View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17017_low_5 (Length: 362)

Name: NF17017_low_5
Description: NF17017
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17017_low_5
NF17017_low_5
[»] chr8 (40 HSPs)
chr8 (21-222)||(24501788-24501989)
chr8 (21-222)||(2704794-2704995)
chr8 (21-219)||(42938095-42938293)
chr8 (21-222)||(26374405-26374606)
chr8 (21-222)||(7506874-7507075)
chr8 (23-222)||(42735252-42735451)
chr8 (21-222)||(42937383-42937582)
chr8 (21-222)||(5576595-5576797)
chr8 (21-215)||(23115152-23115344)
chr8 (22-218)||(10392217-10392412)
chr8 (21-222)||(41479127-41479318)
chr8 (29-222)||(43959695-43959878)
chr8 (21-203)||(10295374-10295557)
chr8 (68-205)||(4403184-4403321)
chr8 (21-203)||(14782129-14782311)
chr8 (21-203)||(44725804-44725986)
chr8 (21-205)||(9288449-9288633)
chr8 (21-205)||(43166682-43166866)
chr8 (21-203)||(18958721-18958903)
chr8 (21-203)||(19717875-19718057)
chr8 (28-205)||(26856104-26856281)
chr8 (21-205)||(39467460-39467644)
chr8 (70-219)||(4949995-4950143)
chr8 (21-205)||(32497555-32497729)
chr8 (71-205)||(39189808-39189940)
chr8 (21-205)||(18305963-18306137)
chr8 (21-121)||(32711358-32711458)
chr8 (21-205)||(7466365-7466539)
chr8 (21-205)||(16362226-16362400)
chr8 (63-205)||(37857191-37857323)
chr8 (71-222)||(13478226-13478376)
chr8 (21-121)||(31623725-31623825)
chr8 (21-203)||(42305789-42305961)
chr8 (134-207)||(9770430-9770503)
chr8 (69-177)||(8410416-8410526)
chr8 (21-121)||(4031334-4031434)
chr8 (148-205)||(31623832-31623889)
chr8 (145-186)||(32711305-32711346)
chr8 (68-112)||(41070022-41070066)
chr8 (134-178)||(4031297-4031341)
[»] chr7 (63 HSPs)
chr7 (21-222)||(18914710-18914911)
chr7 (21-219)||(7719238-7719436)
chr7 (21-222)||(973215-973416)
chr7 (21-222)||(40996624-40996825)
chr7 (21-222)||(43581065-43581266)
chr7 (22-222)||(30440828-30441028)
chr7 (24-222)||(34695307-34695505)
chr7 (21-215)||(7718345-7718538)
chr7 (25-222)||(47879203-47879400)
chr7 (25-222)||(47914301-47914498)
chr7 (21-219)||(44343374-44343572)
chr7 (21-222)||(39219352-39219552)
chr7 (21-222)||(34009043-34009245)
chr7 (21-219)||(12893439-12893639)
chr7 (21-222)||(20275238-20275439)
chr7 (21-219)||(32142895-32143095)
chr7 (67-222)||(7113529-7113684)
chr7 (28-221)||(10068498-10068689)
chr7 (21-203)||(23101322-23101504)
chr7 (21-205)||(3022950-3023134)
chr7 (21-205)||(9882229-9882412)
chr7 (21-205)||(18838413-18838597)
chr7 (21-205)||(28034797-28034981)
chr7 (21-203)||(28342371-28342553)
chr7 (21-203)||(39784123-39784305)
chr7 (21-191)||(29614770-29614940)
chr7 (21-205)||(8675357-8675541)
chr7 (21-205)||(33382661-33382845)
chr7 (67-168)||(43679491-43679592)
chr7 (69-205)||(43187349-43187485)
chr7 (21-205)||(7993166-7993350)
chr7 (63-202)||(12740439-12740577)
chr7 (63-222)||(12963767-12963919)
chr7 (24-204)||(9179907-9180077)
chr7 (25-130)||(31638910-31639015)
chr7 (28-205)||(44256758-44256935)
chr7 (21-205)||(46405433-46405607)
chr7 (68-220)||(1470213-1470362)
chr7 (72-203)||(19810874-19810995)
chr7 (21-205)||(40460709-40460883)
chr7 (21-205)||(3797059-3797233)
chr7 (83-205)||(37972859-37972981)
chr7 (64-179)||(727587-727692)
chr7 (68-167)||(25805763-25805862)
chr7 (98-205)||(41827405-41827512)
chr7 (21-203)||(509680-509852)
chr7 (29-163)||(32883814-32883948)
chr7 (21-205)||(44121902-44122076)
chr7 (21-202)||(19251563-19251734)
chr7 (21-154)||(10676463-10676596)
chr7 (21-205)||(37327951-37328125)
chr7 (21-188)||(33892269-33892426)
chr7 (103-221)||(10617024-10617141)
chr7 (69-205)||(29585586-29585712)
chr7 (171-222)||(31639031-31639082)
chr7 (21-188)||(44623295-44623452)
chr7 (21-132)||(39028121-39028232)
chr7 (68-127)||(447854-447913)
chr7 (63-121)||(47066770-47066828)
chr7 (68-121)||(17001099-17001152)
chr7 (134-191)||(17001049-17001106)
chr7 (22-51)||(8078428-8078457)
chr7 (134-191)||(47066821-47066878)
[»] chr6 (20 HSPs)
chr6 (21-222)||(6197453-6197654)
chr6 (21-222)||(1391653-1391854)
chr6 (21-222)||(2300714-2300914)
