View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17015_low_16 (Length: 327)

Name: NF17015_low_16
Description: NF17015
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17015_low_16
NF17015_low_16
[»] chr4 (25 HSPs)
chr4 (3-308)||(9561148-9561455)
chr4 (3-131)||(34986296-34986424)
chr4 (3-133)||(2847994-2848123)
chr4 (17-129)||(9561024-9561136)
chr4 (3-131)||(20588128-20588256)
chr4 (60-142)||(810233-810315)
chr4 (52-133)||(9561582-9561663)
chr4 (52-129)||(55780302-55780379)
chr4 (52-129)||(55844482-55844559)
chr4 (53-138)||(20588040-20588124)
chr4 (53-129)||(2847906-2847982)
chr4 (55-90)||(808744-808779)
chr4 (55-90)||(809115-809150)
chr4 (55-90)||(809486-809521)
chr4 (55-90)||(809656-809691)
chr4 (55-90)||(810027-810062)
chr4 (55-90)||(54754360-54754395)
chr4 (55-90)||(808945-808980)
chr4 (55-90)||(809316-809351)
chr4 (55-90)||(54756725-54756760)
chr4 (55-90)||(54756926-54756961)
chr4 (55-90)||(54757529-54757564)
chr4 (55-90)||(54757730-54757765)
chr4 (99-133)||(54756341-54756375)
chr4 (64-128)||(1701131-1701195)
[»] scaffold0065 (5 HSPs)
scaffold0065 (3-308)||(229-539)
scaffold0065 (15-129)||(681-795)
scaffold0065 (52-133)||(21-102)
scaffold0065 (3-129)||(551-669)
scaffold0065 (53-129)||(790-865)
[»] chr6 (16 HSPs)
chr6 (3-308)||(18762728-18763036)
chr6 (15-129)||(18762602-18762716)
chr6 (10-131)||(7851393-7851511)
chr6 (15-129)||(18762493-18762607)
chr6 (3-129)||(32556400-32556527)
chr6 (52-126)||(28123068-28123142)
chr6 (58-134)||(32556535-32556611)
chr6 (59-133)||(28122930-28123004)
chr6 (53-129)||(18762422-18762498)
chr6 (55-90)||(22038107-22038142)
chr6 (55-129)||(28123305-28123379)
chr6 (55-129)||(28123504-28123578)
chr6 (56-129)||(7851530-7851603)
chr6 (55-130)||(15034003-15034078)
chr6 (60-90)||(22038313-22038343)
chr6 (99-133)||(22038653-22038687)
[»] chr7 (19 HSPs)
chr7 (15-308)||(10563975-10564271)
chr7 (15-234)||(12283179-12283400)
chr7 (3-133)||(45402754-45402884)
chr7 (3-123)||(6797269-6797389)
chr7 (15-129)||(12283395-12283509)
chr7 (15-129)||(12283504-12283618)
chr7 (18-116)||(21405929-21406027)
chr7 (50-133)||(12283079-12283162)
chr7 (39-130)||(10564457-10564548)
chr7 (39-129)||(10564266-10564356)
chr7 (39-128)||(10564554-10564643)
chr7 (53-129)||(45402666-45402742)
chr7 (52-130)||(10563830-10563908)
chr7 (39-92)||(10564399-10564452)
chr7 (53-129)||(6797182-6797257)
chr7 (53-130)||(10564648-10564725)
chr7 (55-90)||(4721019-4721054)
chr7 (55-129)||(13420428-13420502)
chr7 (55-90)||(13420629-13420664)
[»] scaffold0050 (7 HSPs)
scaffold0050 (15-308)||(16192-16487)
scaffold0050 (34-130)||(22584-22680)
scaffold0050 (24-124)||(22770-22870)
scaffold0050 (38-129)||(16106-16197)
scaffold0050 (35-89)||(22877-22931)
scaffold0050 (34-130)||(22680-22780)
scaffold0050 (52-130)||(16511-16589)
[»] scaffold0104 (5 HSPs)
scaffold0104 (15-142)||(39207-39334)
scaffold0104 (52-133)||(39473-39554)
scaffold0104 (52-133)||(39850-39931)
scaffold0104 (55-127)||(39112-39184)
scaffold0104 (55-129)||(38883-38957)
[»] chr2 (21 HSPs)
chr2 (3-131)||(24024508-24024636)
chr2 (46-136)||(30771400-30771490)
chr2 (17-109)||(30771316-30771409)
chr2 (52-133)||(28048244-28048325)
chr2 (7-83)||(28056102-28056178)
chr2 (55-129)||(28056194-28056268)
chr2 (55-90)||(21173668-21173703)
chr2 (55-90)||(27970572-27970607)
chr2 (55-90)||(44348258-44348293)
chr2 (55-90)||(44350782-44350817)
chr2 (55-90)||(21173498-21173533)
chr2 (60-90)||(27970371-27970401)
chr2 (55-89)||(27970743-27970777)
chr2 (99-133)||(28056532-28056566)
chr2 (60-90)||(28056876-28056906)
chr2 (60-90)||(30767584-30767614)
chr2 (60-90)||(30771747-30771777)
chr2 (60-90)||(44348464-44348494)
chr2 (99-133)||(44348804-44348838)
chr2 (55-88)||(27970203-27970236)
chr2 (55-88)||(28056708-28056741)
[»] scaffold0019 (3 HSPs)
scaffold0019 (15-138)||(168509-168632)
scaffold0019 (52-133)||(168320-168401)
scaffold0019 (55-128)||(168654-168727)
[»] scaffold0460 (2 HSPs)
scaffold0460 (3-131)||(1658-1786)
scaffold0460 (53-129)||(1798-1874)
[»] scaffold0069 (2 HSPs)
scaffold0069 (3-131)||(51413-51541)
scaffold0069 (53-129)||(51553-51629)
[»] chr5 (15 HSPs)
chr5 (3-131)||(7183191-7183319)
chr5 (3-130)||(33868834-33868961)
chr5 (15-131)||(39056348-39056464)
chr5 (3-133)||(15913015-15913145)
chr5 (53-129)||(7183331-7183407)
chr5 (53-129)||(39056248-39056324)
chr5 (53-129)||(33868973-33869049)
chr5 (69-129)||(15912943-15913003)
chr5 (55-90)||(30407683-30407718)
chr5 (55-90)||(30407884-30407919)
chr5 (55-90)||(30408086-30408121)
chr5 (55-90)||(30408691-30408726)
chr5 (55-90)||(30408891-30408926)
chr5 (55-129)||(25192284-25192358)
chr5 (75-123)||(6054427-6054475)
[»] scaffold0558 (4 HSPs)
scaffold0558 (15-142)||(10627-10754)
scaffold0558 (52-133)||(10432-10513)
scaffold0558 (52-133)||(10055-10136)
scaffold0558 (55-128)||(10758-10831)
[»] scaffold0012 (2 HSPs)
scaffold0012 (3-131)||(119256-119384)
scaffold0012 (53-129)||(119396-119472)
[»] scaffold0006 (3 HSPs)
scaffold0006 (3-131)||(209380-209508)
scaffold0006 (53-129)||(209520-209596)
scaffold0006 (65-131)||(171559-171625)
[»] chr8 (14 HSPs)
chr8 (20-131)||(44508953-44509064)
chr8 (52-133)||(17225380-17225461)
chr8 (52-133)||(40005568-40005649)
chr8 (52-133)||(40005769-40005850)
chr8 (58-133)||(40005970-40006045)
chr8 (58-130)||(40006145-40006217)
chr8 (55-90)||(17057590-17057625)
chr8 (55-90)||(17225665-17225700)
chr8 (55-90)||(17590600-17590635)
chr8 (58-90)||(40006099-40006131)
chr8 (58-130)||(40006102-40006174)
chr8 (55-90)||(17057388-17057423)
chr8 (55-90)||(17590802-17590837)
chr8 (58-86)||(17225847-17225875)
[»] chr1 (17 HSPs)
chr1 (22-131)||(5077351-5077460)
chr1 (3-133)||(13590519-13590649)
chr1 (3-131)||(20372259-20372379)
chr1 (52-133)||(19845812-19845893)
chr1 (3-64)||(20481214-20481275)
chr1 (53-129)||(20372391-20372467)
chr1 (53-129)||(20481287-20481363)
chr1 (65-131)||(13673945-13674011)
chr1 (53-129)||(13590661-13590737)
chr1 (55-129)||(19846056-19846130)
chr1 (55-90)||(37223275-37223310)
chr1 (55-90)||(37223615-37223650)
chr1 (55-90)||(37223785-37223820)
chr1 (55-90)||(37223955-37223990)
chr1 (55-88)||(37223447-37223480)
chr1 (55-90)||(37224125-37224160)
chr1 (18-46)||(15992414-15992442)
[»] chr3 (11 HSPs)
chr3 (3-131)||(32233045-32233173)
chr3 (52-133)||(40219300-40219381)
chr3 (52-133)||(40219501-40219582)
chr3 (52-133)||(40219702-40219783)
chr3 (52-133)||(40219903-40219984)
chr3 (53-129)||(32233185-32233261)
chr3 (3-96)||(41568914-41569011)
chr3 (55-90)||(11974942-11974977)
chr3 (55-90)||(11975112-11975147)
chr3 (55-90)||(11975282-11975317)
chr3 (55-90)||(11975452-11975487)
[»] scaffold0002 (2 HSPs)
scaffold0002 (3-129)||(450258-450383)
scaffold0002 (53-129)||(450395-450471)
[»] scaffold0717 (2 HSPs)
scaffold0717 (3-131)||(7226-7354)
scaffold0717 (53-138)||(7138-7222)
[»] scaffold0553 (1 HSPs)
scaffold0553 (52-133)||(6371-6450)
[»] scaffold0455 (5 HSPs)
scaffold0455 (52-126)||(1154-1228)
scaffold0455 (59-133)||(1016-1090)
scaffold0455 (55-129)||(1789-1863)
scaffold0455 (55-129)||(1391-1465)
scaffold0455 (55-129)||(1590-1664)
[»] scaffold0534 (2 HSPs)
scaffold0534 (55-90)||(5938-5973)
scaffold0534 (55-90)||(8864-8899)
[»] scaffold0144 (14 HSPs)
scaffold0144 (55-90)||(19723-19758)
scaffold0144 (55-90)||(28837-28872)
scaffold0144 (55-90)||(30983-31018)
scaffold0144 (55-90)||(33393-33428)
scaffold0144 (55-90)||(33903-33938)
scaffold0144 (55-90)||(34073-34108)
scaffold0144 (55-88)||(19385-19418)
scaffold0144 (55-88)||(34583-34616)
scaffold0144 (55-90)||(19553-19588)
scaffold0144 (55-90)||(28667-28702)
scaffold0144 (55-90)||(33563-33598)
scaffold0144 (55-90)||(34243-34278)
scaffold0144 (62-90)||(19893-19921)
scaffold0144 (58-90)||(34416-34448)
[»] scaffold0023 (4 HSPs)
scaffold0023 (55-90)||(126256-126291)
scaffold0023 (55-90)||(128579-128614)
scaffold0023 (55-90)||(126426-126461)
scaffold0023 (99-133)||(126601-126635)
[»] scaffold0581 (1 HSPs)
scaffold0581 (55-90)||(312-347)


Alignment Details
Target: chr4 (Bit Score: 206; Significance: 1e-112; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 3 - 308
Target Start/End: Original strand, 9561148 - 9561455
Alignment:
Q  3 ttattggtacaaggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtg 102  Q
    ||||||||||| | ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  9561148 ttattggtacatgattttaaataatgattaacatgttatacactaaaattattactgaaaccataagtatgatttaatggttttgataatcttcaatgtg 9561247  T
Q  103 aaaccaaaataattgtctaatggttttgtaataaaacaaaagaacaaatgtgataaagatttaaactattattcactaattatagtacacacttatacca 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  9561248 aaaccaaaataattgtctaatggttttgtaataaaacaaaagaacaaatgtgataaagatttaaactattattcactaattatagtacacacttataaca 9561347  T
Q  203 tttaaaacaattaccgaatgtgaattaatcaatcagtgaccac--nnnnnnnnnaaacctcattatctctcttttgtttcttccgttgtaaatcgaattt 300  Q
    |||||||||||||   ||| ||||||||| |||||||||||||           ||||||| | ||||||| |||||||||||||||||||| |||||||    
T  9561348 tttaaaacaattattaaatttgaattaataaatcagtgaccacttttttttgtaaaacctcgtcatctctcatttgtttcttccgttgtaaaacgaattt 9561447  T
Q  301 ctgccttt 308  Q
    ||||||||    
T  9561448 ctgccttt 9561455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 34986424 - 34986296
Alignment:
Q  3 ttattggtacaaggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtg 102  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||  || |    
T  34986424 ttattgttacatggttttaaataatgattaagatgttatacactgaaattattactgaaaccataattatggtttaatggttttgatagtcttctatgag 34986325  T
Q  103 aaaccaaaataattgtctaatggttttgt 131  Q
    |||||||||||||||||||||||||||||    
T  34986324 aaaccaaaataattgtctaatggttttgt 34986296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 2847994 - 2848123
Alignment:
Q  3 ttattggtacaaggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtg 102  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||  || |    
