattttttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 8673107  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||  ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||| ||| ||| || |||||||| ||||||||||    
T  8673106 agttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcatgtacctgaaacagttttacaaatcaaaca 8673008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 266
Target Start/End: Original strand, 10932704 - 10932903
Alignment:
Q  60 ggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtg 159  Q
    ||||||||||||||| | ||||||||  |  |||| ||||||||||  ||| || ||||||||||||| |||||||| ||       || ||||||||||    
T  10932704 ggtattgaataatttttggtcttataaaaaattttatggacaaaagactattttggtattttagacaaattgtacgtgga-------actaaaagttgtg 10932796  T
Q  160 cagtgatttagtgagggacaaaaattctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaacaatatacaac 259  Q
      ||| ||||||||||||||||| ||  |||||| |||| ||  ||| ||    |||||| ||||||  || || ||||||||||||||||  |||||||    
T  10932797 atgtggtttagtgagggacaaaattttagtttttatcatgtctcttgcctctactttgtcttgtcccataaacaattttataaatcaaacaccatacaac 10932896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 29563370 - 29563179
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   ||||||||   ||| || |||||||||||||||||||||| |       |||||||    
T  29563370 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatactattttggtattttagacaacttgtacgtgg-------gacaaaa 29563278  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||  ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| ||   ||||||||||| ||| || |||||||| ||||||||||    
T  29563277 agttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctcgagtttgtcctgtacctgaaacagttttacaaatcaaaca 29563179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 32020145 - 32019954
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   ||||||||   ||| || |||||||||||||||||||||| ||       ||||||    
T  32020145 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatactattttggtattttagacaacttgtacgtgga-------acaaaa 32020053  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||| ||| |||||||| |||||| |  ||||||||| || |  |||  | | ||||||||||| ||| || |||||||| ||||||||||    
T  32020052 agttgtgctgtggtttggtgagggataaaaatatgagtttttgtcctaccccttgcttccagtttgtcctgtacctgaaacagttttacaaatcaaaca 32019954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 5969008 - 5968925
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| ||||| || ||||||||||||| ||||||||    
T  5969008 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaatttgtacgt 5968925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 10320421 - 10320338
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| ||||||||||||||| | || |||||||||| ||  | ||||||| ||||| ||  |||||||||||||||||||||    
T  10320421 tttttatggtattgaataatttttggttttatacgattgttgttagacaaaatgttattttgatattttagacaacttgtacgt 10320338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 48 - 185
Target Start/End: Complemental strand, 16485958 - 16485828
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaataga 147  Q
    |||| |||||| |||||||||||||||  ||| ||||| ||||||| |  ||| ||| | ||| ||||||||||||| ||||| |||||||       ||    
T  16485958 acaaatttttatggtattgaataattttctgtattatatgatttttgggtgacgaaatgctatttttgtattttagaaaacttatacgtag-------ga 16485866  T
Q  148 caaaaagttgtgcagtgatttagtgagggacaaaaatt 185  Q
    ||||||||||||| ||| ||| | ||||||||||||||    
T  16485865 caaaaagttgtgctgtggtttggcgagggacaaaaatt 16485828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 134
Target Start/End: Original strand, 35225618 - 35225704
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtac 134  Q
    |||| |||||| |||||||||||||||  ||| ||||| ||||||| |  ||| ||| | ||| |||||||||||||||||||||||    
T  35225618 acaaatttttatggtattgaataatttcctgttttatatgatttttgggtgacgaaatgctatttttgtattttagacaacttgtac 35225704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 250
Target Start/End: Complemental strand, 37618526 - 37618345
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    |||||||||||| |||| |||||| |||||| | |||| ||| | ||| || |||||| | |||||||||||||        |||||||||||||||  |    
T  37618526 attgaataattttttgttttatacaatttttgggggacgaaatgctattttggtatttaaaacaacttgtacgtg-------agacaaaaagttgtgttg 37618434  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    || ||| ||||||||||||||| || ||||||||| | ||  ||| || |  |||||||||| ||| || |||||||| ||||||||||    
T  37618433 tggtttggtgagggacaaaaatatcagtttttgtcctgtcctttgcctccaatttgtcctgtacctgaaacagttttacaaatcaaaca 37618345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 266
Target Start/End: Original strand, 39642854 - 39643051
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    |||||||||||| |||| |||||| |||||| | |||  ||| | ||| || |||||||||||||| ||||||| |       |||| |||||||||  |    
T  39642854 attgaataattttttgttttatacaatttttgggggatgaaatgctattttggtattttagacaacctgtacgtgg-------gacagaaagttgtgttg 39642946  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaacaatatacaactg 261  Q