chr6 (21-222)||(28002694-28002895)
chr6 (21-203)||(29076627-29076810)
chr6 (21-203)||(29111600-29111784)
chr6 (29-203)||(31895733-31895907)
chr6 (21-204)||(7051874-7052057)
chr6 (29-205)||(34759042-34759218)
chr6 (21-205)||(7497105-7497288)
chr6 (21-205)||(14262425-14262609)
chr6 (21-191)||(34773438-34773608)
chr6 (68-203)||(31067569-31067694)
chr6 (63-205)||(30385061-30385191)
chr6 (21-139)||(656994-657101)
chr6 (149-221)||(2238668-2238741)
chr6 (83-203)||(4200431-4200541)
chr6 (170-222)||(657114-657165)
chr6 (159-197)||(11113733-11113771)
chr6 (68-112)||(3848286-3848330)
[»] chr4 (64 HSPs)
chr4 (21-222)||(25331160-25331361)
chr4 (25-222)||(30009653-30009850)
chr4 (21-220)||(1044836-1045035)
chr4 (21-208)||(1112922-1113109)
chr4 (21-222)||(22202044-22202245)
chr4 (25-222)||(34228559-34228756)
chr4 (21-222)||(41881056-41881260)
chr4 (25-222)||(55302876-55303077)
chr4 (21-221)||(39479332-39479534)
chr4 (21-222)||(12112974-12113176)
chr4 (25-222)||(32950811-32951009)
chr4 (21-222)||(42786713-42786913)
chr4 (25-222)||(7007407-7007605)
chr4 (24-222)||(37046425-37046626)
chr4 (35-220)||(41320853-41321038)
chr4 (22-222)||(3436623-3436823)
chr4 (21-222)||(24130957-24131149)
chr4 (21-222)||(46635624-46635819)
chr4 (22-169)||(25446080-25446227)
chr4 (37-221)||(31314719-31314893)
chr4 (21-168)||(28541727-28541874)
chr4 (21-222)||(53275868-53276069)
chr4 (21-203)||(5441433-5441615)
chr4 (21-203)||(27768085-27768267)
chr4 (21-203)||(54341173-54341355)
chr4 (29-205)||(54853461-54853637)
chr4 (66-215)||(27454061-27454210)
chr4 (21-222)||(40537136-40537322)
chr4 (25-177)||(19740929-19741081)
chr4 (21-205)||(51320950-51321134)
chr4 (63-168)||(7249795-7249900)
chr4 (21-203)||(37828397-37828579)
chr4 (21-205)||(37915856-37916040)
chr4 (63-203)||(48261198-48261338)
chr4 (21-205)||(32322120-32322304)
chr4 (21-218)||(39307234-39307430)
chr4 (30-154)||(23464993-23465117)
chr4 (22-141)||(25504696-25504815)
chr4 (21-203)||(9163105-9163279)
chr4 (69-189)||(44770862-44770982)
chr4 (104-222)||(8711978-8712094)
chr4 (69-205)||(56445348-56445474)
chr4 (21-205)||(23987243-23987417)
chr4 (104-205)||(24736447-24736548)
chr4 (28-203)||(30967304-30967469)
chr4 (69-205)||(12913301-12913427)
chr4 (21-134)||(29649731-29649844)
chr4 (123-222)||(11090435-11090532)
chr4 (63-191)||(41725196-41725321)
chr4 (22-205)||(49501512-49501687)
chr4 (22-205)||(49507577-49507752)
chr4 (21-205)||(28483928-28484101)
chr4 (83-189)||(20021424-20021531)
chr4 (21-221)||(36479221-36479408)
chr4 (69-154)||(28371001-28371086)
chr4 (63-205)||(5800049-5800181)
chr4 (23-121)||(49834890-49834988)
chr4 (63-192)||(41581795-41581923)
chr4 (134-205)||(32684001-32684072)
chr4 (63-121)||(32684065-32684123)
chr4 (134-205)||(49834826-49834897)
chr4 (63-188)||(50018322-50018437)
chr4 (188-222)||(25446224-25446258)
chr4 (172-221)||(49469411-49469459)
[»] chr3 (63 HSPs)
chr3 (21-222)||(3206181-3206382)
chr3 (21-222)||(10139122-10139323)
chr3 (21-222)||(20498238-20498439)
chr3 (21-222)||(996062-996263)
chr3 (21-222)||(19253856-19254057)
chr3 (21-219)||(3999624-3999822)
chr3 (22-222)||(37820453-37820653)
chr3 (21-222)||(6589593-6589795)
chr3 (21-222)||(29448833-29449035)
chr3 (21-222)||(35337764-35337963)
chr3 (21-200)||(33807796-33807976)
chr3 (21-222)||(25418395-25418595)
chr3 (22-218)||(54625622-54625818)
chr3 (24-222)||(40246876-40247073)
chr3 (21-222)||(53929104-53929305)
chr3 (29-222)||(44762011-44762206)
chr3 (21-192)||(33996547-33996718)
chr3 (21-222)||(52114557-52114759)
chr3 (21-205)||(17946317-17946501)
chr3 (21-222)||(6035031-6035230)
chr3 (110-222)||(6131210-6131321)
chr3 (22-183)||(51699495-51699655)
chr3 (21-205)||(18749641-18749825)
chr3 (21-205)||(40897173-40897357)
chr3 (21-205)||(44906506-44906690)
chr3 (21-203)||(36674125-36674307)
chr3 (68-205)||(54628920-54629057)
chr3 (21-190)||(29030035-29030203)
chr3 (21-203)||(11431555-11431737)
chr3 (21-203)||(34484025-34484207)
chr3 (63-203)||(32580247-32580387)
chr3 (21-205)||(26107290-26107474)
