View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17015_high_4 (Length: 535)

Name: NF17015_high_4
Description: NF17015
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17015_high_4
NF17015_high_4
[»] chr1 (33 HSPs)
chr1 (1-520)||(2073681-2074204)
chr1 (1-520)||(2069335-2069858)
chr1 (326-432)||(17745219-17745325)
chr1 (318-432)||(40257398-40257513)
chr1 (318-429)||(51814493-51814605)
chr1 (332-432)||(28411343-28411444)
chr1 (319-432)||(10526823-10526937)
chr1 (319-432)||(11068805-11068919)
chr1 (316-432)||(6122791-6122908)
chr1 (319-411)||(9165178-9165271)
chr1 (320-432)||(44126396-44126509)
chr1 (318-432)||(41508830-41508945)
chr1 (318-375)||(8177201-8177259)
chr1 (318-411)||(8904413-8904507)
chr1 (319-384)||(19528337-19528403)
chr1 (319-432)||(31794226-31794340)
chr1 (319-432)||(52116743-52116857)
chr1 (336-432)||(12587287-12587383)
chr1 (318-382)||(25297771-25297836)
chr1 (319-426)||(42787208-42787316)
chr1 (319-432)||(50901581-50901695)
chr1 (319-432)||(1094525-1094639)
chr1 (362-432)||(6948039-6948109)
chr1 (319-384)||(9117119-9117185)
chr1 (319-432)||(16893394-16893508)
chr1 (319-372)||(19480527-19480581)
chr1 (321-410)||(33700757-33700847)
chr1 (319-384)||(47753714-47753780)
chr1 (318-410)||(6650594-6650687)
chr1 (319-360)||(16170013-16170054)
chr1 (319-352)||(38978985-38979018)
chr1 (319-360)||(42983409-42983450)
chr1 (319-375)||(51703779-51703836)
[»] chr5 (19 HSPs)
chr5 (319-432)||(14495767-14495881)
chr5 (319-432)||(29075781-29075895)
chr5 (319-432)||(16773807-16773921)
chr5 (317-384)||(29692396-29692464)
chr5 (326-384)||(1410669-1410728)
chr5 (330-432)||(21086725-21086828)
chr5 (319-432)||(16457810-16457924)
chr5 (326-432)||(19949578-19949684)
chr5 (319-432)||(21589288-21589402)
chr5 (326-385)||(16436625-16436684)
chr5 (393-432)||(27840981-27841020)
chr5 (330-432)||(43442207-43442310)
chr5 (319-384)||(5390862-5390926)
chr5 (319-411)||(25627057-25627150)
chr5 (392-425)||(31306837-31306870)
chr5 (319-432)||(43230736-43230852)
chr5 (319-355)||(892514-892550)
chr5 (319-382)||(6844729-6844793)
chr5 (319-374)||(21549157-21549213)
[»] chr3 (26 HSPs)
chr3 (323-432)||(4844473-4844583)
chr3 (323-432)||(4870169-4870279)
chr3 (318-432)||(10499071-10499186)
chr3 (326-432)||(13808847-13808954)
chr3 (323-432)||(2667866-2667976)
chr3 (342-429)||(28531023-28531111)
chr3 (319-410)||(14186648-14186739)
chr3 (327-432)||(51903840-51903946)
chr3 (318-374)||(5499427-5499484)
chr3 (319-360)||(16991542-16991583)
chr3 (318-382)||(31520617-31520682)
chr3 (324-432)||(38550366-38550475)
chr3 (318-384)||(8051213-8051280)
chr3 (318-432)||(36720380-36720495)
chr3 (319-432)||(4222141-4222255)
chr3 (319-432)||(10445101-10445216)
chr3 (319-377)||(31788987-31789046)
chr3 (319-357)||(203090-203128)
chr3 (318-375)||(7975417-7975475)
chr3 (319-384)||(14339610-14339676)
chr3 (319-384)||(21960551-21960617)
chr3 (319-372)||(42430335-42430388)
chr3 (318-375)||(46518627-46518685)
chr3 (327-374)||(11612307-11612355)
chr3 (323-355)||(17554454-17554486)
chr3 (330-425)||(32651407-32651503)
[»] chr8 (25 HSPs)
chr8 (319-426)||(23361617-23361725)
chr8 (318-432)||(4830486-4830601)
chr8 (318-432)||(8484998-8485113)
chr8 (319-432)||(20994419-20994534)
chr8 (319-432)||(968362-968476)
chr8 (362-432)||(14701379-14701449)
chr8 (321-429)||(2203494-2203603)
chr8 (319-375)||(32157191-32157248)
chr8 (318-384)||(16852339-16852406)
chr8 (318-432)||(28783059-28783174)
chr8 (335-432)||(7140725-7140822)
chr8 (319-432)||(8059632-8059746)
chr8 (319-432)||(11819776-11819890)
chr8 (319-432)||(26688865-26688979)
chr8 (319-432)||(27750730-27750844)
chr8 (322-410)||(35690048-35690137)
chr8 (318-384)||(5801046-5801113)
chr8 (318-384)||(19703497-19703564)
chr8 (339-432)||(6536540-6536634)
chr8 (362-432)||(24351690-24351760)
chr8 (319-432)||(30483846-30483960)
chr8 (362-432)||(33727835-33727905)
chr8 (320-384)||(29858059-29858124)
chr8 (315-355)||(22268973-22269013)
chr8 (388-432)||(43292398-43292442)
[»] chr2 (19 HSPs)
chr2 (318-432)||(25931005-25931120)
chr2 (317-432)||(37480073-37480189)
chr2 (318-384)||(39714991-39715058)
chr2 (318-432)||(21195638-21195753)
chr2 (318-384)||(34041598-34041665)
chr2 (319-425)||(41202250-41202357)
chr2 (319-432)||(1435064-1435177)
chr2 (316-385)||(29197385-29197455)
chr2 (319-432)||(42327357-42327471)
chr2 (318-432)||(23230567-23230681)
chr2 (326-374)||(3001386-3001435)
chr2 (319-375)||(4438998-4439055)
chr2 (319-431)||(19244109-19244222)
chr2 (320-432)||(37755933-37756046)
chr2 (318-377)||(7799052-7799112)
chr2 (396-432)||(11127965-11128001)
chr2 (320-375)||(16918597-16918653)
chr2 (319-374)||(18259730-18259786)
chr2 (319-355)||(32106566-32106602)
[»] scaffold0118 (1 HSPs)
scaffold0118 (319-432)||(41595-41709)
[»] chr7 (25 HSPs)
chr7 (319-432)||(15137553-15137667)
chr7 (317-360)||(35119381-35119424)
chr7 (318-384)||(45709718-45709785)
chr7 (326-432)||(41519227-41519333)
chr7 (326-432)||(43663057-43663164)
chr7 (319-384)||(22760863-22760929)
chr7 (319-384)||(23301612-23301678)
chr7 (319-432)||(26459372-26459486)
chr7 (319-384)||(48771938-48772004)
chr7 (319-386)||(25021343-25021411)
chr7 (319-358)||(4161288-4161327)
chr7 (322-432)||(7721372-7721483)
chr7 (318-384)||(23552117-23552184)
chr7 (393-432)||(24438209-24438248)
chr7 (319-372)||(7801180-7801234)
chr7 (319-432)||(20335793-20335907)
chr7 (326-375)||(23595736-23595786)
chr7 (319-432)||(25590611-25590725)
chr7 (319-372)||(25956314-25956368)
chr7 (318-375)||(26526289-26526347)
chr7 (319-384)||(43590907-43590973)
chr7 (318-355)||(41487361-41487398)
chr7 (321-384)||(21854550-21854614)
chr7 (345-432)||(42262057-42262145)
chr7 (388-432)||(48582799-48582843)
[»] chr4 (15 HSPs)
chr4 (319-432)||(28635696-28635810)
chr4 (319-432)||(13496241-13496355)
chr4 (318-432)||(7949416-7949531)
chr4 (318-432)||(51250484-51250599)
chr4 (319-384)||(47044717-47044783)
chr4 (319-432)||(51948480-51948594)
chr4 (319-382)||(9241037-9241101)
chr4 (319-429)||(19229173-19229283)
chr4 (319-383)||(19238588-19238653)
chr4 (319-411)||(37109334-37109427)
chr4 (326-384)||(21660154-21660213)
chr4 (326-384)||(21668918-21668977)
chr4 (317-360)||(27965545-27965588)
chr4 (319-429)||(55427165-55427276)
chr4 (319-426)||(46545711-46545819)
[»] chr6 (17 HSPs)
chr6 (319-377)||(24641207-24641266)
chr6 (318-432)||(31622953-31623068)
chr6 (318-432)||(33549103-33549218)
chr6 (326-415)||(6776586-6776676)
chr6 (318-432)||(12234469-12234584)
chr6 (320-432)||(6758384-6758497)
chr6 (330-425)||(28363948-28364044)
chr6 (317-375)||(12188322-12188381)
chr6 (321-360)||(32613175-32613214)
chr6 (339-385)||(346551-346597)
chr6 (319-384)||(21418470-21418536)
chr6 (319-384)||(30127400-30127466)
chr6 (399-432)||(31282523-31282556)
chr6 (326-355)||(34444810-34444839)
chr6 (319-355)||(28028530-28028566)
chr6 (319-374)||(32201905-32201961)
chr6 (326-358)||(33931982-33932014)
[»] scaffold0299 (1 HSPs)
scaffold0299 (326-414)||(11535-11624)
[»] scaffold0258 (1 HSPs)
scaffold0258 (319-432)||(15285-15399)
[»] scaffold0187 (2 HSPs)
scaffold0187 (319-352)||(12465-12498)
scaffold0187 (319-352)||(22793-22826)
[»] scaffold1367 (1 HSPs)
scaffold1367 (326-384)||(850-909)
[»] scaffold0126 (1 HSPs)
scaffold0126 (395-432)||(25309-25346)
[»] scaffold0070 (1 HSPs)
scaffold0070 (319-360)||(42555-42596)
[»] scaffold0417 (1 HSPs)
scaffold0417 (316-360)||(10216-10260)


Alignment Details
Target: chr1 (Bit Score: 411; Significance: 0; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 1 - 520
Target Start/End: Original strand, 2073681 - 2074204
Alignment:
Q  1 taacatcaatgtctctttgtataggcgccacacaatgcggaggaactgatgtattaccaaccaatatgtgagtatcagaaggagtctcctcaaagtctga 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2073681 taacatgaatgtctctttgtataggcgccacacaatgcggaggaattgatgtattaccaaccaaaatgtgagtatcagaaggagtctcctcaaagtctga 2073780  T
Q  101 aacttgaatattcgcttgtgcattcacgacattttctccacacaattatcattggaaggagattcatgtgcgggatccaaaataaatggagcatcaactt 200  Q
    ||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2073781 aacttgaatattcgcttgtgcattcacaacatt--ctccacacaattatcattggaaggagattcatgtacgggatccaaaataaatggagcatcaactt 2073878  T
Q  201 gatggtttgattcgacgacatcattacgaatt-----atctgtcacattgtgcaaaaccatatagaaagaagtgtcaaccttatctgtaactgcaaatgt 295  Q
    ||||||||||||||||||||| ||||||||||     ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2073879 gatggtttgattcgacgacataattacgaattcttttatctgtcacattgtgcaaaaccatacagaaagaagtgtcaaccttatctgtaactgcaaatgt 2073978  T
Q  296 gtctttaacactttcaaccaccaaacccatttgggttggcctggtggtattgacttgggatctggcgtgtgctcctcctcgacgtctcatactcaaatct 395  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||| |||||||     
T  2073979 gtctttaacactttcaaccaccaaacccatttgggttggcctggttgtattgacttgggatctagcgtgtgctcctcctcgaagtctcatattcaaatcc 2074078  T
Q  396 ctctggtgtcaatttggatgagctaatttagcttctt-nnnnnnnncattttcaaccaccataagttgctttgtagggtgctcagtcactgattcagacg 494  Q
    |||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2074079 ctctggtgtcaatttggatgagctaatttagcttcttaaaaaaaaacattttcaaccaccataagttgctttgtagggtgctcagtcactgattcagacg 2074178  T
Q  495 atgttgacttaattgtttgttgtttg 520  Q
    ||||| ||||||||||||||||||||    
T  2074179 atgttaacttaattgtttgttgtttg 2074204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 1 - 520
Target Start/End: Original strand, 2069335 - 2069858
Alignment:
Q  1 taacatcaatgtctctttgtataggcgccacacaatgcggaggaactgatgtattaccaaccaatatgtgagtatcagaaggagtctcctcaaagtctga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2069335 taacatcaatgtctctttgtataggcgccacacaatgcagaggaattgatgtattaccaaccaaaatgtgagtatcagaaggagtctcctcaaagtctga 2069434  T
Q  101 aacttgaatattcgcttgtgcattcacgacattttctccacacaattatcattggaaggagattcatgtgcgggatccaaaataaatggagcatcaactt 200  Q
    |||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2069435 aacttgaatattcgcttgtgcattcatgacatt--ctccacacaattatcattggaaggagattcatgtacgggatccaaaataaatggagcatcaactt 2069532  T
Q  201 gatggtttgattcgacgacatcattacgaatt-----atctgtcacattgtgcaaaaccatatagaaagaagtgtcaaccttatctgtaactgcaaatgt 295  Q
    ||||||||||||||||||||| ||||||||||     ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  2069533 gatggtttgattcgacgacataattacgaattcttttatctgtcacattgtgcaaaaccatacagaaagaagtgtcaaccttatctgtaattgcaaatgt 2069632  T
Q  296 gtctttaacactttcaaccaccaaacccatttgggttggcctggtggtattgacttgggatctggcgtgtgctcctcctcgacgtctcatactcaaatct 395  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||| |||||||     
T  2069633 gtctttaacactttcaaccaccacacccatttgggttggcctggttgtattgacttgggatctggcatgtgctcctcctcgaagtctcatattcaaatcc 2069732  T
Q  396 ctctggtgtcaatttggatgagctaatttagcttctt-nnnnnnnncattttcaaccaccataagttgctttgtagggtgctcagtcactgattcagacg 494  Q
    |||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2069733 ctctggtgtcaatttggatgagctaatttagcttcttaaaaaaaaacattttcaaccaccataagttgctttgtagggtgctcagtcactgattcagacg 2069832  T
Q  495 atgttgacttaattgtttgttgtttg 520  Q
    ||||| ||||| ||||||||||||||    
T  2069833 atgttaacttagttgtttgttgtttg 2069858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 326 - 432
Target Start/End: Complemental strand, 17745325 - 17745219
Alignment:
Q  326 ttgggttggcctggtggtattgacttgggatctg-gcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagctaattt 424  Q