T  2847994 ttattgttacatggttttaaataatgattaagatgttatacactgaaattattactgaaaccataattat-gtttaatggttttgatagtcttctatgag 2848092  T
Q  103 aaaccaaaataattgtctaatggttttgtaa 133  Q
    |||| ||||||||||||||||||||||||||    
T  2848093 aaactaaaataattgtctaatggttttgtaa 2848123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 9561024 - 9561136
Alignment:
Q  17 ttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataatt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||   | ||||||||||||||||    
T  9561024 ttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatgattttgatattcttgtatatgaaaccaaaataatt 9561123  T
Q  117 gtctaatggtttt 129  Q
    |||||||| ||||    
T  9561124 gtctaatgttttt 9561136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 20588128 - 20588256
Alignment:
Q  3 ttattggtacaaggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtg 102  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||| |||||||||||||||| |||||  || |    
T  20588128 ttattgttacatggttttaaataatgattaagatgttatacactgaaactattagtgaaaccataattatgatttaatggttttgatagtcttctatgag 20588227  T
Q  103 aaaccaaaataattgtctaatggttttgt 131  Q
    |||||||||||||| || ||| |||||||    
T  20588228 aaaccaaaataattatcaaatagttttgt 20588256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 60 - 142
Target Start/End: Original strand, 810233 - 810315
Alignment:
Q  60 aaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttgtaataaaacaaa 142  Q
    ||||||||||||||||||||||||||||||| | | |  |||||||||||| |||||||||||||||||||||||||||||||    
T  810233 aaaccataagtatggtttaatggttttgatagtgtcctatgtgaaaccaaactaattgtctaatggttttgtaataaaacaaa 810315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 9561582 - 9561663
Alignment:
Q  52 tattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttgtaa 133  Q
    ||||||||||||||||||||||||||||||||||||||| | |||  ||||||| ||||||||||||||||| |||||||||    
T  9561582 tattactgaaaccataagtatggtttaatggttttgatagtgttctatgtgaaatcaaaataattgtctaatagttttgtaa 9561663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 129
Target Start/End: Complemental strand, 55780379 - 55780302
Alignment:
Q  52 tattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    ||||||||||||||||||||||||||||||||||||||| | |||  |||||||||||| ||||||||||||||||||    
T  55780379 tattactgaaaccataagtatggtttaatggttttgatagtattctatgtgaaaccaaactaattgtctaatggtttt 55780302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 129
Target Start/End: Complemental strand, 55844559 - 55844482
Alignment:
Q  52 tattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    ||||||||||||||||||||||||||||||||||||||| | |||  |||||||||||| ||||||||||||||||||    
T  55844559 tattactgaaaccataagtatggtttaatggttttgatagtattctatgtgaaaccaaactaattgtctaatggtttt 55844482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 138
Target Start/End: Original strand, 20588040 - 20588124
Alignment:
Q  53 attactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttgtaataaaa 138  Q
    |||||||||||||||||||||||||||||||||||||| ||||   ||||||||||| |||||||| ||||| |||| ||||||||    
T  20588040 attactgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatgatttt-taataaaa 20588124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 2847906 - 2847982
Alignment:
Q  53 attactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    |||||||||||||||||||||||||||||||||||||| ||||   ||||||||||| |||||||| ||||| ||||    
T  2847906 attactgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatgatttt 2847982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 808744 - 808779
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  808744 tactgaaaccataagtatggtttaatggttttgata 808779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 809115 - 809150
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  809115 tactgaaaccataagtatggtttaatggttttgata 809150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 809486 - 809521
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  809486 tactgaaaccataagtatggtttaatggttttgata 809521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 809656 - 809691
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  809656 tactgaaaccataagtatggtttaatggttttgata 809691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 810027 - 810062
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  810027 tactgaaaccataagtatggtttaatggttttgata 810062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 54754395 - 54754360
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  54754395 tactgaaaccataagtatggtttaatggttttgata 54754360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 808945 - 808980
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    |||| |||||||||||||||||||||||||||||||    
T  808945 tactaaaaccataagtatggtttaatggttttgata 808980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 809316 - 809351
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||| ||||||||    
T  809316 tactgaaaccataagtatggtttaatgattttgata 809351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 54756760 - 54756725
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||| ||||||||||||||    
T  54756760 tactgaaaccataagtatggtataatggttttgata 54756725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 54756961 - 54756926
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||| ||||||||||||||    
T  54756961 tactgaaaccataagtatggtataatggttttgata 54756926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 54757564 - 54757529
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||| ||||||||||||||    
T  54757564 tactgaaaccataagtatggtataatggttttgata 54757529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 54757765 - 54757730
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||| ||||||||||||||    
T  54757765 tactgaaaccataagtatggtataatggttttgata 54757730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 133
Target Start/End: Complemental strand, 54756375 - 54756341
Alignment:
Q  99 tgtgaaaccaaaataattgtctaatggttttgtaa 133  Q
    |||||||||||| ||||||||||||||||||||||    
T  54756375 tgtgaaaccaaactaattgtctaatggttttgtaa 54756341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 1701131 - 1701195
Alignment:
Q  64 cataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttt 128  Q
    ||||||||||||||||||||||||||| | ||   ||| |||| || |||||||| |||||||||    
T  1701131 cataagtatggtttaatggttttgatagtgttgtatgtaaaactaagataattgtgtaatggttt 1701195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 188; Significance: 1e-102; HSPs: 5)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 3 - 308
Target Start/End: Complemental strand, 539 - 229
Alignment:
Q  3 ttattggtacaaggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtg 102  Q
    ||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||  | ||||    
T  539 ttattgggacatggttttaaataatgattaacatgttatacactgaaattattactgaaaccataagtatggtttcatggttttgatagtctctaatgtg 440  T
Q  103 aaaccaaaataattgtctaatggttttgtaataaaacaaaagaacaaatgtgataaagatttaaactattattcactaattatagtacacacttatacca 202  Q
    |||||||| |||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  439 aaaccaaagtaattgtctaatggttttgtaataaaacaaaataaaaaatgtgataaacatttaaactattattcactaattatagtacacacttataaca 340  T
Q  203 tttaaaacaattaccgaatgtgaattaatcaatcagtgaccac-----nnnnnnnnnaaacctcattatctctcttttgtttcttccgttgtaaatcgaa 297  Q
    |||||| |||||| | |||||||||||||||||||||||||||              ||||||||| ||||| |||||||||| ||||||||||||||||    
T  339 tttaaaccaattatcaaatgtgaattaatcaatcagtgaccactttttttttttgtaaaacctcatcatctcccttttgtttcatccgttgtaaatcgaa 240  T
Q  298 tttctgccttt 308  Q
    |||||||||||    
T  239 tttctgccttt 229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 15 - 129
Target Start/End: Complemental strand, 795 - 681
Alignment:
Q  15 ggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataa 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||| ||| ||||   ||| ||||||| ||||    
T  795 ggttttaaataatgattaagatgttatacactgaaattattactgaaatcataagtatcgtttaatgttttttatagtcttgtatgtcaaaccaagataa 696  T
Q  115 ttgtctaatggtttt 129  Q
    |||| ||||||||||    
T  695 ttgtgtaatggtttt 681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 102 - 21
Alignment:
Q  52 tattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttgtaa 133  Q
    ||||||||||||||||||||||||||||||||||||||| | |||  |||||||||||||||||||||||||||||||||||    
T  102 tattactgaaaccataagtatggtttaatggttttgatagtgttctatgtgaaaccaaaataattgtctaatggttttgtaa 21  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 669 - 551
Alignment:
Q  3 ttattggtacaaggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtg 102  Q
    ||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| | ||||| | |||||| ||||    
T  669 ttattggtacatggttttaaataatgattaagatg-------ctgaaattattactgaaaccataagtatggtttaatag-tttgaaagtcttcaatgtg 578  T
Q  103 aaaccaaaataattgtctaatggtttt 129  Q
    |||||||||||||| |||| |||||||    
T  577 aaaccaaaataattatctagtggtttt 551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 865 - 790
Alignment:
Q  53 attactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    |||||||||||||||||||||||| ||||||||||||| ||||   ||||||||||| |||||||| ||||||||||    
T  865 attactgaaaccataagtatggtt-aatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttt 790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 3 - 308
Target Start/End: Original strand, 18762728 - 18763036
Alignment:
Q  3 ttattggtacaaggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtg 102  Q
    ||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||    
T  18762728 ttattggtacatgattttaaataatgattaacatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgacagtcttcaatgtg 18762827  T
Q  103 aaaccaaaataattgtctaatggttttgtaataaaacaaaagaacaaatgtgataaagatttaaactattattcactaattatagtacacact--tatac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||| ||||||||||| |  ||||     
T  18762828 aaaccaaaataattgtctaatggttttgtaataaaacaaaagaacaaatatgataaacatttaaaccattattcactaactatagtacacaatgatataa 18762927  T