chr3 (24-143)||(1440007-1440126)
chr3 (69-203)||(5825139-5825273)
chr3 (28-205)||(52810414-52810591)
chr3 (21-205)||(48379186-48379370)
chr3 (21-205)||(51737719-51737903)
chr3 (23-163)||(22057793-22057933)
chr3 (68-205)||(31646279-31646414)
chr3 (98-222)||(1439869-1439994)
chr3 (27-203)||(27899379-27899545)
chr3 (63-203)||(50903235-50903375)
chr3 (21-205)||(52617964-52618142)
chr3 (64-222)||(52079999-52080142)
chr3 (21-187)||(20833021-20833187)
chr3 (21-205)||(10728644-10728818)
chr3 (21-205)||(37454890-37455064)
chr3 (63-205)||(39842487-39842619)
chr3 (63-205)||(50762053-50762185)
chr3 (72-166)||(55235264-55235359)
chr3 (21-205)||(39038069-39038243)
chr3 (21-205)||(44276418-44276588)
chr3 (145-200)||(33807678-33807733)
chr3 (21-132)||(10660564-10660675)
chr3 (21-121)||(23753463-23753563)
chr3 (134-205)||(45862983-45863054)
chr3 (21-126)||(539476-539581)
chr3 (123-203)||(15492862-15492942)
chr3 (63-180)||(6975817-6975924)
chr3 (134-203)||(23753402-23753470)
chr3 (135-190)||(12103733-12103789)
chr3 (24-119)||(23535890-23535984)
chr3 (24-52)||(6131317-6131345)
[»] chr2 (35 HSPs)
chr2 (21-222)||(31170602-31170803)
chr2 (21-222)||(16269722-16269923)
chr2 (21-222)||(20605267-20605468)
chr2 (21-222)||(24776386-24776586)
chr2 (21-222)||(14198555-14198756)
chr2 (21-222)||(305443-305644)
chr2 (21-222)||(12407411-12407612)
chr2 (21-222)||(43847677-43847878)
chr2 (21-221)||(5093025-5093226)
chr2 (21-222)||(35317093-35317294)
chr2 (21-222)||(22551741-22551942)
chr2 (21-222)||(9120157-9120358)
chr2 (21-222)||(44765806-44765998)
chr2 (21-222)||(1789473-1789676)
chr2 (25-222)||(32125285-32125486)
chr2 (28-205)||(10657444-10657621)
chr2 (21-205)||(28844586-28844770)
chr2 (21-205)||(33135654-33135837)
chr2 (21-205)||(25288190-25288374)
chr2 (21-203)||(18177298-18177480)
chr2 (63-203)||(26788859-26788996)
chr2 (21-205)||(28740288-28740462)
chr2 (21-222)||(26601191-26601379)
chr2 (80-203)||(43078653-43078776)
chr2 (72-205)||(10125295-10125418)
chr2 (21-203)||(3463703-3463875)
chr2 (30-205)||(13833427-13833592)
chr2 (21-132)||(7026635-7026746)
chr2 (21-121)||(3574878-3574978)
chr2 (69-205)||(379016-379142)
chr2 (21-105)||(215320-215404)
chr2 (134-205)||(6224562-6224633)
chr2 (158-205)||(215233-215280)
chr2 (156-203)||(7027053-7027100)
chr2 (63-121)||(6224626-6224684)
[»] scaffold0400 (1 HSPs)
scaffold0400 (21-222)||(15009-15210)
[»] scaffold0365 (1 HSPs)
scaffold0365 (21-222)||(15652-15853)
[»] scaffold0151 (1 HSPs)
scaffold0151 (21-222)||(38581-38781)
[»] chr5 (26 HSPs)
chr5 (21-219)||(21147097-21147294)
chr5 (21-222)||(7016714-7016915)
chr5 (21-222)||(33656017-33656217)
chr5 (21-222)||(5272894-5273095)
chr5 (21-222)||(27458925-27459125)
chr5 (21-222)||(849177-849370)
chr5 (21-222)||(32157869-32158074)
chr5 (25-221)||(139307-139504)
chr5 (21-205)||(1152095-1152279)
chr5 (21-203)||(14000099-14000281)
chr5 (26-219)||(9689693-9689884)
chr5 (23-203)||(4550251-4550431)
chr5 (21-205)||(13925961-13926145)
chr5 (21-203)||(39852375-39852557)
chr5 (21-205)||(7947565-7947749)
chr5 (29-222)||(6460830-6461008)
chr5 (21-204)||(22746327-22746502)
chr5 (21-205)||(4240454-4240628)
chr5 (27-157)||(14465267-14465397)
chr5 (68-205)||(5949185-5949312)
chr5 (21-219)||(9220696-9220883)
chr5 (21-205)||(1461140-1461314)
chr5 (21-203)||(40013706-40013878)
chr5 (21-121)||(37013944-37014044)
chr5 (148-205)||(37014051-37014108)
chr5 (21-55)||(16894044-16894078)
[»] chr1 (48 HSPs)
chr1 (21-222)||(19451784-19451985)
chr1 (21-222)||(50192526-50192728)
chr1 (21-222)||(21222170-21222371)
chr1 (25-222)||(45759985-45760182)
chr1 (24-222)||(49198245-49198442)
chr1 (21-222)||(28824349-28824549)
chr1 (25-222)||(47780738-47780935)
chr1 (21-222)||(47654327-47654529)
chr1 (21-221)||(6304227-6304430)
chr1 (21-207)||(35279695-35279881)
chr1 (24-211)||(45535970-45536163)
chr1 (25-203)||(49418111-49418289)
chr1 (22-222)||(35679102-35679304)
chr1 (21-222)||(29556127-29556328)
chr1 (68-221)||(31572174-31572327)
