View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17010_low_7 (Length: 514)

Name: NF17010_low_7
Description: NF17010
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17010_low_7
NF17010_low_7
[»] chr1 (56 HSPs)
chr1 (118-504)||(5179238-5179627)
chr1 (214-391)||(39864094-39864273)
chr1 (44-159)||(52009372-52009487)
chr1 (229-391)||(16395003-16395165)
chr1 (227-391)||(49223942-49224107)
chr1 (227-392)||(31978607-31978773)
chr1 (216-374)||(9307612-9307772)
chr1 (214-384)||(12039065-12039237)
chr1 (229-387)||(2572468-2572626)
chr1 (222-391)||(11449877-11450045)
chr1 (227-393)||(38787338-38787505)
chr1 (227-380)||(26093391-26093545)
chr1 (227-379)||(917021-917174)
chr1 (216-391)||(24991609-24991786)
chr1 (227-350)||(7759212-7759336)
chr1 (227-388)||(20209799-20209961)
chr1 (44-93)||(5179630-5179679)
chr1 (227-391)||(40144803-40144968)
chr1 (1-49)||(5179697-5179745)
chr1 (229-344)||(8896335-8896451)
chr1 (227-380)||(15699119-15699274)
chr1 (228-332)||(36701919-36702023)
chr1 (228-332)||(36718023-36718127)
chr1 (229-380)||(42409993-42410145)
chr1 (229-391)||(31042796-31042959)
chr1 (263-393)||(32970521-32970652)
chr1 (229-391)||(10495838-10496003)
chr1 (228-392)||(34031481-34031647)
chr1 (227-395)||(13579573-13579742)
chr1 (227-332)||(37276458-37276563)
chr1 (227-380)||(6160426-6160580)
chr1 (227-391)||(37506121-37506289)
chr1 (227-332)||(26257956-26258061)
chr1 (229-342)||(27721531-27721644)
chr1 (227-391)||(52429341-52429506)
chr1 (287-374)||(23168966-23169054)
chr1 (214-332)||(14757610-14757729)
chr1 (237-331)||(6023666-6023760)
chr1 (287-392)||(35682761-35682866)
chr1 (256-391)||(41121778-41121917)
chr1 (214-278)||(6785239-6785304)
chr1 (239-363)||(28749000-28749125)
chr1 (227-380)||(33733230-33733383)
chr1 (231-390)||(45331339-45331502)
chr1 (227-279)||(25089155-25089207)
chr1 (227-279)||(35367799-35367851)
chr1 (1-49)||(52009499-52009547)
chr1 (214-332)||(44707776-44707895)
chr1 (231-324)||(24880874-24880970)
chr1 (287-391)||(27687298-27687404)
chr1 (466-504)||(52009260-52009298)
chr1 (229-278)||(22856307-22856356)
chr1 (228-332)||(31154126-31154230)
chr1 (287-380)||(6267823-6267917)
chr1 (227-277)||(37539124-37539174)
chr1 (229-277)||(4441674-4441722)
[»] chr5 (39 HSPs)
chr5 (227-392)||(7827876-7828042)
chr5 (227-391)||(6315728-6315893)
chr5 (229-365)||(8724986-8725123)
chr5 (227-391)||(40899915-40900080)
chr5 (214-391)||(8698292-8698471)
chr5 (228-380)||(27542793-27542946)
chr5 (227-391)||(40530175-40530340)
chr5 (214-362)||(41496063-41496213)
chr5 (227-372)||(6753629-6753774)
chr5 (227-391)||(4818548-4818713)
chr5 (229-332)||(27580599-27580702)
chr5 (229-378)||(21060629-21060779)
chr5 (227-324)||(6754026-6754123)
chr5 (227-398)||(1248548-1248720)
chr5 (227-369)||(2232046-2232185)
chr5 (214-374)||(31655036-31655198)
chr5 (227-332)||(22848395-22848500)
chr5 (287-374)||(9515803-9515891)
chr5 (229-332)||(4441020-4441123)
chr5 (312-393)||(843519-843601)
chr5 (227-391)||(41478824-41478989)
chr5 (263-391)||(32440174-32440303)
chr5 (264-391)||(38508138-38508266)
chr5 (227-388)||(11904202-11904365)
chr5 (227-391)||(30512636-30512802)
chr5 (227-391)||(30552976-30553142)
chr5 (227-391)||(41492299-41492464)
chr5 (227-332)||(29374339-29374444)
chr5 (228-364)||(42803598-42803735)
chr5 (229-369)||(15818453-15818596)
chr5 (228-385)||(29570390-29570548)
chr5 (287-375)||(37184046-37184135)
chr5 (227-279)||(19929943-19929995)
chr5 (354-391)||(5282467-5282504)
chr5 (287-332)||(5731833-5731878)
chr5 (239-364)||(29856056-29856180)
chr5 (316-392)||(42922818-42922894)
chr5 (355-391)||(2588019-2588055)
chr5 (240-300)||(38161455-38161515)
[»] chr3 (45 HSPs)
chr3 (227-391)||(37695618-37695784)
chr3 (227-392)||(19823008-19823174)
chr3 (227-380)||(30190624-30190778)
chr3 (227-391)||(36476581-36476746)
chr3 (214-364)||(43253843-43253995)
chr3 (229-391)||(29023919-29024081)
chr3 (214-391)||(36460369-36460548)
chr3 (214-391)||(44301545-44301724)
chr3 (228-392)||(37311948-37312113)
chr3 (231-380)||(24569064-24569214)
chr3 (239-391)||(38795353-38795506)
chr3 (214-391)||(8679007-8679186)
chr3 (227-380)||(10366606-10366767)
chr3 (227-375)||(12736541-12736690)
chr3 (227-391)||(5322892-5323055)
chr3 (229-380)||(11905821-11905973)
chr3 (227-380)||(45710847-45711001)
chr3 (229-393)||(37497491-37497656)
chr3 (263-385)||(49830162-49830286)
chr3 (214-393)||(51837911-51838091)
chr3 (227-392)||(1778640-1778805)
chr3 (229-366)||(28690760-28690898)
chr3 (237-378)||(43719274-43719415)
chr3 (229-389)||(19611908-19612068)
chr3 (229-363)||(11632080-11632214)
chr3 (227-364)||(37772944-37773082)
chr3 (227-332)||(23004395-23004500)
chr3 (227-327)||(39043772-39043875)
chr3 (228-393)||(3313252-3313414)
chr3 (237-375)||(14194563-14194701)
chr3 (241-363)||(34750507-34750630)
chr3 (214-279)||(12904847-12904913)
chr3 (227-380)||(53560214-53560368)
chr3 (229-364)||(27471334-27471470)
chr3 (287-374)||(31158492-31158579)
chr3 (304-374)||(33491053-33491124)
chr3 (316-393)||(17652834-17652912)
chr3 (229-380)||(19609298-19609450)
chr3 (229-308)||(30682103-30682182)
chr3 (229-374)||(38137413-38137562)
chr3 (227-391)||(49447747-49447909)
chr3 (227-332)||(3901162-3901267)
chr3 (291-395)||(50035166-50035271)
chr3 (227-279)||(17652749-17652801)
chr3 (304-336)||(37804898-37804930)
[»] chr7 (55 HSPs)
chr7 (231-391)||(34947508-34947669)
chr7 (229-369)||(24516271-24516412)
chr7 (228-393)||(83390-83556)
chr7 (213-391)||(26974015-26974198)
chr7 (214-393)||(28103723-28103904)
chr7 (228-392)||(28202268-28202433)
chr7 (227-393)||(9785992-9786159)
chr7 (216-392)||(11373387-11373565)
chr7 (227-391)||(34100507-34100672)
chr7 (287-391)||(44180269-44180374)
chr7 (229-391)||(7463219-7463382)
chr7 (214-374)||(21350605-21350764)
chr7 (214-380)||(16904369-16904537)
chr7 (227-369)||(3178186-3178329)
chr7 (228-362)||(41506054-41506189)
chr7 (227-380)||(759062-759216)
chr7 (214-374)||(22738691-22738853)
chr7 (214-374)||(46478270-46478432)
chr7 (239-391)||(5524396-5524549)
chr7 (229-364)||(30865973-30866109)
chr7 (228-391)||(23670491-23670654)
chr7 (227-369)||(32346034-32346177)
chr7 (227-375)||(2459475-2459622)
chr7 (228-381)||(27920993-27921147)
chr7 (237-369)||(21759966-21760099)
chr7 (229-364)||(38391754-38391890)
chr7 (227-392)||(40076322-40076485)
chr7 (229-391)||(13961965-13962128)
chr7 (243-393)||(16560528-16560679)
chr7 (243-393)||(16604983-16605134)
chr7 (269-391)||(39452390-39452512)
chr7 (259-380)||(42935697-42935819)
chr7 (227-391)||(21390299-21390466)
chr7 (227-303)||(25571423-25571499)
chr7 (229-363)||(49101669-49101807)
chr7 (227-369)||(19271715-19271858)
chr7 (227-330)||(32018734-32018837)
chr7 (227-332)||(32018935-32019041)
chr7 (227-332)||(33819218-33819323)
chr7 (229-332)||(43873929-43874032)
chr7 (214-374)||(7457398-7457560)
chr7 (227-337)||(37245694-37245803)
chr7 (316-393)||(46211524-46211602)
chr7 (262-394)||(2850838-2850971)
chr7 (227-279)||(6495007-6495059)
chr7 (229-324)||(17828379-17828473)
chr7 (237-279)||(35333057-35333099)
chr7 (299-363)||(12631381-12631446)
chr7 (354-391)||(36790878-36790915)
chr7 (227-279)||(42796009-42796064)
chr7 (256-308)||(21937831-21937883)
chr7 (227-279)||(36790744-36790796)
chr7 (287-380)||(37850700-37850791)
chr7 (227-279)||(44424148-44424200)
chr7 (214-277)||(47045546-47045610)
[»] chr8 (38 HSPs)
chr8 (228-391)||(10179901-10180065)
chr8 (220-391)||(34948641-34948813)
chr8 (227-394)||(31271018-31271186)
chr8 (228-332)||(42886998-42887102)
chr8 (260-380)||(51143-51263)
chr8 (229-391)||(11976890-11977053)
chr8 (214-332)||(44761508-44761627)
chr8 (229-380)||(17719223-17719375)
chr8 (229-399)||(27294005-27294176)
chr8 (227-392)||(39482612-39482778)
chr8 (227-391)||(9300067-9300232)
chr8 (232-364)||(21216082-21216215)
chr8 (214-380)||(7172897-7173065)
chr8 (227-394)||(40996316-40996484)
chr8 (229-391)||(10097945-10098108)
chr8 (227-380)||(32476284-32476438)
chr8 (262-369)||(1875568-1875676)
chr8 (231-393)||(13335217-13335380)
chr8 (259-363)||(42972490-42972595)
chr8 (228-332)||(5053167-5053271)
chr8 (227-393)||(39405759-39405926)
chr8 (214-391)||(45425620-45425799)
chr8 (229-382)||(4428315-4428468)
chr8 (227-279)||(29226595-29226647)
chr8 (229-391)||(31082618-31082781)
chr8 (228-279)||(32678401-32678452)
chr8 (316-382)||(32678804-32678871)
chr8 (229-331)||(17823920-17824022)
chr8 (227-391)||(31231727-31231893)
chr8 (287-376)||(36967418-36967508)
chr8 (227-332)||(396625-396730)
chr8 (287-394)||(2767242-2767350)
chr8 (287-389)||(39300894-39301000)
chr8 (264-332)||(41092028-41092096)
chr8 (287-373)||(7703128-7703215)
chr8 (227-332)||(22771849-22771954)
chr8 (228-301)||(35732119-35732192)
chr8 (312-391)||(6611779-6611859)
[»] chr4 (55 HSPs)
chr4 (229-391)||(38405061-38405224)
chr4 (227-392)||(49428300-49428466)
chr4 (229-386)||(2653419-2653575)
chr4 (227-391)||(33790690-33790855)
chr4 (228-392)||(52247386-52247551)
chr4 (214-392)||(32884784-32884964)
chr4 (214-391)||(17237255-17237434)
chr4 (214-391)||(47464324-47464503)
chr4 (229-394)||(11907555-11907721)
chr4 (227-391)||(36985783-36985948)
chr4 (227-391)||(47772978-47773143)
chr4 (227-392)||(49175892-49176058)
chr4 (227-391)||(7061623-7061788)
chr4 (214-392)||(34360638-34360818)
chr4 (237-392)||(52859757-52859913)
chr4 (229-391)||(11288589-11288751)
chr4 (229-391)||(5841386-5841550)
chr4 (229-395)||(2066788-2066955)
chr4 (229-391)||(17114439-17114602)
chr4 (227-391)||(16821290-16821455)
chr4 (214-392)||(6643618-6643798)
chr4 (287-380)||(51625140-51625234)
chr4 (228-391)||(6609759-6609924)
chr4 (228-357)||(35380326-35380456)
chr4 (228-378)||(42616875-42617026)
chr4 (262-362)||(42517626-42517727)
chr4 (237-393)||(44536153-44536310)
chr4 (227-360)||(49746958-49747091)
chr4 (229-364)||(35311209-35311345)
chr4 (227-374)||(39397341-39397489)
chr4 (228-391)||(43237241-43237405)
chr4 (263-385)||(28500856-28500979)
chr4 (257-375)||(30192232-30192351)
chr4 (232-397)||(2942598-2942763)
chr4 (229-391)||(22130042-22130209)
chr4 (289-375)||(27880217-27880303)
chr4 (230-391)||(53346759-53346921)
chr4 (227-332)||(21240723-21240828)
chr4 (228-391)||(38502441-38502605)
chr4 (227-374)||(40122830-40122978)
chr4 (227-279)||(51624783-51624835)
chr4 (228-279)||(18741546-18741597)
chr4 (227-388)||(461955-462117)
chr4 (287-380)||(8175550-8175644)
chr4 (229-370)||(30682176-30682318)
chr4 (227-329)||(50264102-50264204)
chr4 (265-364)||(46396869-46396969)
chr4 (265-391)||(4972595-4972722)
chr4 (239-376)||(3689571-3689709)
chr4 (227-333)||(47358967-47359073)
chr4 (229-278)||(31370373-31370422)
chr4 (287-391)||(32469907-32470012)
chr4 (265-369)||(52869107-52869212)
chr4 (227-279)||(19265805-19265857)
chr4 (316-375)||(25141889-25141949)
[»] scaffold0110 (1 HSPs)
scaffold0110 (227-392)||(1701-1867)
[»] chr6 (27 HSPs)
chr6 (227-391)||(11655898-11656063)
chr6 (228-393)||(13087528-13087694)
chr6 (228-393)||(29363304-29363470)
chr6 (227-374)||(181553-181700)
chr6 (222-391)||(23142659-23142829)
chr6 (227-391)||(6801928-6802093)
chr6 (227-391)||(15058114-15058279)
chr6 (222-380)||(1955942-1956101)
chr6 (215-380)||(3291731-3291898)
chr6 (229-392)||(21010172-21010340)
chr6 (216-364)||(1781789-1781937)
chr6 (229-393)||(6834319-6834484)
chr6 (216-374)||(3720210-3720370)
chr6 (227-392)||(31894161-31894327)
chr6 (227-348)||(24983444-24983566)
chr6 (240-392)||(32440596-32440749)
chr6 (228-363)||(13909422-13909558)
chr6 (227-392)||(15582280-15582446)
chr6 (229-279)||(34657627-34657677)
chr6 (239-332)||(1063615-1063708)
chr6 (227-308)||(11143623-11143704)
chr6 (228-308)||(30716898-30716978)
chr6 (227-278)||(15046121-15046171)
chr6 (227-332)||(1225045-1225149)
chr6 (287-332)||(4590610-4590655)
chr6 (230-279)||(5302351-5302400)
chr6 (227-279)||(13206897-13206949)
[»] scaffold0330 (1 HSPs)
scaffold0330 (229-391)||(5389-5552)
[»] chr2 (41 HSPs)
chr2 (227-380)||(39691487-39691641)
chr2 (227-386)||(45235578-45235738)
chr2 (229-395)||(16463688-16463855)
chr2 (227-380)||(37322425-37322580)
chr2 (222-371)||(16805873-16806023)
chr2 (222-371)||(16845154-16845304)
chr2 (227-391)||(25637478-25637642)
chr2 (214-363)||(5789627-5789778)
chr2 (214-391)||(17695313-17695492)
chr2 (227-392)||(39785582-39785751)
chr2 (227-395)||(36794281-36794450)
chr2 (227-394)||(14523320-14523488)
chr2 (227-393)||(15359036-15359203)
chr2 (214-332)||(35313870-35313989)
chr2 (312-393)||(26607917-26607999)
chr2 (231-380)||(43410427-43410577)
chr2 (229-392)||(36354393-36354557)
chr2 (237-371)||(43115773-43115908)
chr2 (227-332)||(8947063-8947168)
chr2 (287-375)||(19937734-19937823)
chr2 (229-349)||(17346356-17346476)
chr2 (227-370)||(31448665-31448809)
chr2 (228-386)||(34120395-34120552)
chr2 (227-278)||(5272204-5272255)
chr2 (229-364)||(16377634-16377774)
chr2 (229-331)||(35242309-35242411)
chr2 (228-374)||(3323254-3323387)
chr2 (227-332)||(43699610-43699712)
chr2 (229-279)||(26863422-26863472)
chr2 (229-279)||(39329728-39329777)
chr2 (227-279)||(9458330-9458382)
chr2 (227-375)||(18853167-18853317)
chr2 (354-393)||(5272142-5272181)
chr2 (348-391)||(30544402-30544445)
chr2 (287-393)||(32783421-32783527)
chr2 (227-365)||(34225587-34225726)
chr2 (229-279)||(19937384-19937434)
chr2 (229-279)||(32831239-32831289)
chr2 (310-391)||(39443793-39443875)
chr2 (227-272)||(7494909-7494954)
chr2 (227-279)||(11742592-11742644)
[»] scaffold0182 (1 HSPs)
scaffold0182 (231-391)||(20306-20467)
[»] scaffold0159 (1 HSPs)
scaffold0159 (214-363)||(34000-34151)
[»] scaffold0583 (1 HSPs)
scaffold0583 (227-391)||(2022-2187)
[»] scaffold1809 (1 HSPs)
scaffold1809 (214-332)||(697-816)
[»] scaffold1391 (1 HSPs)
scaffold1391 (287-393)||(1768-1875)
[»] scaffold0302 (1 HSPs)
scaffold0302 (227-392)||(16095-16261)
[»] scaffold0095 (1 HSPs)
scaffold0095 (227-393)||(50201-50368)
[»] scaffold0328 (1 HSPs)
scaffold0328 (227-387)||(7938-8099)
[»] scaffold0294 (1 HSPs)
scaffold0294 (292-391)||(17097-17197)
[»] scaffold0018 (1 HSPs)
scaffold0018 (229-391)||(135990-136153)
[»] scaffold0012 (1 HSPs)
scaffold0012 (227-332)||(105681-105786)
[»] scaffold0011 (1 HSPs)
scaffold0011 (217-279)||(14234-14297)
[»] scaffold0470 (1 HSPs)
scaffold0470 (312-391)||(1067-1147)


Alignment Details
Target: chr1 (Bit Score: 237; Significance: 1e-131; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 118 - 504
Target Start/End: Complemental strand, 5179627 - 5179238
Alignment:
Q  118 tattccaccatcgccgccgatgccattgctcgctttcaggta----ttcatgatttcaccaaaatttgtccaactaattgtcactttattannnnnnnnc 213  Q
    ||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||| ||              
T  5179627 tattccaccatcgccgccgatgccattgctcgctttcaggtacctattcatgatttcaccaaaatttgtccaactaattgtcactttttttt-------- 5179536  T
Q  214 ttcc-actgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgct 311  Q
    |||| |||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||||||||||    
T  5179535 ttccgactgttatactcttatttcctgaatttcatccaatttatctactccactaactacaattaatatgaaaactttagtaaatgatactcattttgct 5179436  T
Q  312 attgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtattatctaactttcatgggt 410  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||    
T  5179435 attgaaatcaacacaattaatcattttgttaagaatcgtgtacaaaccttaaacgactgttatttagagatggagggagtattatctaactttcgtgggt 5179336  T
Q  411 tagtttggtttctt----nnnnnnnnntctaacttaggaattttaatttcgttatatgaaatttgacagcggcttttgggaaagaaagttatattcat 504  Q
    ||||||||||||||             ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5179335 tagtttggtttcttaaaaaaaaaaaaatctaacttagggattttaatttcgttatatgaaatttgacagcggcttttgggaaagaaagttatattcat 5179238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 214 - 391
Target Start/End: Original strand, 39864094 - 39864273
Alignment:
Q  214 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| ||||||| ||||||| |||||||||||||| ||| |||||||||||||||||||||||| | | | ||||||||||| |||| ||||| | |    
T  39864094 ttccactattatacccttatttattgaatttcatccaacttaactactccactaactacaattaataagagtattttagtaaatgctactaattttacca 39864193  T
Q  313 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||||||||||||||||||| ||||  |||| ||||||| |||||| |||||| ||||| ||||||||| ||||||||||    
T  39864194 ttgaaatcaacacaattaatcatttccttaataatcgtgcacaaactttaaacgactataatttagagacggagggagta 39864273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 44 - 159
Target Start/End: Complemental strand, 52009487 - 52009372
Alignment:
Q  44 caaatgacgacgaaccctatgtcatcacaacccctctttactacgtcaacgcccctccccatatgggtagcgcttattccaccatcgccgccgatgccat 143  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||| ||||| |||||    
T  52009487 caaatgatgaccaaccctatgtcatcacaacccctctttactacgttaacgcccctcctcatatgggtagcgcctattccactatcgctgccgacgccat 52009388  T
Q  144 tgctcgctttcaggta 159  Q
    ||||||||||||||||    
T  52009387 tgctcgctttcaggta 52009372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 229 - 391
Target Start/End: Complemental strand, 16395165 - 16395003
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| ||||||||||| || ||| |||||||||||||||||||||| | | | | |||||||||||||||| ||||| ||||  |||||||||||||    
T  16395165 ttatttattgaatttcatctaacttaactactccactaactacaattaaaaag-gtattttagtaaatgatactaattttactatcaaaatcaacacaat 16395067  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||| ||||| |||| ||||||| | ||||||||||| |||||| || | ||| ||||||||||    
T  16395066 taatcattttcttaataatcgtgcataaaccttaaacgactatttttaaaagacggagggagta 16395003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 227 - 391
Target Start/End: Complemental strand, 49224107 - 49223942
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||| ||||||||| ||| |||||||||||||||||||||||| | |   |||||||||||||||| ||||| | ||  |||||||||||    
T  49224107 ccttatttattgaacttcatccaacttaactactccactaactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacaca 49224008  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||||| ||||| |||  || |||| |  || ||||||| ||||||||||||||| ||||||||||    
T  49224007 attaatcattttcttagtaaccgtgcatcaatcttaaacgactattatttagagacggagggagta 49223942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 227 - 392
Target Start/End: Complemental strand, 31978773 - 31978607
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| ||||||| || ||| ||| |||||||| |||||| |||||||| |   | |||||||| ||||| | ||||| | |||||||||||||||    
T  31978773 ccttatttaatgaatttaattcaacttaactactccattaactataattaataagaatagtttagtaagtgatattaattttaccattgaaatcaacaca 31978674  T
Q  327 attaatattttg-ttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 392  Q
    |||||| ||||  |||| ||||||| |||||| |||||| ||||| ||||||||| |||||||||||    
T  31978673 attaatctttttcttaataatcgtgcacaaactttaaacgactataatttagagacggagggagtat 31978607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 374
Target Start/End: Original strand, 9307612 - 9307772
Alignment:
Q  216 ccactgttatacctt-atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctatt 314  Q
    ||||| ||||||||| ||||| |||||||||||||| ||| |||||||||||||||||||||| | | |   ||||||||||| || | |||||   |||    
T  9307612 ccactattatacctttatttattgaatttcatccaacttaactactccactaactacaattaacaagggtgttttagtaaatgctattaattttatcatt 9307711  T
Q  315 gaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 374  Q
    |||||||||||| ||||| ||||  |||| ||||||||||||||||||||| |||| ||||    
T  9307712 gaaatcaacacagttaatcatttccttaataatcgtgtacaaaccttaaacgactaatatt 9307772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 214 - 384
Target Start/End: Original strand, 12039065 - 12039237
Alignment:
Q  214 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| ||||||| ||||||| |||||| ||||||| |||  ||||||| ||||||||||||||| | |    |||||||||| |||| ||||| | |    
T  12039065 ttccactattatacccttatttattgaattacatccaacttaaatactccattaactacaattaataagagtgtattagtaaatgttactaattttacca 12039164  T
Q  313 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatgga 384  Q
    |||||||||||||||||||| ||||  |||| ||||||| ||||||||||||| |||| ||||  ||||||||    
T  12039165 ttgaaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgactaatattgtgagatgga 12039237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 229 - 387
Target Start/End: Original strand, 2572468 - 2572626
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| |||||||||| ||| ||| ||||||||||||||||||||||||  || | |||||||||||||| | ||||| | ||||||||||| |||||    
T  2572468 ttatttattgaatttcattcaacttaactactccactaactacaattaataattgta-tttagtaaatgatattaattttaccattgaaatcaatacaat 2572566  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggaggg 387  Q
    |||| ||| | |||| ||||||  |||||| |||||| ||||| ||||| ||| ||||||    
T  2572567 taatcattattttaataatcgtacacaaactttaaacgactataatttaaagacggaggg 2572626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 222 - 391
Target Start/End: Original strand, 11449877 - 11450045
Alignment:
Q  222 ttataccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatca 321  Q
    |||||||||||||| |||||||||||||||||  |||||| | |||||||||||||||  ||   | ||| |||| ||  | ||||| | ||||||||||    
T  11449877 ttataccttatttattgaatttcatccaattttactactctattaactacaattaataaatgtgttatagaaaattat--taattttaccattgaaatca 11449974  T
Q  322 acacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    ||| ||||||  ||||  |||| ||||||| ||||||||||||||||||||||||||||| ||| ||||||    
T  11449975 acataattaaccatttccttaataatcgtgcacaaaccttaaacaactattatttagagacggaaggagta 11450045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 227 - 393
Target Start/End: Original strand, 38787338 - 38787505
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||||||||||| ||||||||||||||| |||||||| |     ||| | ||||||||||  |||| | ||  |||||||||||    
T  38787338 ccttatttattgaatttcatccaatttaactactccactaactataattaataaggatgttttggcaaatgatactagttttaccatcaaaatcaacaca 38787437  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 393  Q
    || ||| ||||  |||| ||||||| | ||||||||||| ||||||||||||||| || |||||||||    
T  38787438 atcaatcatttccttaataatcgtgcataaaccttaaacgactattatttagagacggggggagtatt 38787505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 227 - 380
Target Start/End: Original strand, 26093391 - 26093545
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||| |||||| || |||  |||| |||||||||||||||||| |   | |||| ||||||||| | ||||| | |||||||||||||||    
T  26093391 ccttatttattgaacttcatctaacttaattacttcactaactacaattaataaggatattttaataaatgatattaattttaccattgaaatcaacaca 26093490  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 380  Q
    |||||| ||||| |||| ||||||| ||||| ||||||| || ||||||||||||    
T  26093491 attaatcattttcttaataatcgtgcacaaatcttaaacgaccattatttagaga 26093545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 227 - 379
Target Start/End: Original strand, 917021 - 917174
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| | |||||||| ||| ||| ||| || ||||||||||||||||| | | | |||||||||||||| | ||||| | ||| ||||||||| |    
T  917021 ccttatttattaaatttcatgcaacttaactaatctactaactacaattaataagggtattttagtaaatgatattaattttaccatttaaatcaacata 917120  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagag 379  Q
    |||||| ||||  |||| ||||||| ||||||||||||| ||||| ||||||||    
T  917121 attaatcatttatttaataatcgtgcacaaaccttaaacgactataatttagag 917174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 216 - 391
Target Start/End: Complemental strand, 24991786 - 24991609
Alignment:
Q  216 ccactgttatacctt-atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctatt 314  Q
    ||||| ||||||||| ||||| |||||||||||||| ||| ||| ||||||||||||||||||||   |   | ||||||||  || | ||||| |  ||    
T  24991786 ccactattatacctttatttattgaatttcatccaacttaactattccactaactacaattaataaaggtgttgtagtaaatactattaattttaccgtt 24991687  T
Q  315 gaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||||||||||||||||| ||||  |||| ||||||||||||||||||||| |||| ||||  |||| ||||||||||    
T  24991686 gaaatcaacacaattaatcatttccttaataatcgtgtacaaaccttaaacgactaatattgtgagacggagggagta 24991609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 227 - 350
Target Start/End: Original strand, 7759212 - 7759336
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||| ||| ||| ||| |||||||||||||||||||| | | | |||||||||||||| | ||||  | |||||||||||||||    
T  7759212 ccttatttattgaatttcattcaacttaactattccactaactacaattaataagagtattttagtaaatgatattaatttcaccattgaaatcaacaca 7759311  T
Q  327 attaa-tattttgttaagaatcgtg 350  Q
    ||||| |||||| |||| |||||||    
T  7759312 attaattatttttttaataatcgtg 7759336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 227 - 388
Target Start/End: Complemental strand, 20209961 - 20209799
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||| ||||||||| ||| |||||||||||||||||||||||| |     |||||||||||||||| ||||| ||||  ||||||||| |    
T  20209961 ccttatttattgaacttcatccaacttaactactccactaactacaattaataaggatgttttagtaaatgatactaattttactatcaaaatcaacata 20209862  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggaggga 388  Q
    |||||| ||||| |||| ||  ||| |  | | |||||| ||||||||||||||| |||||||    
T  20209861 attaatcattttcttaataacggtgcatcacctttaaacgactattatttagagacggaggga 20209799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 5179679 - 5179630
Alignment:
Q  44 caaatgacgacgaaccctatgtcatcacaacccctctttactacgtcaac 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5179679 caaatgacgacgaaccctatgtcatcacaacccctctttactacgtcaac 5179630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 227 - 391
Target Start/End: Complemental strand, 40144968 - 40144803
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||| ||||||||| ||| |||||||| ||||||||||||||| | |   |||||||||||||| | ||||| | ||  |||||||||||    
T  40144968 ccttatttattgaacttcatccaacttaactactccattaactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacaca 40144869  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||||| ||||| |||| ||  ||| |  || ||| ||| |||||||||||||||| |||||||||    
T  40144868 attaatcattttcttaataactgtgcatcaatcttgaacgactattatttagagattgagggagta 40144803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 5179745 - 5179697
Alignment:
Q  1 cctatttccatttcccttcttctccaagagcagctttgttctgcaaatg 49  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5179745 cctatttccatttcccttcttctccaagagcagctttgttctgcaaatg 5179697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 229 - 344
Target Start/End: Complemental strand, 8896451 - 8896335
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| |||||||||||||| ||| | ||||||||||||||||||||||  |  | |||||||||||||| | ||||| | |||||||||||||||||    
T  8896451 ttatttattgaatttcatccaacttaaccactccactaactacaattaataaatatattttagtaaatgatattaattttaccattgaaatcaacacaat 8896352  T
Q  329 taat-attttgttaaga 344  Q
     ||| ||||| ||||||    
T  8896351 caatcattttcttaaga 8896335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 227 - 380
Target Start/End: Original strand, 15699119 - 15699274
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||| ||||||||| ||| |||||||||||||||||||||||| | |   |||||||||||||| | ||||| | ||  |||||||||||    
T  15699119 ccttatttattgaacttcatccaacttaactactccactaactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacaca 15699218  T