    || ||| ||||||||||||||| || |||||| || | ||  ||| || | ||||||||||| ||| || |||||||| |||||||||| |  |||||||    
T  39642947 tggtttggtgagggacaaaaatatcagtttttatcttgtcccttgcctccagtttgtcctgtacctgaaacagttttaaaaatcaaacactggacaactg 39643046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 10531246 - 10531319
Alignment:
Q  60 ggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgta 133  Q
    ||||||||||||||| || ||||||| |||||||| |||||||||| |||| || ||||| || |||| |||||    
T  10531246 ggtattgaataattttttatcttataagattttttatggacaaaagattattttggtattctaaacaatttgta 10531319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 13407069 - 13406996
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    ||||| |||||| |||| ||||||||||||| | | |||||| | ||| || ||||||||||||||||||||||    
T  13407069 attgagtaattttttgttttatacgatttttggggcacaaaatgctattttggtattttagacaacttgtacgt 13406996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 136
Target Start/End: Original strand, 22999228 - 22999301
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||||||||| |||| ||||||||||||| | |||||||| | ||| ||  |||||||||||| ||||||||    
T  22999228 attgaataattttttgttttatacgatttttggaggacaaaatgctattttgatattttagacaagttgtacgt 22999301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 184
Target Start/End: Original strand, 31732025 - 31732149
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || ||||||||||||||||||| ||        ||||||||    
T  31732025 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtatgt-------gagacaaaa 31732117  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat 184  Q
    |||||| | ||| ||| |||||||||||||||    
T  31732118 agttgtactgtggtttggtgagggacaaaaat 31732149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 184
Target Start/End: Complemental strand, 32303729 - 32303605
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| ||||| |||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  32303729 tttttatggcattgagtaattttttgttttatatgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 32303637  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat 184  Q
    |||||||  ||| ||| |||||||||||||||    
T  32303636 agttgtgttgtggtttggtgagggacaaaaat 32303605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 69 - 250
Target Start/End: Complemental strand, 7394942 - 7394767
Alignment:
Q  69 taatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcagtgattt 168  Q
    |||||| |||| |||| ||||||||   |||||||| ||||| || ||||||||||||||||||||||        |||||||||||||||   || |||    
T  7394942 taattttttgttttatgcgatttttgaaggacaaaatgttattttggtattttagacaacttgtacgt-------gagacaaaaagttgtgttatggttt 7394850  T
Q  169 agtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
     ||||||||||||||| |  ||||||||||| ||  ||| ||   ||||||| ||| ||| || ||||||| |||||||||||    
T  7394849 ggtgagggacaaaaatatgagtttttgtcatgtcccttgcctctagtttgtcatgtacctgaaacagttttgtaaatcaaaca 7394767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 17805667 - 17805735
Alignment:
Q  69 taatttgttgtcttatacgattttttgt-ggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| |||| ||||||||||||| |  |||||||| ||||| || ||||||||||||||||||||||    
T  17805667 taattttttgttttatacgatttttgggaggacaaaatgttattttggtattttagacaacttgtacgt 17805735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 34101480 - 34101552
Alignment:
Q  64 ttgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||| |||||| |||| |||||||||||||   |||||||| | ||| || ||||||||||||||||||||||    
T  34101480 ttgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgt 34101552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 184
Target Start/End: Complemental strand, 29672457 - 29672343
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||| ||||||||||| |       ||||||||||||||  |    
T  29672457 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagataacttgtacgtgg-------gacaaaaagttgtgttg 29672365  T
Q  163 tgatttagtgagggacaaaaat 184  Q
    || ||| |||||||||||||||    
T  29672364 tggtttggtgagggacaaaaat 29672343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 134
Target Start/End: Original strand, 45114026 - 45114097
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtac 134  Q
    ||||||||||||  ||| ||||||||||||| | |||| ||| | ||| || ||||||||||||||||||||    
T  45114026 attgaataattttatgttttatacgatttttggaggacgaaatgctattttggtattttagacaacttgtac 45114097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 14958946 - 14959002
Alignment:
Q  79 tcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||||||||||||||||| ||||| ||||| ||  |||||||||| ||||||||||    
T  14958946 tcttatacgattttttgtgggcaaaaagttattttgatattttagac-acttgtacgt 14959002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 250
Target Start/End: Original strand, 40389087 - 40389192
Alignment:
Q  146 gacaaaaagttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaat 244  Q
    ||||||||||||||| ||| ||| ||||| || |||||| || ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||    