Q  201 catttaaaacaattaccgaatgtgaattaatcaatcagtgacca-cnnnnnnnnnaaacctcattatctctcttttgtttcttccgttgtaaatcgaatt 299  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| |         ||||||||| |||||||||||||||||||||||  ||| ||||||    
T  18762928 catttaaaacaattaccaaatgggaattaatcaatcagtgaccaccttttttgtaaaacctcatcatctctcttttgtttcttccgttacaaaacgaatt 18763027  T
Q  300 tctgccttt 308  Q
    | |||||||    
T  18763028 tttgccttt 18763036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 15 - 129
Target Start/End: Original strand, 18762602 - 18762716
Alignment:
Q  15 ggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataa 114  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||| |||||||||||||    
T  18762602 ggttttaaataatgattaagatgttatacactgaaattattaatgaaacaataagtatggtttaatgattttgatagtcttcattgagaaaccaaaataa 18762701  T
Q  115 ttgtctaatggtttt 129  Q
    |||||||||||||||    
T  18762702 ttgtctaatggtttt 18762716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 7851511 - 7851393
Alignment:
Q  10 tacaaggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaa 109  Q
    |||| ||||||||||||||||||||||||   ||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||  || ||||||||    
T  7851511 tacatggttttaaataatgattaagatgt---acattgaaattattactgaaaccataattatggtttaatggttttgatagtcttctatgagaaaccaa 7851415  T
Q  110 aataattgtctaatggttttgt 131  Q
    ||||||| ||||||||||||||    
T  7851414 aataattttctaatggttttgt 7851393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 15 - 129
Target Start/End: Original strand, 18762493 - 18762607
Alignment:
Q  15 ggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataa 114  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||   ||||||| ||| ||||    
T  18762493 ggttttaaataatgattaagaggttatacactgaaattattactgaaaccataagtatggtttaatggttttgatagtattgtatgtgaaaacaagataa 18762592  T
Q  115 ttgtctaatggtttt 129  Q
     ||| ||||||||||    
T  18762593 atgtgtaatggtttt 18762607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 32556527 - 32556400
Alignment:
Q  3 ttattggtacaaggttttaaataatgattaagat-gttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgt 101  Q
    |||||| |||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||||  ||     
T  32556527 ttattgttacatggttttaaataatgattaagatagttatacactgaaattattattgaaaccataattattgtttagtggttttgataatcttctatga 32556428  T
Q  102 gaaaccaaaataattgtctaatggtttt 129  Q
     |||| |||||||||||||||| |||||    
T  32556427 aaaactaaaataattgtctaatcgtttt 32556400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 28123142 - 28123068
Alignment:
Q  52 tattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggt 126  Q
    |||||| ||||||||| |||||||||||||||||||||| | |||  |||||||||||| |||||||| ||||||    
T  28123142 tattacagaaaccatatgtatggtttaatggttttgatagtgttctatgtgaaaccaaactaattgtcaaatggt 28123068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 134
Target Start/End: Complemental strand, 32556611 - 32556535
Alignment:
Q  58 tgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttgtaat 134  Q
    ||||||||||| ||||||||||||||||||||| ||||   ||||||||||| |||||||| ||||| |||| ||||    
T  32556611 tgaaaccataaatatggtttaatggttttgatagtcttgcatgtgaaaccaagataattgtgtaatgattttttaat 32556535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 28123004 - 28122930
Alignment:
Q  59 gaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttgtaa 133  Q
    ||||||||| ||||||||||||||||||||   | |||  | |||||||||| ||||||||||||||||||||||    
T  28123004 gaaaccatatgtatggtttaatggttttgacggtgttctatatgaaaccaaactaattgtctaatggttttgtaa 28122930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 18762422 - 18762498
Alignment:
Q  53 attactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    ||||||||||| ||||||||||||||||||||||  || | ||   ||||||||||| |||||||| ||||||||||    
T  18762422 attactgaaacaataagtatggtttaatggtttttttagtattgcatgtgaaaccaagataattgtgtaatggtttt 18762498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 22038107 - 22038142
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  22038107 tactgaaaccataagtatggtttaatggttttgata 22038142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 28123379 - 28123305
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    ||||||||||||||||||||| |||||||||||||| | |||  ||| ||||||| ||||  || ||||||||||    
T  28123379 tactgaaaccataagtatggtataatggttttgatagtgttcgatgtaaaaccaatataagggtgtaatggtttt 28123305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 28123578 - 28123504
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    ||||||||||||||||||||| |||||||||||||| | |||  ||| ||||||| ||||  || ||||||||||    
T  28123578 tactgaaaccataagtatggtataatggttttgatagtgttctatgtaaaaccaatataagggtgtaatggtttt 28123504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 7851603 - 7851530
Alignment:
Q  56 actgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    ||||||||||||||| |||||||||| |||||||| ||||   ||| ||||||| |||||||| ||||| ||||    
T  7851603 actgaaaccataagtgtggtttaatgattttgatagtcttgtatgtaaaaccaagataattgtgtaatgatttt 7851530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 130
Target Start/End: Complemental strand, 15034078 - 15034003
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttg 130  Q
    ||||||||||||||||||||| |||||||||||||| | |||  ||| |||||| | | || || |||||||||||    
T  15034078 tactgaaaccataagtatggtataatggttttgatagtgttctatgtaaaaccatacttatggtgtaatggttttg 15034003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 90
Target Start/End: Original strand, 22038313 - 22038343
Alignment:
Q  60 aaaccataagtatggtttaatggttttgata 90  Q
    |||||||||||||||||||||||||||||||    
T  22038313 aaaccataagtatggtttaatggttttgata 22038343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 133
Target Start/End: Original strand, 22038653 - 22038687
Alignment:
Q  99 tgtgaaaccaaaataattgtctaatggttttgtaa 133  Q
    |||||||||||| ||||||||||||||||||||||    
T  22038653 tgtgaaaccaaactaattgtctaatggttttgtaa 22038687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 179; Significance: 1e-96; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 15 - 308
Target Start/End: Complemental strand, 10564271 - 10563975
Alignment:
Q  15 ggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataa 114  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||| | ||| || ||||||||||||||||    
T  10564271 ggttttaaataatgattaaaatgttatacactgaaattattactgaaaccataagtatgacttaatggttttgacagtctacaatgtgaaaccaaaataa 10564172  T
Q  115 ttgtctaatggttttgtaataaaacaaaagaacaaatgtgataaagatttaaactattattcactaattatagtacacact--tataccatttaaaacaa 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||  |||| ||||||||||||    
T  10564171 ttgtctaatggttttgtaataaaacaaaagaacaaatgtgataaacatttaaaccattattcactaactatagtacacacttatataacatttaaaacaa 10564072  T
Q  213 ttaccgaatgtgaattaatcaatcagtgaccac-nnnnnnnnnaaacctcattatctctcttttgtttcttccgttgtaaatcgaatttctgccttt 308  Q
    ||| | ||||||||||||||||| |||||||||          ||||||||| |||||||||||||||||||||||| |||  ||||||||||||||    
T  10564071 ttatcaaatgtgaattaatcaattagtgaccactttttttgtaaaacctcatcatctctcttttgtttcttccgttgcaaaatgaatttctgccttt 10563975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 15 - 234
Target Start/End: Complemental strand, 12283400 - 12283179
Alignment:
Q  15 ggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||||||||||    
T  12283400 ggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatgatttaatggttttgacagtcttcaatgtgaaaccaaaataa 12283301  T
Q  115 ttgtctaatggttttgtaataaaacaaaagaacaaatgtgataaagatttaaactattattcactaattatagtacacact--tataccatttaaaacaa 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||| |||| |||||||||||||  |||| ||||||||||||    
T  12283300 ttgtctaatggttttgtaataaaacaaaagaacaaatgtgataaacattgaaaccattattccctaactatagtacacacttatataacatttaaaacaa 12283201  T
Q  213 ttaccgaatgtgaattaatcaa 234  Q
    ||| | ||||||||||||||||    
T  12283200 ttatcaaatgtgaattaatcaa 12283179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 45402754 - 45402884
Alignment:
Q  3 ttattggtacaaggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtg 102  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||   || |    
T  45402754 ttattgttacatggttttaaataatgattaagatgttatacactgaaattattattgaaaccataattatggtttaatggttttgatagtcttttatgag 45402853  T
Q  103 aaaccaaaataattgtctaatggttttgtaa 133  Q
    ||||||||||||| |||||||||||||||||    
T  45402854 aaaccaaaataatagtctaatggttttgtaa 45402884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 6797269 - 6797389
Alignment:
Q  3 ttattggtacaaggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtg 102  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||   || |    
T  6797269 ttattgttacatggttttaaataatgattaagatgttatacactgaaactattactgaaaccataattatggtttaatggttttgatagtcttttatgag 6797368  T
Q  103 aaaccaaaataattgtctaat 123  Q
    |||||||||||||||||||||    
T  6797369 aaaccaaaataattgtctaat 6797389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 15 - 129
Target Start/End: Complemental strand, 12283509 - 12283395
Alignment:
Q  15 ggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | ||   ||||||||||| ||||    
T  12283509 ggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatgattttgacagtattgtatgtgaaaccaagataa 12283410  T
Q  115 ttgtctaatggtttt 129  Q
    |||| ||||||||||    
T  12283409 ttgtgtaatggtttt 12283395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 15 - 129
Target Start/End: Complemental strand, 12283618 - 12283504
Alignment:
Q  15 ggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | | ||   ||||||||||| ||||    
T  12283618 ggttttaaataatgattaagatgttatacactgaaattattaccgaaaccataagtatggtttaatggttttgacagtattgtatgtgaaaccaagataa 12283519  T
Q  115 ttgtctaatggtttt 129  Q
    |||| ||||||||||    
T  12283518 ttgtgtaatggtttt 12283504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 21405929 - 21406027
Alignment:
Q  18 tttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataatt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||  |  |||||||||||||||    
T  21405929 tttaaataatgattaagatgttatacactgaaattattactgaaatcataattatggtttaatggttttgatagtcttctataagaaaccaaaataatt 21406027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 133
Target Start/End: Complemental strand, 12283162 - 12283079
Alignment:
Q  50 attattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttgtaa 133  Q
    |||||||||||||| |||||||||||||||||||||||||| | |||  ||||||||||| |||||||||||||||||||||||    
T  12283162 attattactgaaactataagtatggtttaatggttttgatagtgttctatgtgaaaccaacataattgtctaatggttttgtaa 12283079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 10564548 - 10564457
Alignment:
Q  39 tatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttg 130  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||   |||||||||| ||  ||||| |||||||||||    
T  10564548 tatacactgaaattatgactgaaaccataagtatggtttaatggttttgatagtattgtatgtgaaaccataaatattgtgtaatggttttg 10564457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 10564356 - 10564266
Alignment:
Q  39 tatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||| | ||   ||||||||||| |||| ||| ||||||||||    
T  10564356 tatacactgaaattatttctgaaaccataagtatgatttaatggttttgatagtattgtatgtgaaaccaagataaatgtgtaatggtttt 10564266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 128
Target Start/End: Complemental strand, 10564643 - 10564554
Alignment:
Q  39 tatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttt 128  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||   |||||||||| ||  ||||| |||||||||    
T  10564643 tatacactgaaattatgactgaaaccataagtatggtttaatggttttgatattattgtatgtgaaaccataaatattgtgtaatggttt 10564554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 45402666 - 45402742
Alignment:
Q  53 attactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    |||||||||||||||||||||||||||||||||||||| ||||   ||||||||||| |||||||| ||||| ||||    
T  45402666 attactgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatgatttt 45402742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 52 - 130
Target Start/End: Complemental strand, 10563908 - 10563830
Alignment:
Q  52 tattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttg 130  Q
    |||||||||||||||||||||||||||| |||||||||| | || | ||||||||||| |||||||| ||||| |||||    
T  10563908 tattactgaaaccataagtatggtttaacggttttgatagtattaaatgtgaaaccaagataattgtgtaatgattttg 10563830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 10564452 - 10564399
Alignment:
Q  39 tatacactgaaattattactgaaaccataagtatggtttaatggttttgataat 92  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  10564452 tatacactgaaattatgaccgaaaccataagtatggtttaatggttttgataat 10564399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 6797182 - 6797257
Alignment:
Q  53 attactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    ||||||||||||||| |||||||||||||||||||||| ||||   ||||||||||| |||||||| ||||||||||    
T  6797182 attactgaaaccata-gtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttt 6797257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 10564725 - 10564648
Alignment:
Q  53 attactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttg 130  Q
    |||||||||||||||||||||||||||||||||||||| | ||   |||||||||| ||  ||||| |||||||||||    
T  10564725 attactgaaaccataagtatggtttaatggttttgatagtattgtatgtgaaaccataaatattgtgtaatggttttg 10564648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 4721019 - 4721054
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  4721019 tactgaaaccataagtatggtttaatggttttgata 4721054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 13420428 - 13420502
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    |||||||||||||||||||||| ||||||||||||| | ||| |||| |||||| | | || || ||||||||||    
T  13420428 tactgaaaccataagtatggttgaatggttttgatagtgttctttgtaaaaccatacttatggtgtaatggtttt 13420502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 13420629 - 13420664
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||| ||||||||||||||    
T  13420629 tactgaaaccataagtatggtgtaatggttttgata 13420664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 173; Significance: 5e-93; HSPs: 7)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 15 - 308
Target Start/End: Original strand, 16192 - 16487
Alignment:
Q  15 ggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataa 114  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||| | |||||| ||||||||||||||||    
T  16192 ggttttaaataatgattaagatgttatacactgaaattattactaaaactataagtatggcttaatggttttgacagtcttcaatgtgaaaccaaaataa 16291  T
Q  115 ttgtctaatggttttgtaataaaacaaaagaacaaatgtgataaagatttaaactattattcactaattatagtacacacttatacca-tttaaaacaat 213  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||  |  ||||||||||    
T  16292 ttgtgtaatggttttgtaataaaacaaaagaacaaatgtgataaacatttaaaccattattcactaactatagtacacacttatataacattaaaacaat 16391  T
Q  214 taccgaatgtgaattaatcaatcagtgaccac-nnnnnnnnnaaacctcattatctctcttttgtttcttccgttgtaaatcgaatttctgccttt 308  Q
    |||| |||||||||| ||||||||||||||||          |||||| || |||||||||||||||||||||||| |||  ||||||||||||||    
T  16392 taccaaatgtgaatttatcaatcagtgaccactttttttgtaaaaccttatcatctctcttttgtttcttccgttgcaaaatgaatttctgccttt 16487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 34 - 130
Target Start/End: Original strand, 22584 - 22680
Alignment:
Q  34 gatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttg 130  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||   ||||||||||| |||| ||| |||||||||||    
T  22584 gatgttatacactaaaattattactgaaaccataagtatggtttaatggttttgatagtattgtatgtgaaaccaagataaatgtgtaatggttttg 22680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 22770 - 22870
Alignment:
Q  24 taatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaat 123  Q
    ||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| | ||   |||||||||||||||||||| ||||    
T  22770 taatgattttgatgttatccactgaaattattactgaaaccataagtatggtttaatgattttgatagtattgtatgtgaaaccaaaataattgtgtaat 22869  T
Q  124 g 124  Q
    |    
T  22870 g 22870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 16106 - 16197
Alignment:
Q  38 ttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||   |||||||||||||||| | | ||||||||||    
T  16106 ttatacactgaaattattactgaaaccataagtatggtttaatggttttgatagtattgtatgtgaaaccaaaataaatatgtaatggtttt 16197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 22877 - 22931
Alignment:
Q  35 atgttatacactgaaattattactgaaaccataagtatggtttaatggttttgat 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22877 atgttatacactgaaattattactgaaaccataagtatggtttaatggttttgat 22931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 130
Target Start/End: Original strand, 22680 - 22780
Alignment:
Q  34 gatgttatacactgaaattattactgaaaccataag----tatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    ||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||| | ||   ||||||||||| |||| ||| ||||| ||||    
T  22680 gatgttatacactgaaattattactgaaaccataagtatttatggtttaatggttttgatagtattgtatgtgaaaccaagataaatgtgtaatgatttt 22779  T
Q  130 g 130  Q
    |    
T  22780 g 22780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 52 - 130
Target Start/End: Original strand, 16511 - 16589
Alignment:
Q  52 tattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttg 130  Q
    ||||||||||||||||||||||||||||||||||| ||| | || | ||||||||||| || ||||| |||||||||||    
T  16511 tattactgaaaccataagtatggtttaatggttttaatagtattaaatgtgaaaccaagattattgtgtaatggttttg 16589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 108; Significance: 3e-54; HSPs: 5)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 39207 - 39334
Alignment:
Q  15 ggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataa 114  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||    
T  39207 ggttttaaataatgattaagatgttatgcactgaaattattactgaaaccatacgtatggtttaatggttttgataattttcaatgtgaaaccaaaataa 39306  T
Q  115 ttgtctaatggttttgtaataaaacaaa 142  Q
    |||||||||||||||||||| |||||||    
T  39307 ttgtctaatggttttgtaatgaaacaaa 39334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 39473 - 39554
Alignment:
Q  52 tattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttgtaa 133  Q
    ||||||||||||||||||||||||||||| ||||||||| | |||  |||||||||||| ||||||||||||||||||||||    
T  39473 tattactgaaaccataagtatggtttaatagttttgatagtgttctatgtgaaaccaaactaattgtctaatggttttgtaa 39554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 39850 - 39931
Alignment:
Q  52 tattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttgtaa 133  Q
    ||||||||||||||| |  ||||||||||||||||||| || |||  |||||||||||| ||||||||||||||||||||||    
T  39850 tattactgaaaccatcaacatggtttaatggttttgattatgttctatgtgaaaccaaactaattgtctaatggttttgtaa 39931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 39112 - 39184
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtt 127  Q
    ||||||||||||||||||||||||||| |||||||| | ||   ||| ||||||| |||||||| ||||||||    
T  39112 tactgaaaccataagtatggtttaatgattttgatagtgttgtatgtaaaaccaagataattgtgtaatggtt 39184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 38883 - 38957
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    |||||||||| | |||| |||||||||||||||||| | |||  |||||||| |||| ||||| |||||||||||    
T  38883 tactgaaaccgtgagtaaggtttaatggttttgatagtgttctatgtgaaacaaaaagaattgcctaatggtttt 38957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 5e-50; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 24024508 - 24024636
Alignment:
Q  3 ttattggtacaaggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtg 102  Q
    |||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  || |    
T  24024508 ttattgttacatagttttaaataatgattaagatgttatacactgaaattattactgaaaccataattatggtttaatggttttgataatcttctatgag 24024607  T
Q  103 aaaccaaaataattgtctaatggttttgt 131  Q
    |||||||||||||||||||||||||||||    