    |||||||||||| ||||||||| ||||||| ||| |||||||||||||||||| |||||||  || | |||||||||||||||||| | || | ||||||    
T  17745325 ttgggttggcctagtggtattggcttgggacctgagcgtgtgctcctcctcgaggtctcatgttcgattctctctggtgtcaatttaggtg-gttaattt 17745227  T
Q  425 agcttctt 432  Q
    ||||||||    
T  17745226 agcttctt 17745219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 432
Target Start/End: Original strand, 40257398 - 40257513
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatctggc-gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatga 416  Q
    ||||||| |||||||||||||||||||||| |||| || ||||  |||||||||||||||| ||||||   |||| ||| || ||||||||||||| ||     
T  40257398 aaacccacttgggttggcctggtggtattggcttgagacctgggagtgtgctcctcctcgaggtctcaagttcaattctatccggtgtcaatttgggtgg 40257497  T
Q  417 gctaatttagcttctt 432  Q
    |||| |||||||||||    
T  40257498 gctagtttagcttctt 40257513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 429
Target Start/End: Original strand, 51814493 - 51814605
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatctg-gcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatga 416  Q
    ||||||| ||||||||||||| ||||||||||||| |||||| | |||||||||||||| | ||||||   || | |||||| |||| |||||||| ||     
T  51814493 aaacccacttgggttggcctgatggtattgacttgagatctgagagtgtgctcctcctcaaggtctcaggttcgattctctccggtgccaatttgggtgg 51814592  T
Q  417 gctaatttagctt 429  Q
    |||||||||||||    
T  51814593 gctaatttagctt 51814605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 432
Target Start/End: Original strand, 28411343 - 28411444
Alignment:
Q  332 tggcctggtggtattgacttgggatctg-gcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagctaatttagcttc 430  Q
    ||||||||||||||||||||||||| || | ||||||||||| | || |||||| | |||| ||||||||||| ||||||  ||||||| ||||| ||||    
T  28411343 tggcctggtggtattgacttgggatatgagagtgtgctcctctttgaggtctcagattcaattctctctggtgccaatttaaatgagctcatttaacttc 28411442  T
Q  431 tt 432  Q
    ||    
T  28411443 tt 28411444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 319 - 432
Target Start/End: Original strand, 10526823 - 10526937
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatctggc-gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||||||||||||| |  ||||||||| ||||||| ||||  || ||||||||||| | |||||| | || | ||||||||| |||||||||| || |    
T  10526823 aacccatttgggttggtccagtggtattggcttgggacctgggagtttgctcctcctcaaggtctcagattcgattctctctggagtcaatttgggtggg 10526922  T
Q  418 ctaatttagcttctt 432  Q
     ||||||||||||||    
T  10526923 ttaatttagcttctt 10526937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 319 - 432
Target Start/End: Complemental strand, 11068919 - 11068805
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggat-ctggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||||||||||||  ||||||||||||||||||||| | || ||||||||||| | ||   |||| | |||| ||||||  ||||||||||  ||| |    
T  11068919 aacccatttgggttgatctggtggtattgacttgggatccaggagtgtgctcctctttgagacctcagattcaattctctccagtgtcaatttaaatggg 11068820  T
Q  418 ctaatttagcttctt 432  Q
    |||||||||||||||    
T  11068819 ctaatttagcttctt 11068805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 316 - 432
Target Start/End: Original strand, 6122791 - 6122908
Alignment:
Q  316 ccaaacccatttgggttggcctggtggtattgacttgggatctggc-gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggat 414  Q
    |||||||||||||||||| ||| ||||||| | |||||||  |||  |||||||||||||| | ||||||   || | || |||| |||||||||||| |    
T  6122791 ccaaacccatttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttgggt 6122890  T
Q  415 gagctaatttagcttctt 432  Q
    | ||||||||||||||||    
T  6122891 gggctaatttagcttctt 6122908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 411
Target Start/End: Complemental strand, 9165271 - 9165178
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttg 411  Q
    |||||| |||||||||||| ||||||||| ||||||| || || |||||||||||||| | ||||||   |||| ||||||||||| |||||||    
T  9165271 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctcaggttcaattctctctggtgccaatttg 9165178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 320 - 432
Target Start/End: Original strand, 44126396 - 44126509
Alignment:
Q  320 acccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagc 418  Q
    ||||| |||||||||||||||||||||||| ||||| || || |||||||||||| ||| |||||| | |  | ||||||| ||| |||||| | |  ||    
T  44126396 acccacttgggttggcctggtggtattgacctgggacctgggagtgtgctcctccacgaggtctcagatttgattctctctagtgccaatttaggtaggc 44126495  T
Q  419 taatttagcttctt 432  Q
    ||||||||||||||    
T  44126496 taatttagcttctt 44126509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 432
Target Start/End: Original strand, 41508830 - 41508945
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatga 416  Q
    ||||||| ||||||||||||||||||| ||  ||||||||| || |||||||||||||| | |||||| | | || ||  || |||||||| |||  ||     
T  41508830 aaacccacttgggttggcctggtggtactggtttgggatctgggagtgtgctcctcctcaaggtctcagatttaattccatccggtgtcaacttgagtgg 41508929  T
Q  417 gctaatttagcttctt 432  Q
    ||||||||||||||||    
T  41508930 gctaatttagcttctt 41508945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 375
Target Start/End: Complemental strand, 8177259 - 8177201
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctc 375  Q
    ||||||||||| |||||||| ||||||||| |||||||||| || ||||||||||||||    
T  8177259 aaacccatttgagttggcctagtggtattggcttgggatctgggagtgtgctcctcctc 8177201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 411
Target Start/End: Original strand, 8904413 - 8904507
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatctg-gcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttg 411  Q
    ||||||| |||||||||||| || ||||||||||||||| || | |||||||||||||| | ||||||   || | ||||||||||| |||||||    
T  8904413 aaacccacttgggttggcctagtagtattgacttgggatatgtgagtgtgctcctcctcaaggtctcaagttcgattctctctggtgccaatttg 8904507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 384
Target Start/End: Complemental strand, 19528403 - 19528337
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctca 384  Q
    |||||| |||||||||||||||||||||| ||||||||||  | |||||||||||||| | ||||||    
T  19528403 aacccacttgggttggcctggtggtattggcttgggatctatgagtgtgctcctcctcaaggtctca 19528337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 432
Target Start/End: Complemental strand, 31794340 - 31794226
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatctggc-gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| |||||||||||| ||||||||| |||||||  |||  |||||||||||||| | ||||     || | || ||||||||||||||||| || |    
T  31794340 aacccacttgggttggcctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtctagagttcgattccctctggtgtcaatttgggtggg 31794241  T
Q  418 ctaatttagcttctt 432  Q
    |||||||||||||||    
T  31794240 ctaatttagcttctt 31794226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 432
Target Start/End: Complemental strand, 52116857 - 52116743
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttggga-tctggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| |||||||||||||||||||||| ||||||| |  || |||||||||||||| | ||||||   |||| |||| || ||| |||||  | || |    
T  52116857 aacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcaattctccctagtgccaattaaggtggg 52116758  T
Q  418 ctaatttagcttctt 432  Q
    |||||||||||||||    
T  52116757 ctaatttagcttctt 52116743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 336 - 432
Target Start/End: Original strand, 12587287 - 12587383
Alignment:
Q  336 ctggtggtattgacttgggatctg-gcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagctaatttagcttctt 432  Q
    |||||| ||||||||||||||||| | |||||||||||||||| ||||||   || | |||||| |||| |||||| | || ||||||||||||||||    
T  12587287 ctggtgatattgacttgggatctgtgagtgtgctcctcctcgaggtctcaggttcgattctctccggtg-caatttaggtgggctaatttagcttctt 12587383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 318 - 382
Target Start/End: Original strand, 25297771 - 25297836
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatctg-gcgtgtgctcctcctcgacgtct 382  Q
    ||||||| ||||||||| || ||||||||||||| ||||||| | |||||||||||||||| ||||    
T  25297771 aaacccacttgggttggtctagtggtattgacttaggatctgagagtgtgctcctcctcgaggtct 25297836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 426
Target Start/End: Original strand, 42787208 - 42787316
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatctg-gcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| || ||||||||| |||||||||||||||||  || | ||| | |||||||| | |||||| | || | ||||||| ||||||||||| |||||    
T  42787208 aacccagttaggttggcctagtggtattgacttgggacttgagagtgcgttcctcctcaaagtctcagattcgagtctctctagtgtcaatttgaatgag 42787307  T
Q  418 ctaatttag 426  Q
     ||||||||    
T  42787308 ttaatttag 42787316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 432
Target Start/End: Original strand, 50901581 - 50901695
Alignment:
Q  319 aacccatttgggttggcctggtggta-ttgacttgggatctggc-gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatga 416  Q
    |||||| |||||||||||| |||||| ||| ||||||| ||||  |||||||||||||||| |||||| | || | ||||||  ||| |||||| | ||     
T  50901581 aacccacttgggttggcctagtggtaattggcttgggacctggtagtgtgctcctcctcgaggtctcaaattcgattctctc-agtgccaatttaggtgg 50901679  T
Q  417 gctaatttagcttctt 432  Q
    ||||||||||||||||    
T  50901680 gctaatttagcttctt 50901695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 432
Target Start/End: Original strand, 1094525 - 1094639
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatctg-gcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| |||||||||  || |||||||||||||| | ||| | |||||||||||| ||| |||||| | || | |||||| |||| |||||| | || |    
T  1094525 aacccacttgggttggtttgttggtattgacttggaacctgtgagtgtgctcctccacgaggtctcaaattcgattctctccggtgccaatttaggtggg 1094624  T
Q  418 ctaatttagcttctt 432  Q
    |||||||| ||||||    
T  1094625 ctaatttaacttctt 1094639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 362 - 432
Target Start/End: Complemental strand, 6948109 - 6948039
Alignment:
Q  362 gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagctaatttagcttctt 432  Q
    ||||||| |||||||| |||||||  |||| |||| | ||||||||||| |||||| ||||||| ||||||    
T  6948109 gtgtgctgctcctcgaggtctcatgttcaattctcaccggtgtcaatttagatgagttaatttaacttctt 6948039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 9117119 - 9117185
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatctgg-cgtgtgctcctcctcgacgtctca 384  Q
    |||||||||||||||||| | |||||| | ||||||||||||  ||||||||||||| || ||||||    
T  9117119 aacccatttgggttggccggttggtatgggcttgggatctggaagtgtgctcctccttgaggtctca 9117185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 432
Target Start/End: Original strand, 16893394 - 16893508
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatctggc-gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| |||||||| |||| |||||||| |||| ||| |||  |||| ||||||||||| ||||||   || | | |||| ||||||||||||  || |    
T  16893394 aacccacttgggttgacctgttggtattggcttgagatttgggagtgtactcctcctcgaggtctcaggttcgattttctccggtgtcaatttgagtggg 16893493  T
Q  418 ctaatttagcttctt 432  Q
    |||||||||||||||    
T  16893494 ctaatttagcttctt 16893508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 372
Target Start/End: Original strand, 19480527 - 19480581
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatc-tggcgtgtgctcctc 372  Q