T  40389087 gacaaaaagttgtgctgtggtttggtgagagataaaaatatcagtttttgtcctgtcctttgcctccagtttgtcctgtacctgaaacagttttacaaat 40389186  T
Q  245 caaaca 250  Q
    ||||||    
T  40389187 caaaca 40389192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 61 - 136
Target Start/End: Original strand, 4599631 - 4599707
Alignment:
Q  61 gtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatattt-gtattttagacaacttgtacgt 136  Q
    |||||||||||||| || || ||||  |||||| || ||||||| ||||| ||| |||||||||| |||||||||||    
T  4599631 gtattgaataattttttatcctatataatttttggtagacaaaaagttattttttgtattttagataacttgtacgt 4599707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 5859608 - 5859532
Alignment:
Q  61 gtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgta 137  Q
    ||||||| |||||  | |||||||| |||||||| |||||||||   ||| || |||||||||| ||||||||||||    
T  5859608 gtattgattaattattggtcttataagattttttatggacaaaatactattttagtattttagataacttgtacgta 5859532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 18297498 - 18297458
Alignment:
Q  64 ttgaataatttgttgtcttatacgattttttgtggacaaaa 104  Q
    ||||||||||| | |||||||||||||||||||| ||||||    
T  18297498 ttgaataatttttggtcttatacgattttttgtgaacaaaa 18297458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 36426355 - 36426311
Alignment:
Q  89 ttttttgtggacaaaaggttatatttgtattttagacaacttgta 133  Q
    |||||||||||||||||  ||| || |||||||||||||||||||    
T  36426355 ttttttgtggacaaaagactattttggtattttagacaacttgta 36426311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 7e-20; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 48 - 263
Target Start/End: Complemental strand, 7396296 - 7396090
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaataga 147  Q
    |||| |||||| |||||||||||||||  ||||| |||| ||||||  |||||||||   ||| ||||||||||||| |||||||||||        |||    
T  7396296 acaaatttttatggtattgaataattt--tgtctcataccatttttgatggacaaaacactatttttgtattttagataacttgtacgtg-------aga 7396206  T
Q  148 caaaaagttgtgcagtgatttagtgagggacaaaaattctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaa 247  Q
    |||||||||||| |||| ||||||||||||||| | ||||||||||||| | || ||||  | | | ||||| ||||||  || ||| |||| |||||||    
T  7396205 caaaaagttgtgtagtggtttagtgagggacaagatttctgtttttgtcctgtccattgcttccagcttgtcatgtcccagaaacagctttacaaatcaa 7396106  T
Q  248 acaatatacaactgaa 263  Q
    |||  |||||||||||    
T  7396105 acaccatacaactgaa 7396090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 53 - 184
Target Start/End: Complemental strand, 10324279 - 10324155
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| ||||||||||||||| |||||||| ||||| || ||||||||||||||||||||||        ||||||||    
T  10324279 tttttatgggattgagtaattttttgttttatacgattttttggggacaaaatgttattttggtattttagacaacttgtacgt-------gagacaaaa 10324187  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat 184  Q
    |||||||  ||| ||| |||||||||||||||    
T  10324186 agttgtgttgtggtttggtgagggacaaaaat 10324155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 48 - 250
Target Start/End: Original strand, 10959956 - 10960152
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaataga 147  Q
    |||| |||||| || ||||||| || | |||| ||||||||||||| | |||||||| | ||| ||||||||||||||||||||||||| |       ||    
T  10959956 acaaatttttatggcattgaatgatattttgttttatacgatttttgggggacaaaatgctatttttgtattttagacaacttgtacgtgg-------ga 10960048  T
Q  148 caaaaagttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatca 246  Q
    ||||||||||||  ||| |||  |||||||||||||| |  ||||||||| | ||  ||| |||| ||||||||||| ||| || |||||||| ||||||    
T  10960049 caaaaagttgtgttgtggtttgttgagggacaaaaatatgagtttttgtcctgtcccttgccttcagtttgtcctgtacctgaaacagttttacaaatca 10960148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 53 - 251
Target Start/End: Original strand, 34176791 - 34176983
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || ||||||||||| |||||||||| |       |||||||    
T  34176791 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagactacttgtacgtgg-------gacaaaa 34176883  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaacaa 251  Q
    |||||||| ||||||| ||||| ||||||||| |  ||||||||||| ||| ||| || | ||||||| ||| ||| || |||||||| |||||||||||    
T  34176884 agttgtgctgtgatttggtgagagacaaaaatatgagtttttgtcatgtcacttgcctccagtttgtcatgtacctgaaacagttttacaaatcaaacaa 34176983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 24203324 - 24203514
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||| |||||  | |||||||| ||||| || |||||||||||||||||||||| |       |||||||    
T  24203324 tttttatggcattgagtaattttttgttttatacaattttgag-ggacaaaatgttattttggtattttagacaacttgtacgtgg-------gacaaaa 24203415  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| |||||| |||||||| ||||||||||    
T  24203416 agttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgtctcttgcctccagtttgtcctgtacctaaaacagttttacaaatcaaaca 24203514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 32132548 - 32132357