T  24024608 aaaccaaaataattgtctaatggttttgt 24024636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 30771490 - 30771400
Alignment:
Q  46 tgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttgtaataa 136  Q
    |||||| |||||| ||||||||||||||| ||||||||||||| | |||||| ||||||||||||||||||||||||||||||| ||||||    
T  30771490 tgaaatcattactaaaaccataagtatggcttaatggttttgacagtcttcaatgtgaaaccaaaataattgtctaatggttttttaataa 30771400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 30771409 - 30771316
Alignment:
Q  17 ttttaaataatgattaagatgttatacactgaaattatt-actgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaa 109  Q
    |||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||| | |||||| |||||||||||    
T  30771409 tttttaataatgattaagatgttatacactgaaattatagactgaaaccataagtatggcttaatggttttgacagtcttcaatgtgaaaccaa 30771316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 28048325 - 28048244
Alignment:
Q  52 tattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttgtaa 133  Q
    ||||||||||||||||||||||||||||||||||||||| | |||  |||||||||||| |||||||||| |||||||||||    
T  28048325 tattactgaaaccataagtatggtttaatggttttgatagtgttctatgtgaaaccaaactaattgtctagtggttttgtaa 28048244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 28056178 - 28056102
Alignment:
Q  7 tggtacaaggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggt 83  Q
    ||||||| || |||||||||||||||| || |||||||||||||||||||||||||| ||||| |||||||||||||    
T  28056178 tggtacatgggtttaaataatgattaaaatattatacactgaaattattactgaaacaataagcatggtttaatggt 28056102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 28056268 - 28056194
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    |||||||||||||||||||||||||||||||||||| ||||   ||| ||||||| |||||||| ||||||||||    
T  28056268 tactgaaaccataagtatggtttaatggttttgatagtcttgtatgtaaaaccaatataattgtgtaatggtttt 28056194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 21173668 - 21173703
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  21173668 tactgaaaccataagtatggtttaatggttttgata 21173703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 27970607 - 27970572
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  27970607 tactgaaaccataagtatggtttaatggttttgata 27970572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 44348258 - 44348293
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  44348258 tactgaaaccataagtatggtttaatggttttgata 44348293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 44350782 - 44350817
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  44350782 tactgaaaccataagtatggtttaatggttttgata 44350817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 21173498 - 21173533
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||| ||||||||||||||||    
T  21173498 tactgaaaccataagtatgatttaatggttttgata 21173533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 90
Target Start/End: Complemental strand, 27970401 - 27970371
Alignment:
Q  60 aaaccataagtatggtttaatggttttgata 90  Q
    |||||||||||||||||||||||||||||||    
T  27970401 aaaccataagtatggtttaatggttttgata 27970371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 89
Target Start/End: Complemental strand, 27970777 - 27970743
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgat 89  Q
    |||| ||||||||||||||||||||||||||||||    
T  27970777 tactaaaaccataagtatggtttaatggttttgat 27970743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 133
Target Start/End: Complemental strand, 28056566 - 28056532
Alignment:
Q  99 tgtgaaaccaaaataattgtctaatggttttgtaa 133  Q
    |||||||||||| ||||||||||||||||||||||    
T  28056566 tgtgaaaccaaactaattgtctaatggttttgtaa 28056532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 90
Target Start/End: Complemental strand, 28056906 - 28056876
Alignment:
Q  60 aaaccataagtatggtttaatggttttgata 90  Q
    |||||||||||||||||||||||||||||||    
T  28056906 aaaccataagtatggtttaatggttttgata 28056876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 90
Target Start/End: Complemental strand, 30767614 - 30767584
Alignment:
Q  60 aaaccataagtatggtttaatggttttgata 90  Q
    |||||||||||||||||||||||||||||||    
T  30767614 aaaccataagtatggtttaatggttttgata 30767584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 90
Target Start/End: Complemental strand, 30771777 - 30771747
Alignment:
Q  60 aaaccataagtatggtttaatggttttgata 90  Q
    |||||||||||||||||||||||||||||||    
T  30771777 aaaccataagtatggtttaatggttttgata 30771747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 90
Target Start/End: Original strand, 44348464 - 44348494
Alignment:
Q  60 aaaccataagtatggtttaatggttttgata 90  Q
    |||||||||||||||||||||||||||||||    
T  44348464 aaaccataagtatggtttaatggttttgata 44348494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 133
Target Start/End: Original strand, 44348804 - 44348838
Alignment:
Q  99 tgtgaaaccaaaataattgtctaatggttttgtaa 133  Q
    |||||||||||| ||||||||||||||||||||||    
T  44348804 tgtgaaaccaaactaattgtctaatggttttgtaa 44348838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 88
Target Start/End: Complemental strand, 27970236 - 27970203
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttga 88  Q
    |||||||||||||| |||||||||||||||||||    
T  27970236 tactgaaaccataaatatggtttaatggttttga 27970203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 88
Target Start/End: Complemental strand, 28056741 - 28056708
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttga 88  Q
    |||||||||||||| |||||||||||||||||||    
T  28056741 tactgaaaccataaatatggtttaatggttttga 28056708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 100; Significance: 2e-49; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 15 - 138
Target Start/End: Complemental strand, 168632 - 168509
Alignment:
Q  15 ggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataa 114  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| | |||| ||||||||||||||||    
T  168632 ggttataaataatgattaagatgttatgcactgaaattattactgaaaccatacgtatggtttaatggttttgatagttttcaatgtgaaaccaaaataa 168533  T
Q  115 ttgtctaatggttttgtaataaaa 138  Q
    ||||||||||||||||||||||||    
T  168532 ttgtctaatggttttgtaataaaa 168509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 168401 - 168320
Alignment:
Q  52 tattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttgtaa 133  Q
    |||||||||||||||||||||| |||||||||||||||| | |||  |||||||||||| ||||| ||||||||||||||||    
T  168401 tattactgaaaccataagtatgatttaatggttttgatagtgttctatgtgaaaccaaactaattttctaatggttttgtaa 168320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 168727 - 168654
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttt 128  Q
    |||||||||||||||||||||||||||||||||||| | ||   ||| ||||||| |||||||  |||||||||    
T  168727 tactgaaaccataagtatggtttaatggttttgatagtgttgtatgtaaaaccaagataattgcgtaatggttt 168654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 1786 - 1658
Alignment:
Q  3 ttattggtacaaggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtg 102  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||   || |    
T  1786 ttattgttacatggttttaaataatgattaagatgttatacactgaaattattactgaaaccataattatggtttaatggttttgatattcttttatgag 1687  T
Q  103 aaaccaaaataattgtctaatggttttgt 131  Q
    |||||||||||||||||||||||||||||    
T  1686 aaaccaaaataattgtctaatggttttgt 1658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 1874 - 1798
Alignment:
Q  53 attactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    |||||||||||||||||||||||||||||||||||||| ||||   ||||||||||| |||||||| ||||||||||    
T  1874 attactgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttt 1798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 51541 - 51413
Alignment:
Q  3 ttattggtacaaggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtg 102  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||   || |    
T  51541 ttattgttacatggttttaaataatgattaagatgttatacactgaaattattactgaaaccataattatggtttaatggttttgatagtcttatatgag 51442  T
Q  103 aaaccaaaataattgtctaatggttttgt 131  Q
    |||||||||||||||||||||||||||||    
T  51441 aaaccaaaataattgtctaatggttttgt 51413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 51629 - 51553
Alignment:
Q  53 attactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    ||||| |||||||||||||||||||||||||||||||| ||||   ||||||||||| |||||||| ||||||||||    
T  51629 attaccgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttt 51553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 1e-47; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 7183319 - 7183191
Alignment:
Q  3 ttattggtacaaggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtg 102  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||  || |    
T  7183319 ttattgttacatggttttaaataatgattaagatgttatacactgaaattattactgaaaccataattatggtttaatgattttgatagtcttctatgag 7183220  T
Q  103 aaaccaaaataattgtctaatggttttgt 131  Q
    |||||||||||||||||||||||||||||    
T  7183219 aaaccaaaataattgtctaatggttttgt 7183191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 33868961 - 33868834
Alignment:
Q  3 ttattggtacaaggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtg 102  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||  || |    
T  33868961 ttattgttacatggttttaaataatgattaagatgttatacactgaaattattactgaaaccataattatggtttaatggttttgatagtcttctatgag 33868862  T
Q  103 aaaccaaaataattgtctaatggttttg 130  Q
    |||||||||||||||||||||| |||||    
T  33868861 aaaccaaaataattgtctaatgattttg 33868834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 39056348 - 39056464
Alignment:
Q  15 ggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataa 114  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||  || |||||||||||||    
T  39056348 ggttttaaataacgattaagatggtatacactgaaattattactgaaaccataattatggtttaatggttttgatagtcttctatgagaaaccaaaataa 39056447  T
Q  115 ttgtctaatggttttgt 131  Q
    |||||||||||||||||    