    |||||||||||||||||||  |||| ||||||||||||| ||| |||||||||||    
T  19480527 aacccatttgggttggccttatggtgttgacttgggatcttggagtgtgctcctc 19480581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 321 - 410
Target Start/End: Complemental strand, 33700847 - 33700757
Alignment:
Q  321 cccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaattt 410  Q
    |||| |||||||||||| ||||||||| ||||| |||| || |||||||||||||| | ||||||   || | ||||||||||| ||||||    
T  33700847 cccacttgggttggcctagtggtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 33700757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 47753714 - 47753780
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctca 384  Q
    ||||||||| ||||| |||||| ||||||||||||||||| ||  ||||||||||||| | ||||||    
T  47753714 aacccatttaggttgacctggtcgtattgacttgggatctaggactgtgctcctcctcaaggtctca 47753780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 410
Target Start/End: Original strand, 6650594 - 6650687
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatctggc-gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaattt 410  Q
    ||||||| || ||||||||| ||||||||| ||||||||| ||  || ||||||||||| | ||||||   || | ||||||||||||||||||    
T  6650594 aaacccaattaggttggcctagtggtattggcttgggatcggggagtatgctcctcctcaatgtctcaggttcgattctctctggtgtcaattt 6650687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 360
Target Start/End: Complemental strand, 16170054 - 16170013
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatctgg 360  Q
    |||||| ||||||| |||||||||||||||||||||| ||||    
T  16170054 aacccacttgggttagcctggtggtattgacttgggacctgg 16170013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 352
Target Start/End: Complemental strand, 38979018 - 38978985
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttg 352  Q
    ||||||||||||||||||| ||||||||||||||    
T  38979018 aacccatttgggttggcctagtggtattgacttg 38978985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 360
Target Start/End: Complemental strand, 42983450 - 42983409
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatctgg 360  Q
    |||| |||||||||||| |||||||||||||||| |||||||    
T  42983450 aacctatttgggttggcatggtggtattgacttgagatctgg 42983409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 51703779 - 51703836
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctc 375  Q
    |||||||||||||||| || ||||||||| ||||| |||| || ||||||||||||||    
T  51703779 aacccatttgggttggtctagtggtattggcttggaatctgggagtgtgctcctcctc 51703836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 6e-20; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 319 - 432
Target Start/End: Complemental strand, 14495881 - 14495767
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||| |||||| | |  | |||||| | || |||||| |||| |    
T  14495881 aacccatttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcagatttgattctctccgatgccaatttagatggg 14495782  T
Q  418 ctaatttagcttctt 432  Q
    ||| |||||||||||    
T  14495781 ctagtttagcttctt 14495767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 319 - 432
Target Start/End: Original strand, 29075781 - 29075895
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatctggc-gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| ||||||| |||| ||||||||| ||||||||||||  ||||||||||||||||  ||||||  || | ||||||||||| |||||| |||| |    
T  29075781 aacccacttgggtttgcctagtggtattggcttgggatctgggagtgtgctcctcctcgagatctcatgttcgattctctctggtgccaatttagatggg 29075880  T
Q  418 ctaatttagcttctt 432  Q
    |||||||||||||||    
T  29075881 ctaatttagcttctt 29075895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 319 - 432
Target Start/End: Original strand, 16773807 - 16773921
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| ||| ||||| |||||||||||||||||||| || || |||||||||||||||| ||||||   || | |||||||| || |||||| | || |    
T  16773807 aacccacttgagttggtctggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctgatgccaatttaggtggg 16773906  T
Q  418 ctaatttagcttctt 432  Q
    |||||||||||||||    
T  16773907 ctaatttagcttctt 16773921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 384
Target Start/End: Complemental strand, 29692464 - 29692396
Alignment:
Q  317 caaacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctca 384  Q
    |||||||||||||||||| ||||||||||||  ||||||||| || |||||||||||||| | ||||||    
T  29692464 caaacccatttgggttggtctggtggtattggattgggatctgggagtgtgctcctcctcaaagtctca 29692396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 326 - 384
Target Start/End: Complemental strand, 1410728 - 1410669
Alignment:
Q  326 ttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctca 384  Q
    ||||||||| ||||||||||||||||||||| | || |||||||||||||||| ||||||    
T  1410728 ttgggttggtctggtggtattgacttgggatatgggagtgtgctcctcctcgaggtctca 1410669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 330 - 432
Target Start/End: Original strand, 21086725 - 21086828
Alignment:
Q  330 gttggcctggtggtattgacttgggatctggc-gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagctaatttagct 428  Q
    ||||| ||| ||||||||| || ||||||||| |||||||||||||| |  ||||| | || | | |||||||||||||||| ||||| |||||||| ||    
T  21086725 gttggtctgatggtattgatttaggatctggcagtgtgctcctcctcaagatctcagattcgattatctctggtgtcaatttagatgacctaatttaact 21086824  T
Q  429 tctt 432  Q
    ||||    
T  21086825 tctt 21086828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 432
Target Start/End: Original strand, 16457810 - 16457924
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatc-tggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| || ||||||||||||||||||| ||||||| | ||| |||||||||||||| | |||||||  |||| |||| | |||| |||||||  || |    
T  16457810 aacccacttaggttggcctggtggtattggcttgggaccttggagtgtgctcctcctcaaggtctcatgttcaattctccccggtgccaatttgcgtggg 16457909  T
Q  418 ctaatttagcttctt 432  Q
    ||| ||||| |||||    
T  16457910 ctagtttaggttctt 16457924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 432
Target Start/End: Complemental strand, 19949684 - 19949578
Alignment:
Q  326 ttgggttggcctggtggtattgacttgggatctggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagctaattta 425  Q
    |||||||| | |||||||||||||||| ||||| | ||||||||||||||||  |||||   |||| | || | |||||||||||||||   ||||||||    
T  19949684 ttgggttgacttggtggtattgacttgagatctagagtgtgctcctcctcgagctctcaggttcaattttcaccggtgtcaatttggatagactaattta 19949585  T
Q  426 gcttctt 432  Q
     ||||||    
T  19949584 acttctt 19949578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 432
Target Start/End: Original strand, 21589288 - 21589402
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| |||||||||||||||||||||| ||||||| || || || |||| |||||||| ||||||   || | || |||||||| |||||| | || |    
T  21589288 aacccacttgggttggcctggtggtattggcttgggacctgggagtctgctactcctcgatgtctcaggttcgattccctctggtgccaatttaggtggg 21589387  T
Q  418 ctaatttagcttctt 432  Q
    ||| |||||||||||    
T  21589388 ctagtttagcttctt 21589402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 385
Target Start/End: Original strand, 16436625 - 16436684
Alignment:
Q  326 ttgggttggcctggtggtattgacttgggatctggcgtgtgctcctcctcgacgtctcat 385  Q
    |||||||||||| ||||||||| |||||||  ||| |||||||||||||| | |||||||    
T  16436625 ttgggttggcctagtggtattggcttgggacttggagtgtgctcctcctcaaggtctcat 16436684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 432
Target Start/End: Complemental strand, 27841020 - 27840981
Alignment:
Q  393 tctctctggtgtcaatttggatgagctaatttagcttctt 432  Q
    |||||||||||| |||||||||| ||||||||||||||||    
T  27841020 tctctctggtgttaatttggatgggctaatttagcttctt 27840981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 432
Target Start/End: Original strand, 43442207 - 43442310
Alignment:
Q  330 gttggcctggtggtattgacttgggatctggc-gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagctaatttagct 428  Q
    |||||| | |||||||||  ||| |||||||  |||||||||||||| | ||||||   || | |||||||| |||||||||||||| |||||||||| |    
T  43442207 gttggcatagtggtattggtttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctgttgtcaatttggatgggctaatttagtt 43442306  T
Q  429 tctt 432  Q
    ||||    
T  43442307 tctt 43442310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 384
Target Start/End: Complemental strand, 5390926 - 5390862
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatctggcgtgtgctcctcctcgacgtctca 384  Q
    ||||||||||||||||||| ||||||||| ||||||  || | | |||||||||||||| ||||||    
T  5390926 aacccatttgggttggcctagtggtattggcttggg-gcttgggagtgctcctcctcgaggtctca 5390862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 411
Target Start/End: Original strand, 25627057 - 25627150
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttggga-tctggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttg 411  Q
    |||||| |||||||||||| ||||||||| ||||| | |  || |||||||||||||| | ||||||   || | |||||||||||||||||||    
T  25627057 aacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaatttg 25627150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 425
Target Start/End: Original strand, 31306837 - 31306870
Alignment:
Q  392 atctctctggtgtcaatttggatgagctaattta 425  Q
    ||||||||||||||||||||||||| ||||||||    
T  31306837 atctctctggtgtcaatttggatgaactaattta 31306870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 432
Target Start/End: Complemental strand, 43230852 - 43230736
Alignment:
Q  319 aacccatttgggttggcctggtggtat--tgacttgggatctg-gcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatg 415  Q
    |||||| |||||||||||| |||||||  || |||||| |||| | |||||||||||||  |  ||||| | |||| ||||||| |||||||||| ||||    
T  43230852 aacccacttgggttggcctagtggtatattggcttgggttctgagagtgtgctcctccttaagatctcagattcaattctctcttgtgtcaatttagatg 43230753  T
Q  416 agctaatttagcttctt 432  Q
    || || |||| ||||||    
T  43230752 agttagtttaacttctt 43230736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 355
Target Start/End: Complemental strand, 892550 - 892514
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttggga 355  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  892550 aacccatttgggttggcctagtggtattggcttggga 892514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 382
Target Start/End: Original strand, 6844729 - 6844793
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtct 382  Q
    |||||| ||||||||||| |||||||||||||||| || | || ||||| |||||||||| ||||    
T  6844729 aacccacttgggttggccaggtggtattgacttggaatttgggagtgtgttcctcctcgaggtct 6844793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 374
Target Start/End: Complemental strand, 21549213 - 21549157
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcct 374  Q
    |||||| |||||||||||| ||||||||| ||||||| || || |||||||||||||    
T  21549213 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcct 21549157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 6e-20; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 323 - 432
Target Start/End: Complemental strand, 4844583 - 4844473
Alignment:
Q  323 catttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagctaa 421  Q
    |||||||||||| ||||||||||||||||||||||| || |||||||||||||||| ||||||   || | |||||| |||| |||||||  || |||||    
T  4844583 catttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaa 4844484  T
Q  422 tttagcttctt 432  Q
    |||||||||||    