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| ||||||||||| ||||||||||||| | |||||||| | ||| ||  ||||||||||||||||||||| |       |||||||    
T  32132548 tttttatggcattgagtaatttgttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgg-------gacaaaa 32132456  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||  |||  || ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| |||||| |||||||| ||||||||||    
T  32132455 agttgtgttgtggattggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctaaaacagttttacaaatcaaaca 32132357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 3932975 - 3932784
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || |||||||||||| |||| |||||||||||||   |||||||| ||||| || |||||||||||||||||||||| |       |||||||    
T  3932975 tttttatggcattgaataattttttgttttatacgatttttgagggacaaaatgttattttggtattttagacaacttgtacgtgg-------gacaaaa 3932883  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||  ||| ||| ||||| ||||||||| |  ||||||||| |  |  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  3932882 agttgtgatgtggtttggtgagagacaaaaatatgagtttttgtcctgccccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 3932784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 63 - 250
Target Start/End: Original strand, 10485128 - 10485309
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    |||||||||||| |||| ||||||||||||| | |||||||| | ||| ||  ||||||||||||||||||||| |       ||||||||||||||| |    
T  10485128 attgaataattttttgttttatacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgg-------gacaaaaagttgtgctg 10485220  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    || |||  |||||||||||||| || ||||||||| | ||  ||| || | ||||||||||| ||| ||  | ||||| ||||||||||    
T  10485221 tggtttgctgagggacaaaaatatcagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaataattttacaaatcaaaca 10485309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 3259644 - 3259835
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       || ||||    
T  3259644 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gataaaa 3259736  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||  ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  3259737 agttgtgttgtggtttggtgagggacaaaaatatgagtttttgtcctgtctcttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 3259835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 11613959 - 11613768
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||| ||||||||||||| |       |||||||    
T  11613959 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttatacaacttgtacgtgg-------gacaaaa 11613867  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||| ||| ||||||||||||||| |  ||||||||| | |   |||||| |  |||||||||| ||| || |||||||| ||||||||||    
T  11613866 agttgtgctgtggtttggtgagggacaaaaatatgagtttttgtcctgttccttgtctccattttgtcctgtacctgaaacagttttacaaatcaaaca 11613768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 54 - 138
Target Start/End: Complemental strand, 29424734 - 29424650
Alignment:
Q  54 ttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtag 138  Q
    ||||| ||||||||||||||| | ||||| |||| ||||| ||||||||||   ||| ||||||||||||| |||||||||||||    
T  29424734 ttttatggtattgaataatttttggtcttgtacgttttttggtggacaaaaaactatttttgtattttagataacttgtacgtag 29424650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 292
Target Start/End: Original strand, 9613946 - 9614168
Alignment:
Q  64 ttgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcagt 163  Q
    ||||||||||| | || ||||| |||| |||||||||| ||| |||| || |||||||||||||||| ||||| ||       ||||||| |||||  |     
T  9613946 ttgaataatttttggtgttatatgattatttgtggacagaagattattttagtattttagacaacttatacgtgga-------acaaaaaattgtgttgc 9614038  T
Q  164 gatttagtgagggacaaaaa-ttctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaacaatatacaactga 262  Q
    | |||||||||  ||||||| |||   ||||||||| ||  ||| || | |||| |||||||| | || |||||||| |||||||||| | |||||||||    
T  9614039 ggtttagtgagtaacaaaaacttcaaattttgtcatgtcccttgcctccagtttatcctgtccttgaaacagttttacaaatcaaacattgtacaactga 9614138  T
Q  263 agttatcttgtgatctccgttattttttag 292  Q
    |||| |||||| || ||| | |||||||||    
T  9614139 agttttcttgttatgtccttcattttttag 9614168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 198
Target Start/End: Original strand, 29054319 - 29054456
Alignment:
Q  54 ttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaa 153  Q
    ||||| |||||||||||||||  ||| ||||| ||||||| |  ||| ||| ||||| |||||||||||||||||||||||||        |||||||||    
T  29054319 ttttatggtattgaataattttctgtattatatgatttttgggtgacgaaatgttat-tttgtattttagacaacttgtacgt-------gagacaaaaa 29054410  T
Q  154 gttgtgcagtgatttagtgagggacaaaaattct-gtttttgtcat 198  Q
    ||||||| ||| ||| | |||||||||||||| | |||||||||||    
T  29054411 gttgtgctgtggtttggcgagggacaaaaattgtagtttttgtcat 29054456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 250
Target Start/End: Complemental strand, 15277438 - 15277257