T  39056448 ttgtctaatggttttgt 39056464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 15913015 - 15913145
Alignment:
Q  3 ttattggtacaaggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtg 102  Q
    |||||| |||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| |||||  || |    
T  15913015 ttattgttacatgattttaaataatgattaagatgttatacactaaaattattactgaaaccataattatggtttaatgattttgatagtcttctatgag 15913114  T
Q  103 aaaccaaaataattgtctaatggttttgtaa 133  Q
    |||||||||||||||| | ||||||||||||    
T  15913115 aaaccaaaataattgtatgatggttttgtaa 15913145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 7183407 - 7183331
Alignment:
Q  53 attactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    |||||||||||||||||||||||||||||||||||||| ||||   ||||||||||| |||||||| ||||||||||    
T  7183407 attactgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttt 7183331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 39056248 - 39056324
Alignment:
Q  53 attactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    |||||||||||||||||||||||||||||||||||||| ||||   ||||||||||| |||||||| ||||||||||    
T  39056248 attactgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttt 39056324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 33869049 - 33868973
Alignment:
Q  53 attactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    ||||||||||||| |||||||||||||||||||||||| ||||   ||||||||||| |||||||| ||||| ||||    
T  33869049 attactgaaaccaaaagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatgatttt 33868973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 15912943 - 15913003
Alignment:
Q  69 gtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    |||||||||||||||||||||| ||||   ||||||||||| |||||||| ||||||||||    
T  15912943 gtatggtttaatggttttgatagtcttgtatgtgaaaccaatataattgtgtaatggtttt 15913003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 30407683 - 30407718
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||| ||||||||||||||    
T  30407683 tactgaaaccataagtatggtataatggttttgata 30407718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 30407884 - 30407919
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||| ||||||||||||||    
T  30407884 tactgaaaccataagtatggtataatggttttgata 30407919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 30408086 - 30408121
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||| ||||||||||||||    
T  30408086 tactgaaaccataagtatggtataatggttttgata 30408121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 30408691 - 30408726
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||| ||||||||||||||    
T  30408691 tactgaaaccataagtatggtataatggttttgata 30408726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 30408891 - 30408926
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||| ||||||||||||||    
T  30408891 tactgaaaccataagtatggtataatggttttgata 30408926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 25192284 - 25192358
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    ||||||||||||| |||||||||||||||||||| | | |||  ||| ||||||| ||||  || ||||||||||    
T  25192284 tactgaaaccatacgtatggtttaatggttttgaaagtgttctatgtaaaaccaagataagggtgtaatggtttt 25192358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 6054475 - 6054427
Alignment:
Q  75 tttaatggttttgataatcttcattgtgaaaccaaaataattgtctaat 123  Q
    |||||||||||||||  |||||  || ||||||||||||||||||||||    
T  6054475 tttaatggttttgattgtcttctatgagaaaccaaaataattgtctaat 6054427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558 (Bit Score: 96; Significance: 5e-47; HSPs: 4)
Name: scaffold0558
Description:

Target: scaffold0558; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 10754 - 10627
Alignment:
Q  15 ggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataa 114  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||| | |||| ||||||||||||||||    
T  10754 ggttttatataatgattaagatgttatgcactgaaattattactgaaaccatacgtatagtttaatggttttgatagttttcaatgtgaaaccaaaataa 10655  T
Q  115 ttgtctaatggttttgtaataaaacaaa 142  Q
    || |||||||||||||||||||||||||    
T  10654 ttttctaatggttttgtaataaaacaaa 10627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 10513 - 10432
Alignment:
Q  52 tattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttgtaa 133  Q
    |||||||||||||||||||||||||||||||||||| || | |||  |||||||||||| ||||||||||||||||||||||    
T  10513 tattactgaaaccataagtatggtttaatggttttggtagtgttctatgtgaaaccaaactaattgtctaatggttttgtaa 10432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 10136 - 10055
Alignment:
Q  52 tattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttgtaa 133  Q
    ||||| ||||||||||||||||||||||||||||||||| | |||  |||||||||||| | ||||||||||||||||||||    
T  10136 tattattgaaaccataagtatggtttaatggttttgatagtgttctatgtgaaaccaaacttattgtctaatggttttgtaa 10055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 10831 - 10758
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttt 128  Q
    |||||||||||||||||||||||||||||||||||| | ||   ||| ||||||| |||||||| |||||||||    
T  10831 tactgaaaccataagtatggtttaatggttttgatagtgttgtatgtaaaaccaagataattgtgtaatggttt 10758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 89; Significance: 7e-43; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 119384 - 119256
Alignment:
Q  3 ttattggtacaaggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtg 102  Q
    |||||| ||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||   || |    
T  119384 ttattgttacatagttttaaataatgattaagatgttatatactgaaattattactgaaaccataattatggtttaatggttttgatagtcttatatgag 119285  T
Q  103 aaaccaaaataattgtctaatggttttgt 131  Q
    |||||||||||||||||||||||||||||    
T  119284 aaaccaaaataattgtctaatggttttgt 119256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 119472 - 119396
Alignment:
Q  53 attactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    |||||||||||||||||||||||||||||||||||||| ||||   ||||||||||| |||||||| ||||||||||    
T  119472 attactgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttt 119396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 89; Significance: 7e-43; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 209508 - 209380
Alignment:
Q  3 ttattggtacaaggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtg 102  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||   || |    
T  209508 ttattgttacatggttttaaataatgattaagatgttatacactgaaattattactgaaacaataattatggtttaatggttttgatagtcttatatgag 209409  T
Q  103 aaaccaaaataattgtctaatggttttgt 131  Q
    ||||||||||||||||||||| |||||||    
T  209408 aaaccaaaataattgtctaattgttttgt 209380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 209596 - 209520
Alignment:
Q  53 attactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    |||||||||||||||||||| ||||||||||||||||||||||   ||||||||||| |||||||| ||||||||||    
T  209596 attactgaaaccataagtatagtttaatggttttgataatcttgtatgtgaaaccaagataattgtgtaatggtttt 209520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 171625 - 171559
Alignment:
Q  65 ataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttgt 131  Q
    |||| ||||||||||||||||||||| ||||   || ||||||||||||||||||||||||||||||    
T  171625 ataattatggtttaatggttttgatagtcttatatgagaaaccaaaataattgtctaatggttttgt 171559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 7e-40; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 20 - 131
Target Start/End: Original strand, 44508953 - 44509064
Alignment:
Q  20 taaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtc 119  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||  || |||| |||||||||||||    
T  44508953 taaataatgattaagatgttatacactgaaattattattgaaaccataattatggtttaatggttttgatagtcttctatgagaaatcaaaataattgtc 44509052  T
Q  120 taatggttttgt 131  Q
    ||||||||||||    
T  44509053 taatggttttgt 44509064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 17225461 - 17225380
Alignment:
Q  52 tattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttgtaa 133  Q
    |||||| |||||||||||||||||||||||||||||||| | |||  |||||||||||| ||||||||||||||||||||||    
T  17225461 tattacagaaaccataagtatggtttaatggttttgatagtgttctatgtgaaaccaaactaattgtctaatggttttgtaa 17225380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 40005649 - 40005568
Alignment:
Q  52 tattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttgtaa 133  Q
    |||||||||||||||||||||||| |||||||||||||| | |||  |||||||||||| |||| |||||||||||||||||    
T  40005649 tattactgaaaccataagtatggtctaatggttttgatagtgttctatgtgaaaccaaactaatggtctaatggttttgtaa 40005568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 40005850 - 40005769
Alignment:
Q  52 tattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttgtaa 133  Q
    |||||||||||||||||||||||| |||||||||||||| | |||  |||||||||||| |||| |||||||||||||||||    
T  40005850 tattactgaaaccataagtatggtctaatggttttgatactgttctatgtgaaaccaaactaatggtctaatggttttgtaa 40005769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 133
Target Start/End: Complemental strand, 40006045 - 40005970
Alignment:
Q  58 tgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttgtaa 133  Q
    |||||||||||||||||| |||||||||||||| | |||  |||||||||||| |||| |||||||||||||||||    
T  40006045 tgaaaccataagtatggtctaatggttttgatagtgttctatgtgaaaccaaactaatggtctaatggttttgtaa 40005970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 58 - 130
Target Start/End: Complemental strand, 40006217 - 40006145
Alignment:
Q  58 tgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttg 130  Q
    ||||||||||||||||||||||||||||||||| | |||  |||||||||| ||  || || |||||||||||    
T  40006217 tgaaaccataagtatggtttaatggttttgatagtgttctatgtgaaaccataagtatggtgtaatggttttg 40006145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 17057590 - 17057625
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  17057590 tactgaaaccataagtatggtttaatggttttgata 17057625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 17225700 - 17225665