T  4844483 tttagcttctt 4844473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 323 - 432
Target Start/End: Complemental strand, 4870279 - 4870169
Alignment:
Q  323 catttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagctaa 421  Q
    |||||||||||| ||||||||||||||||||||||| || |||||||||||||||| ||||||   || | |||||| |||| |||||||  || |||||    
T  4870279 catttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaa 4870180  T
Q  422 tttagcttctt 432  Q
    |||||||||||    
T  4870179 tttagcttctt 4870169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 318 - 432
Target Start/End: Complemental strand, 10499186 - 10499071
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatga 416  Q
    ||||||| |||||||||||||||||||||| |||||||||| || || ||||| |||| || ||||||   || | |||||| | ||||||||||| ||     
T  10499186 aaacccacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtctcaggttcgattctctccgatgtcaatttgggtgg 10499087  T
Q  417 gctaatttagcttctt 432  Q
    ||||||||||||||||    
T  10499086 gctaatttagcttctt 10499071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 326 - 432
Target Start/End: Complemental strand, 13808954 - 13808847
Alignment:
Q  326 ttgggttggcctggtggtattgacttgggatctggc-gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagctaattt 424  Q
    ||||||||| |||||  ||||||||||||||||||| |||||||||||||| | ||||||   |||| |||||||  ||||||||||||||   ||||||    
T  13808954 ttgggttggtctggtcttattgacttgggatctggcagtgtgctcctcctctaggtctcaggttcaattctctctaatgtcaatttggatggattaattt 13808855  T
Q  425 agcttctt 432  Q
    ||||||||    
T  13808854 agcttctt 13808847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 432
Target Start/End: Original strand, 2667866 - 2667976
Alignment:
Q  323 catttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagctaa 421  Q
    ||||||||||||||||||||||||| |||||||||| || |||||||| ||||||| ||||||   || | | ||||| |||||||||| | || ||||     
T  2667866 catttgggttggcctggtggtattggcttgggatctgggagtgtgctcttcctcgaggtctcaggttcgattatctctagtgtcaatttaggtgggctag 2667965  T
Q  422 tttagcttctt 432  Q
    |||||||||||    
T  2667966 tttagcttctt 2667976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 342 - 429
Target Start/End: Complemental strand, 28531111 - 28531023
Alignment:
Q  342 gtattgacttgggatctggc-gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagctaatttagctt 429  Q
    |||||| ||||||||||||  || ||||||||||||| |||| |  ||||| |||||||||||||||||||| || |||||||||||||    
T  28531111 gtattggcttgggatctgggagtatgctcctcctcgaggtcttaggctcaattctctctggtgtcaatttgggtgggctaatttagctt 28531023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 410
Target Start/End: Original strand, 14186648 - 14186739
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatctggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaattt 410  Q
    |||||| |||||||||||| ||||||||| ||||||| |||| |||||||||||||| | ||||||   || | |||||| |||||||||||    
T  14186648 aacccacttgggttggcctagtggtattgtcttgggacctggagtgtgctcctcctcaaggtctcaggttcgattctctccggtgtcaattt 14186739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 327 - 432
Target Start/End: Complemental strand, 51903946 - 51903840
Alignment:
Q  327 tgggttggcctggtggtattgacttgggatctggc-gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagctaattta 425  Q
    ||||||| |||| |||||||| ||||||||||||  |||||||||||||||  ||||||   || | |||||| ||||||||||||  || |||||||||    
T  51903946 tgggttgacctgttggtattggcttgggatctgggagtgtgctcctcctcgtggtctcaggttcgattctctccggtgtcaatttgagtgggctaattta 51903847  T
Q  426 gcttctt 432  Q
    |||||||    
T  51903846 gcttctt 51903840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 5499484 - 5499427
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatctg-gcgtgtgctcctcct 374  Q
    ||||||| ||||||||||||||||||||||||||| |||||| | |||||||||||||    
T  5499484 aaacccacttgggttggcctggtggtattgacttgagatctgagagtgtgctcctcct 5499427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 360
Target Start/End: Original strand, 16991542 - 16991583
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatctgg 360  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  16991542 aacccatttgggttggcctggtggtattggcttgggatctgg 16991583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 382
Target Start/End: Complemental strand, 31520682 - 31520617
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtct 382  Q
    ||||||| ||||||||||||||||| |||| |||||||||| || |||||||||||||||| ||||    
T  31520682 aaacccacttgggttggcctggtggcattggcttgggatctgggagtgtgctcctcctcgaggtct 31520617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 432
Target Start/End: Complemental strand, 38550475 - 38550366
Alignment:
Q  324 atttgggttggcctggtggtattgacttgggatctggc-gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagctaat 422  Q
    ||||||||||||||| |||||||||||| || | |||  ||||||||||||| || |||| |   |||| |||||   |||| |||||||||||||||||    
T  38550475 atttgggttggcctgttggtattgacttagggtttgggagtgtgctcctccttgaggtctgaggttcaattctcttctgtgttaatttggatgagctaat 38550376  T
Q  423 ttagcttctt 432  Q
    ||||||||||    
T  38550375 ttagcttctt 38550366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 384
Target Start/End: Original strand, 8051213 - 8051280
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatctggc-gtgtgctcctcctcgacgtctca 384  Q
    ||||||| |||||||||||||||||||||| ||||||| ||||| || |||| |||||||| ||||||    
T  8051213 aaacccacttgggttggcctggtggtattggcttgggacctggcagtatgcttctcctcgaggtctca 8051280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 432
Target Start/End: Original strand, 36720380 - 36720495
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatga 416  Q
    ||||||| ||||||||| |||||||||||| |||||||| | || |||||||||||||||| || |||   || | ||||||| |||||||||| | ||     
T  36720380 aaacccacttgggttggtctggtggtattggcttgggatatgggagtgtgctcctcctcgaggtttcaggttcgattctctctagtgtcaatttaggtgg 36720479  T
Q  417 gctaatttagcttctt 432  Q
    |||  |||||||||||    
T  36720480 gctggtttagcttctt 36720495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 432
Target Start/End: Original strand, 4222141 - 4222255
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| |||||||||| | ||||||||| |||||||||| || |||||||||||||| | |||| |   || | |||||||||||||||||| | ||||    
T  4222141 aacccacttgggttggcttagtggtattggcttgggatctgggagtgtgctcctcctcaaagtcttaggttcgattctctctggtgtcaatttaggtgag 4222240  T
Q  418 ctaatttagcttctt 432  Q
     || |||| ||||||    
T  4222241 ttagtttaacttctt 4222255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 432
Target Start/End: Complemental strand, 10445216 - 10445101
Alignment:
Q  319 aacccatttgggttggcctggtggta-ttgacttgggatctggc-gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatga 416  Q
    |||||| |||||||||||| |||| | ||| ||||||| ||||  |||||||||||||||| ||||||   || | |||||||||||  ||||||  ||     
T  10445216 aacccacttgggttggcctagtggcaattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctggtgctaatttgagtgg 10445117  T
Q  417 gctaatttagcttctt 432  Q
    ||||||||||||||||    
T  10445116 gctaatttagcttctt 10445101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 377
Target Start/End: Complemental strand, 31789046 - 31788987
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcga 377  Q
    |||||| |||||||||||| ||| ||||| |||||||||| || ||||||||||||||||    
T  31789046 aacccacttgggttggcctagtgttattggcttgggatctgggagtgtgctcctcctcga 31788987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 357
Target Start/End: Original strand, 203090 - 203128
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatc 357  Q
    |||||| |||||||||||| |||||||||||||||||||    
T  203090 aacccacttgggttggcctagtggtattgacttgggatc 203128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 375
Target Start/End: Original strand, 7975417 - 7975475
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctc 375  Q
    |||||||||| ||||||||| ||||||| | |||||||||| || ||||||||||||||    
T  7975417 aaacccatttaggttggcctagtggtataggcttgggatctgggagtgtgctcctcctc 7975475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 14339610 - 14339676
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctca 384  Q
    |||||| |||| ||||||||||||||||| |||||||| | || |||||||||||||| | ||||||    
T  14339610 aacccagttggattggcctggtggtattggcttgggatttgggagtgtgctcctcctcaatgtctca 14339676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 21960551 - 21960617
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatctg-gcgtgtgctcctcctcgacgtctca 384  Q
    |||||| ||||||||  |||||||||||| ||||||| ||| | |||||||||||||||| ||||||    
T  21960551 aacccaattgggttgcgctggtggtattggcttgggacctgagagtgtgctcctcctcgaggtctca 21960617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 372
Target Start/End: Original strand, 42430335 - 42430388
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatc-tggcgtgtgctcctc 372  Q
    |||||| |||||||||| ||||||||||||||||||||| ||| |||||||||||    
T  42430335 aacccacttgggttggc-tggtggtattgacttgggatcttggagtgtgctcctc 42430388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 375
Target Start/End: Original strand, 46518627 - 46518685
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctc 375  Q
    ||||||| |||||||||| | ||||||||| |||||||||| || ||||||||||||||    
T  46518627 aaacccacttgggttggcatagtggtattggcttgggatctgggagtgtgctcctcctc 46518685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 374
Target Start/End: Original strand, 11612307 - 11612355
Alignment:
Q  327 tgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcct 374  Q
    |||||||||||||||||||| |||||||| || || |||||||||||||    
T  11612307 tgggttggcctggtggtattcacttgggagctgggagtgtgctcctcct 11612355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 355
Target Start/End: Original strand, 17554454 - 17554486
Alignment:
Q  323 catttgggttggcctggtggtattgacttggga 355  Q
    ||||||||||||||||||| |||||||||||||    
T  17554454 catttgggttggcctggtgatattgacttggga 17554486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 425
Target Start/End: Complemental strand, 32651503 - 32651407
Alignment:
Q  330 gttggcctggtggtattgacttgggatctggc-gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagctaattta 425  Q
    |||||||| ||||||||| ||||||| ||||  |||||||||||||| |  ||||| | || | ||||||| |||||||||| |||| |||| ||||    
T  32651503 gttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaagatctcagattcgattctctctagtgtcaatttagatgggctagttta 32651407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 9e-19; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 319 - 426
Target Start/End: Complemental strand, 23361725 - 23361617
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| |||||||| |||||||||||||||||||||| | || |||||||||||||| | ||||||   |||| |||||||||||||||||| | || |    
T  23361725 aacccacttgggttgacctggtggtattgacttgggatatgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgtcaatttaggtggg 23361626  T
Q  418 ctaatttag 426  Q
    |||||||||    
T  23361625 ctaatttag 23361617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 432
Target Start/End: Original strand, 4830486 - 4830601
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatctg-gcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatga 416  Q
    ||||||| |||||||||||||||||||||   |||||||||| | ||||| |||||||||| ||||||   |||||| | |  ||||||||||||||||     