Q  327 attaat--attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 380  Q
    ||||||   |||| |||| ||  ||| |  |||||||||| |||||||||||||||    
T  15699219 attaatcatttttcttaataactgtgcatcaaccttaaacgactattatttagaga 15699274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 228 - 332
Target Start/End: Original strand, 36701919 - 36702023
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    |||||||| ||||||||||| || ||| | | |||||||||||||||||||| | | | |||||||||||||||| ||||| | ||||||||||||| ||    
T  36701919 cttatttattgaatttcatcaaacttaacgattccactaactacaattaataagggcattttagtaaatgatactaattttaccattgaaatcaacataa 36702018  T
Q  328 ttaat 332  Q
    |||||    
T  36702019 ttaat 36702023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 228 - 332
Target Start/End: Original strand, 36718023 - 36718127
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    |||||||| ||||||||||| || ||| | | |||||||||||||||||||| | | | |||||||||||||||| ||||| | ||||||||||||| ||    
T  36718023 cttatttattgaatttcatcaaacttaacgattccactaactacaattaataagggcattttagtaaatgatactaattttaccattgaaatcaacataa 36718122  T
Q  328 ttaat 332  Q
    |||||    
T  36718123 ttaat 36718127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 229 - 380
Target Start/End: Original strand, 42409993 - 42410145
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| |||| ||||||| | ||| |||  | ||||||||||||||||| | |  ||||||||||||||| | ||||| | ||  |||||||||||||    
T  42409993 ttatttattgaacttcatcctacttaactatccaactaactacaattaataagggtgctttagtaaatgatattaattttaccatcaaaatcaacacaat 42410092  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 380  Q
    |||| ||||| |||| || |||| |  ||||||||||||||||||||||||||    
T  42410093 taatcatttttttaataaccgtgcatcaaccttaaacaactattatttagaga 42410145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 229 - 391
Target Start/End: Original strand, 31042796 - 31042959
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| |||||||||| ||| |||  |||| ||||| |||||||||||| | | | |  ||||||||||||| ||||| | |||||||||||||||||    
T  31042796 ttatttattgaatttcattcaacttaattacttcactacctacaattaataagggtattacagtaaatgatactaattttaccattgaaatcaacacaat 31042895  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||| ||||  |||| |||| || ||||||||||||  |||| ||||  |||| ||||||||||    
T  31042896 taatcatttccttaataatcatgcacaaaccttaaatgactaatattgtgagacggagggagta 31042959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 263 - 393
Target Start/End: Complemental strand, 32970652 - 32970521
Alignment:
Q  263 actaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaacctta 361  Q
    |||||| |||||||||| | | | |||||||||| ||| | |||||   ||||||||||||||||||||| ||||| |||| |||||| ||| |||||||    
T  32970652 actaacaacaattaatacgagtattttagtaaataatattaattttatcattgaaatcaacacaattaatcattttcttaataatcgtatacgaacctta 32970553  T
Q  362 aacaactattatttagagatggagggagtatt 393  Q
    ||| | |||||||| ||||| |||||||||||    
T  32970552 aacgaatattattttgagatagagggagtatt 32970521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 229 - 391
Target Start/End: Original strand, 10495838 - 10496003
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaat-atgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    ||||||| |||||||||||||| ||| |||||||||||| |||||||||| | |||   |||||||||||||||| ||||| | ||  ||||||||| ||    
T  10495838 ttatttattgaatttcatccaacttaactactccactaattacaattaataaagtg--ttttagtaaatgatactaattttaccatcaaaatcaacaaaa 10495935  T
Q  328 ttaat-attttgttaagaatcgtgtacaaaccttaaaca---actattatttagagatggagggagta 391  Q
    ||||| ||||| |||| |||| |  | ||||||||||||   | |||||||||||||| |||||||||    
T  10495936 ttaataatttttttaataatcttacataaaccttaaacaattagtattatttagagatagagggagta 10496003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 228 - 392
Target Start/End: Complemental strand, 34031647 - 34031481
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    |||||||| |||||||||| |||  |  ||| | ||||||||||||||||||   | | |||||||||||||| | ||||| | |||| |||||||||||    
T  34031647 cttatttattgaatttcattcaaccttactattacactaactacaattaataacggtattttagtaaatgatattaattttaccattggaatcaacacaa 34031548  T
Q  328 ttaat-attttgttaagaatcgtgtacaaaccttaaaca-actattatttagagatggagggagtat 392  Q
     |||| ||||  |||| |||| || |||||||||||||| ||||| ||||||||| |||||||||||    
T  34031547 gtaatcatttccttaataatcatgcacaaaccttaaacagactataatttagagacggagggagtat 34031481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 227 - 395
Target Start/End: Complemental strand, 13579742 - 13579573
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| ||||||||||| || |||  ||||||||||||||||||||||||| |   ||| |||||||||| | || |||  ||  |||||||||||    
T  13579742 ccttatttattgaatttcatcaaacttaaatactccactaactacaattaatatgggtgtttttgtaaatgatattaatattgtcatcaaaatcaacaca 13579643  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtattat 395  Q
    |||||| ||||  |||| |||| || | ||||||||||  | ||||| ||||||| ||| ||||||||||    
T  13579642 attaatcatttctttaataatcatgcataaaccttaaatgattattacttagagacggatggagtattat 13579573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 227 - 332
Target Start/End: Original strand, 37276458 - 37276563
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||||||||||| | |   ||||||||| |||||| ||||| | ||  |||||||||||    
T  37276458 ccttatttattgaatttcatccaatttaactattccactaactacaattaataagggtgttttagtaaacgatactaattttaccatcaaaatcaacaca 37276557  T
Q  327 attaat 332  Q
     |||||    
T  37276558 gttaat 37276563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 380
Target Start/End: Complemental strand, 6160580 - 6160426
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    |||| |||| |||||| ||| ||| ||| ||| |||| ||||||||||||||| | | | |||||||||| ||||| |||||   |||||||||||||||    
T  6160580 ccttgtttattgaattacattcaacttaactattccattaactacaattaataagagtattttagtaaataatactaattttatcattgaaatcaacaca 6160481  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 380  Q
    |||||| ||||| |||| ||||||  ||||  | ||||| |||||||||| ||||    
T  6160480 attaatcattttcttaaaaatcgtacacaagtcgtaaacgactattattttgaga 6160426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 37506121 - 37506289
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatga---tactcattttgctattgaaatcaac 323  Q
    ||||||||| |||||||||| ||| ||| ||||||||||||||||||||||||   |   ||||||||||||   |||| |||||   ||  ||||||||    
T  37506121 ccttatttattgaatttcattcaacttaactactccactaactacaattaataaaagtgttttagtaaatgatagtactaattttatcatcaaaatcaac 37506220  T
Q  324 acaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    ||||||||| ||||  |||| || |||| |  |||||||||| | ||||||||||||| ||||||||||    
T  37506221 acaattaatcatttccttaataaccgtgcatcaaccttaaacgattattatttagagacggagggagta 37506289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 332
Target Start/End: Complemental strand, 26258061 - 26257956
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||||||  |||||||||| |||  || || |||||| || |||||||   | | |||||||||||||| ||||||||||||||||||||| |||    
T  26258061 ccttatttactggttttcatccaacttaattattctactaaccacgattaataaaggtattttagtaaatgataatcattttgctattgaaatcaataca 26257962  T
Q  327 attaat 332  Q
    ||||||    
T  26257961 attaat 26257956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 342
Target Start/End: Original strand, 27721531 - 27721644
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| ||||||| |||||||||| ||| || ||||||||||||||||||  | |||||| ||||| | | | ||||| | ||| ||||||||||| |    
T  27721531 ttatttattgaattttatccaatttaactattctactaactacaattaatattggtactttaataaataaaaataattttaccattaaaatcaacacatt 27721630  T
Q  329 taatattttgttaa 342  Q
    ||||||||| ||||    
T  27721631 taatatttttttaa 27721644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 52429341 - 52429506
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||| ||| ||| |||||||||||||||||||||||| | | | |||| ||||||| | | | ||| | || | |||||||  |    
T  52429341 ccttatttaatgaatttcattcaacttaactactccactaactacaattaataagggtattttaataaatgacattaaatttaccatcgtaatcaaccaa 52429440  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||||| ||||  || | ||||||| ||||||||||||| |  || ||||||||| ||||||||||    
T  52429441 attaatcatttccttcataatcgtgcacaaaccttaaacgataataatttagagacggagggagta 52429506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 287 - 374
Target Start/End: Complemental strand, 23169054 - 23168966
Alignment:
Q  287 tttagtaaatgatactcattttgctattgaaatcaacacaattaa-tattttgttaagaatcgtgtacaaaccttaaacaactattatt 374  Q
    ||||||||||| |||| ||||| | |||||||||||||||||||| |||||| |||| ||||||| |||||| |||||| |||| ||||    
T  23169054 tttagtaaatgctactaattttaccattgaaatcaacacaattaattattttcttaataatcgtgcacaaactttaaacgactaatatt 23168966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 332
Target Start/End: Complemental strand, 14757729 - 14757610
Alignment:
Q  214 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| ||||||| ||||||| | ||||||||| || ||| ||||| |||||||||||||||||| | |   ||||||||||| |||| |||||        
T  14757729 ttccactattatacccttatttattaaatttcatcgaacttaactacttcactaactacaattaataagagtgttttagtaaatgttactaattttatcg 14757630  T
Q  313 ttgaaatcaacacaattaat 332  Q
    ||||||||||||||||||||    
T  14757629 ttgaaatcaacacaattaat 14757610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 237 - 331
Target Start/End: Complemental strand, 6023760 - 6023666
Alignment:
Q  237 tgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaa 331  Q
    |||||||||||||| ||| |||||||| |||||||||||||||   | | ||||||||| | |||| | ||| | ||||||||||||||||||||    
T  6023760 tgaatttcatccaacttaactactccaataactacaattaataaaggtattttagtaaaagctactaaatttaccattgaaatcaacacaattaa 6023666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 35682866 - 35682761
Alignment:
Q  287 tttagtaaatgatactcattttgctattgaaatcaacacaattaatatttt-gttaagaatcgtgtacaaaccttaaacaactattatttagagatggag 385  Q
    |||| ||||||||||| || ||   ||||||||||||||||||||| |||| ||||| ||||||| ||||||| || || |||||||||| ||||||||     
T  35682866 tttaataaatgatactaatgttatcattgaaatcaacacaattaatcttttcgttaaaaatcgtgcacaaacc-tatacgactattattttgagatggaa 35682768  T
Q  386 ggagtat 392  Q
    |||||||    
T  35682767 ggagtat 35682761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 256 - 391
Target Start/End: Complemental strand, 41121917 - 41121778
Alignment:
Q  256 ctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaatatttt----gttaagaatcgtgt 351  Q
    |||||||||||||||||||||||| | | | |||||||||| || || ||||| | ||  |||||||||||||||||  |||     |||| ||  |||     
T  41121917 ctactccactaactacaattaataagggtattttagtaaattatgctaattttaccatcaaaatcaacacaattaatcatttcctaattaataaatgtgc 41121818  T
Q  352 acaaaccttaaacaactattatttagagatggagggagta 391  Q
    | ||||||||||||||||||||||||||| ||| ||||||    
T  41121817 ataaaccttaaacaactattatttagagacggaaggagta 41121778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 214 - 278
Target Start/End: Original strand, 6785239 - 6785304
Alignment:
Q  214 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaat 278  Q
    ||||||| ||||||| ||||||| ||||||||||| || ||| |||||||||||||||||||||||    
T  6785239 ttccactattatacccttatttattgaatttcatcaaacttaactactccactaactacaattaat 6785304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 239 - 363
Target Start/End: Original strand, 28749000 - 28749125
Alignment:
Q  239 aatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-atttt 337  Q
    |||||||||||| ||| | | || ||||| ||||||||||| | |   ||||||||||| |||| ||||| | ||||||||||||||||||||| ||||     
T  28749000 aatttcatccaacttaacaattctactaattacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttc 28749099  T
Q  338 gttaagaatcgtgtacaaaccttaaa 363  Q
     |||| ||||||| ||||| ||||||    
T  28749100 cttaataatcgtgcacaaatcttaaa 28749125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 380
Target Start/End: Complemental strand, 33733383 - 33733230
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||| | |  || | |||| |||||||||||||||||   | | ||||||||||| || | ||||| | |||||||||||||||    
T  33733383 ccttatttattgaatttcattctacctaaccactctactaactacaattaataaaagtattttagtaaatgttaataattttaccattgaaatcaacaca 33733284  T
Q  327 attaatattttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 380  Q
    || |  ||||  |||| ||||||| |||||| |||||| ||||| |||| ||||    
T  33733283 ataatcatttccttaataatcgtgcacaaactttaaacgactataatttggaga 33733230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 390
Target Start/End: Original strand, 45331339 - 45331502
Alignment:
Q  231 atttactgaatttcatccaatttagcta---ctccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    ||||| |||| ||||||||| ||| |||   ||||| ||||||||||||||| | |   |||||||||||||| | ||||| | ||  ||||||||| ||    
T  45331339 atttattgaacttcatccaacttaactattcctccattaactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacataa 45331438  T
Q  328 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagt 390  Q
    ||||| ||||| |||| || ||||    |||||||||| |||||||||||||||||||| ||||    
T  45331439 ttaattattttcttaataaccgtgcgtcaaccttaaacgactattatttagagatggagagagt 45331502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 25089207 - 25089155
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 279  Q
    ||||||||| |||||||||||||| ||| ||||| ||||||||||||||||||    
T  25089207 ccttatttattgaatttcatccaacttaactacttcactaactacaattaata 25089155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 35367799 - 35367851
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 279  Q
    ||||||||| ||||||||||| || ||| ||||||||||||||||||||||||    
T  35367799 ccttatttattgaatttcatctaacttaactactccactaactacaattaata 35367851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 52009547 - 52009499
Alignment:
Q  1 cctatttccatttcccttcttctccaagagcagctttgttctgcaaatg 49  Q
    ||||||| |||||||||||||||| |||||||||||| |||||||||||    
T  52009547 cctattttcatttcccttcttctcgaagagcagcttttttctgcaaatg 52009499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 332
Target Start/End: Complemental strand, 44707895 - 44707776
Alignment:
Q  214 ttccactgttatacctt-atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| ||||||||| ||||| |||||||||||||| ||| || || ||||||||||||||||||  ||   ||||||||||  |||| |||||   |    
T  44707895 ttccactattatacctttatttattgaatttcatccaacttaactgcttcactaactacaattaataaatgtgttttagtaaatactactaattttatca 44707796  T
Q  313 ttgaaatcaacacaattaat 332  Q
    |||||||||| | |||||||    
T  44707795 ttgaaatcaatataattaat 44707776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 324
Target Start/End: Original strand, 24880874 - 24880970
Alignment:
Q  231 atttactgaatttcatccaatttag---ctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaaca 324  Q
    ||||| |||||||||||||| |||    ||||||||||||||||||||||||   | | |||||||||||||| | ||||| | |||||||||||||    
T  24880874 atttattgaatttcatccaacttactaactactccactaactacaattaataaaagtattttagtaaatgatattaattttaccattgaaatcaaca 24880970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 27687298 - 27687404
Alignment:
Q  287 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaac-tattatttagagatgga 384  Q
    |||||||||| ||| | ||||| | |||||||||||||||| |||| ||||| |||| ||| ||| ||||||||||||  || ||| ||||||||| |||    
T  27687298 tttagtaaataatattaattttaccattgaaatcaacacaactaatcatttttttaataattgtgcacaaaccttaaaagacttataatttagagacgga 27687397  T
Q  385 gggagta 391  Q
    |||||||    
T  27687398 gggagta 27687404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 466 - 504
Target Start/End: Complemental strand, 52009298 - 52009260
Alignment:
Q  466 aatttgacagcggcttttgggaaagaaagttatattcat 504  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  52009298 aatttgacagcggctattgggaaagaaagttatattcat 52009260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 22856356 - 22856307
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaat 278  Q
    ||||||| |||||||||||||  ||| |||||||||||||||||||||||    
T  22856356 ttatttattgaatttcatccagcttaactactccactaactacaattaat 22856307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 332
Target Start/End: Original strand, 31154126 - 31154230
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    |||||||||||||||||||| || |||   |||| || ||||||||||||||  || | ||||||| || ||||| |||||   ||| ||||||||||||    
T  31154126 cttatttactgaatttcatcaaacttaagcactctaccaactacaattaataaatgcaatttagtagataatactaattttatcattaaaatcaacacaa 31154225  T
Q  328 ttaat 332  Q
    |||||    
T  31154226 ttaat 31154230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 380
Target Start/End: Complemental strand, 6267917 - 6267823
Alignment:
Q  287 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 380  Q
    ||||||| ||||||||  ||||   ||| ||||||||||||||||| ||||  |||| ||| ||| ||||||||||||| |||||||||| ||||    
T  6267917 tttagtacatgatactagttttatcattaaaatcaacacaattaatcatttctttaaaaatagtgcacaaaccttaaacgactattattttgaga 6267823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 277
Target Start/End: Original strand, 37539124 - 37539174
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaa 277  Q
    ||||||||| ||||||||||| || ||| |||||| |||||||||||||||    
T  37539124 ccttatttattgaatttcatcaaacttaactactctactaactacaattaa 37539174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 229 - 277
Target Start/End: Complemental strand, 4441722 - 4441674
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaa 277  Q
    ||||||| | ||||||||| ||||||  |||||||||||||||||||||    
T  4441722 ttatttattaaatttcatctaatttaattactccactaactacaattaa 4441674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 7e-44; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 227 - 392
Target Start/End: Complemental strand, 7828042 - 7827876
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| | |||||||||||| ||| |||||||||||||||||||||||| | | | |||| ||||||||||| ||||| | |||||||||||||||    
T  7828042 ccttatttattaaatttcatccaacttaactactccactaactacaattaataagggtattttaataaatgatactaattttaccattgaaatcaacaca 7827943  T
Q  327 attaa-tattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 392  Q
    ||||| |||||| |||| ||||||||||||||||||||| | ||||||||||||| |||||||||||    
T  7827942 attaattattttcttaataatcgtgtacaaaccttaaacgattattatttagagacggagggagtat 7827876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 227 - 391
Target Start/End: Complemental strand, 6315893 - 6315728
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||||||| ||| ||||| |||||||||||||||||| | | | |||||||||||||| | |||||   |||||||| ||||||    
T  6315893 ccttatttattgaatttcatccaacttaactacttcactaactacaattaataagggtattttagtaaatgatattaattttatcattgaaattaacaca 6315794  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    || ||| ||||  |||| ||||| |||||| |||||||| ||||| ||||||||| ||||||||||    
T  6315793 atcaatcatttccttaataatcgagtacaacccttaaacgactataatttagagacggagggagta 6315728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 8725123 - 8724986
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| |||||||||| ||| ||| |||||||||||||||||||||||| |||   |||||||||||||| | ||||| | |||||||||||||||||    
T  8725123 ttatttattgaatttcattcaagttaactactccactaactacaattaataagtgtgttttagtaaatgatattaattttaccattgaaatcaacacaat 8725024  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaaca 365  Q
    |||| ||||  |||| ||||||| ||||||||||||||    
T  8725023 taatcatttctttaataatcgtgcacaaaccttaaaca 8724986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 40899915 - 40900080
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| ||||||||||| || ||| |||||||||||||||||||||||| | |   |||||||||||||||| ||||||| ||  |||||||||||    
T  40899915 ccttatttattgaatttcatctaacttaactactccactaactacaattaataagggtgttttagtaaatgatactaattttgccatcaaaatcaacaca 40900014  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||||| ||||  |||| || |||| | ||||||||||  |||||||||||||||| ||| |||||    
T  40900015 attaatcatttccttaataaccgtgcataaaccttaaatgactattatttagagatagagagagta 40900080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 214 - 391
Target Start/End: Original strand, 8698292 - 8698471
Alignment:
Q  214 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| ||||||| ||||||| |||||||||||||| ||| | |||||||||||||||||||||| | |   ||| |||||||  ||| ||||| | |    
T  8698292 ttccactattatacccttatttattgaatttcatccaacttaaccactccactaactacaattaataagggtgttttggtaaatgcaactaattttacca 8698391  T
Q  313 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||||||||||||||||||| ||||  |||| ||||||| |||||||||||||||| | ||||  |||| ||||||||||    
T  8698392 ttgaaatcaacacaattaatcatttctttaataatcgtgcacaaaccttaaacaacaaatattgtgagacggagggagta 8698471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 228 - 380
Target Start/End: Original strand, 27542793 - 27542946
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    |||||||| ||||||| |||||| ||| |||||||||||||||||||||||| | | | ||||||||||| || | ||||| | ||||||||||||||||    
T  27542793 cttatttattgaattttatccaacttaactactccactaactacaattaataagagtattttagtaaatggtattaattttaccattgaaatcaacacaa 27542892  T
Q  328 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 380  Q
    | ||| ||||  |||| ||||||| ||||||||||||| || || |||||||||    
T  27542893 tcaatcatttccttaataatcgtgcacaaaccttaaacgacaataatttagaga 27542946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 227 - 391
Target Start/End: Complemental strand, 40530340 - 40530175
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| | |||||||||||| ||| | |||||||||||||||||||||| | |   ||||||||||| |||| ||||| | |||||||||||||||    
T  40530340 ccttatttatttaatttcatccaacttaaccactccactaactacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacaca 40530241  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||||| ||||| |||| ||||||| ||| ||||||||| || | ||||  |||| ||||||||||    
T  40530240 attaatcattttcttaataatcgtgcacagaccttaaacgacaaatattgtgagacggagggagta 40530175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 214 - 362
Target Start/End: Original strand, 41496063 - 41496213
Alignment:
Q  214 ttccactgttatacctt-atttactgaatttcatccaatttagctactccactaactacaattaat-atgtggactttagtaaatgatactcattttgct 311  Q
    ||||||| ||||||||| ||||| || ||||||||||||||| ||||||||||||||||||||||| |||  |  |||| ||||||  ||| ||||| |     
T  41496063 ttccactattatacctttatttattgcatttcatccaatttaactactccactaactacaattaataatgatg-ttttactaaatgcaactaattttacc 41496161  T
Q  312 attgaaatcaacacaattaa-tattttgttaagaatcgtgtacaaaccttaa 362  Q
    |||||||||||||||||||| |||||| |||| |||||||||||||||||||    
T  41496162 attgaaatcaacacaattaattatttttttaataatcgtgtacaaaccttaa 41496213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 227 - 372
Target Start/End: Complemental strand, 6753774 - 6753629
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| | |||||||||||| ||| |||||||||||||||||||||||| | | | |||||||||||||||| ||||| | |||||||| || | |    
T  6753774 ccttatttattaaatttcatccaacttaactactccactaactacaattaataagggtattttagtaaatgatactaattttaccattgaaattaata-a 6753676  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactatta 372  Q
    |||||| ||||| |||| ||||||| | ||||||||||| |||||||    
T  6753675 attaatcattttcttaataatcgtgcataaaccttaaacgactatta 6753629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 4818548 - 4818713
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| ||||||||||| || |||   |||||||||||||||||||||| | |   ||||||||||| |||| ||||| | |||||||||||||||    
T  4818548 ccttatttattgaatttcatctaacttaatcactccactaactacaattaataagggtgttttagtaaatgctactaattttacaattgaaatcaacaca 4818647  T
Q  327 attaa-tattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    ||||| |||||  |||| ||||||| ||||||||||||| || | ||||  |||| ||||||||||    
T  4818648 attaattatttccttaataatcgtgcacaaaccttaaacgacaaatattgtgagacggagggagta 4818713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 229 - 332
Target Start/End: Original strand, 27580599 - 27580702
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| | |||||||| ||| ||| |||||||||||||||||||||||| | | | |||||||||||||| | ||||| | |||||||||||||||||    
T  27580599 ttatttaattaatttcattcaacttaactactccactaactacaattaataagggtattttagtaaatgatattaattttaccattgaaatcaacacaat 27580698  T
Q  329 taat 332  Q
    ||||    
T  27580699 taat 27580702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 229 - 378
Target Start/End: Original strand, 21060629 - 21060779
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| ||||||| |||||| ||| |||||||||||||||||||||||| | | | |||||||||| ||||| ||||| | ||  |||| ||||||||    
T  21060629 ttatttattgaattttatccaacttaactactccactaactacaattaataagagtattttagtaaataatactaattttaccatcaaaataaacacaat 21060728  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttaga 378  Q
    |||| ||||   ||| || |||| | ||||||||||| |||||||||||||    
T  21060729 taatcatttccctaataaccgtgcataaaccttaaacgactattatttaga 21060779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 227 - 324
Target Start/End: Original strand, 6754026 - 6754123
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaaca 324  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| | |   |||||||||||| | | ||||| |||||||||||||||    
T  6754026 ccttatttattgaatttcatccaacttaactactccactaactacaattaataagagtgttttagtaaatgacattaattttactattgaaatcaaca 6754123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 227 - 398
Target Start/End: Complemental strand, 1248720 - 1248548
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||| | ||||||| || ||| ||| ||||| |||||||||||||||||| | | | |||||||||||||| | ||||| | ||||||||||||| |    
T  1248720 ccttattaattgaattttattcaacttaactacttcactaactacaattaataagggtattttagtaaatgatattaattttaccattgaaatcaacata 1248621  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtattatcta 398  Q
    |||||| ||||  |||| || |||| ||||| ||||||| |||||| |||| ||| ||| | ||||| |||||    
T  1248620 attaataatttccttaataaccgtgcacaaatcttaaacgactattttttaaagacggatgaagtatcatcta 1248548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 369
Target Start/End: Complemental strand, 2232185 - 2232046
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||||||| ||| ||||||||||||    |||||||| | |   |||| |||||| |||| ||||| | |||||||||||||||    
T  2232185 ccttatttattgaatttcatccaacttaactactccactaa----aattaataagagttttttaataaatgctactaattttaccattgaaatcaacaca 2232090  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaacta 369  Q
    |||| | ||||| |||| ||||||| ||||||||||||| ||||    
T  2232089 attattcattttcttaataatcgtgcacaaaccttaaacgacta 2232046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 214 - 374
Target Start/End: Original strand, 31655036 - 31655198
Alignment:
Q  214 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| ||||||| ||||||| |||||||||| |||  ||  ||||||||||||||||||||||| |   | | |||||||||||| | ||||| | |    
T  31655036 ttccactattatacccttatttattgaatttcattcaacataattactccactaactacaattaataaggatattatagtaaatgatattaattttacca 31655135  T
Q  313 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 374  Q
    |||||||||||||||||||| ||||  |||| ||||||  |||||| |||||| |||| ||||    
T  31655136 ttgaaatcaacacaattaatcatttctttaataatcgtacacaaactttaaacgactaatatt 31655198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 227 - 332
Target Start/End: Complemental strand, 22848500 - 22848395