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  17225700 tactgaaaccataagtatggtttaatggttttgata 17225665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 17590635 - 17590600
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  17590635 tactgaaaccataagtatggtttaatggttttgata 17590600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 40006131 - 40006099
Alignment:
Q  58 tgaaaccataagtatggtttaatggttttgata 90  Q
    |||||||||||||||||||||||||||||||||    
T  40006131 tgaaaccataagtatggtttaatggttttgata 40006099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 130
Target Start/End: Complemental strand, 40006174 - 40006102
Alignment:
Q  58 tgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttg 130  Q
    |||||||||||||||||| |||||||||||||| | |||  |||||||||| ||  || || |||||||||||    
T  40006174 tgaaaccataagtatggtgtaatggttttgatagtgttctatgtgaaaccataagtatggtttaatggttttg 40006102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 17057388 - 17057423
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    |||||||||||||||||||||| |||||||||||||    
T  17057388 tactgaaaccataagtatggttgaatggttttgata 17057423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 17590837 - 17590802
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    |||||||||||||||||||||| |||||||||||||    
T  17590837 tactgaaaccataagtatggttgaatggttttgata 17590802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 86
Target Start/End: Complemental strand, 17225875 - 17225847
Alignment:
Q  58 tgaaaccataagtatggtttaatggtttt 86  Q
    |||||||||||||||||||||||||||||    
T  17225875 tgaaaccataagtatggtttaatggtttt 17225847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 1e-38; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 5077351 - 5077460
Alignment:
Q  22 aataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtcta 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||  || ||||||||||||||||||||    
T  5077351 aataatgattaagatgttatacactgaaattattactgaaaccatacttatggtttaatggttttgatagtcttctatgagaaaccaaaataattgtcta 5077450  T
Q  122 atggttttgt 131  Q
    ||| ||||||    
T  5077451 atgattttgt 5077460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 3 - 133
Target Start/End: Complemental strand, 13590649 - 13590519
Alignment:
Q  3 ttattggtacaaggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtg 102  Q
    |||||| |||| |||||||||||||||||||||||||||||||| ||||||||| |||| |||||| ||||||||||||||||||||| ||||   || |    
T  13590649 ttattgttacatggttttaaataatgattaagatgttatacactcaaattattattgaacccataattatggtttaatggttttgatagtcttatatgag 13590550  T
Q  103 aaaccaaaataattgtctaatggttttgtaa 133  Q
    | |||||||||||||| ||||||||||||||    
T  13590549 agaccaaaataattgtttaatggttttgtaa 13590519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 20372379 - 20372259
Alignment:
Q  3 ttattggtacaaggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtg 102  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||        | |||||||||||| ||||   || |    
T  20372379 ttattgttacatggttttaaataatgattaagatgttatacactgaaattattactgaaaccataa--------ttatggttttgatagtcttatatgag 20372288  T
Q  103 aaaccaaaataattgtctaatggttttgt 131  Q
    |||||||||||||||||||||||||||||    
T  20372287 aaaccaaaataattgtctaatggttttgt 20372259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 19845893 - 19845812
Alignment:
Q  52 tattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttgtaa 133  Q
    |||||| |||||||||||||||||||||||||||||||| | |||  |||||||||||| ||||||||||||||||||||||    
T  19845893 tattacagaaaccataagtatggtttaatggttttgatagtgttctatgtgaaaccaaactaattgtctaatggttttgtaa 19845812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 20481275 - 20481214
Alignment:
Q  3 ttattggtacaaggttttaaataatgattaagatgttatacactgaaattattactgaaacc 64  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20481275 ttattgttacatggttttaaataatgattaagatgttatacactgaaattattactgaaacc 20481214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 20372467 - 20372391
Alignment:
Q  53 attactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    ||||| |||||||||||||||||||||||||||||||| ||||   ||||||||||| |||||||| ||||||||||    
T  20372467 attaccgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttt 20372391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 20481363 - 20481287
Alignment:
Q  53 attactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    |||||||||||||||||||||||||||||||||||||| ||||   ||| ||||||| |||||||| ||||||||||    
T  20481363 attactgaaaccataagtatggtttaatggttttgatagtcttgtatgtaaaaccaagataattgtgtaatggtttt 20481287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 13674011 - 13673945
Alignment:
Q  65 ataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttgt 131  Q
    |||| ||||||||||||||||||||| ||||   || ||||||||||||||||||||||||||||||    
T  13674011 ataattatggtttaatggttttgatagtcttatatgagaaaccaaaataattgtctaatggttttgt 13673945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 13590737 - 13590661
Alignment:
Q  53 attactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    ||||||||||||||||||||| |||||||||||||||| ||||   |||||||| || |||||||| ||||| ||||    
T  13590737 attactgaaaccataagtatgatttaatggttttgatagtcttgtatgtgaaacgaagataattgtgtaatgatttt 13590661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 19846130 - 19846056
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    |||||||||||||||||||||||||||||||||||| | |||  ||| ||||||| ||||  || ||||||||||    
T  19846130 tactgaaaccataagtatggtttaatggttttgatagtgttctatgtaaaaccaagataagggtgtaatggtttt 19846056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 37223310 - 37223275
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  37223310 tactgaaaccataagtatggtttaatggttttgata 37223275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 37223650 - 37223615
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  37223650 tactgaaaccataagtatggtttaatggttttgata 37223615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 37223820 - 37223785
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  37223820 tactgaaaccataagtatggtttaatggttttgata 37223785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 37223990 - 37223955
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  37223990 tactgaaaccataagtatggtttaatggttttgata 37223955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 88
Target Start/End: Complemental strand, 37223480 - 37223447
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttga 88  Q
    ||||||||||||||||||||||||||||||||||    
T  37223480 tactgaaaccataagtatggtttaatggttttga 37223447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 37224160 - 37224125
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||| ||||||||    
T  37224160 tactgaaaccataagtatggtttaatgattttgata 37224125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 46
Target Start/End: Original strand, 15992414 - 15992442
Alignment:
Q  18 tttaaataatgattaagatgttatacact 46  Q
    |||||||||||||||||||||||||||||    
T  15992414 tttaaataatgattaagatgttatacact 15992442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 4e-38; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 32233173 - 32233045
Alignment:
Q  3 ttattggtacaaggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtg 102  Q
    |||||| |||| ||||||||||||||||||||||| ||||||||  ||||||||| ||||| |||| ||||||||||||||||||||| |||||  || |    
T  32233173 ttattgttacatggttttaaataatgattaagatgatatacacttgaattattaccgaaactataattatggtttaatggttttgatagtcttctatgag 32233074  T
Q  103 aaaccaaaataattgtctaatggttttgt 131  Q
    |||||||||||||||||||||||||||||    
T  32233073 aaaccaaaataattgtctaatggttttgt 32233045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 40219300 - 40219381
Alignment:
Q  52 tattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttgtaa 133  Q
    |||||||||||||||||||||||| |||||||||||||| | |||  |||||||||||| |||| |||||||||||||||||    
T  40219300 tattactgaaaccataagtatggtctaatggttttgatagtgttctatgtgaaaccaaactaatggtctaatggttttgtaa 40219381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 40219501 - 40219582
Alignment:
Q  52 tattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttgtaa 133  Q
    |||||||||||||||||||||||| |||||||||||||| | |||  |||||||||||| |||| |||||||||||||||||    
T  40219501 tattactgaaaccataagtatggtctaatggttttgatagtgttctatgtgaaaccaaactaatggtctaatggttttgtaa 40219582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 40219702 - 40219783
Alignment:
Q  52 tattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttgtaa 133  Q
    |||||||||||||||||||||||| |||||||||||||| | |||  |||||||||||| |||| |||||||||||||||||    
T  40219702 tattactgaaaccataagtatggtctaatggttttgatagtgttctatgtgaaaccaaactaatggtctaatggttttgtaa 40219783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 40219903 - 40219984
Alignment:
Q  52 tattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttgtaa 133  Q
    |||||||||||||||||||||||| |||||||||||||| | |||  |||||||||||| |||| |||||||||||||||||    
T  40219903 tattactgaaaccataagtatggtctaatggttttgatagtgttctatgtgaaaccaaactaatggtctaatggttttgtaa 40219984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 32233261 - 32233185
Alignment:
Q  53 attactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    |||||||||||||||||||||||||||||||||||||| ||||   ||||||||||| |||||||| ||||| ||||    
T  32233261 attactgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatgatttt 32233185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 41569011 - 41568914
Alignment:
Q  3 ttattggtacaaggttttaaataat----gattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttc 96  Q
    |||||| |||| | |||||||||||    ||||||||||||||||| | ||||||||||||||||| ||| |||||||||||| |||||||| |||||    
T  41569011 ttattgttacatgattttaaataatgatcgattaagatgttatacattaaaattattactgaaaccgtaattatggtttaatgattttgatagtcttc 41568914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 11974977 - 11974942