chr1 (22-221)||(32588936-32589129)
chr1 (21-205)||(48177455-48177639)
chr1 (21-208)||(37014630-37014817)
chr1 (21-203)||(6312597-6312779)
chr1 (21-203)||(29396383-29396565)
chr1 (21-203)||(25612180-25612362)
chr1 (21-203)||(51701603-51701785)
chr1 (63-221)||(9577411-9577567)
chr1 (22-222)||(33025536-33025726)
chr1 (68-203)||(15835048-15835183)
chr1 (21-163)||(730171-730314)
chr1 (21-190)||(46328065-46328234)
chr1 (68-203)||(9322495-9322630)
chr1 (25-169)||(48524346-48524490)
chr1 (21-203)||(28387388-28387570)
chr1 (28-205)||(38536092-38536259)
chr1 (28-205)||(38558310-38558477)
chr1 (68-205)||(48668778-48668905)
chr1 (21-205)||(29219309-29219483)
chr1 (21-187)||(5495117-5495273)
chr1 (161-221)||(48524805-48524865)
chr1 (71-130)||(955823-955882)
chr1 (21-121)||(18798514-18798614)
chr1 (71-121)||(31622536-31622586)
chr1 (21-112)||(49230909-49231000)
chr1 (63-219)||(51085860-51086014)
chr1 (21-85)||(22183393-22183457)
chr1 (134-203)||(18798607-18798676)
chr1 (95-190)||(38320003-38320098)
chr1 (21-205)||(45272609-45272782)
chr1 (171-222)||(730307-730357)
chr1 (21-121)||(47784410-47784509)
chr1 (21-55)||(953842-953876)
[»] scaffold0004 (1 HSPs)
scaffold0004 (21-220)||(102125-102324)
[»] scaffold0113 (1 HSPs)
scaffold0113 (21-222)||(38872-39072)
[»] scaffold0037 (1 HSPs)
scaffold0037 (21-222)||(100241-100444)
[»] scaffold0276 (1 HSPs)
scaffold0276 (24-203)||(534-713)
[»] scaffold0543 (1 HSPs)
scaffold0543 (68-203)||(10637-10772)
[»] scaffold0042 (1 HSPs)
scaffold0042 (68-205)||(58069-58206)
[»] scaffold0110 (1 HSPs)
scaffold0110 (68-205)||(39610-39747)
[»] scaffold0054 (1 HSPs)
scaffold0054 (21-200)||(36905-37084)
[»] scaffold1504 (1 HSPs)
scaffold1504 (63-203)||(936-1075)
[»] scaffold0306 (1 HSPs)
scaffold0306 (28-205)||(13919-14086)
[»] scaffold0152 (2 HSPs)
scaffold0152 (28-205)||(21241-21408)
scaffold0152 (157-205)||(28508-28556)
[»] scaffold0347 (1 HSPs)
scaffold0347 (123-205)||(14892-14974)
[»] scaffold0839 (1 HSPs)
scaffold0839 (95-205)||(3685-3795)
[»] scaffold0922 (1 HSPs)
scaffold0922 (21-128)||(4230-4337)
[»] scaffold0007 (1 HSPs)
scaffold0007 (71-155)||(199905-199989)


Alignment Details
Target: chr8 (Bit Score: 161; Significance: 8e-86; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 24501989 - 24501788
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  24501989 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 24501890  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24501889 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 24501790  T
Q  221 ta 222  Q
    ||    
T  24501789 ta 24501788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 2704995 - 2704794
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  2704995 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcaaatttt 2704896  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2704895 gatggattttgtgggattttctagtgatattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 2704796  T
Q  221 ta 222  Q
    ||    
T  2704795 ta 2704794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 21 - 219
Target Start/End: Complemental strand, 42938293 - 42938095
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  42938293 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 42938194  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagatttta 219  Q
    ||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  42938193 gatggattttgtgggattttctagtgaaattttagcctgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagatttta 42938095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 26374606 - 26374405
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||    
T  26374606 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaataagatttt 26374507  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  26374506 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaaaattttac 26374407  T
Q  221 ta 222  Q
    ||    
T  26374406 ta 26374405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 7507075 - 7506874