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| ||||||||||||||| || |||||||| ||||||||||||||| | |   |||| |||||  || | ||||| |||||||||||||||||    
T  22848500 ccttatttattgaatttcatccaatctaactactccattaactacaattaataagggtgttttaataaatactattaattttactattgaaatcaacaca 22848401  T
Q  327 attaat 332  Q
    ||||||    
T  22848400 attaat 22848395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 374
Target Start/End: Original strand, 9515803 - 9515891
Alignment:
Q  287 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 374  Q
    |||||||||||||||| ||||| | ||||||||||||||||||||| ||| | |||| ||||||| ||||||||||||| |||| ||||    
T  9515803 tttagtaaatgatactaattttaccattgaaatcaacacaattaatcattatcttaataatcgtgcacaaaccttaaacgactaatatt 9515891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 229 - 332
Target Start/End: Original strand, 4441020 - 4441123
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||     | |||||||||| ||| | |||||   ||| |||||||||||||    
T  4441020 ttatttattgaatttcatccaatttaactactccactaactacaattaataaaaatattttagtaaataatattaattttatcattaaaatcaacacaat 4441119  T
Q  329 taat 332  Q
    ||||    
T  4441120 taat 4441123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 393
Target Start/End: Original strand, 843519 - 843601
Alignment:
Q  312 attgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 393  Q
    ||||||||||||| ||||||| ||||| |||| ||||||| ||||||||||||||| |||||||  |||| ||||||||||||    
T  843519 attgaaatcaacaaaattaatcattttcttaataatcgtgcacaaaccttaaacaattattattgtgagacggagggagtatt 843601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 41478824 - 41478989
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtgg-actttagtaaatgatactcattttgctattgaaatcaacac 325  Q
    ||||||||| ||||||||||| || ||| ||| |||| ||||| ||||||| | | |  | |||||||||||| ||| ||||| | |||||||| | |||    
T  41478824 ccttatttattgaatttcatctaacttaacta-tccattaactgcaattaacaagggatattttagtaaatgacactaattttaccattgaaataagcac 41478922  T
Q  326 aattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    ||||||| ||||| |||| ||||| | |||||||||| || |||||||||||||||| ||| |||||    
T  41478923 aattaatcattttcttaaaaatcgcgcacaaaccttagacgactattatttagagatagagagagta 41478989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 391
Target Start/End: Original strand, 32440174 - 32440303
Alignment:
Q  263 actaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaacctta 361  Q
    ||||| ||||||||||| | | | |||||||||||||| | |||||   |||||||| |||||||||||| ||||  |||| |||| || |||||||||     
T  32440174 actaagtacaattaataagggtattttagtaaatgatattaattttatcattgaaattaacacaattaatcatttctttaaaaatcatgcacaaaccttt 32440273  T
Q  362 aacaactattatttagagatggagggagta 391  Q
    ||| |||||||||| |||| ||||||||||    
T  32440274 aacgactattattttgagacggagggagta 32440303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 38508266 - 38508138
Alignment:
Q  264 ctaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaa 362  Q
    |||||||||||||||| | | | |||| | | ||||||| ||||| | |||||||| |||||||||||| ||||| |||| ||||| | ||||| |||||    
T  38508266 ctaactacaattaataagagtattttaatgagtgatactaattttaccattgaaattaacacaattaatcattttcttaaaaatcgagcacaaatcttaa 38508167  T
Q  363 acaactattatttagagatggagggagta 391  Q
    || |||||||||| |||| ||| ||||||    
T  38508166 acgactattattttgagacggatggagta 38508138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 388
Target Start/End: Original strand, 11904202 - 11904365
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaatt-aatatgtggactttagtaaatgatactcattttgctattgaaatcaacac 325  Q
    ||||| ||| ||| ||| ||| |||||| ||||||||| |||||||||| |||| | | | |||||||||||||| | |||||  ||||||| |||| ||    
T  11904202 ccttaattattgatttttatcgaatttaactactccaccaactacaattaaataagagtattttagtaaatgatattaattttattattgaactcaatac 11904301  T
Q  326 aattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggaggga 388  Q
    ||||||| | ||| ||||  |||||| |||||| |||||| ||||||| ||| ||| |||||||    
T  11904302 aattaatcactttcttaaagatcgtgcacaaacattaaacgactattaattaaagagggaggga 11904365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 227 - 391
Target Start/End: Complemental strand, 30512802 - 30512636
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaa-ttaatatgtggactttagtaaatgatactcattttgctattgaaatcaacac 325  Q
    ||||||||| | |||||||||||| ||| ||| | |||||||||||  |||||| | | |  ||||||||||||  | ||||| | ||||||||||| ||    
T  30512802 ccttatttattaaatttcatccaacttaactatttcactaactacatgttaataagagtatcttagtaaatgatgttaattttaccattgaaatcaatac 30512703  T
Q  326 aattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    ||||||| ||||  |||| ||||||| | |||| ||| || ||||| ||||||||| ||||||||||    
T  30512702 aattaatcatttccttaataatcgtgcataaactttatacgactataatttagagacggagggagta 30512636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 227 - 391
Target Start/End: Complemental strand, 30553142 - 30552976
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaa-ttaatatgtggactttagtaaatgatactcattttgctattgaaatcaacac 325  Q
    ||||||||| | |||||||||||| ||| ||| | |||||||||||  |||||| | | |  ||||||||||||  | ||||| | ||||||||||| ||    
T  30553142 ccttatttattaaatttcatccaacttaactatttcactaactacatgttaataagagtatcttagtaaatgatgttaattttaccattgaaatcaatac 30553043  T
Q  326 aattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    ||||||| ||||  |||| ||||||| | |||| ||| || ||||| ||||||||| ||||||||||    
T  30553042 aattaatcatttccttaataatcgtgcataaactttatacgactataatttagagacggagggagta 30552976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 41492299 - 41492464
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtgg-actttagtaaatgatactcattttgctattgaaatcaacac 325  Q
    ||||||||| ||||||||||| || ||| ||| |||| |||||||| |||| | | |  | |||||||||||  ||| ||||| | |||||||| | |||    
T  41492299 ccttatttattgaatttcatctaacttaacta-tccattaactacatttaacaagggatattttagtaaatgtcactaattttaccattgaaataagcac 41492397  T
Q  326 aattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    ||||||| ||||| |||| ||||| | |||||||||| || ||||||||||| |||||||| |||||    
T  41492398 aattaatcattttcttaaaaatcgcgcacaaaccttagacgactattatttaaagatggagagagta 41492464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 332
Target Start/End: Original strand, 29374339 - 29374444
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| ||||||| || ||||||| ||||||||||||||||||||||||   |   ||||||||||| || | |||||   ||||||||||||| |    
T  29374339 ccttatttattgaattttattcaatttaactactccactaactacaattaataaaggtcttttagtaaatgctattaattttatcattgaaatcaacata 29374438  T
Q  327 attaat 332  Q
    ||||||    
T  29374439 attaat 29374444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 228 - 364
Target Start/End: Complemental strand, 42803735 - 42803598
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    |||||||| |||||||||||||| ||| | |||||| |||||||||||||||   |   ||||||||||  |||| ||||| | |||||||| |||||||    
T  42803735 cttatttattgaatttcatccaacttaaccactccattaactacaattaataatggtgttttagtaaatactactaattttacaattgaaatgaacacaa 42803636  T
Q  328 ttaa-tattttgttaagaatcgtgtacaaaccttaaac 364  Q
    |||| |||||  || | ||||||| | |||||||||||    
T  42803635 ttaattatttctttgataatcgtgcataaaccttaaac 42803598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 229 - 369
Target Start/End: Complemental strand, 15818596 - 15818453
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaa--atgatactcattttgctattgaaatcaacaca 326  Q
    ||||||| | |||||||||||||||| |||||||||| | |||||||||||   |   ||||||||  ||| |||| ||||| | |||||||||||||||    
T  15818596 ttatttattaaatttcatccaatttaactactccactgattacaattaataaaggtgttttagtaaatatgctactaattttaccattgaaatcaacaca 15818497  T
Q  327 att-aatattttgttaagaatcgtgtacaaaccttaaacaacta 369  Q
    ||| || ||||  |||| ||||||| | ||||||||||| ||||    
T  15818496 attaaacatttccttaataatcgtgcataaaccttaaacgacta 15818453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 385
Target Start/End: Original strand, 29570390 - 29570548
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    |||||||| |||||||||||||| ||| ||| |||| |||||||||||||||   |   ||||| ||||  || | |||||   ||| ||||||||||||    
T  29570390 cttatttattgaatttcatccaacttaactattccattaactacaattaataaaggtgttttagcaaatactaataattttaacattaaaatcaacacaa 29570489  T
Q  328 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggag 385  Q
    ||||| ||||  |||| ||||||| ||||| ||||||| |||| ||||  |||||||||    
T  29570490 ttaatcatttctttaataatcgtgcacaaatcttaaacgactaatattgtgagatggag 29570548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 287 - 375
Target Start/End: Complemental strand, 37184135 - 37184046
Alignment:
Q  287 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattattt 375  Q
    |||||||||||||| | ||||| | |||||||||||| |||||||| ||||| |||| |||| || ||||| |||||| | |||||||||    
T  37184135 tttagtaaatgatattaattttaccattgaaatcaactcaattaatcatttttttaaaaatcttgcacaaaacttaaagatctattattt 37184046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 19929943 - 19929995
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 279  Q
    ||||||||| |||||||||||||| ||| ||| | ||||||||||||||||||    
T  19929943 ccttatttattgaatttcatccaacttaactatttcactaactacaattaata 19929995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 391
Target Start/End: Original strand, 5282467 - 5282504
Alignment:
Q  354 aaaccttaaacaactattatttagagatggagggagta 391  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  5282467 aaaccttaaacaactattattttgagctggagggagta 5282504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 5731833 - 5731878
Alignment:
Q  287 tttagtaaatgatactcattttgctattgaaatcaacacaattaat 332  Q
    ||||||||||||||| ||||||| |||| |||| ||||||||||||    
T  5731833 tttagtaaatgatacacattttgttattaaaatgaacacaattaat 5731878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 364
Target Start/End: Original strand, 29856056 - 29856180
Alignment:
Q  239 aatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaatattttg 338  Q
    |||| ||| ||| ||| |||||||||||||||||||||||| | | | ||||| || ||||| | |||||   |||||||||||| |||||  |||||      
T  29856056 aattgcattcaacttaactactccactaactacaattaataagagtattttagcaagtgatattaattttatcattgaaatcaacgcaatt-ttatttcc 29856154  T
Q  339 ttaagaatcgtgtacaaaccttaaac 364  Q
    |||| ||||||| ||||| |||||||    
T  29856155 ttaataatcgtgcacaaatcttaaac 29856180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 392
Target Start/End: Complemental strand, 42922894 - 42922818
Alignment:
Q  316 aaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 392  Q
    ||||||||||||||||| ||||| |||| |||| || ||||| ||||||| ||||| |||||||| ||| ||||||||    
T  42922894 aaatcaacacaattaatcattttcttaataatcatgcacaaatcttaaacgactataatttagagttgg-gggagtat 42922818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 355 - 391
Target Start/End: Complemental strand, 2588055 - 2588019
Alignment:
Q  355 aaccttaaacaactattatttagagatggagggagta 391  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  2588055 aaccttaaacgactattatttagagacggagggagta 2588019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 38161515 - 38161455
Alignment:
Q  240 atttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgata 300  Q
    ||||||||||| ||| |||||||||||||||| ||||||| |   | ||||||||||||||    
T  38161515 atttcatccaacttaactactccactaactacgattaataaggatattttagtaaatgata 38161455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 3e-34; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 227 - 391
Target Start/End: Complemental strand, 37695784 - 37695618
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| ||||||||||| || ||| |||||||||||||||||||||||| | |   |||||||||||||| | ||||| | |||||||||||||||    
T  37695784 ccttatttattgaatttcatctaacttaactactccactaactacaattaataagggtgttttagtaaatgatattaattttaccattgaaatcaacaca 37695685  T
Q  327 attaat-attttgttaagaatcgtgtac-aaaccttaaacaactattatttagagatggagggagta 391  Q
    |||||| ||||  |||| ||||||| || ||||||||||| ||||||||||||||| ||||||||||    
T  37695684 attaatcatttccttaataatcgtgcacaaaaccttaaacgactattatttagagacggagggagta 37695618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 227 - 392
Target Start/End: Original strand, 19823008 - 19823174
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||||||| ||| ||| |||||||||||||||||||| | |   |||||||||||||||| ||| | | ||  |||||||||||    
T  19823008 ccttatttattgaatttcatccaacttaactattccactaactacaattaataagggtgttttagtaaatgatactaattctaccatcaaaatcaacaca 19823107  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 392  Q
    |||||| ||||  |||| ||||||| ||||||||||||||||||| |||||||||  ||||||||||    
T  19823108 attaatcatttccttaataatcgtgcacaaaccttaaacaactataatttagagacagagggagtat 19823174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 227 - 380
Target Start/End: Complemental strand, 30190778 - 30190624
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||| | |||||||||||||| ||| |||||||||||||||||||||||| | | | |||||||||||||||| ||||| | |||||||||||||||    
T  30190778 ccttattaattgaatttcatccaacttaactactccactaactacaattaataagggtattttagtaaatgatactaattttaccattgaaatcaacaca 30190679  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 380  Q
    |||||| ||||  || | || |||| ||||||||||||| |||||| ||||||||    
T  30190678 attaatcatttccttcataaccgtgcacaaaccttaaacgactattttttagaga 30190624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 36476581 - 36476746
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| ||||||||||| || ||| |||||| ||||||||||||||||| | | | |||||||||||||| | ||||| | |||| ||||||||||    
T  36476581 ccttatttattgaatttcatcaaacttaactactctactaactacaattaataagggtattttagtaaatgatattaattttaccattgcaatcaacaca 36476680  T
Q  327 attaa-tattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    || || |||||| |||| || |||| |||||||||||||||| || ||||||||| ||||||||||    
T  36476681 atcaattattttcttaataaccgtgaacaaaccttaaacaacaataatttagagacggagggagta 36476746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 214 - 364
Target Start/End: Complemental strand, 43253995 - 43253843
Alignment:
Q  214 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| ||||||| ||||||| |||||||||||| | ||| |||||||||||||||||||||||| | |   ||||||||||| |||| ||||| | |    
T  43253995 ttccactattatacccttatttaatgaatttcatcccacttaactactccactaactacaattaataagggtgttttagtaaatgctactaattttacca 43253896  T
Q  313 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaac 364  Q
    |||||||||||||||||||| ||||  |||| ||||||| |||||||||||||    
T  43253895 ttgaaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaac 43253843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 229 - 391
Target Start/End: Complemental strand, 29024081 - 29023919
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| |||||||||||||| |||  ||||||||||||||||||||||| |  |  |||||||||||||||| ||||| | ||  |||||||||||||    
T  29024081 ttatttattgaatttcatccaacttaattactccactaactacaattaataagatgt-tttagtaaatgatactaattttaccatcaaaatcaacacaat 29023983  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||| ||||| |||| ||||||| | ||||||||||| ||||||| |||| || ||||||||||    
T  29023982 taatcatttttttaataatcgtgcataaaccttaaacgactattaattagtgacggagggagta 29023919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 214 - 391
Target Start/End: Complemental strand, 36460548 - 36460369
Alignment:
Q  214 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| ||||||| ||||||| |||||||||||||| |||  ||||||| ||||||||||||||| |   | |||| |||||| |||| ||||| |||    
T  36460548 ttccactattatacccttatttattgaatttcatccaacttaattactccattaactacaattaataagaatattttaataaatgttactaattttacta 36460449  T
Q  313 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    ||||||| |||||||||||| ||||| |||| ||||||| |||||| |||||| |||| ||||   ||||||||||||||    
T  36460448 ttgaaattaacacaattaataattttcttaataatcgtgcacaaactttaaacgactaatattgtaagatggagggagta 36460369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 214 - 391
Target Start/End: Original strand, 44301545 - 44301724
Alignment:
Q  214 ttccactgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| |||||| |||||||| |||||||||||||| ||| |||||||||||| ||||||| ||| | | | |||||||||||||||| |||||   |    
T  44301545 ttccactattatactcttatttattgaatttcatccaacttaactactccactaattacaattgataagggtattttagtaaatgatactaattttatca 44301644  T
Q  313 ttgaaatcaacacaatt-aatattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||||||||||| |||| |||||||  |||| | ||| | ||||||||||||| || ||||||| |||| ||||||||||    
T  44301645 ttgaaatcaacataattaaatatttccttaaaagtcgggcacaaaccttaaacgaccattattttgagacggagggagta 44301724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 228 - 392
Target Start/End: Original strand, 37311948 - 37312113
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    |||||||| ||||||||||  |||||| |||||||||||||||||||||||| | |   ||||||||||| |||| ||||| | ||||||||||||||||    
T  37311948 cttatttattgaatttcattaaatttaactactccactaactacaattaataagggttttttagtaaatgctactaattttaccattgaaatcaacacaa 37312047  T
Q  328 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 392  Q
    ||||| ||||  |||| ||||||| | ||||||||||| |||| ||||  |||| | |||||||||    
T  37312048 ttaatcatttccttaataatcgtgcataaaccttaaacgactaatattgtgagacgtagggagtat 37312113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 231 - 380
Target Start/End: Complemental strand, 24569214 - 24569064
Alignment:
Q  231 atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaatta 330  Q
    ||||| |||||||||| ||| ||| |||||||||||||||||||||||| | | | |||||||||| ||| | ||||| | |||||||||||||||||||    
T  24569214 atttaatgaatttcattcaacttaactactccactaactacaattaataagggtattttagtaaataatattaattttaccattgaaatcaacacaatta 24569115  T
Q  331 at-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 380  Q
    || ||||| |||| ||||||| | ||| ||||| | ||||| |||||||||    
T  24569114 atcattttcttaataatcgtgcataaatcttaagcgactataatttagaga 24569064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 239 - 391
Target Start/End: Original strand, 38795353 - 38795506
Alignment:
Q  239 aatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-atttt 337  Q
    |||||||||||| ||| | ||||||| |||||||||||||| | | | ||  |||||||||||| ||||| | |||||||| |||||||||||| ||||     
T  38795353 aatttcatccaacttaacaactccaccaactacaattaataagggcatttgggtaaatgatactaattttaccattgaaataaacacaattaatcatttc 38795452  T
Q  338 gttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
     ||||  |||||| |||||| |||||| |||||||||| |||||||||||||||    
T  38795453 cttaaatatcgtgcacaaacattaaacgactattattttgagatggagggagta 38795506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 214 - 391
Target Start/End: Complemental strand, 8679186 - 8679007
Alignment:
Q  214 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| ||||||| ||||||| |||||||||||||| |||  || | ||||||||| |||||||| |     ||||||||||| |||| ||||| | |    
T  8679186 ttccactattatacccttatttattgaatttcatccaacttaattaattcactaactataattaataaggatcttttagtaaatgctactaattttacca 8679087  T
Q  313 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||||||||||||||||||| ||||  |||| ||||||| | ||| ||||||| ||||| ||||||||| ||||||||||    
T  8679086 ttgaaatcaacacaattaatcatttccttaataatcgtgcataaatcttaaacgactataatttagagacggagggagta 8679007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 227 - 380
Target Start/End: Complemental strand, 10366767 - 10366606
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgt-------ggactttagtaaatgatactcattttgctattgaaat 319  Q
    ||||||||| |||||||||||||| ||| ||||| ||||||||||||||||||  |       |   |||| ||||||||||| ||||| | ||||||||    
T  10366767 ccttatttattgaatttcatccaacttaactacttcactaactacaattaataattaataagagtgttttaataaatgatactaattttaccattgaaat 10366668  T
Q  320 caacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 380  Q
    ||||||||||||| ||||| |||| ||||||| ||||||||||||| ||| |||||||||||    
T  10366667 caacacaattaatcattttcttaataatcgtgcacaaaccttaaacgactgttatttagaga 10366606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 227 - 375
Target Start/End: Complemental strand, 12736690 - 12736541
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| ||||||| |||||| ||| ||||| |||||| ||||||||||| | | | | |||||||||||||| |||||   |||  ||||||||||    
T  12736690 ccttatttattgaattttatccaaattaactactacactaagtacaattaataagggtattgtagtaaatgatactaattttatcattagaatcaacaca 12736591  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattattt 375  Q
    |||||| ||||  |||| ||||||| |||||| |||||||||||||||||    
T  12736590 attaatcatttccttaaaaatcgtgcacaaactttaaacaactattattt 12736541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 227 - 391
Target Start/End: Complemental strand, 5323055 - 5322892
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| ||||||||||| || ||| |||||  ||||| || |||||||| ||| | |||||||||||||| | |||||   | ||||||||||| |    
T  5323055 ccttatttattgaatttcatcaaacttaactactttactaattataattaataagtgtattttagtaaatgatattaattttatcactgaaatcaacata 5322956  T
Q  327 attaatattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    ||||||  ||| |||| ||||||| ||||||||||||||||||| ||||| ||| |||| |||||    
T  5322955 attaatcattt-ttaataatcgtgcacaaaccttaaacaactataatttaaagacggagtgagta 5322892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 229 - 380
Target Start/End: Original strand, 11905821 - 11905973
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| |||||||||||||| ||| | |||||| ||||||||||||||| | |  ||||||||||||||||| |||||   ||  |||| ||||||||    
T  11905821 ttatttattgaatttcatccaacttaacaactccattaactacaattaataagggtgctttagtaaatgatactaattttatcatcaaaattaacacaat 11905920  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 380  Q
    |||| ||||| |||| ||||||| | |||| |||||| | |||||||||||||    
T  11905921 taatcattttcttaataatcgtgcataaactttaaacgagtattatttagaga 11905973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 227 - 380
Target Start/End: Original strand, 45710847 - 45711001
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||| ||||||||| ||| ||||||||||||||||||||||||   |   |||||||||||||| | ||||| | ||  ||||||||| |    
T  45710847 ccttatttattgaacttcatccaacttaactactccactaactacaattaataaaagtgttttagtaaatgatattaattttaccatcaaaatcaacata 45710946  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 380  Q
    |||||| ||||| |||| || |||| |  |||||||||| |||||||||||||||    
T  45710947 attaatcattttcttaacaaccgtgcatcaaccttaaacgactattatttagaga 45711001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 393
Target Start/End: Original strand, 37497491 - 37497656
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| |||||||||||||| ||| ||||||||||||||||| |||| |   |   |||||||||||||||| ||||| | ||  |||||||||||||    
T  37497491 ttatttattgaatttcatccaacttaactactccactaactacagttaacaacggtgttttagtaaatgatactaattttaccatcaaaatcaacacaat 37497590  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 393  Q
     ||| ||||  |||| ||||||| | ||| ||||||| | ||||||||||||| ||| ||||||||    
T  37497591 aaatcatttccttaataatcgtgcataaatcttaaacgattattatttagagacggatggagtatt 37497656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 263 - 385
Target Start/End: Original strand, 49830162 - 49830286
Alignment:
Q  263 actaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat--attttgttaagaatcgtgtacaaacctt 360  Q
    |||||||||||||||||   | | |||||||||||||| | ||||| |||||||||||||||||||||||   |||| |||| ||||||| |||||| ||    
T  49830162 actaactacaattaataatggtattttagtaaatgatattaattttactattgaaatcaacacaattaatcattttttttaataatcgtgcacaaacgtt 49830261  T
Q  361 aaacaactattatttagagatggag 385  Q
    |||| ||||| ||||||||| ||||    
T  49830262 aaacgactataatttagagacggag 49830286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 214 - 393
Target Start/End: Complemental strand, 51838091 - 51837911
Alignment:
Q  214 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| ||||||| ||||||| |||||||||| |||  || ||||||||||| |||||| ||||| | | | |||||||||||||| | |||||   |    
T  51838091 ttccactattatacccttatttaatgaatttcattcaacgtaactactccactagctacaactaataagggtattttagtaaatgatattaattttatca 51837992  T
Q  313 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 393  Q
    |||||||||||||||||||| ||||  |||| | || || ||||||||||||  ||||| ||||||||| || |||||||||    
T  51837991 ttgaaatcaacacaattaatcatttacttaatactcatgcacaaaccttaaatgactataatttagagacgg-gggagtatt 51837911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 392
Target Start/End: Original strand, 1778640 - 1778805
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||| ||||| |     |||||||||||  | | |||||   |||||||||||||||    
T  1778640 ccttatttattgaatttcatccaacttatctactccactaactacaa-taataaggatgttttagtaaatgtcattaattttatcattgaaatcaacaca 1778738  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 392  Q
    |||||| ||||  |||| |||| || ||||||||||||| |||| ||||  |||| |||||||||||    
T  1778739 attaatcatttccttaataatcatgcacaaaccttaaacgactaatattgtgagacggagggagtat 1778805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 28690898 - 28690760
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| |||||||||||||| ||| |||   ||||||||||||||||||     | |||||||||||||| | ||||| |  ||||||||||||||||    
T  28690898 ttatttattgaatttcatccaacttaactatctcactaactacaattaataaagatattttagtaaatgatattaattttaccgttgaaatcaacacaat 28690799  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaa 366  Q
    |||| ||||  |||| ||||||| |||||||||||||||    
T  28690798 taatcatttctttaataatcgtgcacaaaccttaaacaa 28690760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 378
Target Start/End: Original strand, 43719274 - 43719415
Alignment:
Q  237 tgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-att 335  Q
    |||||| ||||||||||| |||||||||||||||||||||||| |     || ||| ||||||| | ||||| | ||| ||||||||||||||||| |||    
T  43719274 tgaattccatccaatttaactactccactaactacaattaataaggatgtttcagtgaatgata-taattttaccattaaaatcaacacaattaatcatt 43719372  T
Q  336 ttgttaagaatcgtgtacaaaccttaaacaactattatttaga 378  Q
    || ||||  ||||||||||||| |||| | |||||||||||||    
T  43719373 ttattaatgatcgtgtacaaactttaaccgactattatttaga 43719415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 229 - 389
Target Start/End: Original strand, 19611908 - 19612068
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| ||||||||||| || ||| ||||||||||||| |||||||||| |   | |||||||||| ||| | |||||   |||||||||||||||||    
T  19611908 ttatttattgaatttcatcaaacttaactactccactaacaacaattaataaggatattttagtaaattata-taattttaacattgaaatcaacacaat 19612006  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggag 389  Q
    |||| | ||| |||| ||||||  |||||| |||||||| |||||| | |||| ||||||||    
T  19612007 taatcactttcttaaaaatcgtacacaaactttaaacaattattatctcgagacggagggag 19612068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 229 - 363
Target Start/End: Original strand, 11632080 - 11632214
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| |||||||||||||| ||| ||  ||||||||||||||||||||   |   ||||||||||  |||| ||||| |  ||||||||||||||||    
T  11632080 ttatttattgaatttcatccaacttaacttttccactaactacaattaataaaggtgttttagtaaatactactaattttaccgttgaaatcaacacaat 11632179  T
Q  329 taatattttgttaagaatcgtgtacaaaccttaaa 363  Q
    ||||  ||| |||| ||||||| ||||| ||||||    
T  11632180 taatcattttttaataatcgtgcacaaatcttaaa 11632214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 364
Target Start/End: Complemental strand, 37773082 - 37772944