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    ||||| ||||||||||| ||||||||||||| |  ||||||| | ||| || |||||||||||||||||||||| |       || |||||||||||  |    
T  15277438 attgagtaatttgttgttttatacgatttttggaagacaaaatgctattttggtattttagacaacttgtacgtgg-------gataaaaagttgtgatg 15277346  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    || ||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || || ||||| ||||||||||    
T  15277345 tggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtaccttaaacaattttacaaatcaaaca 15277257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 134
Target Start/End: Complemental strand, 16542436 - 16542362
Alignment:
Q  60 ggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtac 134  Q
    ||||||||||||||| || |||||||| ||||||  || | |||||||||| || ||||||||||||||||||||    
T  16542436 ggtattgaataattttttatcttatacaatttttgttgcataaaaggttattttggtattttagacaacttgtac 16542362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 250
Target Start/End: Original strand, 24242635 - 24242816
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       ||||||||||||||  |    
T  24242635 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaaagttgtgatg 24242727  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    || ||| ||||||||||||||| |  ||||||||  | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  24242728 tggtttggtgagggacaaaaatatgagtttttgttgtgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 24242816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 250
Target Start/End: Complemental strand, 32410010 - 32409829
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    |||||||||||| |||| |||||||||||||   ||||||||   ||| || ||||||||||||||||||  || |       ||||||||||||||  |    
T  32410010 attgaataattttttgttttatacgatttttgagggacaaaatactattttggtattttagacaacttgtgagtgg-------gacaaaaagttgtgatg 32409918  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    || ||| ||||||||||||||| |  ||||||||| | ||  |||||| | ||||||||||| ||| || |||||||| ||||||||||    
T  32409917 tggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgtctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 32409829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 53 - 184
Target Start/End: Original strand, 2614857 - 2614981
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| || | |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  2614857 tttttatggcattgagtaattttttattttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 2614949  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat 184  Q
    |||||||| ||| ||| |||||||||||||||    
T  2614950 agttgtgctgtggtttggtgagggacaaaaat 2614981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 17867796 - 17867987
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || ||||||||||||| |||||||| |       |||||||    
T  17867796 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaatttgtacgtgg-------gacaaaa 17867888  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||| |||  |||||||||||||| |  |||||| || | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  17867889 agttgtgctgtggtttgatgagggacaaaaatatgagtttttatcttgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 17867987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 17877579 - 17877770
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || ||||||||||||| |||||||| |       |||||||    
T  17877579 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaatttgtacgtgg-------gacaaaa 17877671  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||| |||  |||||||||||||| |  |||||| || | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  17877672 agttgtgctgtggtttgatgagggacaaaaatatgagtttttatcttgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 17877770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 63 - 184
Target Start/End: Original strand, 18057490 - 18057604
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    ||||||||||||  ||| ||||||||||||| | |||| ||| | ||| || |||||||||||||||||||||| |       ||||||||||||| | |    
T  18057490 attgaataattttatgttttatacgatttttagaggacgaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaaagttgtactg 18057582  T
Q  163 tgatttagtgagggacaaaaat 184  Q
    || ||| |||||||||||||||    
T  18057583 tggtttggtgagggacaaaaat 18057604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 32614105 - 32614030
Alignment:
Q  54 ttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaact 129  Q
    ||||| ||||||  ||||||| | |||||||||||||||| |||||||||| ||||| ||| ||||||||| ||||    
T  32614105 ttttatggtattatataatttttggtcttatacgatttttggtggacaaaaagttatttttatattttagataact 32614030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 263
Target Start/End: Complemental strand, 18597240 - 18597122
Alignment:
Q  146 gacaaaaagttgtgcagtgatttagtgagggacaaaaa-ttctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaat 244  Q
    ||||||||||||||  ||| ||| |||||||||||||| ||| | ||||||||| ||  ||| || ||||||||| | ||||| || |||||||| ||||    