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       |||||||||||||||||| |||||||||||  || |||||||||||||||||||||||    
T  7507075 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaccattcaaattttgaaggattgtttaataaatcagatttt 7506976  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  7506975 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgtaaacatgagatttcttaggattgtttttttcttttaagattttac 7506876  T
Q  221 ta 222  Q
    ||    
T  7506875 ta 7506874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 23 - 222
Target Start/End: Complemental strand, 42735451 - 42735252
Alignment:
Q  23 cttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttga 122  Q
    ||||||||||||||| |||||||||||||||||       ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||    
T  42735451 cttgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaagtattgtttaataaatcagattttga 42735352  T
Q  123 tggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttacta 222  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42735351 tggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcataaaaacatgagatttcttaggattgtttttttcttttaagattttacta 42735252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 42937383 - 42937582
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    ||||||||||||||||||  |||||||||||||||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  42937383 gtcttgtggtattcaatc--gactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 42937480  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  42937481 gatggattttgtgggattttctagtgaaattttagcattaaaaagtctttcatgaaaacatgagatttcttatgattgtttttttcttttaagattttac 42937580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 5576797 - 5576595
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattt 119  Q
    |||||||||||||||||||||||||||||||||||        ||| ||||||||||||||||||||||||||| ||  ||||||||||||| |||||||    
T  5576797 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtcaagtggtattcaaaatcattcaaatttcgaagaattgtttaataaaccagattt 5576698  T
Q  120 tgatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagatttta 219  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||    
T  5576697 tgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttccttttaagatttta 5576598  T
Q  220 cta 222  Q
    |||    
T  5576597 cta 5576595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 23115344 - 23115152
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||| ||||||||||||  || |||||||||||||||||||||||    
T  23115344 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa-tcattcaaatttggaaggattgtttaataaatcagatttt 23115246  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagat 215  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  23115245 gatggattttgtgggattttctaatgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttaggattgttttt-tcttttaagat 23115152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 22 - 218
Target Start/End: Complemental strand, 10392412 - 10392217
Alignment:
Q  22 tcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttg 121  Q
    ||||||| ||||||||||||||| ||||||||||       ||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||    
T  10392412 tcttgtgatattcaatcaagacttttaatcacttaagaaaagtctagtggtattcagaatcattcaaatttcgaaggattgtttaataaatcagattttg 10392313  T
Q  122 atggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagatttt 218  Q
    |||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||| |||||||| ||||| ||||||||||||||    
T  10392312 atggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttattaggatt-tttttttcttttaagatttt 10392217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 41479127 - 41479318
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||      
T  41479127 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagatt-- 41479224  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