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||| ||| ||| ||| |||||| |||| |||||||| | | | |||||||||||||| | ||||| | |||| |||||| |||    
T  37773082 ccttatttaatgaatttcattcaacttaactattccactgactataattaataagggtattttagtaaatgatattaattttaccattgtaatcaataca 37772983  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaac 364  Q
    |||||| ||||  |||| |||| || |||||||||||||    
T  37772982 attaatcatttccttaataatcatgcacaaaccttaaac 37772944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 332
Target Start/End: Complemental strand, 23004500 - 23004395
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||| ||| ||| |||||||||||||||||||||||| | |   ||||||| ||  |||| ||||| | ||||||||| |||||    
T  23004500 ccttatttattgaatttcatacaacttaactactccactaactacaattaataagggtgttttagtatatactactaattttaccattgaaatcgacaca 23004401  T
Q  327 attaat 332  Q
    ||||||    
T  23004400 attaat 23004395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 327
Target Start/End: Complemental strand, 39043875 - 39043772
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatac---tcattttgctattgaaatcaac 323  Q
    ||||||||| |||||||||| ||| ||| ||||||||||||||||||||||||   | | |||||||||||||||   | ||||| | ||||||||||||    
T  39043875 ccttatttattgaatttcattcaacttaactactccactaactacaattaataaaggtattttagtaaatgatactattaattttaccattgaaatcaac 39043776  T
Q  324 acaa 327  Q
    ||||    
T  39043775 acaa 39043772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 393
Target Start/End: Original strand, 3313252 - 3313414
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    |||||||| |||||||||||||| |||  ||||||| ||||||||||||||| | |   |||||| |||  |||| ||||| | ||||||||| ||| ||    
T  3313252 cttatttattgaatttcatccaacttaaatactccattaactacaattaataagggtgttttagttaattctactaattttaccattgaaatcgacataa 3313351  T
Q  328 ttaatattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 393  Q
    |    ||||| |||| ||||||| ||||||||||||| |||| ||||  ||| |||| ||||||||    
T  3313352 t---cattttcttaataatcgtgcacaaaccttaaacgactaatattgtgaggtggatggagtatt 3313414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 375
Target Start/End: Original strand, 14194563 - 14194701
Alignment:
Q  237 tgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-att 335  Q
    |||||||||||||| |||  |||||||||||| |||||| |||   | | ||||||||||| |||| |||||   |||||||||||||||||| || |||    
T  14194563 tgaatttcatccaacttaattactccactaac-acaattcataaaagtattttagtaaatggtactaattttatcattgaaatcaacacaattgatcatt 14194661  T
Q  336 ttgttaagaatcgtgtacaaaccttaaacaactattattt 375  Q
    |  |||| ||||||| ||||||||||||| ||| ||||||    
T  14194662 tctttaaaaatcgtgcacaaaccttaaacgactgttattt 14194701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 363
Target Start/End: Original strand, 34750507 - 34750630
Alignment:
Q  241 tttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgt 339  Q
    |||||||||| ||| ||||||||| |||||||||||||| |     |||||||||||||||| ||||| | ||| ||||||||||||| ||| ||||  |    
T  34750507 tttcatccaagttaactactccaccaactacaattaataaggatgttttagtaaatgatactaattttaccattaaaatcaacacaatcaatcatttcat 34750606  T
Q  340 taagaatcgtgtacaaaccttaaa 363  Q
     || ||||||| ||||||||||||    
T  34750607 caaaaatcgtgcacaaaccttaaa 34750630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 214 - 279
Target Start/End: Original strand, 12904847 - 12904913
Alignment:
Q  214 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaata 279  Q
    ||||||| ||||||| ||||||| |||||||||||||| |||  |||||||||||||||||||||||    
T  12904847 ttccactattatacccttatttattgaatttcatccaacttaattactccactaactacaattaata 12904913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 227 - 380
Target Start/End: Original strand, 53560214 - 53560368
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||| ||||| ||| ||| |||||| |||||||| | |||||| | |   |||||||||||||||  ||||| | ||  ||||||||| |    
T  53560214 ccttatttattgaacttcattcaacttaactactctactaactatatttaataagggtgttttagtaaatgatacaaattttaccatcaaaatcaacata 53560313  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 380  Q
    |||||| ||||  ||||  |||||| |  ||||||||||||||||||||||||||    
T  53560314 attaatcatttccttaatcatcgtgcatcaaccttaaacaactattatttagaga 53560368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 229 - 364
Target Start/End: Original strand, 27471334 - 27471470
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| |||||||||| ||| ||| |||||||||||  || |||||||| | |   |||||||||||  ||| ||||  | ||||||||||||| |||    
T  27471334 ttatttattgaatttcattcaacttaactactccactacttataattaataagagtgttttagtaaatgcaactaatttcaccattgaaatcaacataat 27471433  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaac 364  Q
    |||| ||||| |||| ||||||| ||||| |||||||    
T  27471434 taatcattttcttaataatcgtgcacaaatcttaaac 27471470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 287 - 374
Target Start/End: Complemental strand, 31158579 - 31158492
Alignment:
Q  287 tttagtaaatgatactcattttgctattgaaatcaacacaattaatattttgttaagaatcgtgtacaaaccttaaacaactattatt 374  Q
    ||||||||||| || | ||||| |||| ||||||| ||||||||||  ||| |||| ||||||| ||||||||||||| |||| ||||    
T  31158579 tttagtaaatgttattaattttactatcgaaatcagcacaattaatcattttttaataatcgtgcacaaaccttaaacgactaatatt 31158492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 304 - 374
Target Start/End: Complemental strand, 33491124 - 33491053
Alignment:
Q  304 attttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 374  Q
    ||||| ||||||||||||||||||||||| ||||  |||| ||||||| ||||||||||||| |||| ||||    
T  33491124 attttactattgaaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgactaatatt 33491053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 393
Target Start/End: Original strand, 17652834 - 17652912
Alignment:
Q  316 aaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 393  Q
    ||||||||||||||||| ||||  |||| ||||||| | |||||| |||| ||||||||||||||| ||| ||||||||    
T  17652834 aaatcaacacaattaatcatttccttaataatcgtgcataaacctcaaacgactattatttagagacggatggagtatt 17652912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 380
Target Start/End: Original strand, 19609298 - 19609450
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| ||||||| ||| || ||| ||||||||||||| |||| ||||| |   | ||| |||||||||| | ||||| | ||||||||||||||||     
T  19609298 ttatttattgaattttatcaaacttatctactccactaacaacaagtaataagaatatttttgtaaatgatattaattttacgattgaaatcaacacaaa 19609397  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 380  Q
    |||| ||||| |||| | || |  ||||| ||||||| | |||||||| ||||    
T  19609398 taatcattttcttaaaattcatacacaaatcttaaacgattattattttgaga 19609450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 308
Target Start/End: Complemental strand, 30682182 - 30682103
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcatttt 308  Q
    ||||||| |||||||| ||||| |||  || |||| ||||||||||||||| |   | ||||||||||||||||||||||    
T  30682182 ttatttattgaatttcgtccaacttaattattccattaactacaattaataagattattttagtaaatgatactcatttt 30682103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 374
Target Start/End: Complemental strand, 38137562 - 38137413
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatg---atactcattttgctattgaaatcaacac 325  Q
    ||||||| ||||||||||| |||||| |||| |||||||||||| |||||| |   | ||||||| |||    |||| ||||| ||||||||||| ||||    
T  38137562 ttatttattgaatttcatcgaatttaactaccccactaactacagttaataagaatattttagtagatgtcagtactaattttactattgaaatcgacac 38137463  T
Q  326 aattaa-tattttgttaagaatcgtgtacaaaccttaaacaactattatt 374  Q
    ||| || |||||  || | |||| || ||||||||||||| |||| ||||    
T  38137462 aatgaattatttcatttataatcatgcacaaaccttaaacgactaatatt 38137413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 391
Target Start/End: Complemental strand, 49447909 - 49447747
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| | ||||||||| |||||| ||| || ||||||||||||||||| | | | ||| |||||| ||| |  ||| |   ||||||||||||||    
T  49447909 ccttatttattaaatttcatcaaatttaactattctactaactacaattaataagggtattttggtaaataatattattttcg---ttgaaatcaacaca 49447813  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||||| |||| |||||  |||||  |||||| |||||| |||| || || ||||| || ||||||    
T  49447812 attaatcatttcgttaattatcgtacacaaacattaaacgactaatagtttgagatagatggagta 49447747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 332
Target Start/End: Complemental strand, 3901267 - 3901162
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||||||| |||  ||| ||||||||||||| ||||| |     |||||||||||||| | |||||   |||||||| || |||    
T  3901267 ccttatttattgaatttcatccaacttaagtaccccactaactacaactaataagaatgttttagtaaatgatattaattttatcattgaaattaataca 3901168  T
Q  327 attaat 332  Q
    ||||||    
T  3901167 attaat 3901162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 395
Target Start/End: Complemental strand, 50035271 - 50035166
Alignment:
Q  291 gtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggag 389  Q
    ||||||| |||| |||||  |||||||||||||| ||||| | ||||| |||| |||| || ||||||||||||   ||| ||||  |||| ||||||||    
T  50035271 gtaaatgctactaattttattattgaaatcaacataattattcattttcttaataatcatgcacaaaccttaaaagtctaatattgtgagacggagggag 50035172  T
Q  390 tattat 395  Q
    ||||||    
T  50035171 tattat 50035166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 17652749 - 17652801
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 279  Q
    ||||||||| | |||||||||||| ||| ||||  ||||||||||||||||||    
T  17652749 ccttatttattaaatttcatccaacttaactacctcactaactacaattaata 17652801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 336
Target Start/End: Original strand, 37804898 - 37804930
Alignment:
Q  304 attttgctattgaaatcaacacaattaatattt 336  Q
    ||||| |||||||||||||||||||||||||||    
T  37804898 attttactattgaaatcaacacaattaatattt 37804930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 1e-33; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 231 - 391
Target Start/End: Original strand, 34947508 - 34947669
Alignment:
Q  231 atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaatta 330  Q
    ||||| |||||||||||||| ||| |||||||||||||||||||||||| | |   |||||||||||||| | ||||| | |||||||||||||||||||    
T  34947508 atttattgaatttcatccaacttaactactccactaactacaattaataagggtgttttagtaaatgataataattttaccattgaaatcaacacaatta 34947607  T
Q  331 at-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    || ||||  |||| || | || ||||||||||||| ||||||||||||||| ||||||||||    
T  34947608 atcatttctttaataaacatgcacaaaccttaaacgactattatttagagacggagggagta 34947669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 229 - 369
Target Start/End: Complemental strand, 24516412 - 24516271
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| |||||||||||||| ||| |||||||||||||||||||||||| |     ||||||||||| |||| ||||| | |||||||||||||||||    
T  24516412 ttatttattgaatttcatccaacttaactactccactaactacaattaataaggtttttttagtaaatgttactaattttaccattgaaatcaacacaat 24516313  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaacta 369  Q
    |||| ||||| |||| ||||||||| ||||||||||| ||||    
T  24516312 taatcattttattaataatcgtgtataaaccttaaacgacta 24516271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 228 - 393
Target Start/End: Original strand, 83390 - 83556
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    |||||||| ||||||||||| || ||| ||||||| |||||||||||||||| |     |||||||||||||||| ||||| | ||  ||||||||||||    
T  83390 cttatttattgaatttcatcaaacttaactactccgctaactacaattaataagaatgttttagtaaatgatactaattttaccatcaaaatcaacacaa 83489  T
Q  328 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 393  Q
    ||||| ||||  |||| ||| ||| | ||||||||||| ||||||||||||||| ||||||||||||    
T  83490 ttaatcatttccttaataattgtgcataaaccttaaacgactattatttagagacggagggagtatt 83556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 213 - 391
Target Start/End: Original strand, 26974015 - 26974198
Alignment:
Q  213 cttccactgttatacctt-atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaa---atgatactcatttt 308  Q
    |||||||| |||||| || ||||| | |||||||| ||| ||| |||||||||||||||||||||||| | | | ||||||||   |||||| | |||||    
T  26974015 cttccactattatacatttatttaataaatttcattcaacttaactactccactaactacaattaataagagtattttagtaaatgatgatattaatttt 26974114  T
Q  309 gctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
     | ||||||||||||||||||||| ||||  |||| ||||||| ||||||||||||| ||||| ||||||||| ||| ||||||    
T  26974115 accattgaaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgactataatttagagacggaaggagta 26974198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 214 - 393
Target Start/End: Original strand, 28103723 - 28103904
Alignment:
Q  214 ttccactgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| |||||| |||||||| |||||||||||||| ||| | ||| |||||||||||||||||| | |   ||| ||||||| | || ||||| | |    
T  28103723 ttccactattatacgcttatttattgaatttcatccaacttaaccacttcactaactacaattaataagggtgttttggtaaatgctgctaattttacca 28103822  T
Q  313 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 393  Q
    |||||||||||||||||||| ||||| |||| ||||||| ||||||||||||| || | ||||  |||| ||||||||||||    
T  28103823 ttgaaatcaacacaattaatcattttcttaataatcgtgcacaaaccttaaacgacaaatattgtgagacggagggagtatt 28103904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 228 - 392
Target Start/End: Complemental strand, 28202433 - 28202268
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    |||||||| |||||||||||||| ||  |||||||||||||||||||||||| |     |||||||||||| | | ||||| | ||  ||||||||||||    
T  28202433 cttatttattgaatttcatccaactttactactccactaactacaattaataaggatgttttagtaaatgacattaattttaccatcaaaatcaacacaa 28202334  T
Q  328 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 392  Q
    ||||| ||||| |||| || |||| | ||||||||||||||||||||||||||| ||| |||||||    
T  28202333 ttaattattttcttaataaccgtgcataaaccttaaacaactattatttagagacggatggagtat 28202268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 227 - 393
Target Start/End: Original strand, 9785992 - 9786159
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| ||||||| |||||| ||| ||||| |||||||||||||||||| | |   |||||||||||| | | ||||| | ||  |||||||||||    
T  9785992 ccttatttattgaattttatccaacttaactacttcactaactacaattaataagcgtgttttagtaaatgaaattaattttaccatcaaaatcaacaca 9786091  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 393  Q
    |||||| ||||  |||| ||||||| ||| ||||||||| ||||||||||||||| ||| ||||||||    
T  9786092 attaatcatttccttaataatcgtgcacagaccttaaacgactattatttagagacggatggagtatt 9786159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 216 - 392
Target Start/End: Complemental strand, 11373565 - 11373387
Alignment:
Q  216 ccactgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctatt 314  Q
    ||||| |||||| |||||||| |||||||||||||| ||| |||||||||||||||||||||||| | |   ||||||||||| |||| ||||| | ||     
T  11373565 ccactattatactcttatttattgaatttcatccaacttaactactccactaactacaattaataagggtgttttagtaaatgctactaattttaccatc 11373466  T
Q  315 gaaatcaacacaatt-aatattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 392  Q
    ||||||||||||||| || ||||  |||| ||||||| |||| |||||||| |||| ||||  || | |||||||||||    
T  11373465 gaaatcaacacaattaaacatttccttaataatcgtgcacaatccttaaacgactaatattgtgaaacggagggagtat 11373387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 227 - 391
Target Start/End: Complemental strand, 34100672 - 34100507
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| ||||| |||||||| ||| ||||| || |||||||||||||||     | ||||||||||| |||| ||||| |||||||||||||||||    
T  34100672 ccttatttattgaatgtcatccaacttaactacttcagtaactacaattaataaagatattttagtaaatgctactaattttactattgaaatcaacaca 34100573  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||||| ||||| |||| ||||||  ||||| |||||||||||| ||||  |||| ||| ||||||    
T  34100572 attaatcattttcttaataatcgttgacaaatcttaaacaactaatattgtgagacggatggagta 34100507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 44180269 - 44180374
Alignment:
Q  287 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggag 385  Q
    |||||||||| ||||| ||||| | ||||||||||||||||||||| ||||| |||| ||||||||| ||||||||||| ||||||||||||||| ||||    
T  44180269 tttagtaaattatactaattttaccattgaaatcaacacaattaatcattttcttaataatcgtgtataaaccttaaacgactattatttagagacggag 44180368  T
Q  386 ggagta 391  Q
     |||||    
T  44180369 agagta 44180374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 229 - 391
Target Start/End: Original strand, 7463219 - 7463382
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| |||||||||||||| ||| |||||||||||||||||||||||  | | | || |||||||| |||| |||||   |||||||||||||||||    
T  7463219 ttatttattgaatttcatccaacttaactactccactaactacaattaatgagggtatttaagtaaatgctactaattttatcattgaaatcaacacaat 7463318  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||| ||||  |||| || |||| |||| |||||||| |||| ||||  |||| ||||||||||    
T  7463319 taatcatttccttaataaccgtgcacaatccttaaacgactaatattacgagacggagggagta 7463382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 374
Target Start/End: Complemental strand, 21350764 - 21350605
Alignment:
Q  214 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| ||||||| ||||||| |||||||||||||| ||| |||||||||||||||||||||||| | |   ||||||||||   |||  |||| | |    
T  21350764 ttccactattatacccttatttattgaatttcatccaacttaactactccactaactacaattaataagggtgttttagtaaatacaactatttttacca 21350665  T
Q  313 ttgaaatcaacacaattaatattttgttaagaatcgtgtacaaaccttaaacaactattatt 374  Q
    ||||||||||||||||||  ||||  |||| ||||||| ||||||||||||| |||| ||||    
T  21350664 ttgaaatcaacacaatta--atttccttaataatcgtgcacaaaccttaaacgactaatatt 21350605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 214 - 380
Target Start/End: Original strand, 16904369 - 16904537
Alignment:
Q  214 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| ||||||| ||||||| ||||||| |||||| |||  || | ||||||||| |||||||| | | | ||||| || ||||| | ||||| |||    
T  16904369 ttccactattatacccttatttattgaatttgatccaacttaattatttcactaactataattaatacgagtattttagaaagtgataataattttacta 16904468  T
Q  313 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 380  Q
    |||||||||||||||||||| ||||| |||| |||  || ||||||||||||| |||||||||| ||||    
T  16904469 ttgaaatcaacacaattaatcattttcttaaaaattttgcacaaaccttaaacgactattattttgaga 16904537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 227 - 369
Target Start/End: Complemental strand, 3178329 - 3178186
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||||||||||||   |   |||||||||||||| | ||||| | ||  |||||||||||    
T  3178329 ccttatttattgaatttcatccaacttaactactccactaactacaattaataaaggtgttttagtaaatgatattaattttaccatcaaaatcaacaca 3178230  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaacta 369  Q
    || ||| ||||  |||| |||| || ||||||||||||||||||    
T  3178229 atcaatcatttacttaataatcatgcacaaaccttaaacaacta 3178186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 228 - 362
Target Start/End: Complemental strand, 41506189 - 41506054
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    |||||||| |||||||||||||| ||| |||||||||||||||||||||||| | |   ||||||||||| |||| ||||| | ||| |||| |||||||    
T  41506189 cttatttattgaatttcatccaacttaactactccactaactacaattaataagagtgttttagtaaatgctactaattttaccattaaaattaacacaa 41506090  T
Q  328 ttaat-attttgttaagaatcgtgtacaaaccttaa 362  Q
    ||||| ||||  |||| ||||||| | |||||||||    
T  41506089 ttaatcatttccttaataatcgtgcataaaccttaa 41506054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 227 - 380
Target Start/End: Complemental strand, 759216 - 759062
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||||||| ||| ||||||| |||||||||||||||| |     ||||||||||||||||  |||| | ||  |||||||||||    
T  759216 ccttatttattgaatttcatccaacttaactactccgctaactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaatcaacaca 759117  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 380  Q
    |||||| ||||  |||| ||| ||| | ||||||||||  |||||||||||||||    
T  759116 attaatcatttccttaataattgtgcataaaccttaaatgactattatttagaga 759062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 214 - 374
Target Start/End: Original strand, 22738691 - 22738853
Alignment:
Q  214 ttccactgttatacctt-atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| ||||||||| ||||| | |||||||||||| ||| ||| || ||||||||||||||||  |   | |||||||||||||||| ||||| | |    
T  22738691 ttccactattatacctttatttattaaatttcatccaacttaactaatctactaactacaattaatgaggatattttagtaaatgatactaattttacca 22738790  T
Q  313 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 374  Q
    |||||||| ||||||||||| ||||  |||| ||||||| | ||||||||||| |||| ||||    
T  22738791 ttgaaatctacacaattaatcatttctttaataatcgtgcataaaccttaaacgactaatatt 22738853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 214 - 374
Target Start/End: Complemental strand, 46478432 - 46478270
Alignment:
Q  214 ttccactgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| |||||| |||||||| |||||||||||||| ||| |||||| | ||||||||||||||| | | | ||||||||||| |||| | ||| |||    
T  46478432 ttccactattatactcttatttattgaatttcatccaacttaactactcaattaactacaattaataagggtattttagtaaatgctactaactttacta 46478333  T
Q  313 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 374  Q
    || |||| |||||||||||| ||||  |||| |||||||||  ||| |||||| |||| ||||    
T  46478332 ttaaaattaacacaattaatcatttaattaataatcgtgtatgaactttaaacgactaatatt 46478270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 239 - 391
Target Start/End: Original strand, 5524396 - 5524549
Alignment:
Q  239 aatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-atttt 337  Q
    |||||||||||| ||| |||||| |||||||| ||||||||   |   |||| |||||| |||| ||||| | ||||||||||||||||||||| |||||    
T  5524396 aatttcatccaacttaactactcaactaactataattaataaaagtgttttattaaatgttactaattttaccattgaaatcaacacaattaatcatttt 5524495  T
Q  338 gttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
     |||| ||||||| |||||| |||||| || | ||||  |||||||||||||||    
T  5524496 cttaataatcgtgcacaaactttaaacgacaaatattgtgagatggagggagta 5524549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 229 - 364
Target Start/End: Original strand, 30865973 - 30866109
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| ||||||||||| || ||| |||||||||||| || |||||||| | | | |||||||||||||| | ||| | | |||||||| ||||||||    
T  30865973 ttatttattgaatttcatctaacttaactactccactaattataattaataagagtattttagtaaatgatattaattataccattgaaattaacacaat 30866072  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaac 364  Q
    |||| ||||  |||| ||||||| |||||||||||||    
T  30866073 taatcatttctttaataatcgtgcacaaaccttaaac 30866109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 228 - 391
Target Start/End: Original strand, 23670491 - 23670654
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    |||||||| | ||||||||| || ||| |||||||||||||||| ||||||| | |   ||||||||||| || | ||||| | || |||||||||||||    
T  23670491 cttatttattaaatttcatcaaacttaactactccactaactaccattaataagagtgttttagtaaatgctattaattttaccatggaaatcaacacaa 23670590  T
Q  328 ttaatattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    ||||||||   |||| ||| ||| ||||||||||||| | || ||||  |||| ||||||||||    
T  23670591 ttaatattcccttaataattgtgcacaaaccttaaacgattaatattgtgagacggagggagta 23670654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 227 - 369
Target Start/End: Complemental strand, 32346177 - 32346034
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||| ||| ||| |||||||||||| || |||||||| | | | ||||||| |||||| | ||||| | |||||||||||||||    
T  32346177 ccttatttattgaatttcattcaacttaactactccactaattataattaataagagtattttagtagatgatattaattttaccattgaaatcaacaca 32346078  T
Q  327 attaa-tattttgttaagaatcgtgtacaaaccttaaacaacta 369  Q
    || || |||||  |||| || |||  ||||||||||||||||||    
T  32346077 atcaattatttccttaataaccgtacacaaaccttaaacaacta 32346034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 375
Target Start/End: Original strand, 2459475 - 2459622
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||||| | ||| |||||||||||||||||||||||| | |   | |||||||||  ||| ||||| |  ||||||||||||||    
T  2459475 ccttatttattgaatttcatcctacttaactactccactaactacaattaataagggtgttgtagtaaatg--actaattttaccgttgaaatcaacaca 2459572  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattattt 375  Q
    |||||| ||||  |||| ||||||| |||||| |||||| |||| |||||    
T  2459573 attaatcatttccttaataatcgtgcacaaacattaaacgactaatattt 2459622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 228 - 381
Target Start/End: Original strand, 27920993 - 27921147
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    |||||| | |||| ||||||||| ||| ||| | |||||||||||||||||| | |   |||| ||||||||||| ||||| | ||| ||||||||| ||    
T  27920993 cttattgattgaacttcatccaacttaactaatgcactaactacaattaataagagtgttttaataaatgatactaattttaccattaaaatcaacataa 27921092  T
Q  328 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagat 381  Q
    ||||| ||||| |||| ||  ||| |  |||||||||||||||||||||||||||    
T  27921093 ttaatcattttcttaataactgtgcatcaaccttaaacaactattatttagagat 27921147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 237 - 369
Target Start/End: Complemental strand, 21760099 - 21759966
Alignment:
Q  237 tgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-att 335  Q
    |||||||||||||| ||| |||||||| |||||||||||| || | |   |||| ||||||||||| ||||| | ||  ||||||||||||||||| |||    
T  21760099 tgaatttcatccaacttaactactccattaactacaattagtaagggtgttttattaaatgatactaattttaccatcaaaatcaacacaattaatcatt 21760000  T
Q  336 ttgttaagaatcgtgtacaaaccttaaacaacta 369  Q
    || |||| |||| || ||||||||||||| ||||    
T  21759999 ttcttaataatcatgcacaaaccttaaacgacta 21759966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 229 - 364
Target Start/End: Original strand, 38391754 - 38391890
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| |||||||||||||| |||  || |||||||||||||||||| | | |   |||||||||||||||| ||||| | ||  |||||||||||||    
T  38391754 ttatttattgaatttcatccaacttaattattccactaactacaattaacaagagtgttttagtaaatgatactaattttaccatcaaaatcaacacaat 38391853  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaac 364  Q
    |||| ||||| |||| ||| ||| | |||||||||||    
T  38391854 taatcattttcttaataattgtgcataaaccttaaac 38391890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 392
Target Start/End: Original strand, 40076322 - 40076485
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||||||| ||| ||| ||   ||| |||||||||||   |   |||||||||||||||| ||||| | ||  |||| ||||||    
T  40076322 ccttatttattgaatttcatccaacttaactaatc---taagtacaattaataatagtgttttagtaaatgatactaattttaccatcaaaattaacaca 40076418  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 392  Q
    |||||| ||||  |||| ||||||| | ||||||||||| |||||||||||||||| || |||||||    
T  40076419 attaatcatttctttaataatcgtgcataaaccttaaacgactattatttagagattgaaggagtat 40076485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 229 - 391
Target Start/End: Original strand, 13961965 - 13962128
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| | |||||||||||| ||| ||||||||||||||||| |||||| |   | |||| ||| ||||| | |||||   ||| |||||||||||||    
T  13961965 ttatttattaaatttcatccaacttaactactccactaactacacttaataaggatattttattaagtgatattaattttatcattaaaatcaacacaat 13962064  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||| ||||  |||| || |||| | ||||||||||  ||||||||||||||  ||||||||||    
