View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17011_high_3 (Length: 331)
Name: NF17011_high_3
Description: NF17011
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17011_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 11 - 304
Target Start/End: Original strand, 27323563 - 27323857
Alignment:
| Q |
11 |
cacagaatatttattagccattgtgacatttcaatttactatcatctctcgtattctaattactctggatttttattttgaaaaggaattctaactttga |
110 |
Q |
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| T |
27323563 |
cacaaaatatttattagccattgtgacatttcaatttactatcatctctcgtattctaattactctggatttttattttgaaaaggaattctaactttga |
27323662 |
T |
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| Q |
111 |
tttagtgttacattttacagtaattatattatcagcgttttttatttgatctaaaatgcttcttcttcactattagattttacatgcatttatcataagt |
210 |
Q |
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| T |
27323663 |
tttagtgttacattttacagtaattatattatcagcgttttttattttatctaaaatgtttcttcttcactattagattttacatgcatttatcataagt |
27323762 |
T |
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| Q |
211 |
caacttatactaagtacatgtttgggtcccttcaaaac-aaaacaagaaatacatgtttggttctgcgtccaaagccttcaaacgggcgaaaaga |
304 |
Q |
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|||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||| |
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| T |
27323763 |
caacttatactaagtacatgtttgggtcccctcaaaacaaaaacaaaaaatacatgtttggttctgcgtccaaagccttcaaacaggccaaaaga |
27323857 |
T |
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