            ||||||||||||||| | ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41479225 --------ttgtgggattttctagtaaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 41479316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 43959695 - 43959878
Alignment:
Q  29 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggatt 128  Q
    |||||||||||||| ||||||||||||       | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  43959695 gtattcaatcaagattcttaatcacttcaaaaaagactagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 43959794  T
Q  129 ttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttacta 222  Q
    ||||||          ||||||||||||| |||||||||||| || |||||||||||||||||| |||||||||| ||||||||||||||||||    
T  43959795 ttgtgg----------tgaaattttagcatgaaaaagtctttaattaaaacatgagatttcttatgattgtttttttcttttaagattttacta 43959878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 21 - 203
Target Start/End: Complemental strand, 10295557 - 10295374
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  10295557 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 10295458  T
Q  121 gatggatttt-gtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||| |||||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  10295457 gatggatttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 10295374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 68 - 205
Target Start/End: Original strand, 4403184 - 4403321
Alignment:
Q  68 gtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtc 167  Q
    |||||||||||||||||||||||||| || |||||||||||||||  | |||||||||||||||||||||||| || || ||||||| ||||||||||||    
T  4403184 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagtc 4403283  T
Q  168 tttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  4403284 tttcatgaaaatatgagatttcttgggattgtttttct 4403321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 21 - 203
Target Start/End: Complemental strand, 14782311 - 14782129
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||  || |||||||||||||||  ||||||    
T  14782311 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggatttt 14782212  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  14782211 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 14782129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 21 - 203
Target Start/End: Complemental strand, 44725986 - 44725804
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||  || |||||||||||||||  ||||||    
T  44725986 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggatttt 44725887  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  44725886 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 44725804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 9288633 - 9288449
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||| | | || |||||||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  9288633 gtcttgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 9288534  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||| ||||||||||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  9288533 gatgaattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttct 9288449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 43166866 - 43166682
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||  ||| ||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  43166866 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 43166767  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||||||||||| |  || ||||||| ||||||||||| ||||||||||| ||||||||||||  ||||| ||||||    
T  43166766 gatggattttgtgggattttgttgtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttcttgagattggttttct 43166682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 21 - 203
Target Start/End: Complemental strand, 18958903 - 18958721
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  18958903 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 18958804  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