T  13962065 taatcatttccttaataaacgtgcataaaccttaaatgactattatttagaggcggagggagta 13962128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 243 - 393
Target Start/End: Complemental strand, 16560679 - 16560528
Alignment:
Q  243 tcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgtta 341  Q
    |||||||| ||| |||| ||||||||||||||||||| |     ||||||||||||||||  |||| | ||  |||| |||||||||||| ||||  |||    
T  16560679 tcatccaacttaactaccccactaactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaataaacacaattaatcatttcctta 16560580  T
Q  342 agaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 393  Q
    | ||||||| | ||| ||||||  ||||||||||||||| ||||||||||||    
T  16560579 ataatcgtgcataaatcttaaatgactattatttagagacggagggagtatt 16560528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 243 - 393
Target Start/End: Original strand, 16604983 - 16605134
Alignment:
Q  243 tcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgtta 341  Q
    |||||||| ||| |||| ||||||||||||||||||| |     ||||||||||||||||  |||| | ||  |||| |||||||||||| ||||  |||    
T  16604983 tcatccaacttaactaccccactaactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaataaacacaattaatcatttcctta 16605082  T
Q  342 agaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 393  Q
    | ||||||| | ||| ||||||  ||||||||||||||| ||||||||||||    
T  16605083 ataatcgtgcataaatcttaaatgactattatttagagacggagggagtatt 16605134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 269 - 391
Target Start/End: Original strand, 39452390 - 39452512
Alignment:
Q  269 tacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaatattttgttaagaatcgtgtacaaaccttaaacaact 368  Q
    ||||||||||| | | | |||||||||||||| | ||||| | ||| ||||||||| | | | |||||| ||||  || |||| |||||||||||| |||    
T  39452390 tacaattaataagggtattttagtaaatgatattaattttaccattaaaatcaacatattaattatttttttaaagattgtgtccaaaccttaaacgact 39452489  T
Q  369 attatttagagatggagggagta 391  Q
    |||||||||||||||||| ||||    
T  39452490 attatttagagatggaggaagta 39452512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 259 - 380
Target Start/End: Original strand, 42935697 - 42935819
Alignment:
Q  259 ctccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaac 357  Q
    ||||||||||||||||||||| | |   |||||||||||||| | ||||| | ||  ||||||||||||||||| ||||| |||| || |||| |  |||    
T  42935697 ctccactaactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacacaattaatcattttcttaataaccgtgcatcaac 42935796  T
Q  358 cttaaacaactattatttagaga 380  Q
    ||||||| |||||||||||||||    
T  42935797 cttaaacgactattatttagaga 42935819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 21390299 - 21390466
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| ||||||||||| || ||| ||||||||||||||||||| |||| |     |||||||||||||| |  |||| | ||  |||| ||||||    
T  21390299 ccttatttattgaatttcatctaacttaactactccactaactacaatcaataaggatgttttagtaaatgatattagttttaccatcaaaattaacaca 21390398  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaac--tattatttagagatggagggagta 391  Q
    |||||| ||||  |||| ||||||| | ||||||||||| ||  ||||||||||||| ||| ||||||    
T  21390399 attaatcatttccttaataatcgtgcataaaccttaaacgactgtattatttagagacggatggagta 21390466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 303
Target Start/End: Original strand, 25571423 - 25571499
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactc 303  Q
    ||||||||| |||||||||||||| ||| ||| |||||||||||||| ||||| | | | |||||||||||||||||    
T  25571423 ccttatttattgaatttcatccaacttaactattccactaactacaactaataagggtattttagtaaatgatactc 25571499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 229 - 363
Target Start/End: Original strand, 49101669 - 49101807
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactt---tagtaaatgatactcattttgctattgaaatcaacac 325  Q
    ||||||| |||||||||| ||| ||| |||||||||||||||||||||||||| | | ||   |||||||||||| | |||||    || |||| |||||    
T  49101669 ttatttattgaatttcattcaacttaactactccactaactacaattaatatgagtattttaatagtaaatgatattaattttatccttaaaataaacac 49101768  T
Q  326 aattaat-attttgttaagaatcgtgtacaaaccttaaa 363  Q
    ||||||| ||||| |||| ||||||  ||||||||||||    
T  49101769 aattaatcattttcttaaaaatcgtaaacaaaccttaaa 49101807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 369
Target Start/End: Complemental strand, 19271858 - 19271715
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| | | |||||||||| ||| ||||||||||||||||||||||||   | | |||||| ||||  ||| ||||    |||||||||||||||    
T  19271858 ccttatttattaattttcatccaacttaactactccactaactacaattaataaaagtattttagtcaatgccactaatttgatcattgaaatcaacaca 19271759  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaacta 369  Q
    |||||| ||||| |||| ||||||| |||| | |||||| ||||    
T  19271758 attaatcatttttttaataatcgtgcacaagcattaaacgacta 19271715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 330
Target Start/End: Complemental strand, 32018837 - 32018734
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| | ||||| |||||| |||  ||||| |||||| |||||||||| | | | ||||||||||||||   ||||| |||||||||||||||||    
T  32018837 ccttatttattaaatttaatccaacttaattactctactaacgacaattaataagagtattttagtaaatgatagaaattttactattgaaatcaacaca 32018738  T
Q  327 atta 330  Q
    ||||    
T  32018737 atta 32018734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 227 - 332
Target Start/End: Complemental strand, 32019041 - 32018935
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctatt-gaaatcaacac 325  Q
    ||||||||| | |||||||||||| |||  |||||||||||| |||||||||| | | | ||||||||||||||   ||||| |||||  ||||||||||    
T  32019041 ccttatttattaaatttcatccaacttaattactccactaacaacaattaataagagtattttagtaaatgatagaaattttactattcaaaatcaacac 32018942  T
Q  326 aattaat 332  Q
    |||||||    
T  32018941 aattaat 32018935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 332
Target Start/End: Original strand, 33819218 - 33819323
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||| ||| ||  ||||||||| ||| |||||||||| | |   ||| ||||||| |||| ||||| | |||||||||||||||    
T  33819218 ccttatttaatgaatttcattcaacttcactactccacaaacaacaattaataagagtgattttgtaaatgctactaattttaccattgaaatcaacaca 33819317  T
Q  327 attaat 332  Q
    ||||||    
T  33819318 attaat 33819323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 229 - 332
Target Start/End: Original strand, 43873929 - 43874032
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| | || ||||||||| ||| ||||||||||||||||| |||||| | |   |||||||||||||| | ||||| | ||  |||||||||||||    
T  43873929 ttatttattaaacttcatccaacttaactactccactaactacatttaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacacaat 43874028  T
Q  329 taat 332  Q
    ||||    
T  43874029 taat 43874032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 374
Target Start/End: Complemental strand, 7457560 - 7457398
Alignment:
Q  214 ttccactgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| |||||| |||||||| ||||||| ||  || |||  || ||| ||||||||| |||||| | |   |||||||||||  ||| ||||| | |    
T  7457560 ttccactattatactcttatttattgaatttaatttaacttaattattccgctaactacatttaataagggtcttttagtaaatgtaactaattttacca 7457461  T
Q  313 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 374  Q
    |||||||||||| ||||||| ||||| |||| ||||||| |||||| ||||| ||||| ||||    
T  7457460 ttgaaatcaacataattaatcatttttttaataatcgtgcacaaacattaaataactaatatt 7457398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 337
Target Start/End: Original strand, 37245694 - 37245803
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||||||| ||| | |||||||| | ||||||||||| | |   ||||||||||| |||| | ||| | ||||||||||||| |    
T  37245694 ccttatttattgaatttcatccaacttaaccactccacttattacaattaataagagtgttttagtaaatgctact-aatttaccattgaaatcaacaga 37245792  T
Q  327 attaatatttt 337  Q
    |||||| ||||    
T  37245793 attaatctttt 37245803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 393
Target Start/End: Original strand, 46211524 - 46211602
Alignment:
Q  316 aaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 393  Q
    ||||||||||||||||| ||||  |||| ||| ||| | ||||||||||| ||||||||||| ||| ||||||||||||    
T  46211524 aaatcaacacaattaatcatttccttaataattgtgcataaaccttaaacgactattatttaaagacggagggagtatt 46211602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 262 - 394
Target Start/End: Complemental strand, 2850971 - 2850838
Alignment:
Q  262 cactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaacctt 360  Q
    ||||||||| |||||||  | | | |||||||||| ||| | |||||   ||||||||||||| ||||||| ||||  |||| |||| || ||||||| |    
T  2850971 cactaactataattaatgagggtattttagtaaataatattaattttatcattgaaatcaacataattaatcatttccttaataatcatgcacaaaccat 2850872  T
Q  361 aaacaactattatttagagatggagggagtatta 394  Q
    |||| ||||| ||||||||| ||| |||||||||    
T  2850871 aaacgactataatttagagacggatggagtatta 2850838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 6495059 - 6495007
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 279  Q
    ||||||||| | |||||||||||| ||  ||||||||||||||||||||||||    
T  6495059 ccttatttattaaatttcatccaactttactactccactaactacaattaata 6495007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 324
Target Start/End: Complemental strand, 17828473 - 17828379
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaaca 324  Q
    ||||||| |||||| ||||||| |||  ||||||||||||||||||| ||| | | | ||| |||||||||| | ||||| | |||||||||||||    
T  17828473 ttatttattgaatt-catccaacttaattactccactaactacaattgataagagtaattttgtaaatgatattaattttaccattgaaatcaaca 17828379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 279
Target Start/End: Original strand, 35333057 - 35333099
Alignment:
Q  237 tgaatttcatccaatttagctactccactaactacaattaata 279  Q
    ||||||||||| || ||| ||||||||||||||||||||||||    
T  35333057 tgaatttcatctaacttaactactccactaactacaattaata 35333099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 363
Target Start/End: Original strand, 12631381 - 12631446
Alignment:
Q  299 tactcattttgctattgaaatcaacacaattaa-tattttgttaagaatcgtgtacaaaccttaaa 363  Q
    |||| ||||| ||||||||||||| |||||||| |||||  |||| ||||||| ||||||||||||    
T  12631381 tactaattttactattgaaatcaatacaattaattatttccttaataatcgtgcacaaaccttaaa 12631446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 391
Target Start/End: Original strand, 36790878 - 36790915
Alignment:
Q  354 aaaccttaaacaactattatttagagatggagggagta 391  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  36790878 aaaccttaaacgactattatttagagacggagggagta 36790915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 42796009 - 42796064
Alignment:
Q  227 ccttatttactgaatttcatccaatttagc---tactccactaactacaattaata 279  Q
    ||||||||| |||||||||||||| ||| |   |||||||||||||||||||||||    
T  42796009 ccttatttaatgaatttcatccaacttaacaactactccactaactacaattaata 42796064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 21937883 - 21937831
Alignment:
Q  256 ctactccactaactacaattaatatgtggactttagtaaatgatactcatttt 308  Q
    |||||||||||||||||||||||| | |  ||||||||||||| ||| |||||    
T  21937883 ctactccactaactacaattaataagagtgctttagtaaatgacactaatttt 21937831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 36790744 - 36790796
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 279  Q
    ||||||||| |||||||||||| |  || |||||| |||||||||||||||||    
T  36790744 ccttatttattgaatttcatccgacataactactcaactaactacaattaata 36790796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 380
Target Start/End: Complemental strand, 37850791 - 37850700
Alignment:
Q  287 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 380  Q
    |||||||||| ||||| |||||   ||| ||||||| || |||||| ||||| | || |||||||||||||| |||||||| |||||||| ||||    
T  37850791 tttagtaaatcatactaatttt---attaaaatcaataccattaattattttttaaaaaatcgtgtacaaactttaaacaattattattttgaga 37850700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 44424148 - 44424200
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 279  Q
    ||||||||| |||| ||||||||| |||  |||||||||||||||| ||||||    
T  44424148 ccttatttattgaacttcatccaacttaattactccactaactacatttaata 44424200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 277
Target Start/End: Complemental strand, 47045610 - 47045546
Alignment:
Q  214 ttccactgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaa 277  Q
    ||||||| |||||| |||||||  |||||||||||||| ||| ||||| ||||||| ||||||||    
T  47045610 ttccactattatactcttatttgttgaatttcatccaacttaactactacactaaccacaattaa 47045546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 4e-33; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 228 - 391
Target Start/End: Complemental strand, 10180065 - 10179901
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    |||||| | |||||||||| ||| ||| |||||||||||||||||||||||| ||| | |||||||||| ||||| ||||| | ||||||||||| ||||    
T  10180065 cttattaattgaatttcattcaacttaactactccactaactacaattaataagtgtattttagtaaattatactaattttaccattgaaatcaatacaa 10179966  T
Q  328 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
     || | ||||| |||| ||||||| ||||||||||||| |||||| |||||||| ||||||||||    
T  10179965 ctactcattttcttaataatcgtgcacaaaccttaaacgactattttttagagacggagggagta 10179901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 220 - 391
Target Start/End: Complemental strand, 34948813 - 34948641
Alignment:
Q  220 tgttataccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaat 319  Q
    |||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||  ||   ||  |||||||||||| ||||| ||||| ||||    
T  34948813 tgttataccttatttattgaatttcatccaacttaactactccactaactacaattaataaatgtgtttctgtaaatgatactaattttactatttaaat 34948714  T
Q  320 caacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    ||||||||||||| ||||  |||| ||| ||||||||| ||||||| | ||||||| | ||| ||| ||||||    
T  34948713 caacacaattaatcatttccttaataattgtgtacaaatcttaaacgattattattcaaagacggatggagta 34948641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 227 - 394
Target Start/End: Original strand, 31271018 - 31271186
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| ||||||| |||||| ||| ||||||||||||||| |||||||| | | | ||||||| |||||| | ||||| | ||| |||||||||||    
T  31271018 ccttatttattgaattttatccaacttaactactccactaactataattaataagagtattttagtatatgatattaattttaccattaaaatcaacaca 31271117  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatta 394  Q
    || ||| ||||| |||| ||||||  ||||||||||||| ||||| |||||||| |  |||||||||||    
T  31271118 atcaatcattttcttaataatcgtacacaaaccttaaacgactataatttagaggtttagggagtatta 31271186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 228 - 332
Target Start/End: Original strand, 42886998 - 42887102
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    |||||||| ||||||| |||||| ||| |||| |||||||||||||||||||   | | |||||||||||||||| ||||||||||||||||||||||||    
T  42886998 cttatttattgaattttatccaacttaactacgccactaactacaattaataaaggtattttagtaaatgatactaattttgctattgaaatcaacacaa 42887097  T
Q  328 ttaat 332  Q
    |||||    
T  42887098 ttaat 42887102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 260 - 380
Target Start/End: Original strand, 51143 - 51263
Alignment:
Q  260 tccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaacc 358  Q
    ||||||||||||||||||||  ||   ||| |||||||||||| ||||| | ||| ||||||||||||||||| ||||| |||| ||||||| |||||||    
T  51143 tccactaactacaattaataaatgtgtttttgtaaatgatacttattttac-attaaaatcaacacaattaatcattttcttaataatcgtgcacaaacc 51241  T
Q  359 ttaaacaactattatttagaga 380  Q
    ||||||||||||||||||||||    
T  51242 ttaaacaactattatttagaga 51263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 229 - 391
Target Start/End: Complemental strand, 11977053 - 11976890
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| ||||||||||| || ||| |||||| ||||||||||||||||| | | | ||||||||||| |||| ||| | | |||||||||||||||||    
T  11977053 ttatttattgaatttcatctaacttaactactctactaactacaattaataagggtattttagtaaatgctactgattataccattgaaatcaacacaat 11976954  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||| ||||   ||| |||| || ||||||||||||| |||| ||||  |||| ||||||||||    
T  11976953 taatgatttccataataatcatgcacaaaccttaaacgactaatattatgagacggagggagta 11976890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 214 - 332
Target Start/End: Complemental strand, 44761627 - 44761508
Alignment:
Q  214 ttccactgttatacctt-atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| ||||||| | ||||| |||||||||||||| ||| |||||||||||||||||||||||| | |   ||||||||||| |||| ||||| | |    
T  44761627 ttccactattataccctcatttattgaatttcatccaacttaactactccactaactacaattaataagggtgttttagtaaatgctactaattttacca 44761528  T
Q  313 ttgaaatcaacacaattaat 332  Q
    ||||||||||||||||||||    
T  44761527 ttgaaatcaacacaattaat 44761508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 229 - 380
Target Start/End: Complemental strand, 17719375 - 17719223
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| | |||||||||||| ||| ||||||||||||||| |||||||| |   | |||||||||| ||||| | ||| | ||| ||||||  |||||    
T  17719375 ttatttattaaatttcatccaacttaactactccactaactataattaataaggatattttagtaaataatactaactttaccattaaaatcattacaat 17719276  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 380  Q
    |||| ||||| |||| ||||||| ||||| ||||||| |||||||||||||||    
T  17719275 taatcatttttttaataatcgtgcacaaatcttaaacgactattatttagaga 17719223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 229 - 399
Target Start/End: Complemental strand, 27294176 - 27294005
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| |||||||||||||| |||  ||||||||||||| |||||||||  |  | ||||||||| |||||| |||||   ||| |||| ||||||||    
T  27294176 ttatttattgaatttcatccaacttaattactccactaactgcaattaataaatatattttagtaaaagatactaattttatcattcaaatgaacacaat 27294077  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtattatctaa 399  Q
    |||| | ||  |||| ||||||| ||||||||||| |||||||||||| ||||  || ||||||||| ||||    
T  27294076 taataacttctttaaaaatcgtgcacaaaccttaaccaactattattttgagaccgaaggagtattaactaa 27294005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 227 - 392
Target Start/End: Original strand, 39482612 - 39482778
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||| | | ||| ||| ||||||||||| |||||||| | |   ||||||||||  |||| ||||| |  ||||||||||||||    
T  39482612 ccttatttattgaatttcattccacttaactagtccactaactataattaataagggtgttttagtaaattctactaattttacccttgaaatcaacaca 39482711  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 392  Q
    |||||| ||||| |||| ||||||| ||||| ||||||| |||| ||||  |||| |||||||||||    
T  39482712 attaatcattttcttaataatcgtgcacaaatcttaaacgactaatattgtgagacggagggagtat 39482778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 227 - 391
Target Start/End: Complemental strand, 9300232 - 9300067
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||| ||| ||| ||||||||||||||| |||||||| | |   ||||||||||| || | ||||| | ||| |||||||||||    
T  9300232 ccttatttattgaatttcattcaacttaactactccactaactaaaattaataagggtgttttagtaaatgctattaattttaccattaaaatcaacaca 9300133  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |  ||| ||||| |||| ||||||| | |||||||||||||  | ||||  |||||||||||||||    
T  9300132 aacaatcattttcttaataatcgtgcataaaccttaaacaatcaatattgtgagatggagggagta 9300067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 232 - 364
Target Start/End: Complemental strand, 21216215 - 21216082
Alignment:
Q  232 tttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaa 331  Q
    |||| |||||||||||||| ||| |||||||||||||||||||||||| |     |||||||||||  ||| ||||| | ||||||||||||||||||||    
T  21216215 tttattgaatttcatccaacttaactactccactaactacaattaataaggatgttttagtaaatgcaactaattttaccattgaaatcaacacaattaa 21216116  T
Q  332 t-attttgttaagaatcgtgtacaaaccttaaac 364  Q
    | ||||  |||| |||| || |||||||||||||    
T  21216115 tcatttccttaataatcatgcacaaaccttaaac 21216082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 214 - 380
Target Start/End: Original strand, 7172897 - 7173065
Alignment:
Q  214 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| ||||||| ||||||| |||||||||| ||| ||| ||||| || |||||||||||||||  |    ||||||||||| |||| |||||   |    
T  7172897 ttccactattatacccttatttattgaatttcattcaacttaactacttcattaactacaattaataaatatgttttagtaaatgctactaattttatca 7172996  T
Q  313 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 380  Q
    |||||||||||||||||||| ||||  |||| |||  |  ||||||||||||||||||| |||||||||    
T  7172997 ttgaaatcaacacaattaatcatttctttaataatgatacacaaaccttaaacaactataatttagaga 7173065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 227 - 394
Target Start/End: Complemental strand, 40996484 - 40996316
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||||||| ||| | | | |||||||||||||||||| | |   |||||||||||| ||| ||||| |  |  |||||||||||    
T  40996484 ccttatttattgaatttcatccaacttaaccatttcactaactacaattaataagggtgttttagtaaatgaaactaattttacattcaaaatcaacaca 40996385  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatta 394  Q
    |||||| ||||  |||| ||| ||| | ||||||||||| | ||||||||||||| ||| |||||||||    
T  40996384 attaatcatttccttaacaattgtgcataaaccttaaacgattattatttagagacggatggagtatta 40996316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 229 - 391
Target Start/End: Complemental strand, 10098108 - 10097945
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| |||| ||||||||| ||| |||||||||||||||||||||||| | |   | |||||||||||| | ||||| | ||  ||||||| |||||    
T  10098108 ttatttattgaacttcatccaacttaactactccactaactacaattaataagggtgttatagtaaatgatattaattttaccatcaaaatcaatacaat 10098009  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||| ||||| |||| || | || |  |||||||||| ||||||||||||| | ||||||||||    
T  10098008 taatcattttcttaataaccatgcatcaaccttaaacgactattatttagatacggagggagta 10097945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 380
Target Start/End: Original strand, 32476284 - 32476438
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| ||||||||||| || ||| ||||| || ||||||||||||||| | | | |||| ||||||||| | |||||   ||||||||||||| |    
T  32476284 ccttatttattgaatttcatcaaacttaactacttcattaactacaattaataagggtattttaataaatgatattaattttatcattgaaatcaacaga 32476383  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 380  Q
    || ||| ||||| |||| || |||| ||||||||||||| ||| | |||||||||    
T  32476384 atcaatcattttcttaataaccgtgcacaaaccttaaacgactttaatttagaga 32476438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 369
Target Start/End: Complemental strand, 1875676 - 1875568
Alignment:
Q  262 cactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaacctt 360  Q
    |||||||||||||||||| | |   ||||||||||| |||| ||||| | ||||||||||||||||||||| ||||  |||| ||||||| |||||||||    
T  1875676 cactaactacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcacaaacctt 1875577  T
Q  361 aaacaacta 369  Q
    |||| ||||    
T  1875576 aaacgacta 1875568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 231 - 393
Target Start/End: Original strand, 13335217 - 13335380
Alignment:
Q  231 atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaatta 330  Q
    ||||| ||||||||||| || ||| |||||| ||||||| |||||||||  ||   |||| ||||||||||| ||||| | ||  |||||||||||||||    
T  13335217 atttattgaatttcatcaaacttaactactctactaactgcaattaataaatgtgttttactaaatgatactaattttaccatcaaaatcaacacaatta 13335316  T
Q  331 a-tattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 393  Q
    |  ||||  |||| ||||||| | ||||||||||| | ||||||||||||| | | ||||||||    
T  13335317 accatttccttaataatcgtgcataaaccttaaacgattattatttagagaagaatggagtatt 13335380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 363
Target Start/End: Complemental strand, 42972595 - 42972490
Alignment:
Q  259 ctccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaac 357  Q
    |||||||||||| |||||||| | | | ||||||||| |||| | ||||| | ||||||||||| ||||||||| ||||| |||| ||||||| ||||||    
T  42972595 ctccactaactataattaataagggtattttagtaaacgatattaattttaccattgaaatcaaaacaattaatcattttcttaataatcgtgcacaaac 42972496  T
Q  358 cttaaa 363  Q
    ||||||    
T  42972495 cttaaa 42972490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 228 - 332
Target Start/End: Complemental strand, 5053271 - 5053167
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    |||||||| ||||| |||||||||||| ||||||| |||||||||||||||| |     |||||||||||||| | ||||| | ||  ||||||||||||    
T  5053271 cttatttattgaatctcatccaatttaactactccgctaactacaattaataagactgttttagtaaatgatattaattttaccatcaaaatcaacacaa 5053172  T
Q  328 ttaat 332  Q
    |||||    
T  5053171 ttaat 5053167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 393
Target Start/End: Original strand, 39405759 - 39405926
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| | |||||||| ||| |||  |||||||||||||  ||||||||     | | |||||||||||||| |||||   |||||||| ||||||    
T  39405759 ccttatttatttaatttcattcaacttaattactccactaactgtaattaataaagatattatagtaaatgatactaattttatcattgaaattaacaca 39405858  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 393  Q
    |||||| ||||  |||| ||||||| ||||||||||||| |||| ||||  |||| ||| ||||||||    
T  39405859 attaatcatttccttaataatcgtgcacaaaccttaaacgactaatattgtgagacggatggagtatt 39405926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 391
Target Start/End: Complemental strand, 45425799 - 45425620
Alignment:
Q  214 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| ||||||| ||||||| |||||||||| ||| |||  ||||||||||||||||||||||| |     |||| |||||| || | ||||| | |    
T  45425799 ttccactattatacccttatttattgaatttcatacaacttaattactccactaactacaattaataagaatgttttaataaatgttattaattttacca 45425700  T
Q  313 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    || ||||||||||||||||| ||||| |||| |||| || | ||| ||||||| |||| ||||  |||| ||| ||||||    
T  45425699 ttaaaatcaacacaattaatcattttcttaataatcatgcataaaacttaaacgactaatattatgagacggaaggagta 45425620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 229 - 382
Target Start/End: Complemental strand, 4428468 - 4428315
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| ||||||||||| || ||| ||| | ||||||||||||||||||  || | |||||||||||||| | |||||   ||| ||||||||||||     
T  4428468 ttatttattgaatttcatctaacttaactaattcactaactacaattaataattgtattttagtaaatgataataattttatcattaaaatcaacacaaa 4428369  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatg 382  Q
    |||| ||||| |||| |||  |  | ||||||||||| |||||||||| ||||||    
T  4428368 taatcattttcttaaaaat-atacataaaccttaaacgactattattttgagatg 4428315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 29226647 - 29226595
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 279  Q
    ||||||||| ||||||||||| || ||| ||||||||||||||||||||||||    
T  29226647 ccttatttattgaatttcatctaacttaactactccactaactacaattaata 29226595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 229 - 391
Target Start/End: Original strand, 31082618 - 31082781
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| | |||||||||||| ||| ||||||||||||||| |||||||| | |   ||||||||||   ||| |||||   ||| ||||||| |||||    
T  31082618 ttatttattaaatttcatccaacttaactactccactaactataattaataagggtgttttagtaaataccactaattttatcattaaaatcaagacaat 31082717  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||| ||||  ||||  |||||| ||||||| |||||||||| ||||  |||| || |||||||    
