View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17013_low_19 (Length: 239)
Name: NF17013_low_19
Description: NF17013
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17013_low_19 |
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Alignment Details
Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 6886924 - 6886704
Alignment:
| Q |
1 |
tataacttgaaggtctcacatgttcgatctcggatccaatatataaaacatttgtctcatgataatgaatcatcggtggttggatatacttattgaatag |
100 |
Q |
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| T |
6886924 |
tataacttgaaggtctcacatgttcgatctcggatccaatatataaaacatttgcctcatgatgataaatcatcggtggttggatatacttattgaatag |
6886825 |
T |
|
| Q |
101 |
aattgtctcttatagaattagacctagtttttaaaaccctatattactcacatgatgacaagtgatgaattataaagaatgttgaaacaatgaaaagtga |
200 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6886824 |
aattgtctcttatagaattagacctagttttaaaaaccctatattactcacatgatgacaagtgatgaattataaagaatgttgaaacaatgaaaagtga |
6886725 |
T |
|
| Q |
201 |
gcactccaactcccctatgaa |
221 |
Q |
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||||||||||||||||||||| |
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| T |
6886724 |
gcactccaactcccctatgaa |
6886704 |
T |
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