     ||||||||||||||||||| || || ||||||| ||||||||||||||||||||||| || |||||| ||  ||||||||||    
T  18958803 aatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagattagattttttgagattgttttt 18958721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 21 - 203
Target Start/End: Complemental strand, 19718057 - 19717875
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||| ||  ||||||||||||||  ||||||    
T  19718057 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaagaattgtttaataaattggatttt 19717958  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
     ||||||||||||||||||| || || ||||||| ||||||||||||||| ||||||| ||||||||||||  ||||||||||    
T  19717957 aatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttcttgagattgttttt 19717875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 28 - 205
Target Start/End: Original strand, 26856104 - 26856281
Alignment:
Q  28 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggat 127  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| ||  ||||||||||||||  |||||||||||||    
T  26856104 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaagtattgtttaataaattggattttgatggat 26856203  T
Q  128 tttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    ||||||||||||| || || ||||||| |||||||||||||||||  |||| || |||||||||  ||||||||||||    
T  26856204 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcagaaaaaaataagatttcttgagattgtttttct 26856281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 39467644 - 39467460
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||| || |||||||||||||||   |||||    
T  39467644 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaatttt 39467545  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||| ||||||||| || || ||||||| ||||||||| ||||||||||||| ||||||||| ||  ||||||||||||    
T  39467544 gatggattttatgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagattttttgagattgtttttct 39467460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 70 - 219
Target Start/End: Complemental strand, 4950143 - 4949995
Alignment:
Q  70 ggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtctt 169  Q
    ||||||||||||||||||| ||||||| |||| |||||||||| ||||||||||||| ||||||| |||||||| ||||||||||||| |||||| | ||    
T  4950143 ggtattcaaaatcattcaagtttcaaaagattatttaataaattagattttgatggaatttgtggaattttctagtgaaattttagcatgaaaaaatatt 4950044  T
Q  170 tcatgaaaacatgagatttcttaggattgtttttctcttttaagatttta 219  Q
    ||||| |||||| ||||||||||  ||||||||| |||||||| ||||||    
T  4950043 tcatgcaaacataagatttcttaaaattgttttt-tcttttaaaatttta 4949995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 32497555 - 32497729
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| ||||||||||||||||||            
T  32497555 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaat-------- 32497646  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
      |||||||||||||||||| || || ||||||| ||||| ||||||||||||||||| ||||||||||||  ||||||||||||    
T  32497647 --tggattttgtgggattttgtagtgtaattttaacaagagaaagtctttcatgaaaagatgagatttcttgagattgtttttct 32497729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 71 - 205
Target Start/End: Complemental strand, 39189940 - 39189808
Alignment:
Q  71 gtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtcttt 170  Q
    |||||||| |||||||||||||| || |||||||||||||||  || ||||||||||||||  | |||||||| | |||||||| ||||||||| |||||    
T  39189940 gtattcaacatcattcaaatttcgaaggattgtttaataaatt-gaatttgatggattttgatgaattttctagt-aaattttaacaagaaaaaatcttt 39189843  T
Q  171 catgaaaacatgagatttcttaggattgtttttct 205  Q
    ||||||||||||||||||||| |||||||||||||    
T  39189842 catgaaaacatgagatttcttgggattgtttttct 39189808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 18306137 - 18305963
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||| || |||||||||||||||            
T  18306137 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaat-------- 18306046  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