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  11974977 tactgaaaccataagtatggtttaatggttttgata 11974942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 11975147 - 11975112
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||| ||||||||||||||||    
T  11975147 tactgaaaccataagtatgatttaatggttttgata 11975112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 11975317 - 11975282
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||| ||||||||||||||||||||||||||    
T  11975317 tactgaaactataagtatggtttaatggttttgata 11975282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 11975487 - 11975452
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||| ||||||||||||||    
T  11975487 tactgaaaccataagtatggtataatggttttgata 11975452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 79; Significance: 6e-37; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 450383 - 450258
Alignment:
Q  3 ttattggtacaaggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtg 102  Q
    |||||| ||||  ||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||| |||||||| |||||  || |    
T  450383 ttattgttacattgttttaaataatgattaagatgttatacactaaaattattactgaa-ccataattatggtttaatgattttgatagtcttctatgag 450285  T
Q  103 aaaccaaaataattgtctaatggtttt 129  Q
    |||||||||||||||||||||||||||    
T  450284 aaaccaaaataattgtctaatggtttt 450258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 450471 - 450395
Alignment:
Q  53 attactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    |||||||||| |||||||||| |||||||||||||||| ||||   ||||||||||| |||||||| ||||||||||    
T  450471 attactgaaatcataagtatgatttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttt 450395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 7226 - 7354
Alignment:
Q  3 ttattggtacaaggttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatggttttgataatcttcattgtg 102  Q
    |||||| |||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||  ||||  || |    
T  7226 ttattgttacatggttttaaatagtgattaagatgttatacactgaaattattagtgaaaccataattatgatttaatggttttgatagccttctatgag 7325  T
Q  103 aaaccaaaataattgtctaatggttttgt 131  Q
    |||||||||||||| || |||||||||||    
T  7326 aaaccaaaataattatcaaatggttttgt 7354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 138
Target Start/End: Original strand, 7138 - 7222
Alignment:
Q  53 attactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttgtaataaaa 138  Q
    |||||||||||||||||||||||||||| ||||||||| ||||   ||||||||||| |||||||| |||||||||| ||||||||    
T  7138 attactgaaaccataagtatggtttaattgttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttt-taataaaa 7222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 6450 - 6371
Alignment:
Q  52 tattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttgtaa 133  Q
    ||||| ||||||||||||||||||||||||||||||||| | |||  |||||||  ||||||||| ||||||||||||||||    
T  6450 tattattgaaaccataagtatggtttaatggttttgatagtgttctatgtgaaa--aaaataattatctaatggttttgtaa 6371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 5)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 1228 - 1154
Alignment:
Q  52 tattactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggt 126  Q
    |||||| ||||||||| |||||||||||||||||||||| | |||  |||||||||||| |||||||| ||||||    
T  1228 tattacagaaaccatatgtatggtttaatggttttgatagtgttctatgtgaaaccaaactaattgtcaaatggt 1154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 1090 - 1016
Alignment:
Q  59 gaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggttttgtaa 133  Q
    ||||||||| ||||||||||||||||||||   | |||  | |||||||||| ||||||||||||||||||||||    
T  1090 gaaaccatatgtatggtttaatggttttgacggtgttctatatgaaaccaaactaattgtctaatggttttgtaa 1016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 1863 - 1789
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    ||||||||||||||||||||| |||||||||||||| | |||  ||| ||||||| ||||  || ||||||||||    
T  1863 tactgaaaccataagtatggtataatggttttgatagtgttctatgtaaaaccaatataagggtgtaatggtttt 1789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 1465 - 1391
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    ||||||||||||||||||||  |||||||||||||| | |||  ||| ||||||| ||||  || ||||||||||    
T  1465 tactgaaaccataagtatgggataatggttttgatagtgttcgatgtaaaaccaatataagggtgtaatggtttt 1391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 1664 - 1590
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgataatcttcattgtgaaaccaaaataattgtctaatggtttt 129  Q
    |||| |||||||||||||||| |||||||||||||| | |||  ||| ||||||| ||||  || ||||||||||    
T  1664 tactaaaaccataagtatggtataatggttttgatagtgttctatgtaaaaccaatataagggtgtaatggtttt 1590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0534 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 5973 - 5938
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  5973 tactgaaaccataagtatggtttaatggttttgata 5938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0534; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 8864 - 8899
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    |||||||||||||||||||||| |||||||||||||    
T  8864 tactgaaaccataagtatggttgaatggttttgata 8899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 36; Significance: 0.00000000003; HSPs: 14)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 19758 - 19723
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  19758 tactgaaaccataagtatggtttaatggttttgata 19723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 28872 - 28837
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  28872 tactgaaaccataagtatggtttaatggttttgata 28837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 31018 - 30983
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  31018 tactgaaaccataagtatggtttaatggttttgata 30983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 33393 - 33428
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  33393 tactgaaaccataagtatggtttaatggttttgata 33428  T

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Target: scaffold0144; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 33903 - 33938
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  33903 tactgaaaccataagtatggtttaatggttttgata 33938  T

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Target: scaffold0144; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 34073 - 34108
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  34073 tactgaaaccataagtatggtttaatggttttgata 34108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 88
Target Start/End: Complemental strand, 19418 - 19385
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttga 88  Q
    ||||||||||||||||||||||||||||||||||    
T  19418 tactgaaaccataagtatggtttaatggttttga 19385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 88
Target Start/End: Original strand, 34583 - 34616
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttga 88  Q
    ||||||||||||||||||||||||||||||||||    
T  34583 tactgaaaccataagtatggtttaatggttttga 34616  T

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Target: scaffold0144; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 19588 - 19553
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||| ||||||||||||||||    
T  19588 tactgaaaccataagtatgatttaatggttttgata 19553  T

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Target: scaffold0144; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 28702 - 28667
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||| ||||||||    
T  28702 tactgaaaccataagtatggtttaatgattttgata 28667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 33563 - 33598
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||| ||||||||||||||||    
T  33563 tactgaaaccataagtatgatttaatggttttgata 33598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 34243 - 34278
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    |||||||||||||||| |||||||||||||||||||    
T  34243 tactgaaaccataagtgtggtttaatggttttgata 34278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 90
Target Start/End: Complemental strand, 19921 - 19893
Alignment:
Q  62 accataagtatggtttaatggttttgata 90  Q
    |||||||||||||||||||||||||||||    
T  19921 accataagtatggtttaatggttttgata 19893  T

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Target: scaffold0144; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 34416 - 34448
Alignment:
Q  58 tgaaaccataagtatggtttaatggttttgata 90  Q
    |||||||||||||||| ||||||||||||||||    
T  34416 tgaaaccataagtatgatttaatggttttgata 34448  T

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Target: scaffold0023 (Bit Score: 36; Significance: 0.00000000003; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 126256 - 126291
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  126256 tactgaaaccataagtatggtttaatggttttgata 126291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 128579 - 128614
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||||||||||||||||||    
T  128579 tactgaaaccataagtatggtttaatggttttgata 128614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 126426 - 126461
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    |||||||||||||| |||||||||||||||||||||    
T  126426 tactgaaaccataaatatggtttaatggttttgata 126461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 133
Target Start/End: Original strand, 126601 - 126635
Alignment:
Q  99 tgtgaaaccaaaataattgtctaatggttttgtaa 133  Q
    |||||||||||| ||||||||||||||||||||||    
T  126601 tgtgaaaccaaactaattgtctaatggttttgtaa 126635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0581 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 347 - 312
Alignment:
Q  55 tactgaaaccataagtatggtttaatggttttgata 90  Q
    ||||||||||||||||||||| ||||||||||||||    
T  347 tactgaaaccataagtatggtataatggttttgata 312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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