T  31082718 taatcatttccttaattatcgtgcacaaaccataaacaactaatattgtgagacggcgggagta 31082781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 32678401 - 32678452
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaata 279  Q
    |||||||| | |||||||||||| ||| ||||||||||||||||||||||||    
T  32678401 cttatttatttaatttcatccaacttaactactccactaactacaattaata 32678452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 316 - 382
Target Start/End: Original strand, 32678804 - 32678871
Alignment:
Q  316 aaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatg 382  Q
    ||||||||||||||||| ||||  |||| ||||||||| |||| |||||| |||||||||||||||||    
T  32678804 aaatcaacacaattaatcatttccttaataatcgtgtataaactttaaacgactattatttagagatg 32678871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 331
Target Start/End: Original strand, 17823920 - 17824022
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| | |||||||||||| ||| ||||| ||||||||||||||||||   | | | ||||||| |||||| |||||   |||||||||||||| ||    
T  17823920 ttatttatttaatttcatccaacttaactacttcactaactacaattaataaaggtattctagtaaaagatactaattttatcattgaaatcaacacgat 17824019  T
Q  329 taa 331  Q
    |||    
T  17824020 taa 17824022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 31231727 - 31231893
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||| || |||||| ||| |||||||||||||||||||||||| | |   || ||||||||||| | ||||| | ||  ||||| |||||    
T  31231727 ccttatttattgaactttatccaacttaactactccactaactacaattaataagggtgtttcagtaaatgatattaattttaccatcaaaatcgacaca 31231826  T
Q  327 attaat-attttgttaagaatcgtgta-caaaccttaaacaactattatttagagatggagggagta 391  Q
    ||| || ||||  |||| || |||| | ||| | |||||  ||||||||||||||| ||||||||||    
T  31231827 attcatcatttccttaataaccgtgcatcaacctttaaaagactattatttagagacggagggagta 31231893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 376
Target Start/End: Original strand, 36967418 - 36967508
Alignment:
Q  287 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattattta 376  Q
    |||||||||||||| | ||||| | ||  ||||||||||||||||| ||||  |||| ||||||| | ||||||||||| |||||||||||    
T  36967418 tttagtaaatgatattaattttaccatcaaaatcaacacaattaatcatttccttaataatcgtgcataaaccttaaacgactattattta 36967508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 227 - 332
Target Start/End: Complemental strand, 396730 - 396625
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||| | ||||||| ||||||| || ||||| || ||||||||||||||| |   | | |||||||||||||| ||||| |  |||||||||||| |    
T  396730 ccttattaattgaattttatccaatataactacttcattaactacaattaataaggatattgtagtaaatgatactaattttaccgttgaaatcaacata 396631  T
Q  327 attaat 332  Q
    ||||||    
T  396630 attaat 396625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 2767350 - 2767242
Alignment:
Q  287 tttagtaaatgatactcattttgctattgaaatcaacacaattaa-tattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggag 385  Q
    |||| ||||||||||| ||||| | ||  |||||||||||||||| |||||  |||| || |||| |  ||||| ||||||||| |||||||||| || |    
T  2767350 tttaataaatgatactaattttaccatcaaaatcaacacaattaattatttccttaataaccgtgcatcaacctcaaacaactactatttagagacgggg 2767251  T
Q  386 ggagtatta 394  Q
    |||||||||    
T  2767250 ggagtatta 2767242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 389
Target Start/End: Complemental strand, 39301000 - 39300894
Alignment:
Q  287 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaacta---ttatttagagatg 382  Q
    |||||||||||||| | ||||| | || |||||||||| ||||||| ||||  |||| ||||||  ||||| ||||||| ||||   |||||||||||||    
T  39301000 tttagtaaatgatattaattttaccatcgaaatcaacataattaatcatttctttaataatcgtacacaaatcttaaacgactactattatttagagatg 39300901  T
Q  383 gagggag 389  Q
    |||||||    
T  39300900 gagggag 39300894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 332
Target Start/End: Original strand, 41092028 - 41092096
Alignment:
Q  264 ctaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat 332  Q
    |||||||||||||||| | | | |||| ||||||||| | ||||| | |||||||||||||||||||||    
T  41092028 ctaactacaattaataagagtattttaataaatgatattaattttaccattgaaatcaacacaattaat 41092096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 373
Target Start/End: Complemental strand, 7703215 - 7703128
Alignment:
Q  287 tttagtaaatgatactcattttgctattgaaatcaacacaattaa-tattttgttaagaatcgtgtacaaaccttaaacaactattat 373  Q
    |||||||||||||| | ||||| | |||||||||||||||||||| |||||  |||| |||| |  |||||| |||||| ||||||||    
T  7703215 tttagtaaatgatattaattttaccattgaaatcaacacaattaattatttccttaataatcttacacaaactttaaacgactattat 7703128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 332
Target Start/End: Complemental strand, 22771954 - 22771849
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| ||||||||||||||  ||  |||| |||||||||||||||||| | |   |||| ||||||| ||| ||||| | ||  |||||||| ||    
T  22771954 ccttatttattgaatttcatccaacataattacttcactaactacaattaataagggtgttttaataaatgacactaattttaccatcaaaatcaaccca 22771855  T
Q  327 attaat 332  Q
    ||||||    
T  22771854 attaat 22771849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 301
Target Start/End: Original strand, 35732119 - 35732192
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatac 301  Q
    ||||| || ||||||||||| || ||  |||||||||||| ||||||||||| | | | |||||||||||||||    
T  35732119 cttatatattgaatttcatctaactttactactccactaattacaattaataggagtattttagtaaatgatac 35732192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 391
Target Start/End: Original strand, 6611779 - 6611859
Alignment:
Q  312 attgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    ||||||||||||| ||||||| ||||| |||| ||||||||  ||| ||||||| |||| ||||   ||||||||||||||    
T  6611779 attgaaatcaacataattaatcatttttttaataatcgtgtgtaaatcttaaacgactaatattgtaagatggagggagta 6611859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 2e-32; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 229 - 391
Target Start/End: Complemental strand, 38405224 - 38405061
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| |||||||||||||| ||| |||| ||||||||||||||||||| | | | |||||||||||||| | ||||| | ||| ||||||||| |||    
T  38405224 ttatttattgaatttcatccaacttaactacaccactaactacaattaataagggtattttagtaaatgatattaattttaccatttaaatcaacagaat 38405125  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||| ||||  |||| ||||||| ||||||||||||| ||||| ||||||||| ||||||||||    
T  38405124 taatcatttccttaataatcgtgcacaaaccttaaacgactataatttagagacggagggagta 38405061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 227 - 392
Target Start/End: Complemental strand, 49428466 - 49428300
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||||||| |||  ||||||||||||||||||||||| | | | |||||||||| ||| | ||||| | |||||||||||||||    
T  49428466 ccttatttattgaatttcatccaacttaattactccactaactacaattaataagggtattttagtaaattatattaattttaccattgaaatcaacaca 49428367  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 392  Q
    | |||| ||||  |||| ||||||| | ||||||||||| ||||| ||||||||| |||||||||||    
T  49428366 aataatcatttccttaataatcgtgcaaaaaccttaaacgactataatttagagacggagggagtat 49428300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 229 - 386
Target Start/End: Original strand, 2653419 - 2653575
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| | |||||||||||||||| |||||||  ||||||||||||||| | | | |||| ||||||||||| ||||| | |||||||||||||||||    
T  2653419 ttatttattaaatttcatccaatttaactactcctttaactacaattaataagagtattttaataaatgatactaattttacaattgaaatcaacacaat 2653518  T
Q  329 taatattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagg 386  Q
    ||||  ||| |||| |||| || ||||| ||||||||||||||||||||||| |||||    
T  2653519 taatcattt-ttaataatcatgcacaaatcttaaacaactattatttagagacggagg 2653575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 227 - 391
Target Start/End: Complemental strand, 33790855 - 33790690
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| | |   ||||| |||||| ||| ||||| | ||  |||||||||||    
T  33790855 ccttatttattgaatttcatccaacttaactactccactaactacaattaataagggtgttttagcaaatgaaactaattttaccatcaaaatcaacaca 33790756  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||||| ||||| |||| ||||||| | ||||||||||| ||||||||||||||| | ||||||||    
T  33790755 attaatcattttcttaataatcgtgcataaaccttaaacgactattatttagagacgaagggagta 33790690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 228 - 392
Target Start/End: Complemental strand, 52247551 - 52247386
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    |||||||| |||||||||| ||| ||| |||||||||||||||||||||||| |   | ||||||||||  || | ||||| | |||||||| |||||||    
T  52247551 cttatttaatgaatttcattcaacttaactactccactaactacaattaataaggatattttagtaaattgtattaattttaccattgaaattaacacaa 52247452  T
Q  328 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 392  Q
    ||||| ||||| |||| ||||||| |||| |||||||| ||||| ||||||||| |||||||||||    
T  52247451 ttaatcattttcttaataatcgtgcacaatccttaaacgactataatttagagacggagggagtat 52247386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 214 - 392
Target Start/End: Original strand, 32884784 - 32884964
Alignment:
Q  214 ttccactgttata-ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| ||||| ||||||||| |||||| ||||||| ||| |||||||||||||||||||||||| | |   |||| |||||| |||| ||| | | |    
T  32884784 ttccactattatatccttatttattgaattccatccaacttaactactccactaactacaattaataagagtgttttactaaatgctactaattctacca 32884883  T
Q  313 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 392  Q
    |||||||||||||||||||| ||||| |||| ||||||| ||||||||||||| |||| ||||  |||| ||||| |||||    
T  32884884 ttgaaatcaacacaattaatcattttcttaataatcgtgcacaaaccttaaacgactaatattgtgagacggaggaagtat 32884964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 214 - 391
Target Start/End: Complemental strand, 17237434 - 17237255
Alignment:
Q  214 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| ||||||| ||||||| |||||||||||||| ||| |||||||||||||||||||||||| |     ||||||||||| |||| ||||| | |    
T  17237434 ttccactattatacccttatttattgaatttcatccaacttaactactccactaactacaattaataaggttgttttagtaaatgttactaattttacca 17237335  T
Q  313 ttgaaatcaacacaattaa-tattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    ||| ||||||||||||||| |||||| |||| |||| || ||||||||||||  |||| ||||  |||| ||||||||||    
T  17237334 ttgcaatcaacacaattaattattttcttaataatcatgcacaaaccttaaatgactagtattgtgagacggagggagta 17237255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 214 - 391
Target Start/End: Complemental strand, 47464503 - 47464324
Alignment:
Q  214 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| ||||||| ||||||| |||||||||||||| ||| ||||||||| |||||||||||||| | |   ||||||||||| |||| ||||| | |    
T  47464503 ttccactattatacccttatttattgaatttcatccaacttaactactccaccaactacaattaataagagttttttagtaaatgctactaattttacca 47464404  T
Q  313 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||||||||||||||||||| ||||  |||| |||||||  |||||||||||| |||| ||||  ||||| ||| |||||    
T  47464403 ttgaaatcaacacaattaatcatttccttaataatcgtgctcaaaccttaaacgactaatattgtgagatagagagagta 47464324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 229 - 394
Target Start/End: Complemental strand, 11907721 - 11907555
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| |||| ||||||||| ||| |||||||| ||||||||||||||| | |   |||||||||||||||| ||||| | ||  |||||||||||||    
T  11907721 ttatttattgaacttcatccaacttaactactccaataactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaat 11907622  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatta 394  Q
    |||| ||||  |||| ||||||| |  |||||||||  ||||||||||||||| |||||||||||||    
T  11907621 taatcatttccttaataatcgtgcattaaccttaaatgactattatttagagacggagggagtatta 11907555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 36985783 - 36985948
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||||||| |||  || || ||||||||||||||||| | | | |||||||||||||||| ||||| | |||||||||||||||    
T  36985783 ccttatttattgaatttcatccaacttaattattctactaactacaattaatacgggtattttagtaaatgatactaattttaccattgaaatcaacaca 36985882  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||||| ||||  | || |||||| || ||| ||||||| | |||||||| |||| ||||||||||    
T  36985883 attaatcatttcctgaaaaatcgtataaaaatcttaaacgagtattattttgagacggagggagta 36985948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 227 - 391
Target Start/End: Complemental strand, 47773143 - 47772978
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||| ||||||||| ||| |||||||||||||||||||||||| | |   |||||||||||||||| ||||| | ||  |||||||||||    
T  47773143 ccttatttattgaacttcatccaacttaactactccactaactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacaca 47773044  T
Q  327 attaa-tattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    ||||| |||||  |||| ||  ||| |  |||||||||| ||||||||||||||| ||||||||||    
T  47773043 attaattatttccttaataactgtgcatcaaccttaaacgactattatttagagacggagggagta 47772978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 227 - 392
Target Start/End: Complemental strand, 49176058 - 49175892
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| ||||||| |||||| ||| ||||||| |||||||||||||||| |   | |||||||||||||||| |||||   |||||||||  ||||    
T  49176058 ccttatttattgaattttatccaacttaactactccgctaactacaattaataaggttattttagtaaatgatactaattttatcattgaaatctccaca 49175959  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 392  Q
    |||||| ||||| |||| |||| || ||||||||||||| |||||||||| | |||  |||||||||    
T  49175958 attaatcattttcttaaaaatcatgcacaaaccttaaacgactattattttgtgataaagggagtat 49175892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 227 - 391
Target Start/End: Complemental strand, 7061788 - 7061623
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||| ||| |||  || ||||||||||||||||||||     | | |||||||||||||| ||||| | |||||||||||||||    
T  7061788 ccttatttattgaatttcattcaacttaattaatccactaactacaattaataaagatattatagtaaatgatactaattttaccattgaaatcaacaca 7061689  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||||| ||||  |||| ||||||||||||||||||||| |||| ||||  ||||  |||||||||    
T  7061688 attaatcatttccttaataatcgtgtacaaaccttaaacgactaatattgtgagacagagggagta 7061623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 214 - 392
Target Start/End: Original strand, 34360638 - 34360818
Alignment:
Q  214 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| ||||||| ||||||| ||||||| || ||| ||| |||||||||||||||||||||||| | |   ||||||||||| |||| ||||| | |    
T  34360638 ttccactattatacccttatttattgaattttattcaacttaactactccactaactacaattaataagagtgttttagtaaatgctactaattttacca 34360737  T
Q  313 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 392  Q
    |||||||||| ||||||||| ||||  |||| ||||||| |||||| |||||| | || ||||  |||| |||||||||||    
T  34360738 ttgaaatcaatacaattaatcatttctttaataatcgtgcacaaactttaaacgattaatattgtgagacggagggagtat 34360818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 237 - 392
Target Start/End: Complemental strand, 52859913 - 52859757
Alignment:
Q  237 tgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-att 335  Q
    |||||||||| ||| ||| |||||||||||||||||||||||| |     |||||||||||||||| ||||| | ||  ||||||||||||||||| |||    
T  52859913 tgaatttcattcaacttaactactccactaactacaattaataaggatgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatt 52859814  T
Q  336 ttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 392  Q
    |  |||| ||||||| | || |||||| | ||||||||||||||| |||||||||||    
T  52859813 tccttaataatcgtgcataagccttaagcgactattatttagagacggagggagtat 52859757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 229 - 391
Target Start/End: Complemental strand, 11288751 - 11288589
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| ||||||| |||||| ||| ||||||||| |||||||||||||| |   | |||||||||||||| | ||||||| ||||||||||| |||||    
T  11288751 ttatttattgaattttatccaacttaactactccaccaactacaattaataagat-attttagtaaatgatattaattttgccattgaaatcaatacaat 11288653  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||| ||||| |||| ||||||  | ||||||||||| | ||| ||| ||||||||| ||||||    
T  11288652 taatcattttcttaataatcgtacataaaccttaaacgattataattcagagatggatggagta 11288589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 229 - 391
Target Start/End: Complemental strand, 5841550 - 5841386
Alignment:
Q  229 ttatttactgaatttcatccaatttag-ctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    ||||||| |||||||||||||| |||  |||||||||||||||||||||||| | | | |||||||||||||| | ||||| | ||| |||||||| |||    
T  5841550 ttatttattgaatttcatccaacttaaactactccactaactacaattaataagggtattttagtaaatgatattaattttaccattaaaatcaacgcaa 5841451  T
Q  328 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    | ||| ||||  |||| | | ||| ||||||||||||| ||||| ||||||||| |||| |||||    
T  5841450 tcaatcatttccttaatagttgtgcacaaaccttaaacgactataatttagagacggagagagta 5841386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 229 - 395
Target Start/End: Original strand, 2066788 - 2066955
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| ||||||||||| || ||| |||| |||||||||| |||||||| | |   |||| ||||| ||||| | ||| | ||  |||||||||||||    
T  2066788 ttatttattgaatttcatctaacttaactaccccactaactaaaattaataagggtgttttaataaataatactaactttaccatcaaaatcaacacaat 2066887  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtattat 395  Q
    |||| ||||  |||| ||||||| | ||||||||||| ||||||||||| ||||||| ||||||||||    
T  2066888 taatcatttccttaataatcgtgcataaaccttaaacgactattatttaaagatggatggagtattat 2066955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 229 - 391
Target Start/End: Original strand, 17114439 - 17114602
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| |||| ||| ||||| ||| |||||||||||||||||||||||| | |   |||||||||||||||| ||||| | ||  |||||||||||||    
T  17114439 ttatttattgaacttcctccaaattaactactccactaactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaat 17114538  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||| ||||  |||| ||  ||| |  |||||||||| ||||||||||| ||| ||||||||||    
T  17114539 taatcatttccttaataactgtgcatcaaccttaaacgactattatttaaagacggagggagta 17114602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 227 - 391
Target Start/End: Complemental strand, 16821455 - 16821290
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||| ||| |||  |||||||||||||| |||||||| |   | | |||||||||||||| |||||   |||||||||||||||    
T  16821455 ccttatttattgaatttcattcaacttaaatactccactaactataattaataaggatattatagtaaatgatactaattttatcattgaaatcaacaca 16821356  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||||| |||   |||| ||||||| ||||||||||||| |||| | ||  |||| ||||||||||    
T  16821355 attaatcattgcattaataatcgtgcacaaaccttaaacgactaattttgtgagacggagggagta 16821290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 214 - 392
Target Start/End: Complemental strand, 6643798 - 6643618
Alignment:
Q  214 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| ||||||| ||||||| |||||||||||||| ||| |||  |||||||||||||||||||       ||||||||||| |||| ||||| | |    
T  6643798 ttccactattatacccttatttattgaatttcatccaacttaactataccactaactacaattaataaagatgttttagtaaatgctactaattttacca 6643699  T
Q  313 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 392  Q
    |||||||||||||||||||| ||||  |||| |||||||  ||||| |||||| |||| ||||  |||| |||| ||||||    
T  6643698 ttgaaatcaacacaattaatcatttccttaataatcgtgctcaaacattaaactactaatattgtgagacggagtgagtat 6643618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 380
Target Start/End: Original strand, 51625140 - 51625234
Alignment:
Q  287 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 380  Q
    ||||||||||| |||| ||||| | ||||||||||||||||||||| ||||| |||| ||||||| |||||| |||||| ||||| |||||||||    
T  51625140 tttagtaaatgttactaattttaccattgaaatcaacacaattaatcattttcttaataatcgtgcacaaactttaaacgactataatttagaga 51625234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 228 - 391
Target Start/End: Original strand, 6609759 - 6609924
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    |||||||| ||| |||||||||| ||| |||||||| ||| |||||||||||       ||| |||||||||||| ||||| | ||  ||||||||||||    
T  6609759 cttatttattgagtttcatccaacttaactactccaataattacaattaataaagatgtttttgtaaatgatactaattttaccatcaaaatcaacacaa 6609858  T
Q  328 ttaat-attttgttaagaatcgtgtacaaaccttaaac-aactattatttagagatggagggagta 391  Q
    ||||| ||||  |||| ||||||| | |||| |||||| |||||||||||||||| ||||||||||    
T  6609859 ttaatcatttccttaataatcgtgcataaactttaaacgaactattatttagagacggagggagta 6609924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 228 - 357
Target Start/End: Complemental strand, 35380456 - 35380326
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaat-atgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    |||||||| |||||||||||||| ||| | ||||||||||||||||||||| |||  |  ||||||||||| |||| ||||| | ||| ||||||||| |    
T  35380456 cttatttattgaatttcatccaacttaaccactccactaactacaattaataatgatg-ttttagtaaatgctactaattttaccattaaaatcaacata 35380358  T
Q  327 attaat-attttgttaagaatcgtgtacaaac 357  Q
    |||||| ||||| |||| ||||||||| ||||    
T  35380357 attaatcattttcttaataatcgtgtataaac 35380326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 228 - 378
Target Start/End: Complemental strand, 42617026 - 42616875
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    |||||||| |||||||||| | | ||| |||||||||| |||||||||||||     | |||||||||||||| | ||||| | |||||||||||||||     
T  42617026 cttatttattgaatttcattcgacttaactactccacttactacaattaataaaaatattttagtaaatgatattaattttaccattgaaatcaacacag 42616927  T
Q  328 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttaga 378  Q
    ||||| ||||  |||| |||| || ||||| ||||||| ||||| |||||||    
T  42616926 ttaatcatttctttaataatcatgcacaaaacttaaacgactataatttaga 42616875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 262 - 362
Target Start/End: Complemental strand, 42517727 - 42517626
Alignment:
Q  262 cactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaacctt 360  Q
    ||||||||| |||||||| | | | |||||||||||||  | ||||| | ||||||||||||||||||||| ||||| |||| |||||||||||||| ||    
T  42517727 cactaactataattaataagggtattttagtaaatgatcttaattttaccattgaaatcaacacaattaatcattttcttaataatcgtgtacaaacatt 42517628  T
Q  361 aa 362  Q
    ||    
T  42517627 aa 42517626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 393
Target Start/End: Complemental strand, 44536310 - 44536153
Alignment:
Q  237 tgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-att 335  Q
    ||||||||||| || |||||||||||||||||||||||||||| | |   |||| |||||  | || ||||| | ||| ||||||||||||||||| |||    
T  44536310 tgaatttcatctaacttagctactccactaactacaattaataagggtgttttaataaatcctgctaattttaccattaaaatcaacacaattaatcatt 44536211  T
Q  336 ttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 393  Q
    |  |||| ||||||| | |||| |||||||| || ||||  |||| ||| ||||||||    
T  44536210 tccttaataatcgtgcataaactttaaacaattaatattgtgagagggaaggagtatt 44536153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 360
Target Start/End: Original strand, 49746958 - 49747091
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||||||| ||| |||||| |||||||| |||||||    | | ||||||||||  |||| |||||   |||||||||||||||    
T  49746958 ccttatttattgaatttcatccaacttaactactcaactaactataattaatgaaggtattttagtaaatactactaattttatcattgaaatcaacaca 49747057  T
Q  327 attaatattttgttaagaatcgtgtacaaacctt 360  Q
    ||||||  ||| |||| ||||||| |||| ||||    
T  49747058 attaattattttttaataatcgtgcacaagcctt 49747091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 229 - 364
Target Start/End: Complemental strand, 35311345 - 35311209
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| |||||||||||||| |||  ||||||||||||||||||||||| | |   | |||||||||  | | ||||| | |||||||| |||| |||    
T  35311345 ttatttattgaatttcatccaacttaattactccactaactacaattaataagagtgttctagtaaatgcaattaattttaccattgaaattaacataat 35311246  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaac 364  Q
    |||| ||||  |||| ||||||| |||||||||||||    
T  35311245 taatcatttccttaataatcgtgcacaaaccttaaac 35311209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 374
Target Start/End: Original strand, 39397341 - 39397489
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| | ||||||||||| |||| ||| || | ||||||||||||||||| ||| |||||||||||| | | | ||| | | ||||||||||| |    
T  39397341 ccttatttattaaatttcatccattttaactaatctagtaactacaattaatatggggattttagtaaatgacattaaatttaccaatgaaatcaacata 39397440  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 374  Q
    |||||| ||||  ||||  |||||| |||||| |||||| | |||||||    
T  39397441 attaatcatttccttaaacatcgtgcacaaactttaaacgattattatt 39397489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 228 - 391
Target Start/End: Original strand, 43237241 - 43237405
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    |||||||| |||||||||||||| ||| ||||| ||||||||| ||||||||       ||||||||||  |||| ||||| | |||||||| |||||||    
T  43237241 cttatttattgaatttcatccaacttaactacttcactaactataattaataatgattttttagtaaatattactaattttaccattgaaataaacacaa 43237340  T
Q  328 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    ||||| ||||  |||| ||||||| | ||||||||||| |||| ||||  |||| ||||| ||||    
T  43237341 ttaatcatttccttaataatcgtgcataaaccttaaacgactaatattgtgagacggaggcagta 43237405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 385
Target Start/End: Complemental strand, 28500979 - 28500856
Alignment:
Q  263 actaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaacctta 361  Q
    ||||||| ||||||||| | | | |||||||||||||| | ||||| | ||||||||||||||||| ||| ||||  |||| ||||||| |||||| |||    
T  28500979 actaactgcaattaataagggtattttagtaaatgatattaattttaccattgaaatcaacacaatcaatcatttccttaataatcgtgcacaaacatta 28500880  T
Q  362 aacaactattatttagagatggag 385  Q
    |||  |||| ||||||||| ||||    
T  28500879 aacggctataatttagagacggag 28500856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 375
Target Start/End: Original strand, 30192232 - 30192351
Alignment:
Q  257 tactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaa 355  Q
    ||||| ||||||||||||||||| |   | ||||| |||||| | | |||||   ||||||||||||||||||||| ||||| |||| ||||||||||||    
T  30192232 tactctactaactacaattaataagaatattttagcaaatgacattaattttataattgaaatcaacacaattaatcattttcttaaaaatcgtgtacaa 30192331  T
Q  356 accttaaacaactattattt 375  Q
    || ||||||| | |||||||    
T  30192332 acattaaacagcgattattt 30192351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 232 - 397
Target Start/End: Complemental strand, 2942763 - 2942598
Alignment:
Q  232 tttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaa 331  Q
    |||| |||| ||||| ||| ||| | |||||||||||||||||||||| |  |  ||||||||||| |||| |||||   || |||||||||||||||||    
T  2942763 tttattgaaattcattcaacttaaccactccactaactacaattaataaggtgt-tttagtaaatgctactaattttatcatcgaaatcaacacaattaa 2942665  T
Q  332 t-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtattatct 397  Q
    | ||||  |||| |||| | |||||||||||||| |||| ||||  |||| ||| | ||||||||||    
T  2942664 tcatttctttaataatcttatacaaaccttaaacgactaatattgtgagacggatgtagtattatct 2942598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 229 - 391
Target Start/End: Original strand, 22130042 - 22130209
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaac----a 324  Q
    ||||||| |||||||||||||| |||  ||||||||||||||||||||||| |     ||| |||||||||||| ||| | | ||||||||||||    |    