T  4830486 aaacccacttgggttggcctggtggtatttgtttgggatctgagagtgtgttcctcctcgaggtctcaggttcaaatttatacggtgtcaatttggatgg 4830585  T
Q  417 gctaatttagcttctt 432  Q
      ||||||||||||||    
T  4830586 attaatttagcttctt 4830601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 432
Target Start/End: Original strand, 8484998 - 8485113
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatctg-gcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatga 416  Q
    ||||||| |||||||||||||||||||||  ||||||| ||| | ||||||||||| | || |||||||  || | |||||| |||| |||||| | ||     
T  8484998 aaacccacttgggttggcctggtggtatttgcttgggacctgtgagtgtgctcctctttgaggtctcattttcgattctctccggtgccaatttaggtgg 8485097  T
Q  417 gctaatttagcttctt 432  Q
    ||||||||||||||||    
T  8485098 gctaatttagcttctt 8485113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 432
Target Start/End: Complemental strand, 20994534 - 20994419
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcct-cctcgacgtctcatactcaaatctctctggtgtcaatttggatga 416  Q
    |||||| |||||||||||| ||||||||||||||||| || || |||||||||| |||| | ||||||   || | | ||||||||  |||||||||||     
T  20994534 aacccacttgggttggcctagtggtattgacttgggacctgggagtgtgctcctccctcaaagtctcaggatcgattatctctggtaccaatttggatgg 20994435  T
Q  417 gctaatttagcttctt 432  Q
    ||||||||||||||||    
T  20994434 gctaatttagcttctt 20994419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 319 - 432
Target Start/End: Original strand, 968362 - 968476
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| ||| |||||||||||||||||| ||||||| || || |||||||||||||||| ||||||   || | |||||| | || |||||| | || |    
T  968362 aacccacttgagttggcctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctccgatgccaatttaggtggg 968461  T
Q  418 ctaatttagcttctt 432  Q
    |||||||||||||||    
T  968462 ctaatttagcttctt 968476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 362 - 432
Target Start/End: Complemental strand, 14701449 - 14701379
Alignment:
Q  362 gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagctaatttagcttctt 432  Q
    |||||||||| ||| | |||||| | |||| ||||| ||||||||||||||||||||||||||| ||||||    
T  14701449 gtgtgctccttctcaaagtctcagattcaattctctttggtgtcaatttggatgagctaatttaacttctt 14701379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 321 - 429
Target Start/End: Original strand, 2203494 - 2203603
Alignment:
Q  321 cccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagct 419  Q
    |||| |||||||||||| ||||||||| ||||||| || || |||||||||||||| | ||||||   |||| |||| | |||| |||||||| || |||    
T  2203494 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcagggtcaattctccccggtgccaatttgggtgggct 2203593  T
Q  420 aatttagctt 429  Q
    ||||||||||    
T  2203594 aatttagctt 2203603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 32157191 - 32157248
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatc-tggcgtgtgctcctcctc 375  Q
    ||||||||||||||||||||||||||||||||||||| | ||| || |||||||||||    
T  32157191 aacccatttgggttggcctggtggtattgacttgggaccttggagtatgctcctcctc 32157248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 384
Target Start/End: Original strand, 16852339 - 16852406
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctca 384  Q
    ||||||| |||||||||||| ||||||||| ||||||| || || |||||||||||||||| ||||||    
T  16852339 aaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcgaggtctca 16852406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 432
Target Start/End: Original strand, 28783059 - 28783174
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatga 416  Q
    ||||||| |||||||||| ||||||||||| |||| || || || |||||||||||||| | |||||||  || | ||||   |||| |||||||| ||     
T  28783059 aaacccacttgggttggcttggtggtattggcttgagacctgggagtgtgctcctcctcaaggtctcatgttcgattctcctcggtgccaatttgggtgg 28783158  T
Q  417 gctaatttagcttctt 432  Q
    ||||||||||||||||    
T  28783159 gctaatttagcttctt 28783174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 432
Target Start/End: Original strand, 7140725 - 7140822
Alignment:
Q  335 cctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagctaatttagcttctt 432  Q
    ||||||||||||| |||||||||| || ||||||||||||||||  ||||| | || | |||||| ||| ||||||||| || ||||||||| ||||||    
T  7140725 cctggtggtattggcttgggatctgggtgtgtgctcctcctcgagctctcagattcgattctctc-ggtatcaatttgggtgggctaatttaccttctt 7140822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 432
Target Start/End: Original strand, 8059632 - 8059746
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatctg-gcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| ||||||||||||| |||||||||||||| || || | ||||| |||||||| | ||||||   || | |||| ||| ||||||||||  ||||    
T  8059632 aacccacttgggttggcctgatggtattgacttggcatgtgagagtgtgatcctcctcaaggtctcaggttccattctccctgatgtcaatttgagtgag 8059731  T
Q  418 ctaatttagcttctt 432  Q
    ||| |||||||||||    
T  8059732 ctagtttagcttctt 8059746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 432
Target Start/End: Original strand, 11819776 - 11819890
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatctggc-gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    ||||||||||||||| ||| ||||||| | |||||||  |||  |||||||||||||| | ||||||   || | || |||| |||||||||||| || |    
T  11819776 aacccatttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattcactctagtgtcaatttgggtggg 11819875  T
Q  418 ctaatttagcttctt 432  Q
    |||||||||||||||    
T  11819876 ctaatttagcttctt 11819890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 432
Target Start/End: Original strand, 26688865 - 26688979
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatc-tggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| |||||||||||||||||| ||| ||||||| | ||| |||||||||||||| | ||||||   |||  |||  || |||||||||||| || |    
T  26688865 aacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtctcaggttcagttcttcctagtgtcaatttgggtggg 26688964  T
Q  418 ctaatttagcttctt 432  Q
    ||| |||||||||||    
T  26688965 ctagtttagcttctt 26688979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 432
Target Start/End: Original strand, 27750730 - 27750844
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatctggc-gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    ||||||||||||||| ||| ||||||| | |||||||  |||  |||||||||||||| | ||||||   || | || |||| |||||||||||||||      
T  27750730 aacccatttgggttgccctcgtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttggatgga 27750829  T
Q  418 ctaatttagcttctt 432  Q
    |||||||||||||||    
T  27750830 ctaatttagcttctt 27750844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 322 - 410
Target Start/End: Complemental strand, 35690137 - 35690048
Alignment:
Q  322 ccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaattt 410  Q
    ||||||| |||||||| ||||||||| |||||||||| || || ||||||||||| | ||||||   || | ||||||||||||||||||    
T  35690137 ccatttgtgttggcctagtggtattggcttgggatctgggtgtttgctcctcctcaaggtctcaggttcgattctctctggtgtcaattt 35690048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 384
Target Start/End: Original strand, 5801046 - 5801113
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctca 384  Q
    ||||||| |||||||| ||||||||||||  |||||||||| || |||||||||  ||||||||||||    
T  5801046 aaacccacttgggttgacctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctca 5801113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 384
Target Start/End: Complemental strand, 19703564 - 19703497
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatctg-gcgtgtgctcctcctcgacgtctca 384  Q
    ||||||| |||||||||||| ||||||||| ||||||| ||| | |||||||||||||| | ||||||    
T  19703564 aaacccacttgggttggcctagtggtattggcttgggacctgagagtgtgctcctcctcaaggtctca 19703497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 339 - 432
Target Start/End: Original strand, 6536540 - 6536634
Alignment:
Q  339 gtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagctaatttagcttctt 432  Q
    ||||||||| ||||||| || || |||||||||||||| | ||||||   |||| ||||||||||| |||||| | || | ||||||||||||||    
T  6536540 gtggtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgccaatttaggtgggttaatttagcttctt 6536634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 362 - 432
Target Start/End: Complemental strand, 24351760 - 24351690
Alignment:
Q  362 gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagctaatttagcttctt 432  Q
    |||| |||||||| || ||||||   |||| |||||  ||| |||||||||||||||||||||||||||||    
T  24351760 gtgtactcctccttgaggtctcaagttcaattctcttcggtatcaatttggatgagctaatttagcttctt 24351690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 432
Target Start/End: Complemental strand, 30483960 - 30483846
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| |||||||||||  ||||||||| |||||||| | || ||||||||||||||   ||||||   |||| ||||||| ||| ||||||| |||      
T  30483960 aacccacttgggttggcccagtggtattggcttgggatatgggagtgtgctcctcctcagagtctcaggttcaattctctcttgtgccaatttgaatgga 30483861  T
Q  418 ctaatttagcttctt 432  Q
    |||||||| ||||||    
T  30483860 ctaatttatcttctt 30483846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 362 - 432
Target Start/End: Complemental strand, 33727905 - 33727835
Alignment:
Q  362 gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagctaatttagcttctt 432  Q
    |||||||||||||| | ||||||   || | || |||| ||||||||||||||| ||||||||||||||||    
T  33727905 gtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttggatgggctaatttagcttctt 33727835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 384
Target Start/End: Complemental strand, 29858124 - 29858059
Alignment:
Q  320 acccatttgggttggcctggtggtattgacttgggatc-tggcgtgtgctcctcctcgacgtctca 384  Q
    ||||| |||| ||||||||||||||||| ||||||| |  || |||||||||||||||| ||||||    
T  29858124 acccacttggattggcctggtggtattggcttgggaccagggagtgtgctcctcctcgaggtctca 29858059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 315 - 355
Target Start/End: Complemental strand, 22269013 - 22268973
Alignment:
Q  315 accaaacccatttgggttggcctggtggtattgacttggga 355  Q
    |||||||||| |||||||||||||||||| ||| |||||||    
T  22269013 accaaacccacttgggttggcctggtggtgttggcttggga 22268973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 432
Target Start/End: Complemental strand, 43292442 - 43292398
Alignment:
Q  388 tcaaatctctctggtgtcaatttggatgagctaatttagcttctt 432  Q
    |||| |||||| ||||||||||| ||||| |||||||||||||||    
T  43292442 tcaattctctccggtgtcaatttagatgaactaatttagcttctt 43292398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 432
Target Start/End: Original strand, 25931005 - 25931120
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatctg-gcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatga 416  Q
    ||||||||||||||||||||||||||||||  |||||| ||| | ||||| |  ||||||| |||||| | || | ||||| ||||||||||||||||||    
T  25931005 aaacccatttgggttggcctggtggtattggtttgggacctgagagtgtgtttatcctcgaagtctcagattcgattctctttggtgtcaatttggatga 25931104  T
Q  417 gctaatttagcttctt 432  Q
    | |||||||| |||||    
T  25931105 gttaatttagtttctt 25931120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 317 - 432
Target Start/End: Original strand, 37480073 - 37480189
Alignment:
Q  317 caaacccatttgggttggcctggtggtattgacttgggatctg-gcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatg 415  Q