T  18597240 gacaaaaagttgtgttgtggtttggtgagggacaaaaatttcagattttgtcatgtcccttgcctccggtttgtcatatccctgaaacagttttacaaat 18597141  T
Q  245 caaacaatatacaactgaa 263  Q
    |||||| |  |||||||||    
T  18597140 caaacactgaacaactgaa 18597122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 184
Target Start/End: Complemental strand, 31870273 - 31870144
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaataga 147  Q
    |||| |||||| || |||||||||||| |||| |||||||| |||| | |||| ||| | ||| ||||||||||||||||| | ||||| |       ||    
T  31870273 acaaatttttatggcattgaataattttttgttttatacgagttttgggggacgaaatgctatttttgtattttagacaacctatacgtgg-------ga 31870181  T
Q  148 caaaaagttgtgcagtgatttagtgagggacaaaaat 184  Q
    ||||||||||||  ||| ||| |||||||||||||||    
T  31870180 caaaaagttgtgttgtggtttggtgagggacaaaaat 31870144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 136
Target Start/End: Original strand, 17443233 - 17443306
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    ||||||||||||  ||| ||||||||||||| | |||| ||| | ||| || ||||||||||||||||||||||    
T  17443233 attgaataattttatgttttatacgatttttggaggacgaaatgctattttggtattttagacaacttgtacgt 17443306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 250
Target Start/End: Original strand, 32860007 - 32860203
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaataga 147  Q
    |||| |||||| |||||||||||||||  ||| ||||  ||||||| |  ||| ||| ||||| ||||||||||||| |||||||||||        |||    
T  32860007 acaaatttttatggtattgaataattttctgtattatttgatttttgggtgacgaaatgttatttttgtattttagaaaacttgtacgt-------gaga 32860099  T
Q  148 caaaaagttgtgcagtgatttagtgagggacaaaaatt-ctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatca 246  Q
    ||||| ||||||| ||| ||| | || ||||||||||| | | ||||||||| ||  ||| || | ||||||| ||||||| || | |||||| ||||||    
T  32860100 caaaaggttgtgctgtggtttggcgatggacaaaaattgcagcttttgtcatgtcccttgcctccagtttgtcatgtccctgaaactgttttacaaatca 32860199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 11382040 - 11382108
Alignment:
Q  68 ataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    ||||||| |||| |||||||||||||   |||||||| | ||| || ||||||||||||||||||||||    
T  11382040 ataattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgt 11382108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 250
Target Start/End: Original strand, 3379756 - 3379862
Alignment:
Q  145 agacaaaaagttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaa 243  Q
    ||||||||||||||||  || ||| ||||| ||||||||| || ||||||||| | ||  ||| || | |||||||||||  || || ||||||||||||    
T  3379756 agacaaaaagttgtgctatggtttggtgagcgacaaaaatatcagtttttgtcttgtctcttgcctccagtttgtcctgtatctgaaacagttttataaa 3379855  T
Q  244 tcaaaca 250  Q
    |||||||    
T  3379856 tcaaaca 3379862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 88 - 184
Target Start/End: Complemental strand, 4494248 - 4494159
Alignment:
Q  88 attttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcagtgatttagtgagggacaaaaat 184  Q
    |||||||| |||||||| ||||| |  |||||||||||||||||||||| |       ||||||||||||| | ||| ||| |||||||||||||||    
T  4494248 attttttggggacaaaatgttatttcggtattttagacaacttgtacgtgg-------gacaaaaagttgtactgtggtttggtgagggacaaaaat 4494159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 60 - 134
Target Start/End: Original strand, 8844415 - 8844489
Alignment:
Q  60 ggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtac 134  Q
    |||||| |||||||  ||||||||||| || ||| |||||||||||  ||| || |||| |||||||||||||||    
T  8844415 ggtattaaataattgtttgtcttatactatgtttggtggacaaaagactattttagtatcttagacaacttgtac 8844489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 54 - 136
Target Start/End: Complemental strand, 27824817 - 27824735
Alignment:
Q  54 ttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    ||||| ||||||||||||||| |  ||||||| |||||||  ||||||||| | ||| |||||||||| || |||| ||||||    
T  27824817 ttttatggtattgaataatttttgatcttatatgatttttgttggacaaaaagctatttttgtattttggataactcgtacgt 27824735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 34684136 - 34684027
Alignment:
Q  69 taatttgttgtcttatacgattttttgtggacaaaaggttatatttgta-ttttagacaacttgtacgtagataaatagacaaaaagttgtgcagtgatt 167  Q
    |||||| |||| ||||||||||||| | |||||||| | ||| || ||| ||||||||||||||||||| ||       |||||||||||||  ||| ||    
T  34684136 taattttttgttttatacgatttttggaggacaaaatgctattttggtatttttagacaacttgtacgtgga-------acaaaaagttgtgttgtggtt 34684044  T
Q  168 tagtgagggacaaaaat 184  Q
    | |||||||||||||||    
T  34684043 tggtgagggacaaaaat 34684027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 225
Target Start/End: Complemental strand, 5650787 - 5650706
Alignment:
Q  145 agacaaaaagttgtgcagtgatttagtgagggacaaaaa-ttctgtttttgtcatatcaattgtcttcggtttgtcctgtcc 225  Q
    |||| ||| |||||||  ||||||||||||| ||||||| ||| ||||||||| |||| |||| |||| ||||||| |||||    
T  5650787 agaccaaatgttgtgctatgatttagtgaggaacaaaaatttcagtttttgtcgtatctattgccttcagtttgtcttgtcc 5650706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 250