T  22130042 ttatttattgaatttcatccaacttaattactccactaactacaattaataaggatgtttttgtaaatgatactaattataccattgaaatcaacacata 22130141  T
Q  325 caattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||||||| ||||  |||| || |||| ||||||||||||| |||| ||||  |||| ||| ||||||    
T  22130142 caattaatcatttccttaataaccgtgcacaaaccttaaacgactaatattgtgagacggatggagta 22130209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 289 - 375
Target Start/End: Complemental strand, 27880303 - 27880217
Alignment:
Q  289 tagtaaatgatactcattttgctattgaaatcaacacaattaatattttgttaagaatcgtgtacaaaccttaaacaactattattt 375  Q
    |||||||||||||| ||||| | ||||||||||||||||| |  ||||  |||| |||| | |||||||||||||| ||||||||||    
T  27880303 tagtaaatgatactaattttaccattgaaatcaacacaataatcatttatttaaaaatcatatacaaaccttaaacgactattattt 27880217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 230 - 391
Target Start/End: Original strand, 53346759 - 53346921
Alignment:
Q  230 tatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaatt 329  Q
    |||||| ||||||||||| || ||| ||||||||||||||| |||||||| | |   ||||||||||| || | ||||| | |||||||  ||||||||     
T  53346759 tatttattgaatttcatcaaacttaactactccactaactaaaattaataagggtgttttagtaaatgctattaattttaccattgaaactaacacaatc 53346858  T
Q  330 aa-tattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    || |||||| |||| ||||||| |||||  |||||| |||| ||||   |||| |||||||||    
T  53346859 aattattttcttaataatcgtgcacaaattttaaacgactaatattgtaagatagagggagta 53346921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 332
Target Start/End: Complemental strand, 21240828 - 21240723
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||||||| ||| |||||| ||||||||||||||||| |      ||||||||||||||| ||||| | ||  |||||||||||    
T  21240828 ccttatttattgaatttcatccaacttaactactcaactaactacaattaataaggatgtgttagtaaatgatactaattttaccatcaaaatcaacaca 21240729  T
Q  327 attaat 332  Q
     |||||    
T  21240728 gttaat 21240723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 391
Target Start/End: Complemental strand, 38502605 - 38502441
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    |||||||| ||||||| |||||| ||| ||||| || |||||| ||||||||   | | |||| ||||||||||| ||||| | ||  ||||||||||||    
T  38502605 cttatttattgaattttatccaacttaactactacattaactataattaataaaagtattttaataaatgatactaattttaccatcaaaatcaacacaa 38502506  T
Q  328 ttaa-tattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||| |||||  |||| ||   || |  |||||||||| ||||||||||||||| |||| |||||    
T  38502505 ttaattatttccttaataactatgcatcaaccttaaacgactattatttagagacggagagagta 38502441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 374
Target Start/End: Complemental strand, 40122978 - 40122830
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||| || || ||| || |||||||||||||||| |||| | |   ||||||||||| |||| |||||   ||| |||||||| ||    
T  40122978 ccttatttattgaatttcgtcgaacttaactgctccactaactacaatcaataagggtgttttagtaaatgctactaattttaacattaaaatcaacgca 40122879  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 374  Q
    |||||| ||||  |||| ||||||| ||||| ||||||| |||| ||||    
T  40122878 attaatcatttccttaataatcgtgcacaaagcttaaacgactaatatt 40122830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 51624783 - 51624835
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 279  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||| |||||    
T  51624783 ccttatttattgaatttcatccaacttaactactccactaactacaaataata 51624835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 18741597 - 18741546
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaata 279  Q
    |||||||| |||||||||||||| ||| |||||||| |||||||||||||||    
T  18741597 cttatttattgaatttcatccaacttaactactccattaactacaattaata 18741546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 388
Target Start/End: Original strand, 461955 - 462117
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||  ||||||| || ||| ||| ||||||| |||| ||||||||||| |   | |||||||||| ||| |  |||| | ||||||||||| |||    
T  461955 ccttatttgttgaattttattcaacttaactactccgctaattacaattaataaggatattttagtaaataatattacttttaccattgaaatcaataca 462054  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggaggga 388  Q
    |||||| ||||| |||| |||  || ||||| ||||||  |||||||||| |||| |||||||    
T  462055 attaatcattttcttaaaaattatgcacaaatcttaaattactattatttcgagacggaggga 462117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 380
Target Start/End: Complemental strand, 8175644 - 8175550
Alignment:
Q  287 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 380  Q
    |||| ||||||||| | ||||| | ||||||||||||||||||| | ||||| |||| |||| || |||| || |||||||||||||||| ||||    
T  8175644 tttaataaatgatattaattttaccattgaaatcaacacaattattcatttttttaataatcatgcacaagccataaacaactattattttgaga 8175550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 370
Target Start/End: Complemental strand, 30682318 - 30682176
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| |||||||||| ||| ||| |||||| ||||||||||| ||||| |   | | |||||||||||| | ||||| | | | |||| ||||||||    
T  30682318 ttatttattgaatttcattcaaattaactactctactaactacaactaataaggatattatagtaaatgatattaattttaccaataaaattaacacaat 30682219  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactat 370  Q
    |||| ||||| |||| | ||||| | ||||||||||| |||||    
T  30682218 taatcatttttttaatagtcgtgcaaaaaccttaaacgactat 30682176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 329
Target Start/End: Complemental strand, 50264204 - 50264102
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||| ||| |||  || | |||||||||||||||||| | | | |||||||||||||  | |||||   |||||||||||||||    
T  50264204 ccttatttattgaatttcattcaacttaaatatttcactaactacaattaataagagtattttagtaaatgatgttaattttaacattgaaatcaacaca 50264105  T
Q  327 att 329  Q
    |||    
T  50264104 att 50264102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 364
Target Start/End: Complemental strand, 46396969 - 46396869
Alignment:
Q  265 taactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaa 363  Q
    ||||||||||||||| | |   ||||||||||| || | ||||| | ||||||||||||||||||||| ||||  ||||  |||||| ||||||||||||    
T  46396969 taactacaattaataagagtgttttagtaaatgctattaattttaccattgaaatcaacacaattaatcatttacttaatgatcgtgcacaaaccttaaa 46396870  T
Q  364 c 364  Q
    |    
T  46396869 c 46396869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 391
Target Start/End: Original strand, 4972595 - 4972722
Alignment:
Q  265 taactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaa 363  Q
    ||||||||||||||| | |   |||||||||||  ||  ||||| | ||||||||||||||||||||| ||||  |||| ||||||| ||||| ||||||    
T  4972595 taactacaattaataagagtgttttagtaaatgtcaccaatttttcaattgaaatcaacacaattaatcatttcattaataatcgtgcacaaatcttaaa 4972694  T
Q  364 caactattatttagagatggagggagta 391  Q
    | |||| ||||  |||| ||| ||||||    
T  4972695 cgactaatattgtgagacggatggagta 4972722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 239 - 376
Target Start/End: Original strand, 3689571 - 3689709
Alignment:
Q  239 aatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-atttt 337  Q
    ||||||||| || ||| | |||| |||||||| |||||||| | |   |||||||||||||||| ||||| | ||  ||||||| ||||||||| ||||     
T  3689571 aatttcatctaacttaacaactcaactaactataattaataagagtgttttagtaaatgatactaattttaccatcaaaatcaatacaattaatcatttc 3689670  T
Q  338 gttaagaatcgtgtacaaaccttaaacaactattattta 376  Q
     |||| || |||  | ||||||||||| |||||||||||    
T  3689671 tttaataaccgtacataaaccttaaacgactattattta 3689709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 333
Target Start/End: Complemental strand, 47359073 - 47358967
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||| ||| |||  ||||||||| |||||||||||||   | | ||||| |||| || || |||||   |||||||||||||||    
T  47359073 ccttatttattgaatttcattcaacttaattactccactgactacaattaataaaagtattttagaaaattattctaattttatcattgaaatcaacaca 47358974  T
Q  327 attaata 333  Q
    || ||||    
T  47358973 atcaata 47358967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 31370422 - 31370373
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaat 278  Q
    ||||||| ||| |||||||||| ||| ||||||||||||||| |||||||    
T  31370422 ttatttattgattttcatccaacttaactactccactaactataattaat 31370373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 32470012 - 32469907
Alignment:
Q  287 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggag 385  Q
    |||| ||||||||||| ||||| | ||| ||||||||||||||||| ||||| || | |||  || | ||| ||||||||| |||||||| |||||  ||    
T  32470012 tttaataaatgatactaattttaccattaaaatcaacacaattaatcattttctttaaaattatgcataaatcttaaacaaatattattttgagataaag 32469913  T
Q  386 ggagta 391  Q
    ||||||    
T  32469912 ggagta 32469907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 369
Target Start/End: Original strand, 52869107 - 52869212
Alignment:
Q  265 taactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaa-tattttgttaagaatcgtgtacaaaccttaaa 363  Q
    |||||||||||||||   | | |||| |||| |||| | || || |||||||||||||||||||||| |||||  |||| ||| ||| ||||||||||||    
T  52869107 taactacaattaataaaggtattttaataaacgatattaatcttactattgaaatcaacacaattaattatttccttaataattgtgcacaaaccttaaa 52869206  T
Q  364 caacta 369  Q
    | ||||    
T  52869207 cgacta 52869212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 19265805 - 19265857
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 279  Q
    ||||| ||| |||||||||| ||| ||| ||||||||||||||| ||||||||    
T  19265805 ccttaattattgaatttcattcaacttaactactccactaactataattaata 19265857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 375
Target Start/End: Complemental strand, 25141949 - 25141889
Alignment:
Q  316 aaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattattt 375  Q
    ||||||||||| ||||| ||||| |||| |||||| || ||||||||||| ||||||||||    
T  25141949 aaatcaacacatttaatcattttcttaaaaatcgtatataaaccttaaacgactattattt 25141889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 227 - 392
Target Start/End: Original strand, 1701 - 1867
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| ||||||| |||||| ||| |||||||||| ||||||||||||| | |   || ||||||||||||| ||||| | ||  ||||||||| |    
T  1701 ccttatttattgaatttaatccaacttaactactccactgactacaattaatacgggtgtttaagtaaatgatactaattttaccatcaaaatcaacata 1800  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 392  Q
    |||||| ||||| |||| || |||||| ||| ||||||| |||||||||||||||||||||||||||    
T  1801 attaatcattttcttaataaccgtgtataaatcttaaacgactattatttagagatggagggagtat 1867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 6e-29; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 227 - 391
Target Start/End: Complemental strand, 11656063 - 11655898
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||||||| ||  |||||||||||||||||||||||| | |   |||||||||||| ||| ||||| | ||  |||||||||||    
T  11656063 ccttatttattgaatttcatccaactttactactccactaactacaattaataagggtgttttagtaaatgacactaattttaccatcaaaatcaacaca 11655964  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||||| ||||| |||| || |||| | ||||||||||| ||| ||||||||||| ||||||||||    
T  11655963 attaatcattttcttaataaccgtgcataaaccttaaacgactcttatttagagacggagggagta 11655898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 228 - 393
Target Start/End: Original strand, 13087528 - 13087694
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    |||||||| |||||||||||||| |||  |||| ||||||||| |||||||| |     |||||||||||||| | ||||| | ||||||||||||||||    
T  13087528 cttatttattgaatttcatccaacttaattacttcactaactataattaataaggatgttttagtaaatgatattaattttaccattgaaatcaacacaa 13087627  T
Q  328 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 393  Q
    ||||| | ||| |||| |||||| ||  |||||||||| ||| ||||||||||| ||||||||||||    
T  13087628 ttaatcactttcttaataatcgtttatgaaccttaaacgacttttatttagagacggagggagtatt 13087694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 228 - 393
Target Start/End: Original strand, 29363304 - 29363470
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    |||||||| |||||||||||||| ||| ||| ||| |||||||||||||||| |     ||||||||||||||||  |||| | ||  ||||||||||||    
T  29363304 cttatttattgaatttcatccaacttaactaatccgctaactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaatcaacacaa 29363403  T
Q  328 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 393  Q
    ||||| ||||| |||| ||| ||| | ||||||||||| ||||||||||| ||| ||||||||||||    
T  29363404 ttaatcattttcttaataattgtgcataaaccttaaacgactattatttaaagacggagggagtatt 29363470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 227 - 374
Target Start/End: Original strand, 181553 - 181700
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaata-tgtggactttagtaaatgatactcattttgctattgaaatcaacac 325  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||| |||||||| ||  |  ||||||||||  |||| ||||| ||||||||||||| ||    
T  181553 ccttatttattgaatttcatccaacttaactactccactaactataattaataatgatgt-tttagtaaatactactaattttactattgaaatcaatac 181651  T
Q  326 aattaatattttgttaagaatcgtgtacaaaccttaaacaactattatt 374  Q
    |||||||||||| |||| |||||||  ||||||||| || |||| ||||    
T  181652 aattaatatttttttaataatcgtgctcaaaccttagacgactaatatt 181700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 222 - 391
Target Start/End: Original strand, 23142659 - 23142829
Alignment:
Q  222 ttataccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatca 321  Q
    ||||||||| |||| ||||||||||| |  ||| ||||||||||| |||||||||||| | |   |||||||||||  |||  |||| | ||||||||||    
T  23142659 ttataccttctttattgaatttcatctagcttaactactccactacctacaattaataagggtgttttagtaaatgccactatttttaccattgaaatca 23142758  T
Q  322 acacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    ||||||||||| ||||| |||| ||||||| | |||||||||| ||||| ||||  |||| ||||||||||    
T  23142759 acacaattaatcattttcttaataatcgtggataaaccttaaataactaatattgtgagacggagggagta 23142829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 6801928 - 6802093
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    |||||||||  ||| ||||||||| ||| |||||||||||||||||||||||| | |   |||||||||||||| | ||||| | ||  ||||||||| |    
T  6801928 ccttatttatcgaacttcatccaacttaactactccactaactacaattaataagggcgttttagtaaatgatattaattttaccatcaaaatcaacata 6802027  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||||| ||||| |||| || | || |  || ||||||| ||||||||||||||||||||||||||    
T  6802028 attaatcattttcttaataaccatgcatcaatcttaaacgactattatttagagatggagggagta 6802093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 15058114 - 15058279
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||||||| |||  |||| |||||||||||||||||| | | | |||||||||||  ||| ||||| | |||||||| |||  |    
T  15058114 ccttatttattgaatttcatccaacttaaatacttcactaactacaattaataagggtattttagtaaatgccactaattttaccattgaaattaactta 15058213  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||||| ||||| |||| ||||||| ||||||||||||| |||| ||||  ||||  |||||||||    
T  15058214 attaatcattttcttaataatcgtgcacaaaccttaaacgactaatattgcgagacagagggagta 15058279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 222 - 380
Target Start/End: Complemental strand, 1956101 - 1955942
Alignment:
Q  222 ttataccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatca 321  Q
    |||||||||||||| ||||||| ||| ||   ||||||| |||||||||||||||||| | | |  ||||||||||||||| ||||| | ||||||||||    
T  1956101 ttataccttatttattgaattttatcgaacacagctacttcactaactacaattaataagagtatattagtaaatgatactaattttaccattgaaatca 1956002  T
Q  322 acacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 380  Q
    | |||||||||  |||| ||||  |  ||||| ||||||||||| |||||||||| ||||    
T  1956001 atacaattaatctttttcttaattactgtgtataaaccttaaacgactattattttgaga 1955942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 215 - 380
Target Start/End: Complemental strand, 3291898 - 3291731
Alignment:
Q  215 tccactgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctat 313  Q
    |||| |||||||| |||||||| ||||||| |||||| ||| ||||| ||||||||||||||||||   | | |||||||||| ||||| || || | ||    
T  3291898 tccattgttatacacttatttattgaattttatccaacttaactacttcactaactacaattaataaaggtattttagtaaataatactaatattaccat 3291799  T
Q  314 tgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 380  Q
    | ||||| | ||||||||| ||||  |||| ||||||| | ||||||||||| |||||||||||||||    
T  3291798 taaaatcgatacaattaatcatttccttaataatcgtgcaaaaaccttaaacgactattatttagaga 3291731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 229 - 392
Target Start/End: Original strand, 21010172 - 21010340
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaa----ctacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaaca 324  Q
    ||||||| |||||||||||||| ||| ||||||||||||    |||||||| ||| | |   |||||||||||||||| ||||| | ||  |||| ||||    
T  21010172 ttatttattgaatttcatccaacttaactactccactaattaactacaatttataagggtgttttagtaaatgatactaatttttccatcaaaattaaca 21010271  T
Q  325 caattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 392  Q
    |||||||| ||||| |||| ||| ||| | ||||||||||||||||||||||||| | ||||| |||||    
T  21010272 caattaatcattttcttaataattgtgcataaaccttaaacaactattatttagaaacggaggaagtat 21010340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 364
Target Start/End: Original strand, 1781789 - 1781937
Alignment:
Q  216 ccactgttataccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattg 315  Q
    ||||| ||||||||| |||| |||||||||| ||| ||| | |||||||||||||||||||||| | |   ||||||||||| |||| ||||| | ||||    
T  1781789 ccactattataccttttttattgaatttcattcaacttaac-actccactaactacaattaataagggtgttttagtaaatgctactaattttaccattg 1781887  T
Q  316 aaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaac 364  Q
    | ||||||| ||||||| ||||| |||| ||||||| | |||||||||||    
T  1781888 agatcaacataattaatcattttcttaacaatcgtgcataaaccttaaac 1781937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 393
Target Start/End: Complemental strand, 6834484 - 6834319
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| ||||| |||| ||||||| ||| || |||||||| ||||||||   |   |||||||||||||| | ||||  ||||  |||||||||||||    
T  6834484 ttatttattgaatctcattcaatttatctattctactaactataattaataaaggtgttttagtaaatgatattaatttgactatcaaaatcaacacaat 6834385  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 393  Q
    |||| ||||| |||| ||||||| | |||| ||||| |||||||||||||| | ||||||||||||    
T  6834384 taattattttcttaataatcgtgcataaactttaaagaactattatttagaaacggagggagtatt 6834319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 216 - 374
Target Start/End: Complemental strand, 3720370 - 3720210
Alignment:
Q  216 ccactgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctatt 314  Q
    ||||| |||||| ||||||||||||||||||| ||| ||| ||| |||||||||||||||||||| | |   ||| ||||||  |||  |||||   |||    
T  3720370 ccactattatactcttatttactgaatttcattcaacttaactattccactaactacaattaataagagtgtttttgtaaatactacaaattttataatt 3720271  T
Q  315 gaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 374  Q
    |||||||||||||||||| ||||  |||| ||||||| ||||||||||||| |||| ||||    
T  3720270 gaaatcaacacaattaatcatttcattaataatcgtgcacaaaccttaaacgactaatatt 3720210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 227 - 392
Target Start/End: Complemental strand, 31894327 - 31894161
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaata-tgtggactttagtaaatgatactcattttgctattgaaatcaacac 325  Q
    ||||||||| | |||||||||||| ||| ||||| |||||||||||||||||| ||  |  ||||||||||| |||| ||||| | ||||||||||||||    
T  31894327 ccttatttattaaatttcatccaacttaactacttcactaactacaattaataatgacgt-tttagtaaatgctactaattttaccattgaaatcaacac 31894229  T
Q  326 aattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 392  Q
    ||||||| ||||| |||| |||| |  ||||| ||||||| | || ||||  |||| |||||||||||    
T  31894228 aattaatcattttcttaataatcatacacaaatcttaaacgattaatattgtgagacggagggagtat 31894161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 348
Target Start/End: Complemental strand, 24983566 - 24983444
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| ||||||||| |||| ||| |||||||||||||||||||||||| | |   |||||||||||| ||| ||||| | |||||||||||| ||    
T  24983566 ccttatttattgaatttcacccaacttaactactccactaactacaattaataagggtgttttagtaaatgacactaattttaccattgaaatcaactca 24983467  T
Q  327 attaat-attttgttaagaatcg 348  Q
    | |||| ||||  ||||||||||    
T  24983466 actaatcatttccttaagaatcg 24983444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 240 - 392
Target Start/End: Complemental strand, 32440749 - 32440596
Alignment:
Q  240 atttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttg 338  Q
    ||||||||||| ||| |||||| ||||| ||||||||||| | |   |||||||||| ||||| ||||| | ||  ||||||||||||||||| ||||      
T  32440749 atttcatccaacttaactactctactaattacaattaataagggtgttttagtaaataatactaattttaccatcaaaatcaacacaattaatcatttcc 32440650  T
Q  339 ttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 392  Q
    | || || |||| | ||| ||||||| ||||||||||||||| |||||||||||    
T  32440649 taaataaccgtgcataaatcttaaacgactattatttagagacggagggagtat 32440596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 363
Target Start/End: Original strand, 13909422 - 13909558
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    |||||||| | ||||||||| || |||  ||||||||||||||||||||||| | | | |||||||||||  ||| ||||| | |||||||||||||||     
T  13909422 cttatttattcaatttcatctaacttaattactccactaactacaattaataagggtattttagtaaatgtcactaattttaccattgaaatcaacacat 13909521  T
Q  328 ttaat-attttgttaagaatcgtgtacaaaccttaaa 363  Q
    ||||| ||||  |||| ||||||| |||||| |||||    
T  13909522 ttaatcatttccttaataatcgtgcacaaactttaaa 13909558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 227 - 392
Target Start/End: Original strand, 15582280 - 15582446
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| ||||||||||  || ||| | ||| ||||||||||||  | ||  || | |||| ||||||||||| ||||| | |||||||||||||||    
T  15582280 ccttatttattgaatttcattaaacttaaccacttcactaactacaacaagtaaatgtattttaataaatgatactgattttaccattgaaatcaacaca 15582379  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 392  Q
    |||||| |||   ||||  || || |||||| ||||||| ||||||||||  ||||||||| |||||    
T  15582380 attaatcattcatttaaatattgtctacaaatcttaaacgactattattttaagatggaggaagtat 15582446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 229 - 279
Target Start/End: Complemental strand, 34657677 - 34657627
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaata 279  Q
    ||||||| |||||||||||||| ||| ||||||||||||||||||||||||    
T  34657677 ttatttattgaatttcatccaacttaactactccactaactacaattaata 34657627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 239 - 332
Target Start/End: Complemental strand, 1063708 - 1063615
Alignment:
Q  239 aatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat 332  Q
    ||||||||  || ||| ||||||||||||||||||||| |  | | | |||||||||| ||||| |||||   |||||||||||||||||||||    
T  1063708 aatttcatttaacttaactactccactaactacaattactcagagtattttagtaaataatactaattttatcattgaaatcaacacaattaat 1063615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 227 - 308
Target Start/End: Complemental strand, 11143704 - 11143623
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcatttt 308  Q
    ||||||||| |||| ||||||||| ||| ||||| ||||||||| |||||||| | |   |||||||||||||||| |||||    
T  11143704 ccttatttattgaacttcatccaacttaactacttcactaactataattaataagggtgatttagtaaatgatactaatttt 11143623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 308
Target Start/End: Original strand, 30716898 - 30716978
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcatttt 308  Q
    |||||||| ||||||| |||||| ||  |||||||||||||||||||||||| | |   || ||||||||||||| |||||    
T  30716898 cttatttattgaattttatccaactttactactccactaactacaattaataagggtgtttaagtaaatgatactaatttt 30716978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 278
Target Start/End: Original strand, 15046121 - 15046171
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaat 278  Q
    ||||||||| |||||||||||||| | | |||||||||||||||||||||||    
T  15046121 ccttatttattgaatttcatccaactaa-ctactccactaactacaattaat 15046171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 332
Target Start/End: Original strand, 1225045 - 1225149
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| | ||||| |||||| ||| || || ||||||||| |||||||| |   | |||||||||| ||| | ||||| ||||| |||||||||||    
T  1225045 ccttatttattcaattt-atccaacttaacttcttcactaactaaaattaataagaatattttagtaaataatattaattttactatttaaatcaacaca 1225143  T
Q  327 attaat 332  Q
    ||||||    
T  1225144 attaat 1225149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 332
Target Start/End: Complemental strand, 4590655 - 4590610
Alignment:
Q  287 tttagtaaatgatactcattttgctattgaaatcaacacaattaat 332  Q
    ||||||||| |||| | ||||| |||||||||||||||||||||||    
T  4590655 tttagtaaacgatattaattttactattgaaatcaacacaattaat 4590610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 5302351 - 5302400
Alignment:
Q  230 tatttactgaatttcatccaatttagctactccactaactacaattaata 279  Q
    |||||| |||| ||||||||| ||| |||||||| |||||||||||||||    
T  5302351 tatttattgaacttcatccaacttaactactccattaactacaattaata 5302400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 13206949 - 13206897
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 279  Q
    ||||||||| |||||| ||  ||||||| | ||||||||||||||||||||||    
T  13206949 ccttatttattgaattacactcaatttaacaactccactaactacaattaata 13206897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 229 - 391
Target Start/End: Original strand, 5389 - 5552
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| |||||||||||||| ||| ||||||||||||||| |||||||| |   | |||||||||||||| | ||||| | |||||| |||||||| |    
T  5389 ttatttattgaatttcatccaacttaactactccactaactaaaattaataaggatattttagtaaatgatattaattttaccattgaattcaacacagt 5488  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||| ||||| |||| |||| |||||||||||||||| | ||| ||||||||||| | ||||||    
T  5489 taatcattttcttaataatcatgtacaaaccttaaacgattataatttagagatgaatggagta 5552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 4e-27; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 227 - 380
Target Start/End: Original strand, 39691487 - 39691641
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||| ||| ||  |||||||||||||| ||||||||| | | | |||||||||||||| | |||||   |||||||||||||||    
T  39691487 ccttatttattgaatttcattcaactttactactccactaactgcaattaataagagtattttagtaaatgatattaattttatcattgaaatcaacaca 39691586  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 380  Q
    |||||| ||||| |||| ||||||| ||||||||||||| | ||| |||||||||    
T  39691587 attaatcattttcttaataatcgtgcacaaaccttaaacgattataatttagaga 39691641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 227 - 386
Target Start/End: Original strand, 45235578 - 45235738
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| ||||||||||| || ||| ||| | || ||||||||||||||| | |   |||||||||||||| | ||||| | |||||||||||||||    
T  45235578 ccttatttattgaatttcatcaaacttaactatttcattaactacaattaataagggtgttttagtaaatgatattaattttaccattgaaatcaacaca 45235677  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagg 386  Q
    || ||| ||||  |||| ||||||| ||||||||||||| ||||||||||||||| |||||    
T  45235678 atcaatcatttccttaataatcgtgcacaaaccttaaacgactattatttagagacggagg 45235738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 229 - 395