    |||||||| |||||||||||||||||||||| ||||||| ||| | |||||||||||||| | ||||||   || | |||| | |||  |||||||| ||    
T  37480073 caaacccacttgggttggcctggtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctccccggtcccaatttgggtg 37480172  T
Q  416 agctaatttagcttctt 432  Q
     ||||||||||||||||    
T  37480173 ggctaatttagcttctt 37480189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 384
Target Start/End: Original strand, 39714991 - 39715058
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctca 384  Q
    ||||||| |||||||||| ||||||||||||||||||| || || |||||||||||||||| ||||||    
T  39714991 aaacccacttgggttggcatggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctca 39715058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 432
Target Start/End: Complemental strand, 21195753 - 21195638
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatctggc-gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatga 416  Q
    |||||||||||||||| ||| ||||||| | ||||| |  |||  |||||||||||||| | ||||||   || | || |||| |||||||||||||||     
T  21195753 aaacccatttgggttgccctagtggtataggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttggatgg 21195654  T
Q  417 gctaatttagcttctt 432  Q
    ||||||||||||||||    
T  21195653 gctaatttagcttctt 21195638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 384
Target Start/End: Complemental strand, 34041665 - 34041598
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatctg-gcgtgtgctcctcctcgacgtctca 384  Q
    ||||||| |||||||||||| ||||||||||||| ||||||| | |||||||||||||| | ||||||    
T  34041665 aaacccacttgggttggcctagtggtattgacttaggatctgagagtgtgctcctcctcaaggtctca 34041598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 319 - 425
Target Start/End: Original strand, 41202250 - 41202357
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||| ||||||||||| |||||||||||||| || ||||| || || ||||||||||||| |||| |   |||| | |||||| ||||||||||||||      
T  41202250 aacctatttgggttggtctggtggtattgacctgagatctgggagtatgctcctcctcgaagtcttaggttcaattttctctgatgtcaatttggatgga 41202349  T
Q  418 ctaattta 425  Q
    ||||||||    
T  41202350 ctaattta 41202357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 432
Target Start/End: Original strand, 1435064 - 1435177
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| |||||||||| | |||||| || |||||||| | || ||||||| |||||| | ||||||   || | |||||||||||||||||||| || |    
T  1435064 aacccacttgggttggcatagtggtactggcttgggatttaggagtgtgcttctcctcaaggtctcagt-tcgattctctctggtgtcaatttgggtggg 1435162  T
Q  418 ctaatttagcttctt 432  Q
    |||||||||||||||    
T  1435163 ctaatttagcttctt 1435177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 385
Target Start/End: Complemental strand, 29197455 - 29197385
Alignment:
Q  316 ccaaacccatttgggttggcctggtggtattgacttggga-tctggcgtgtgctcctcctcgacgtctcat 385  Q
    ||||||||| |||||||||| ||||||||||||||||||| |  || ||||||||||||| || |||||||    
T  29197455 ccaaacccacttgggttggcttggtggtattgacttgggacttgggagtgtgctcctccttgatgtctcat 29197385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 432
Target Start/End: Complemental strand, 42327471 - 42327357
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| |||||||||||| ||||||||| ||||||| || || |||||||||||||| | ||||||   || | |||||  |||| |||||||| || |    
T  42327471 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctcttcggtgccaatttgggtggg 42327372  T
Q  418 ctaatttagcttctt 432  Q
    |||||||||| ||||    
T  42327371 ctaatttagcatctt 42327357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 432
Target Start/End: Complemental strand, 23230681 - 23230567
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatctggc-gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatga 416  Q
    ||||||| ||||||||| | | ||||||||| |||||| ||||  |||||||||||||| | ||  ||   |||| ||||||  ||||||||||||||||    
T  23230681 aaacccaattgggttggtcag-tggtattgatttgggaactgggagtgtgctcctcctcaaagttccaggttcaattctctccagtgtcaatttggatga 23230583  T
Q  417 gctaatttagcttctt 432  Q
    ||||||||| ||||||    
T  23230582 gctaatttaacttctt 23230567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 374
Target Start/End: Original strand, 3001386 - 3001435
Alignment:
Q  326 ttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcct 374  Q
    |||||||||||| |||||||||||||| ||||| || |||||||||||||    
T  3001386 ttgggttggcctagtggtattgacttgagatctaggagtgtgctcctcct 3001435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 4439055 - 4438998
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatctg-gcgtgtgctcctcctc 375  Q
    |||||| ||||||||||||  ||||||| |||||||||||| | ||||||||||||||    
T  4439055 aacccacttgggttggcctaatggtattaacttgggatctgagagtgtgctcctcctc 4438998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 431
Target Start/End: Original strand, 19244109 - 19244222
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatctg-gcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| ||||||||| ||  |||||||||||||||| ||| | |||||||||||| | | ||||||   || | ||||||||||| |||||||  || |    
T  19244109 aacccacttgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcaggttcgattctctctggtgccaatttgagtggg 19244208  T
Q  418 ctaatttagcttct 431  Q
    ||||||||| ||||    
T  19244209 ctaatttagtttct 19244222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 432
Target Start/End: Complemental strand, 37756046 - 37755933
Alignment:
Q  320 acccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagc 418  Q
    ||||| |||||||||| ||||||||||| ||||||| || ||  ||||||||| ||||| ||||||   || | || ||||| || |||||||  || ||    
T  37756046 acccacttgggttggcttggtggtattggcttgggacctgggaatgtgctcctactcgaggtctcaagttcgactccctctgatgccaatttgagtgggc 37755947  T
Q  419 taatttagcttctt 432  Q
    ||||||||||||||    
T  37755946 taatttagcttctt 37755933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 377
Target Start/End: Complemental strand, 7799112 - 7799052
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttggga-tctggcgtgtgctcctcctcga 377  Q
    ||||||| |||||||| ||||||||||||| ||||||| |  || ||||||||||||||||    
T  7799112 aaacccacttgggttgtcctggtggtattggcttgggacttgggagtgtgctcctcctcga 7799052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 432
Target Start/End: Complemental strand, 11128001 - 11127965
Alignment:
Q  396 ctctggtgtcaatttggatgagctaatttagcttctt 432  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  11128001 ctctggtgtcaatttagatgtgctaatttagcttctt 11127965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 320 - 375
Target Start/End: Complemental strand, 16918653 - 16918597
Alignment:
Q  320 acccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctc 375  Q
    ||||| |||||||||||| |||||||||  ||||||||| || ||||||||||||||    
T  16918653 acccacttgggttggcctagtggtattggtttgggatctgggagtgtgctcctcctc 16918597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 374
Target Start/End: Original strand, 18259730 - 18259786
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatctg-gcgtgtgctcctcct 374  Q
    |||||||||| |||||||||||||||||| |||| ||| || | |||||||||||||    
T  18259730 aacccatttgagttggcctggtggtattggcttgagatttgagagtgtgctcctcct 18259786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 355
Target Start/End: Original strand, 32106566 - 32106602
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttggga 355  Q
    |||||| |||||||||||||||||| |||||||||||    
T  32106566 aacccacttgggttggcctggtggtgttgacttggga 32106602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 432
Target Start/End: Complemental strand, 41709 - 41595
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatctg-gcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| |||||||||||| ||||||||| |||| |||||| | || ||||||||||||| ||||||   |||| |||||||| ||||||||||| || |    
T  41709 aacccacttgggttggcctagtggtattggcttgagatctgagagtatgctcctcctcgaggtctcaggttcaattctctctgatgtcaatttgggtggg 41610  T
Q  418 ctaatttagcttctt 432  Q
    |||||||||| ||||    
T  41609 ctaatttagcctctt 41595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 432
Target Start/End: Original strand, 15137553 - 15137667
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| ||||||||||||||||||| ||||||||||| | || |||||||||||||| | ||||||   |  | |||||||||||||||||||| || |    
T  15137553 aacccacttgggttggcctggtggtactgacttgggatttaggagtgtgctcctcctcaaggtctcaggttagattctctctggtgtcaatttgggtggg 15137652  T
Q  418 ctaatttagcttctt 432  Q
    ||||||||| |||||    
T  15137653 ctaatttagtttctt 15137667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 360
Target Start/End: Original strand, 35119381 - 35119424
Alignment:
Q  317 caaacccatttgggttggcctggtggtattgacttgggatctgg 360  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  35119381 caaacccatttgggttggcctagtggtattgacttgggatctgg 35119424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 384
Target Start/End: Complemental strand, 45709785 - 45709718
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatctg-gcgtgtgctcctcctcgacgtctca 384  Q
    |||||||||||||||||||| ||||||||  ||||||||||| | |||||||||||||||| ||||||    
T  45709785 aaacccatttgggttggcctagtggtattagcttgggatctgagagtgtgctcctcctcgaggtctca 45709718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 326 - 432
Target Start/End: Complemental strand, 41519333 - 41519227
Alignment:
Q  326 ttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagctaattt 424  Q
    |||||||||||| |||||||||||||||||| | || |||||||||||||| | ||||||   ||   ||||||| |||||||||| | || ||||||||    
T  41519333 ttgggttggcctagtggtattgacttgggatttaggagtgtgctcctcctcaaggtctcaggttcgcttctctct-gtgtcaatttaggtgggctaattt 41519235  T
Q  425 agcttctt 432  Q
    ||||||||    
T  41519234 agcttctt 41519227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 326 - 432
Target Start/End: Complemental strand, 43663164 - 43663057
Alignment:
Q  326 ttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagctaattt 424  Q
    ||||||||||||| |||||||||||||||| || || | ||| ||||||||||  |||||   || |||||||| ||| ||||||||| ||  |||||||    
T  43663164 ttgggttggcctgatggtattgacttgggacctaggagcgtggtcctcctcgagatctcaggttcgaatctctccggtatcaatttgggtggactaattt 43663065  T
Q  425 agcttctt 432  Q
    ||||||||    
T  43663064 agcttctt 43663057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 22760863 - 22760929
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctca 384  Q
    |||||| ||||||||| |||||||||||||||||||| || || |||||||||||||| | ||||||    
T  22760863 aacccacttgggttggtctggtggtattgacttgggacctgggagtgtgctcctcctcaaggtctca 22760929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 384
Target Start/End: Complemental strand, 23301678 - 23301612
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttggga-tctggcgtgtgctcctcctcgacgtctca 384  Q
    |||||| |||||||||||||||||||||||||||||| |  || ||||||||||||| || ||||||    
T  23301678 aacccacttgggttggcctggtggtattgacttgggacttgggagtgtgctcctccttgaggtctca 23301612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 432
Target Start/End: Complemental strand, 26459486 - 26459372
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| |||||||||||| ||||||||| ||||||| || || |||||||||||||| | ||||||   || | ||||||||||| ||||||| | | |    
T  26459486 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgaagggg 26459387  T
Q  418 ctaatttagcttctt 432  Q
     || |||||||||||    