Target Start/End: Original strand, 11212229 - 11212409
Alignment:
Q  64 ttgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcagt 163  Q
    |||| |||||| |||| |||| ||||||||   |||||||| ||||| || ||||||||||||||||| ||||        |||||||| ||| ||  ||    
T  11212229 ttgagtaattttttgttttattcgatttttgagggacaaaatgttattttggtattttagacaacttgcacgt-------gagacaaaaggttatgttgt 11212321  T
Q  164 gatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    | ||| ||||||||||||| | |  ||||||||||| ||  || ||| | ||||||||||| ||| || |||||||| ||||||||||    
T  11212322 ggtttggtgagggacaaaagtatgagtttttgtcatgtcccttatctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 11212409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 260
Target Start/End: Complemental strand, 15277104 - 15276904
Alignment:
Q  54 ttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaa 153  Q
    ||||| || ||||| |||||| |||| ||||| |||||||   |||||||| | ||| ||  | ||||||||||||||||||| |       || |||||    
T  15277104 ttttatggcattgagtaattttttgttttataagatttttgagggacaaaatgctattttgttcttttagacaacttgtacgtgg-------gaaaaaaa 15277012  T
Q  154 gttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaacaat 252  Q
    ||||||  ||| ||| ||||||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| |||||||||| |    
T  15277011 gttgtgatgtggtttggtgagggacaaaaatatgagtttttgtcctgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaacatt 15276912  T
Q  253 atacaact 260  Q
    | ||||||    
T  15276911 agacaact 15276904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 13412654 - 13412710
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaa 104  Q
    |||| ||||||  |||||||||||||| |  ||||||| ||||||||||||||||||    
T  13412654 acaaatttttatagtattgaataatttttcatcttatatgattttttgtggacaaaa 13412710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 53 - 184
Target Start/End: Complemental strand, 19225 - 19101
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| ||||| || |||||||||||||||||||||| |       |||||||    
T  19225 tttttatggcattgagtaattttttgttttatacgatttttgaaggacaaaatgttattttggtattttagacaacttgtacgtgg-------gacaaaa 19133  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat 184  Q
    |||||||| ||||||| |||||||||||||||    
T  19132 agttgtgctgtgatttggtgagggacaaaaat 19101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 373099 - 372908
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  373099 tttttatggcattgagtaattttttgttttatacgatttttgagggacaaaatgatattttggtattttagacaacttgtacgtgg-------gacaaaa 373007  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||   || ||| ||||||||||||||| |  ||||||||||||||  |||||| | |||| | |||| ||| || |||||||| ||||||||||    
T  373006 agttgtgttatggtttggtgagggacaaaaatatgagtttttgtcatatcccttgtctccagttttttctgtacctgaaacagttttacaaatcaaaca 372908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 184
Target Start/End: Original strand, 101910 - 102034
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| ||||||||||||||  |||||||| | ||| || |||||||||||||||||||||| |       |||||||    
T  101910 tttttatggcattgagtaattttttgttttatacgattttttagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaa 102002  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat 184  Q
    |||||||  ||| ||| |||||||||||||||    
T  102003 agttgtgatgtggtttggtgagggacaaaaat 102034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 250
Target Start/End: Original strand, 15143 - 15324
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    ||||| ||||||||||| ||||| ||||||| | ||||||||   ||| || ||||||||||||||||||||||        |||||||||||||||  |    
T  15143 attgagtaatttgttgttttataagatttttgggggacaaaatactattttagtattttagacaacttgtacgt-------gagacaaaaagttgtgttg 15235  T
Q  163 tgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    || ||| ||| ||||||||||| |  ||||||||| | ||  ||| || | ||||||||||| ||| || |||||||| ||||||||||    
T  15236 tggtttggtgggggacaaaaatatgagtttttgtcttgtcccttgcctccagtttgtcctgtacctgaaacagttttacaaatcaaaca 15324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 48 - 250
Target Start/End: Complemental strand, 1783 - 1587
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaataga 147  Q
    |||| |||||| ||||||||||||||| |||| ||||| || ||||   |||| ||| | ||| || || ||||||||||||||||||| |       ||    
T  1783 acaaatttttatggtattgaataattttttgttttatatgacttttgagggacgaaatgctattttggttttttagacaacttgtacgtgg-------ga 1691  T
Q  148 caaaaagttgtgcagtgatttagtgagggacaaaaa-ttctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatca 246  Q
    ||||||||||||  ||| ||| |||||||||||||| ||| ||||||||| | ||  ||| || | ||||||||| ||| | || |||||||| ||||||    
T  1690 caaaaagttgtgttgtggtttggtgagggacaaaaatttcagtttttgtcttgtcccttgcctccagtttgtcctatccttgaaacagttttacaaatca 1591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 48 - 250
Target Start/End: Complemental strand, 13827 - 13631
Alignment:
Q  48 acaagtttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaataga 147  Q