Target Start/End: Original strand, 16463688 - 16463855
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| | ||||||||| || ||  |||||||||||||||||||||||| | |   |||||||||||||||| ||||| | ||  |||||||||||||    
T  16463688 ttatttattaaatttcatcaaactttactactccactaactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaat 16463787  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtattat 395  Q
    |||| ||||  |||| || |||| | ||||||||||| ||||||||||||||| || |||||||||||    
T  16463788 taatcatttccttaataaccgtgcataaaccttaaacgactattatttagagacggggggagtattat 16463855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 227 - 380
Target Start/End: Original strand, 37322425 - 37322580
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| ||||||||||| || ||| |||||||||||||||||||||||| | | | |||| ||||||||| | ||||| | |||||||||||||||    
T  37322425 ccttatttattgaatttcatctaacttaactactccactaactacaattaataagggtattttaataaatgatattaattttaccattgaaatcaacaca 37322524  T
Q  327 attaat-atttt-gttaagaatcgtgtacaaaccttaaacaactattatttagaga 380  Q
    || ||| |||||  |||| ||||||| | ||||||||||| ||||| |||||||||    
T  37322525 atcaatcattttccttaataatcgtgcataaaccttaaacgactataatttagaga 37322580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 222 - 371
Target Start/End: Original strand, 16805873 - 16806023
Alignment:
Q  222 ttataccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatca 321  Q
    |||| |||||| || | ||||| |||||| ||| | |||||||||||||||||||||| |   | |||||||||||||||| ||||| ||||| ||||||    
T  16805873 ttatcccttatctattaaatttaatccaacttaacaactccactaactacaattaataaggatattttagtaaatgatactaattttactattaaaatca 16805972  T
Q  322 acacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactatt 371  Q
    ||||||||||| ||||  |||| ||||||| ||||||||||||| ||||||    
T  16805973 acacaattaatcatttctttaataatcgtgcacaaaccttaaactactatt 16806023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 222 - 371
Target Start/End: Original strand, 16845154 - 16845304
Alignment:
Q  222 ttataccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatca 321  Q
    |||| |||||| || | ||||| |||||| ||| | |||||||||||||||||||||| |   | |||||||||||||||| ||||| ||||| ||||||    
T  16845154 ttatcccttatctattaaatttaatccaacttaacaactccactaactacaattaataaggatattttagtaaatgatactaattttactattaaaatca 16845253  T
Q  322 acacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactatt 371  Q
    ||||||||||| ||||  |||| ||||||| ||||||||||||| ||||||    
T  16845254 acacaattaatcatttctttaataatcgtgcacaaaccttaaactactatt 16845304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 25637478 - 25637642
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| | |||||||||||| ||| |||||||  |||||||||||||||   |   |||||||||||| ||| ||||| | ||  |||||||||||    
T  25637478 ccttatttattaaatttcatccaacttaactactcctataactacaattaataaaggtgttttagtaaatgacactaattttaccatcaaaatcaacaca 25637577  T
Q  327 attaatattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    ||||||  |||  | | ||||||| | ||||||||||||||||||||||||||| ||| ||||||    
T  25637578 attaatcatttccttataatcgtgcataaaccttaaacaactattatttagagacggatggagta 25637642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 214 - 363
Target Start/End: Complemental strand, 5789778 - 5789627
Alignment:
Q  214 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| ||||||| ||||||| |||||||||||||| ||| ||| | |||||||||||||||||| | |   |||||||||||  ||| ||||| |||    
T  5789778 ttccactattataccattatttattgaatttcatccaacttaactatttcactaactacaattaataagggtgttttagtaaatgccactaattttacta 5789679  T
Q  313 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaa 363  Q
    ||||| |||| ||||||||| ||||  |||| ||||||| ||||||||||||    
T  5789678 ttgaattcaatacaattaatcatttccttaataatcgtgcacaaaccttaaa 5789627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 214 - 391
Target Start/End: Original strand, 17695313 - 17695492
Alignment:
Q  214 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| ||||||| ||||||| |||||||||||||| ||| |||||| |||||||| |||||||| |   | ||| ||||||||||   ||||| | |    
T  17695313 ttccactattatacccttatttattgaatttcatccaacttaactactctactaactataattaataagaatatttttgtaaatgatatcaattttacca 17695412  T
Q  313 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||||||||| ||||||||| ||||  |||| ||||||| ||||||||||||| | ||| |||| |||| ||| ||||||    
T  17695413 ttgaaatcaatacaattaatcatttccttaataatcgtgcacaaaccttaaacgattataattttgagacggatggagta 17695492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 227 - 392
Target Start/End: Original strand, 39785582 - 39785751
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgata---ctcattttgctattgaaatcaac 323  Q
    ||||||||| |||| ||||||||| ||| |||||||| ||||||||||||||| | |   ||||||||||||||   || ||||| | ||  ||||||||    
T  39785582 ccttatttattgaacttcatccaacttaactactccattaactacaattaataagagtgttttagtaaatgatagtactaattttaccatcaaaatcaac 39785681  T
Q  324 acaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 392  Q
    ||||||||| ||||  |||| || |||| |  |||||||||| ||||||||||||||| |||||||||||    
T  39785682 acaattaatcatttccttaataaccgtgcatcaaccttaaacgactattatttagagacggagggagtat 39785751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 227 - 395
Target Start/End: Original strand, 36794281 - 36794450
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||| ||||||||| ||| ||||||||||||||||| |||||| | |   ||||||||| |||||| ||||| | ||  |||||||||||    
T  36794281 ccttatttattgaacttcatccaacttaactactccactaactacagttaataagggcgttttagtaaaagatactaattttaccatcaaaatcaacaca 36794380  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtattat 395  Q
    |||||| ||||  |||| || | || |  || ||||||| ||||||||||||||| |||| |||||||||    
T  36794381 attaatcatttccttaataaccatgcatcaatcttaaacgactattatttagagacggagagagtattat 36794450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 227 - 394
Target Start/End: Complemental strand, 14523488 - 14523320
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||| | ||||||||||| || ||| |||||||||||||||||||||||| |   | |||||||||||||| | ||||| | |||||||||||||||    
T  14523488 ccttattaattgaatttcatctaacttaactactccactaactacaattaataaggatattttagtaaatgatattaattttaccattgaaatcaacaca 14523389  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatta 394  Q
    |  ||| ||||  |||| || | || | |||| |||||| |||||| |||||||| ||||||| |||||    
T  14523388 aaaaatcatttccttaataaccttgcataaactttaaacgactattttttagagacggagggattatta 14523320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 227 - 393
Target Start/End: Complemental strand, 15359203 - 15359036
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||| ||||||||| ||| |||||||||||||||||||||||| | |   |||||||||||||| | |||||   ||  |||||||||||    
T  15359203 ccttatttattgaacttcatccaacttaactactccactaactacaattaataagggtgttttagtaaatgatattaattttatcatcaaaatcaacaca 15359104  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 393  Q
    |||||| || || |||| || |||| |  |||||||||| ||||||||||| ||| ||| | ||||||    
T  15359103 attaatcatcttcttaataaccgtgcatcaaccttaaacgactattatttaaagacggaagaagtatt 15359036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 214 - 332
Target Start/End: Original strand, 35313870 - 35313989
Alignment:
Q  214 ttccactgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| |||||| |||||||| ||||||||||| || ||| |||||||||||||||||||||||| |    ||||| |||||  |||| ||||| | |    
T  35313870 ttccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataaggttgctttaataaatactactaattttacca 35313969  T
Q  313 ttgaaatcaacacaattaat 332  Q
    ||||||||||||||||||||    
T  35313970 ttgaaatcaacacaattaat 35313989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 312 - 393
Target Start/End: Complemental strand, 26607999 - 26607917
Alignment:
Q  312 attgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 393  Q
    ||||||||||||||||||||| ||||| |||| ||||||| ||||||||||||| | ||| ||||||||| ||||||||||||    
T  26607999 attgaaatcaacacaattaatcattttcttaataatcgtgcacaaaccttaaactattataatttagagaaggagggagtatt 26607917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 231 - 380
Target Start/End: Original strand, 43410427 - 43410577
Alignment:
Q  231 atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaatta 330  Q
    ||||| |||||||||| ||| ||| |||||||| ||||||||||||||| |   | |||||||||||||| | |||||   ||||| |||||||||||||    
T  43410427 atttattgaatttcattcaacttaactactccattaactacaattaataaggatattttagtaaatgatattaattttatcattgatatcaacacaatta 43410526  T
Q  331 at-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 380  Q
    || ||||  |||| ||||||| |||||| |||||  ||||| |||||||||    
T  43410527 ataatttccttaataatcgtgcacaaacattaaaggactataatttagaga 43410577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 229 - 392
Target Start/End: Complemental strand, 36354557 - 36354393
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| |||||||||||||| ||| |||||||||||||||||||||||| | |   || | ||||| ||||| ||||| | ||  ||||||||||||     
T  36354557 ttatttattgaatttcatccaacttaactactccactaactacaattaataagagtgtttcaataaataatactaattttaccatcaaaatcaacacaac 36354458  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 392  Q
    || | ||||  |||| ||||||  | ||||||||||  ||||||||||||||| ||| |||||||    
T  36354457 tagtcatttccttaataatcgtacataaaccttaaatgactattatttagagacggatggagtat 36354393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 237 - 371
Target Start/End: Complemental strand, 43115908 - 43115773
Alignment:
Q  237 tgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-att 335  Q
    |||||||||| ||| ||| ||||||||||||||||||| |||| | | | ||||||||||| |||| | |||   ||||||||||||||||||||| |||    
T  43115908 tgaatttcattcaacttaactactccactaactacaataaataagagtattttagtaaatgctactaactttatcattgaaatcaacacaattaatcatt 43115809  T
Q  336 ttgttaagaatcgtgtacaaaccttaaacaactatt 371  Q
    |  |||| ||||| | |||||| |||||| ||||||    
T  43115808 tctttaataatcgcgcacaaactttaaacgactatt 43115773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 332
Target Start/End: Complemental strand, 8947168 - 8947063
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||| |||||||| |     ||||||||||  |||| |||||   |||||||||||||||    
T  8947168 ccttatttattgaatttcatccaacttaactactccactaactataattaataaggatgttttagtaaatattactaattttatcattgaaatcaacaca 8947069  T
Q  327 attaat 332  Q
    ||||||    
T  8947068 attaat 8947063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 375
Target Start/End: Original strand, 19937734 - 19937823
Alignment:
Q  287 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattattt 375  Q
    |||||||||||||| | ||||| | ||||||||||||||||||||| ||||  |||| ||||||| ||||||||||||| ||||| ||||    
T  19937734 tttagtaaatgatattaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgactataattt 19937823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 229 - 349
Target Start/End: Complemental strand, 17346476 - 17346356
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||||||     | |||| ||||||||| | ||||| || |||||||||| | |||    
T  17346476 ttatttattgaatttcttccaacttaactactccactaactacaattaataaaaatattttaataaatgatattaattttacttttgaaatcaaaataat 17346377  T
Q  329 taatattttgttaagaatcgt 349  Q
    ||||||||  |||| ||||||    
T  17346376 taatatttctttaataatcgt 17346356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 370
Target Start/End: Complemental strand, 31448809 - 31448665
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||||||| ||| ||| | |||||||| |||||| || | |   ||||||||||||  || ||||| | ||  |||||||||||    
T  31448809 ccttatttattgaatttcatccaacttaactatttcactaactgcaattagtaagggtgttttagtaaatgactctaattttaccatcaaaatcaacaca 31448710  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactat 370  Q
    |||||| ||||  |||| ||||||| ||||||||||||| |||||    
T  31448709 attaatcatttccttaataatcgtgcacaaaccttaaacgactat 31448665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 228 - 386
Target Start/End: Complemental strand, 34120552 - 34120395
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    |||| ||| |||||||||||||| ||| ||| ||||||||||||||||||||  |  | |||||||||| |||||  |||| | ||  ||||||||||||    
T  34120552 cttacttattgaatttcatccaacttaactattccactaactacaattaataaat--attttagtaaataatactagttttaccatcaaaatcaacacaa 34120455  T
Q  328 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagg 386  Q
    ||||| ||||| |||| |||| || | |||| ||||||   ||||||||||||| |||||    
T  34120454 ttaatcattttcttaataatcatgcataaactttaaacggttattatttagagacggagg 34120395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 278
Target Start/End: Complemental strand, 5272255 - 5272204
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaat 278  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  5272255 ccttatttattgaatttcatccaatttaattactccactaactacaattaat 5272204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 364
Target Start/End: Complemental strand, 16377774 - 16377634
Alignment:
Q  229 ttatttactgaatttcatccaatttag----ctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaaca 324  Q
    ||||||| |||||||||||||| |||     |||||||||||||||||||||||| |   | ||| |||||||||| | ||||| | |||| ||||||||    
T  16377774 ttatttattgaatttcatccaacttaattaactactccactaactacaattaataaggttattttggtaaatgatattaattttaccattgtaatcaaca 16377675  T
Q  325 caattaat-attttgttaagaatcgtgtacaaaccttaaac 364  Q
    |||||||| ||||  |||| ||||||| ||||| |||||||    
T  16377674 caattaatcatttctttaataatcgtgcacaaatcttaaac 16377634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 229 - 331
Target Start/End: Complemental strand, 35242411 - 35242309
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| |||||||||||||| ||| |||||| |||||||||||||||||  |  | | ||||||||||| || |||||   ||| |||||||||||||    
T  35242411 ttatttattgaatttcatccaacttaactactcaactaactacaattaataaatatattctagtaaatgattctaattttaacattaaaatcaacacaat 35242312  T
Q  329 taa 331  Q
    |||    
T  35242311 taa 35242309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 374
Target Start/End: Complemental strand, 3323387 - 3323254
Alignment:
Q  228 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 327  Q
    |||| ||| |||||||||||||| ||| ||||||||||||||||||||||||              |||| |||| ||||| | ||||||||||||||||    
T  3323387 cttacttattgaatttcatccaacttaactactccactaactacaattaata--------------aatgttactaattttaccattgaaatcaacacaa 3323302  T
Q  328 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 374  Q
    ||||| |||||  ||| ||||||| ||||||||||||| |||| ||||    
T  3323301 ttaatcatttttataataatcgtgcacaaaccttaaacgactaatatt 3323254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 227 - 332
Target Start/End: Complemental strand, 43699712 - 43699610
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    |||| |||| ||||||| |||||| |||  |||||||||||    |||||||| ||| | |||| ||||||||||| ||||| |||||||||||||||||    
T  43699712 ccttgtttattgaattttatccaacttaattactccactaaa---aattaataggtgtattttaataaatgatactaattttactattgaaatcaacaca 43699616  T
Q  327 attaat 332  Q
     |||||    
T  43699615 gttaat 43699610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 279
Target Start/End: Complemental strand, 26863472 - 26863422
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaata 279  Q
    ||||||| |||||||||||| | ||| ||||||||||||||||||||||||    
T  26863472 ttatttaatgaatttcatccgacttaactactccactaactacaattaata 26863422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 279
Target Start/End: Complemental strand, 39329777 - 39329728
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaata 279  Q
    ||||||| |||||||||||||||||| |||||||| |||||||||||||||    
T  39329777 ttatttattgaatttcatccaatttaactactcca-taactacaattaata 39329728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 9458382 - 9458330
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 279  Q
    ||||||||| | |||||||||||| ||  ||||||||||||||||||||||||    
T  9458382 ccttatttattaaatttcatccaactttactactccactaactacaattaata 9458330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 375
Target Start/End: Complemental strand, 18853317 - 18853167
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcatt--ttgctattgaaatcaaca 324  Q
    ||||||||| |||||||||||||| |||  ||||| ||||||||||| ||||| | | | ||| |||||||||||  |||  ||   |||||||||||||    
T  18853317 ccttatttattgaatttcatccaaattaattactctactaactacaactaataagagtattttggtaaatgatac-aattaattatcattgaaatcaaca 18853219  T
Q  325 caattaa-tattttgttaagaatcgtgtacaaaccttaaacaactattattt 375  Q
    ||||||| |||||  ||||  |||||| |||||  |||||| ||||||||||    
T  18853218 caattaattatttccttaaagatcgtgcacaaattttaaacgactattattt 18853167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 393
Target Start/End: Complemental strand, 5272181 - 5272142
Alignment:
Q  354 aaaccttaaacaactattatttagagatggagggagtatt 393  Q
    ||||||||||| ||||||||||||||||| ||||||||||    
T  5272181 aaaccttaaacgactattatttagagatgaagggagtatt 5272142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 391
Target Start/End: Original strand, 30544402 - 30544445
Alignment:
Q  348 gtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    ||||| ||||||||||| ||||||||||||||| ||||||||||    
T  30544402 gtgtaaaaaccttaaacgactattatttagagacggagggagta 30544445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 393
Target Start/End: Original strand, 32783421 - 32783527
Alignment:
Q  287 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggag 385  Q
    |||||||||||||| | ||||| ||||  |||| |||||||||||| ||||| |||| || |||| |  |||||||||  | |||||||||||||||| |    
T  32783421 tttagtaaatgatattaattttactatcaaaataaacacaattaatcattttcttaataaccgtgcatcaaccttaaatgattattatttagagatgg-g 32783519  T
Q  386 ggagtatt 393  Q
    ||||||||    
T  32783520 ggagtatt 32783527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 34225587 - 34225726
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| | |||||||| ||| |||  ||||||| ||||||||||||||| | |   |||||||||| ||||| | ||| | ||| ||||||| | |    
T  34225587 ccttatttattaaatttcattcaacttaaatactccattaactacaattaataagggtgttttagtaaataatactaagtttaccattaaaatcaatata 34225686  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaaca 365  Q
    |||| | ||||  |||| ||||||| ||||||||||||||    
T  34225687 attattcatttccttaataatcgtgcacaaaccttaaaca 34225726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 229 - 279
Target Start/End: Original strand, 19937384 - 19937434
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaata 279  Q
    ||||||| ||||||| || ||| ||| ||||||||||||||||||||||||    
T  19937384 ttatttattgaattttattcaacttaactactccactaactacaattaata 19937434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 229 - 279
Target Start/End: Complemental strand, 32831289 - 32831239
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaata 279  Q
    ||||||| |||||||||||  ||||| |||||||| |||||||||||||||    
T  32831289 ttatttattgaatttcatctcatttaactactccaataactacaattaata 32831239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 39443793 - 39443875
Alignment:
Q  310 ctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    ||||||||||||||| ||||||| ||||| |||| ||| ||| ||||||||||||| |||| ||||   ||||||| ||||||    
T  39443793 ctattgaaatcaacaaaattaatcattttcttaataattgtgcacaaaccttaaacgactaatattataagatggatggagta 39443875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 7494954 - 7494909
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactaca 272  Q
    ||||||||| |||||||||||||| ||| ||||||| |||||||||    
T  7494954 ccttatttattgaatttcatccaacttaactactccgctaactaca 7494909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 11742644 - 11742592
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 279  Q
    ||||||||| |||| |||||| || ||| |||||||| |||||||||||||||    
T  11742644 ccttatttattgaacttcatcaaacttaactactccattaactacaattaata 11742592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 231 - 391
Target Start/End: Complemental strand, 20467 - 20306
Alignment:
Q  231 atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaatta 330  Q
    ||||| |||||||||||||| ||| ||||| |||||||| ||||||||| | | | |||| ||||||||||| ||||| | ||  |||||||||||||||    
T  20467 atttattgaatttcatccaacttaactacttcactaactgcaattaataagggtattttactaaatgatactaattttacaatcaaaatcaacacaatta 20368  T
Q  331 at-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    || ||||  |||| |||| || |||| |||||||  ||||||||||||||||||||||||||    
T  20367 atcatttaattaataatcttgcacaacccttaaagtactattatttagagatggagggagta 20306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 214 - 363
Target Start/End: Complemental strand, 34151 - 34000
Alignment:
Q  214 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| ||||||| ||||||| |||||||||||||| ||| ||| | |||||||||||||||||| | |   |||||||||||  ||| ||||| |||    
T  34151 ttccactattataccattatttattgaatttcatccaacttaactatttcactaactacaattaataagggtgttttagtaaatgccactaattttacta 34052  T
Q  313 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaa 363  Q
    ||||| |||| ||||||||| ||||  |||| ||||||| ||||||||||||    
T  34051 ttgaattcaatacaattaatcatttccttaataatcgtgcacaaaccttaaa 34000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 2022 - 2187
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| ||||||||||| ||| ||  || |||||||||||||||||||| |     |||||||||||||| | |||||   |||||||| ||||||    
T  2022 ccttatttattgaatttcatcgaatgtaattaatccactaactacaattaataaggatgttttagtaaatgatattaattttatcattgaaattaacaca 2121  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||||| | ||  |||| ||||||| |  |||||||||| ||| ||||||||||| ||||||||||    
T  2122 attaatcacttccttaataatcgtgcatgaaccttaaacgacttttatttagagacggagggagta 2187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 214 - 332
Target Start/End: Complemental strand, 816 - 697
Alignment:
Q  214 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 312  Q
    ||||||| ||||||| ||||||| ||||||||||||||||||   ||||||||||||||||| ||||   |   ||||||||||| || | ||||| | |    
T  816 ttccactattatacccttatttattgaatttcatccaatttaaacactccactaactacaatcaataaaggtgttttagtaaatgctattaattttacca 717  T
Q  313 ttgaaatcaacacaattaat 332  Q
    ||||||||||||||||||||    
T  716 ttgaaatcaacacaattaat 697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1391 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold1391
Description:

Target: scaffold1391; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 1875 - 1768
Alignment:
Q  287 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggag 385  Q
    |||||||||||||| | ||||  ||||  ||||||||||||||||| ||||| |||| ||||||| | |||| ||||| |||||||||||||| | ||||    
T  1875 tttagtaaatgatattaatttgactatcaaaatcaacacaattaattattttcttaataatcgtgcataaactttaaagaactattatttagaaacggag 1776  T
Q  386 ggagtatt 393  Q
    ||||||||    
T  1775 ggagtatt 1768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 392
Target Start/End: Original strand, 16095 - 16261
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||||||||||||  ||| || || || ||||||||||||||| |||   ||||||||||| || | |||||   ||| |||||||||||    
T  16095 ccttatttattgaatttcatccatcttaactgcttcattaactacaattaataagtgtgttttagtaaatgctattaattttatcattaaaatcaacaca 16194  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 392  Q
    |||||| ||||  |||| ||||||| ||||| ||||||| |||| ||||  |||| |||||| ||||    
T  16195 attaatcatttccttaataatcgtgaacaaatcttaaactactaatattgtgagacggagggggtat 16261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 393
Target Start/End: Original strand, 50201 - 50368
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| | |||||||| ||| |||  |||||||||||||  ||||||||     | | |||||||||||||| |||||   |||||||| ||||||    
T  50201 ccttatttatttaatttcattcaacttaattactccactaactgtaattaataaagatattatagtaaatgatactaattttatcattgaaattaacaca 50300  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 393  Q
    |||||| ||||  |||| ||||||| ||||||||||||| |||| ||||  |||| ||| ||||||||    
T  50301 attaatcatttccttaataatcgtgcacaaaccttaaacgactaatattgtgagacggatggagtatt 50368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 387
Target Start/End: Complemental strand, 8099 - 7938
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    ||||||||| |||| ||||||||| |||  ||||||||||||||||||||||| | |   ||| |||||| ||| | ||||| | ||  ||||||||| |    
T  8099 ccttatttattgaacttcatccaacttaattactccactaactacaattaataagggtgttttggtaaataatattaattttaccatccaaatcaacaaa 8000  T
Q  327 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggaggg 387  Q
    |||||| ||||  |||| || |||| |  |||| ||||| ||||||||||||||| ||||||    
T  7999 attaatcatttccttaataaccgtgcatcaaccgtaaacgactattatttagagacggaggg 7938  T

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Target: scaffold0294 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 292 - 391
Target Start/End: Original strand, 17097 - 17197
Alignment:
Q  292 taaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagt 390  Q
    |||||| |||| ||||| | ||||||||||||||||||||| ||||| |||| |||| || ||||||||||||| |||| ||||   ||||||| |||||    
T  17097 taaatgctactaattttaccattgaaatcaacacaattaatcattttcttaataatcatgcacaaaccttaaacgactaatattgttagatggatggagt 17196  T
Q  391 a 391  Q
    |    
T  17197 a 17197  T

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Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 229 - 391
Target Start/End: Complemental strand, 136153 - 135990
Alignment:
Q  229 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 328  Q
    ||||||| | ||||||||| || ||| ||||| ||||||||| |||||||| | |   ||||||||||| || | ||||| | |||||||||||||  ||    
T  136153 ttatttatttaatttcatcaaacttaactacttcactaactataattaataagggtgttttagtaaatgctattaattttaccattgaaatcaacattat 136054  T
Q  329 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    |||| ||||  |||| ||||||| | ||| ||||||| |||| ||||  |||| ||||||||||    
T  136053 taatcatttatttaataatcgtgcataaatcttaaacgactaatattgtgagacggagggagta 135990  T

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Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 227 - 332
Target Start/End: Original strand, 105681 - 105786
Alignment:
Q  227 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 326  Q
    |||||||||  ||||||||| ||| ||| ||||| |||||||||||||||||| | |   ||||||||| | || | ||||| | |||||||| ||||||    
T  105681 ccttatttatcgaatttcattcaacttaactacttcactaactacaattaataagggtgttttagtaaacgctattaattttaccattgaaataaacaca 105780  T
Q  327 attaat 332  Q
    ||||||    
T  105781 attaat 105786  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 279
Target Start/End: Complemental strand, 14297 - 14234
Alignment:
Q  217 cactgttatacctt-atttactgaatttcatccaatttagctactccactaactacaattaata 279  Q
    |||| ||||||||| ||||| ||||||||||| |||||| |||||||| |||||| ||||||||    
T  14297 cactattatacctttatttattgaatttcatcaaatttaactactccattaactataattaata 14234  T

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Target: scaffold0470 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 391
Target Start/End: Original strand, 1067 - 1147
Alignment:
Q  312 attgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 391  Q
    ||||||||||||| ||||||| ||||| |||| ||||||||  ||| ||||||| |||| ||||   ||||||||||||||    
T  1067 attgaaatcaacataattaatcatttttttaataatcgtgtgtaaatcttaaacgactaatattgtaagatggagggagta 1147  T

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