T  26459386 ttagtttagcttctt 26459372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 48771938 - 48772004
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctca 384  Q
    |||||| |||||||||| ||||||||||| |||||||||| || ||||||||||||| || ||||||    
T  48771938 aacccacttgggttggcttggtggtattggcttgggatctgggagtgtgctcctccttgaggtctca 48772004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 386
Target Start/End: Complemental strand, 25021411 - 25021343
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcata 386  Q
    |||||| |||||||||||| ||||||||| ||||||| || || |||||||||||||| | ||||||||    
T  25021411 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctcata 25021343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 358
Target Start/End: Original strand, 4161288 - 4161327
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct 358  Q
    |||||||||||||||| |||||||||||| ||||||||||    
T  4161288 aacccatttgggttggtctggtggtattggcttgggatct 4161327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 432
Target Start/End: Original strand, 7721372 - 7721483
Alignment:
Q  322 ccatttgggttggcctggtggtattgacttgggatctggc-gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagcta 420  Q
    ||||||||| ||| |  |||||||||  |||||| ||||  |||| ||||||||| | |||||||  || | |||||||||||||||||||||||   ||    
T  7721372 ccatttggggtggtcaagtggtattggtttgggacctgggagtgtactcctcctcaaggtctcatgttcgattctctctggtgtcaatttggatggaata 7721471  T
Q  421 atttagcttctt 432  Q
    ||||||||||||    
T  7721472 atttagcttctt 7721483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 384
Target Start/End: Original strand, 23552117 - 23552184
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctca 384  Q
    ||||||| |||||||||||| ||| ||||||||||||| || || |||||||||||||| | ||||||    
T  23552117 aaacccacttgggttggcctagtgctattgacttgggacctgggagtgtgctcctcctcaaggtctca 23552184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 432
Target Start/End: Complemental strand, 24438248 - 24438209
Alignment:
Q  393 tctctctggtgtcaatttggatgagctaatttagcttctt 432  Q
    ||||||||||||||||||| ||| ||||||||||||||||    
T  24438248 tctctctggtgtcaatttgaatgggctaatttagcttctt 24438209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 372
Target Start/End: Original strand, 7801180 - 7801234
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctc 372  Q
    |||||| |||| ||||||||||||||||||||||||| || || |||||||||||    
T  7801180 aacccacttggtttggcctggtggtattgacttgggacctgggagtgtgctcctc 7801234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 432
Target Start/End: Complemental strand, 20335907 - 20335793
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatctggc-gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| ||||||||| || | ||||||| |||||||  |||  |||||||||||||||| ||||||   || | |||| | | |||||||||||||| |    
T  20335907 aacccacttgggttggtctagaggtattggcttgggacttgggagtgtgctcctcctcgaggtctcaggttcgattctcaccgatgtcaatttggatggg 20335808  T
Q  418 ctaatttagcttctt 432  Q
    |||||||| ||||||    
T  20335807 ctaatttaacttctt 20335793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 375
Target Start/End: Original strand, 23595736 - 23595786
Alignment:
Q  326 ttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctc 375  Q
    ||||||||| ||||||||||||||||| ||||| || ||||||||||||||    
T  23595736 ttgggttggtctggtggtattgacttgagatctcggagtgtgctcctcctc 23595786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 432
Target Start/End: Original strand, 25590611 - 25590725
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatctggc-gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| |||||||| |||| |||||||| |||| |||||||  |||||||||||||||| |||||    || | | |||  ||||||||||||  || |    
T  25590611 aacccacttgggttgacctgttggtattggcttgagatctgggagtgtgctcctcctcgaggtctcgggttcgattttcttcggtgtcaatttgagtggg 25590710  T
Q  418 ctaatttagcttctt 432  Q
    |||||||||||||||    
T  25590711 ctaatttagcttctt 25590725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 372
Target Start/End: Complemental strand, 25956368 - 25956314
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatc-tggcgtgtgctcctc 372  Q
    ||||||||||||||||||| ||||||||| ||||||| | ||| |||||||||||    
T  25956368 aacccatttgggttggcctagtggtattggcttgggaccttggagtgtgctcctc 25956314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 375
Target Start/End: Original strand, 26526289 - 26526347
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatctg-gcgtgtgctcctcctc 375  Q
    |||||||||||| |||| |||||||||||||||| |||| || | ||||||||||||||    
T  26526289 aaacccatttggattggtctggtggtattgacttaggatttgagagtgtgctcctcctc 26526347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 43590907 - 43590973
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttggga-tctggcgtgtgctcctcctcgacgtctca 384  Q
    |||||| |||||||||||||||||||||| ||||||| |  || |||||||||||||| | ||||||    
T  43590907 aacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcaatgtctca 43590973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 355
Target Start/End: Original strand, 41487361 - 41487398
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttggga 355  Q
    ||||||| |||||||||||||||||||||| |||||||    
T  41487361 aaacccacttgggttggcctggtggtattggcttggga 41487398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 321 - 384
Target Start/End: Original strand, 21854550 - 21854614
Alignment:
Q  321 cccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctca 384  Q
    |||| ||||||||||||| |||||||| || ||||||| || |||||||||||||| | ||||||    
T  21854550 cccacttgggttggcctgatggtattggctagggatctgggagtgtgctcctcctcaaagtctca 21854614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 345 - 432
Target Start/End: Complemental strand, 42262145 - 42262057
Alignment:
Q  345 ttgacttgggatctg-gcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagctaatttagcttctt 432  Q
    ||||||||||||||| | |||||||||||||  | |||||| | |||| ||||||| ||| ||| ||||||| | ||||||| ||||||    
T  42262145 ttgacttgggatctgagagtgtgctcctcctaaaggtctcagattcaattctctcttgtgccaaattggatgggttaatttaccttctt 42262057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 432
Target Start/End: Complemental strand, 48582843 - 48582799
Alignment:
Q  388 tcaaatctctctggtgtcaatttggatgagctaatttagcttctt 432  Q
    |||| |||||||| || |||||||| |||||||||||||||||||    
T  48582843 tcaactctctctgatgccaatttgggtgagctaatttagcttctt 48582799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 432
Target Start/End: Original strand, 28635696 - 28635810
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| |||||||| |||||||||| ||||||||||||| || ||||||||||||| || |||| |   || | ||||||||||| |||||||| || |    
T  28635696 aacccacttgggttgtcctggtggtactgacttgggatctgggagtgtgctcctcctggaggtcttaggttcgattctctctggtgccaatttgggtggg 28635795  T
Q  418 ctaatttagcttctt 432  Q
    |||||||||||||||    
T  28635796 ctaatttagcttctt 28635810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 319 - 432
Target Start/End: Original strand, 13496241 - 13496355
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatctg-gcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| |||||||||| |||||||||||||||||||  || | ||||| ||||| |||| ||||| |  || | ||| ||||||  |||||||||||||    
T  13496241 aacccacttgggttggcatggtggtattgacttgggacatgtgagtgtgttcctcttcgaggtctcgtgttcgattctttctggtaacaatttggatgag 13496340  T
Q  418 ctaatttagcttctt 432  Q
    |||||||||||||||    
T  13496341 ctaatttagcttctt 13496355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 432
Target Start/End: Complemental strand, 7949531 - 7949416
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatga 416  Q
    ||||||| ||||| |||||| | ||||||| ||||||| || || |||||||||||||| | ||||||   || | |||||||||||||||||| | ||     
T  7949531 aaacccacttgggctggcctagcggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaatttaggtgg 7949432  T
Q  417 gctaatttagcttctt 432  Q
    ||||||||||||||||    
T  7949431 gctaatttagcttctt 7949416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 432
Target Start/End: Complemental strand, 51250599 - 51250484
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatga 416  Q
    ||||||| |||||||||||||||||||||| |||||||||| || ||||||||| |||| |  |||||   || | || ||| |||| |||||||| ||     
T  51250599 aaacccacttgggttggcctggtggtattggcttgggatctgggagtgtgctccgcctcaagatctcaagttcgattccctccggtgccaatttgggtgg 51250500  T
Q  417 gctaatttagcttctt 432  Q
    ||||||||||||||||    
T  51250499 gctaatttagcttctt 51250484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 47044717 - 47044783
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatctg-gcgtgtgctcctcctcgacgtctca 384  Q
    |||||| |||| ||||||||||||||||||||||||||||| | || ||||||||||||| ||||||    
T  47044717 aacccacttggattggcctggtggtattgacttgggatctgagagtttgctcctcctcgaggtctca 47044783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 319 - 432
Target Start/End: Original strand, 51948480 - 51948594
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| |||||||| |||||| ||||||||||||||||| || |||||| ||||||||| ||||||   |||| ||||||  ||||||||||  |||      
T  51948480 aacccacttgggttgtcctggtagtattgacttgggatctaggagtgtgcccctcctcgaggtctcaggttcaattctctccagtgtcaatttaaatgga 51948579  T
Q  418 ctaatttagcttctt 432  Q
    |||||||| ||||||    
T  51948580 ctaatttaacttctt 51948594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 382
Target Start/End: Complemental strand, 9241101 - 9241037
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatctgg-cgtgtgctcctcctcgacgtct 382  Q
    |||||| |||||||||||||||||||||| ||||||||||||  |||||||||| ||||| ||||    
T  9241101 aacccacttgggttggcctggtggtattggcttgggatctggtagtgtgctcctgctcgaggtct 9241037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 429
Target Start/End: Complemental strand, 19229283 - 19229173
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatctggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagc 418  Q
    ||||||||||||||||||||||||||||| | |||||  | |  ||||||||||||||| ||||||   || | |||| |||||  |||||||| || ||    
T  19229283 aacccatttgggttggcctggtggtattggcctgggacttagaatgtgctcctcctcgaggtctcaggttcgattctccctggtaccaatttgggtgggc 19229184  T
Q  419 taatttagctt 429  Q
    | |||||||||    
T  19229183 ttatttagctt 19229173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 319 - 383
Target Start/End: Complemental strand, 19238653 - 19238588
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttggga-tctggcgtgtgctcctcctcgacgtctc 383  Q
    |||||| |||||||||||||||||||||| ||||||| |  || |||||||||||||||| |||||    
T  19238653 aacccacttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcgaggtctc 19238588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 319 - 411
Target Start/End: Complemental strand, 37109427 - 37109334
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttg 411  Q
    |||||| |||||||||||| ||||||||| ||||||| || || |||||||||||||| | ||||||   || | ||||||||||| |||||||    
T  37109427 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttg 37109334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 384
Target Start/End: Complemental strand, 21660213 - 21660154
Alignment:
Q  326 ttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctca 384  Q
    ||||||||| ||||||||||||||||| ||||| || |||||||| ||||||| ||||||    