    |||| |||||| ||||||||||||||| |||| ||||| | ||||| | ||||  || | ||| || || |||||||||||||||| || |       ||    
T  13827 acaaatttttatggtattgaataatttcttgttttatatgctttttgggggacggaatgctattttggtgttttagacaacttgtaagtgg-------ga 13735  T
Q  148 caaaaagttgtgcagtgatttagtgagggacaaaaa-ttctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatca 246  Q
    ||||||||||| | ||| ||| |||||||||||||| ||| ||||||||| ||||  ||| || | |||||| |||||||| || || ||||| ||||||    
T  13734 caaaaagttgtactgtggtttggtgagggacaaaaatttcagtttttgtcctatcccttgcctccagtttgttctgtccctgaaacaattttacaaatca 13635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 23538 - 23727
Alignment:
Q  53 tttttacggtattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaa 152  Q
    |||||| || ||||| |||||| |||| |||||||||||||   ||||||   ||||| || |||||||||||||||||||||| |       |||||||    
T  23538 tttttatggcattgagtaattttttgttttatacgatttttgagggacaat--gttattttggtattttagacaacttgtacgtgg-------gacaaaa 23628  T
Q  153 agttgtgcagtgatttagtgagggacaaaaat-tctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaaca 250  Q
    |||||||| ||| ||| |||| |||||||||| |  ||||||||||| ||  ||| ||   ||||||||||| ||| || |||||||| ||||||||||    
T  23629 agttgtgctgtggtttggtgaaggacaaaaatatgagtttttgtcatgtcccttgcctcaagtttgtcctgtacctgaaacagttttacaaatcaaaca 23727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 19955 - 20072
Alignment:
Q  147 acaaaaagttgtgcagtgatttagtgagggacaa-aaattctgtttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatc 245  Q
    |||||||||||| ||||| ||||||||| ||||| || ||| ||||||||||||||  || ||| |  |||||| | || ||||| |||||||| | |||    
T  19955 acaaaaagttgtacagtggtttagtgagtgacaagaatttcagtttttgtcatatcccttttctacaatttgtcttatctctaaaacagttttacatatc 20054  T
Q  246 aaacaatatacaactgaa 263  Q
    ||||| | || |||||||    
T  20055 aaacactgtataactgaa 20072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 2614 - 2547
Alignment:
Q  69 taatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgt 136  Q
    |||||| |||| ||||||||||||| | |||||||| | ||| || ||||||||||||||||||||||    
T  2614 taattttttgttttatacgatttttgggggacaaaatgctattttggtattttagacaacttgtacgt 2547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 63 - 184
Target Start/End: Complemental strand, 12661 - 12547
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       ||||||||||||||  |    
T  12661 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaaagttgtgttg 12569  T
Q  163 tgatttagtgagggacaaaaat 184  Q
    || ||| |||||||||||||||    
T  12568 tggtttggtgagggacaaaaat 12547  T

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Target: scaffold0169; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 63 - 184
Target Start/End: Complemental strand, 18179 - 18065
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    ||||| |||||| |||| |||||||||||||   |||||||| | ||| || |||||||||||||||||||||| |       ||||||||||||||  |    
T  18179 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgg-------gacaaaaagttgtgttg 18087  T
Q  163 tgatttagtgagggacaaaaat 184  Q
    || ||| |||||||||||||||    
T  18086 tggtttggtgagggacaaaaat 18065  T

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Target: scaffold0025 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 63 - 266
Target Start/End: Complemental strand, 5565 - 5367
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    |||||||||||| |||| ||||||||||||| | |  | ||| ||||| |||||||||||| ||||||||| || |       ||||||||||||||  |    
T  5565 attgaataattttttgttttatacgatttttggggctcgaaatgttatttttgtattttaggcaacttgtatgtgg-------gacaaaaagttgtgatg 5473  T
Q  163 tgatttagtgagggacaaaaat-tctg-tttttgtcatatcaattgtcttcggtttgtcctgtccctaaagcagttttataaatcaaacaatatacaact 260  Q
    || ||| ||||||||||||||| | || |||||||| | ||  ||| || | ||||||| ||| ||| || |||||||| |||||||||| |  ||||||    
T  5472 tggtttggtgagggacaaaaatatgtgttttttgtcctgtcccttgcctccagtttgtcttgtacctgaaacagttttacaaatcaaacactggacaact 5373  T

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Target: scaffold0098 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 184
Target Start/End: Original strand, 51410 - 51523
Alignment:
Q  63 attgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgtacgtagataaatagacaaaaagttgtgcag 162  Q
    ||||| |||||| |||| |||||||||||||   |||||||| | ||| ||  ||||||||||||||||||||| |       ||||||||||||||| |    
T  51410 attgagtaattttttgttttatacgatttttgagggacaaaatgctattttgatattttagacaacttgtacgtgg-------gacaaaaagttgtgctg 51502  T
Q  163 tgatttagtgagggacaaaaat 184  Q
    || ||| |||||||||||||||    
T  51503 tggttt-gtgagggacaaaaat 51523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 3754 - 3683
Alignment:
Q  62 tattgaataatttgttgtcttatacgattttttgtggacaaaaggttatatttgtattttagacaacttgta 133  Q
    ||||||||||||| || ||||||| ||||||| ||||| ||||   ||| ||||||||||||| ||||||||    
T  3754 tattgaataattttttatcttatatgatttttggtggataaaaaactatttttgtattttagataacttgta 3683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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