T  21660213 ttgggttggtctggtggtattgacttgagatctgggagtgtgctcttcctcgaggtctca 21660154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 384
Target Start/End: Complemental strand, 21668977 - 21668918
Alignment:
Q  326 ttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctca 384  Q
    ||||||||| ||||||||||||||||| ||||| || |||||||| ||||||| ||||||    
T  21668977 ttgggttggtctggtggtattgacttgagatctgggagtgtgctcttcctcgaggtctca 21668918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 360
Target Start/End: Complemental strand, 27965588 - 27965545
Alignment:
Q  317 caaacccatttgggttggcctggtggtattgacttgggatctgg 360  Q
    |||||||| |||||||||||| ||||||||| ||||||||||||    
T  27965588 caaacccacttgggttggcctagtggtattggcttgggatctgg 27965545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 429
Target Start/End: Complemental strand, 55427276 - 55427165
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| |||||||||||||||||||||| ||||||| || || || ||||||| ||||| ||||||   || | ||||   |||| |||||||| || |    
T  55427276 aacccacttgggttggcctggtggtattggcttgggacctgggagtctgctcctgctcgaggtctcaggttcgattctccgcggtgccaatttgggtggg 55427177  T
Q  418 ctaatttagctt 429  Q
    ||||||||||||    
T  55427176 ctaatttagctt 55427165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 426
Target Start/End: Original strand, 46545711 - 46545819
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatctg-gcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| |||||||||||| ||||||||| |||| || ||| | |||||||||||||| |  ||||| | || | | |||||| ||||||||| ||||      
T  46545711 aacccacttgggttggcctagtggtattggcttgagacctgagagtgtgctcctcctcaagatctcagattcgattttctctgatgtcaatttagatgga 46545810  T
Q  418 ctaatttag 426  Q
    |||||||||    
T  46545811 ctaatttag 46545819  T

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Target: chr6 (Bit Score: 44; Significance: 8e-16; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 319 - 377
Target Start/End: Complemental strand, 24641266 - 24641207
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcga 377  Q
    ||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||    
T  24641266 aacccatttgggttggcttggtggtattgacttgggatctgggagtgtgctcctcctcga 24641207  T

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Target: chr6; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 318 - 432
Target Start/End: Complemental strand, 31623068 - 31622953
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatctggc-gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatga 416  Q
    ||||||| ||||||||| | |||||||||| ||||||| ||||  |||||||||||||||| ||||||   |  |||| ||| ||||||||||||| ||     
T  31623068 aaacccacttgggttggtccggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggtttgaatcactccggtgtcaatttgggtgg 31622969  T
Q  417 gctaatttagcttctt 432  Q
    ||||||||||||||||    
T  31622968 gctaatttagcttctt 31622953  T

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Target: chr6; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 318 - 432
Target Start/End: Original strand, 33549103 - 33549218
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatga 416  Q
    ||||||| ||||||||| |||||||||||| ||||||| || || |||||||||||||||| ||||||   || | |||||| | || |||||| | |||    
T  33549103 aaacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaatttaggtga 33549202  T
Q  417 gctaatttagcttctt 432  Q
    ||||||||||||||||    
T  33549203 gctaatttagcttctt 33549218  T

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Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 326 - 415
Target Start/End: Complemental strand, 6776676 - 6776586
Alignment:
Q  326 ttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatg 415  Q
    |||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||   |  | |||||||||| ||||||||||||    
T  6776676 ttgggttggcctggtggtattggcttgggatctgggggtgtgctcctcctcgatgtctcaagtttgattctctctggtttcaatttggatg 6776586  T

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Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 432
Target Start/End: Complemental strand, 12234584 - 12234469
Alignment:
Q  318 aaacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatga 416  Q
    ||||||| || ||||||||||||||||||||||||||| || || |||||||||  ||||| ||||||   || | ||||||  |||||||||| ||||     
T  12234584 aaacccacttaggttggcctggtggtattgacttgggacctgggagtgtgctccctctcgaggtctcaggttcgattctctccagtgtcaatttagatgg 12234485  T
Q  417 gctaatttagcttctt 432  Q
    | ||||||||||||||    
T  12234484 gataatttagcttctt 12234469  T

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Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 320 - 432
Target Start/End: Complemental strand, 6758497 - 6758384
Alignment:
Q  320 acccatttgggttggcctggtggtattgacttgggatctggc-gtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagc 418  Q
    ||||| ||| |||||||||||||||||| ||| |||| |||  ||||||||| |||||| ||||||   || | |||||||||||||||||| | || ||    
T  6758497 acccacttgtgttggcctggtggtattggcttaggatttgggagtgtgctccacctcgaggtctcaagatcgattctctctggtgtcaatttaggtgggc 6758398  T
Q  419 taatttagcttctt 432  Q
     |||||||||||||    
T  6758397 aaatttagcttctt 6758384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 425
Target Start/End: Original strand, 28363948 - 28364044
Alignment:
Q  330 gttggcctggtggtattgacttgggatctg-gcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgagctaattta 425  Q
    |||||| | |||||||||  |||||||||| | |||||||||||||| | |||||| | || | | ||||||||||||||||||||| |||||||||    
T  28363948 gttggcatagtggtattggtttgggatctgcgagtgtgctcctcctcaaggtctcagattcgattatctctggtgtcaatttggatgggctaattta 28364044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 375
Target Start/End: Complemental strand, 12188381 - 12188322
Alignment:
Q  317 caaacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctc 375  Q
    |||||||| |||||||||||| ||||||||| ||||||| || || ||||||||||||||    
T  12188381 caaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctc 12188322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 32613214 - 32613175
Alignment:
Q  321 cccatttgggttggcctggtggtattgacttgggatctgg 360  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  32613214 cccacttgggttggcctggtggtattgacttggggtctgg 32613175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 339 - 385
Target Start/End: Original strand, 346551 - 346597
Alignment:
Q  339 gtggtattgacttgggatctggcgtgtgctcctcctcgacgtctcat 385  Q
    ||||||||||||||||| |||| ||||||| |||||||| |||||||    
T  346551 gtggtattgacttgggacctggagtgtgcttctcctcgaggtctcat 346597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 21418470 - 21418536
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttggga-tctggcgtgtgctcctcctcgacgtctca 384  Q
    |||||| |||||||||||||||||||||| ||||||| |  || |||||||||||||| | ||||||    
T  21418470 aacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctccatgtctca 21418536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 30127400 - 30127466
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctca 384  Q
    |||||| ||||||||| |||||||||||| |||||| ||| || ||||||||||| |||| ||||||    
T  30127400 aacccacttgggttggtctggtggtattggcttggggtctgggagtgtgctcctcttcgaggtctca 30127466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Original strand, 31282523 - 31282556
Alignment:
Q  399 tggtgtcaatttggatgagctaatttagcttctt 432  Q
    |||||||||||||| |||||||||||||||||||    
T  31282523 tggtgtcaatttgggtgagctaatttagcttctt 31282556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 355
Target Start/End: Original strand, 34444810 - 34444839
Alignment:
Q  326 ttgggttggcctggtggtattgacttggga 355  Q
    ||||||||||||||||||||||||||||||    
T  34444810 ttgggttggcctggtggtattgacttggga 34444839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 355
Target Start/End: Original strand, 28028530 - 28028566
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttggga 355  Q
    |||||| |||||||||||||||||| |||||||||||    
T  28028530 aacccacttgggttggcctggtggtgttgacttggga 28028566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 374
Target Start/End: Complemental strand, 32201961 - 32201905
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcct 374  Q
    ||||||||||||||| | ||||||||||| ||||||||||  | |||||||||||||    
T  32201961 aacccatttgggttgacttggtggtattggcttgggatctcagagtgtgctcctcct 32201905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 326 - 358
Target Start/End: Complemental strand, 33932014 - 33931982
Alignment:
Q  326 ttgggttggcctggtggtattgacttgggatct 358  Q
    |||||||| ||||||||||||||||||||||||    
T  33932014 ttgggttgacctggtggtattgacttgggatct 33931982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 414
Target Start/End: Original strand, 11535 - 11624
Alignment:
Q  326 ttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggat 414  Q
    ||||| |||||||||||||||| |||||||||| || |||||||||||||||| ||||||   || | |||||||||||| |||||||||    
T  11535 ttgggatggcctggtggtattggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctctctggtgttaatttggat 11624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 319 - 432
Target Start/End: Complemental strand, 15399 - 15285
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctcatactcaaatctctctggtgtcaatttggatgag 417  Q
    |||||| ||||||||| |||||||||||| ||||||| || || |||||||||||||||| ||||||   || | |||||| | || |||||| | || |    
T  15399 aacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaatttaggtggg 15300  T
Q  418 ctaatttagcttctt 432  Q
    |||||||||||||||    
T  15299 ctaatttagcttctt 15285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 319 - 352
Target Start/End: Complemental strand, 12498 - 12465
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttg 352  Q
    ||||||||||||||||||||||||||||||||||    
T  12498 aacccatttgggttggcctggtggtattgacttg 12465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 319 - 352
Target Start/End: Complemental strand, 22826 - 22793
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttg 352  Q
    ||||||||||||||||||||||||||||||||||    
T  22826 aacccatttgggttggcctggtggtattgacttg 22793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 384
Target Start/End: Complemental strand, 909 - 850
Alignment:
Q  326 ttgggttggcctggtggtattgacttgggatct-ggcgtgtgctcctcctcgacgtctca 384  Q
    ||||| |||||||||||||||| |||||||||| ||  ||||||||||||||| ||||||    
T  909 ttggggtggcctggtggtattggcttgggatctgggaatgtgctcctcctcgaagtctca 850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 432
Target Start/End: Complemental strand, 25346 - 25309
Alignment:
Q  395 tctctggtgtcaatttggatgagctaatttagcttctt 432  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  25346 tctctggtgtcaatttgaatgagctattttagcttctt 25309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 360
Target Start/End: Complemental strand, 42596 - 42555
Alignment:
Q  319 aacccatttgggttggcctggtggtattgacttgggatctgg 360  Q
    |||||| |||||||||||| ||||||||||||||| ||||||    
T  42596 aacccagttgggttggcctagtggtattgacttggaatctgg 42555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 10216 - 10260
Alignment:
Q  316 ccaaacccatttgggttggcctggtggtattgacttgggatctgg 360  Q
    ||||||||| ||||||||||||| || ||||| ||||||||||||    
T  10216 ccaaacccacttgggttggcctgatgatattggcttgggatctgg 10260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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