      |||||||||||||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||| ||||    
T  18306045 --tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttattct 18305963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 32711458 - 32711358
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  32711458 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagatttt 32711359  T
Q  121 g 121  Q
    |    
T  32711358 g 32711358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 7466365 - 7466539
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || ||| |||       |||| |||||||||||||||||||||||||  ||  ||||||||||||||            
T  7466365 gtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaagaattgtttaataaat-------- 7466456  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
      |||||||||||||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  7466457 --tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttct 7466539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 16362226 - 16362400
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || || ||||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  16362226 gtcttgaggtattcaatcaagacttttcattacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 16362325  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||          || || ||||||| ||||||||| ||||| || |||| ||||||||||||  ||||||||||||    
T  16362326 gatggattttg----------tagtgtaattttaacaagaaaaaatcttttataaaaagatgagatttcttgagattgtttttct 16362400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 63 - 205
Target Start/End: Original strand, 37857191 - 37857323
Alignment:
Q  63 gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaa 162  Q
    |||| |||||||||||| |||||||||||| ||| |||||||||||||||  |||||||||||||||||          || || ||||| | |||||||    
T  37857191 gtcttgtggtattcaaattcattcaaattttaaaggattgtttaataaattggattttgatggattttg----------tagtgtaatttgaacaagaaa 37857280  T
Q  163 aagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    || ||||||||||||| ||||||||||||  ||||||||||||    
T  37857281 aaatctttcatgaaaagatgagatttcttgagattgtttttct 37857323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 13478376 - 13478226
Alignment:
Q  71 gtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtcttt 170  Q
    |||||||||||| || ||||||| || ||||||||||||||| |||||| | |||||||||| ||||||| ||   ||||||||||| || |||||||||    
T  13478376 gtattcaaaatcttttaaatttcgaaggattgtttaataaattagatttcgttggattttgtaggattttttagctaaattttagcatgataaagtcttt 13478277  T
Q  171 catg-aaaacatgagatttcttaggattgtttttctcttttaagattttacta 222  Q
     ||| ||||||| |||||| |||  |   ||||| ||||||||||||||||||    
T  13478276 tatgaaaaacataagattttttataa--ctttttttcttttaagattttacta 13478226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 31623725 - 31623825
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  31623725 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 31623824  T
Q  121 g 121  Q
    |    
T  31623825 g 31623825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 21 - 203
Target Start/End: Complemental strand, 42305961 - 42305789
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||        ||| |||||||||||||| ||||||||||| || ||||||||||| |||  ||||||    
T  42305961 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaataattcaaatttcgaaggattgtttaatcaattggatttt 42305862  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
     ||||||||||| |          || ||||||| |||||||||||| |||||||||| ||||||||||||  ||||||||||    
T  42305861 aatggattttgtag----------tgtaattttaacaagaaaaagtcattcatgaaaaaatgagatttcttgagattgttttt 42305789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 9770503 - 9770430
Alignment:
Q  134 ggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctct 207  Q
    ||||||||||||||||||||| ||  ||||| | |||||| |||||||||||||||||||||||| ||||||||    
T  9770503 ggattttctaatgaaattttaacataaaaaaatatttcatcaaaacatgagatttcttaggattgcttttctct 9770430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 8410526 - 8410416
Alignment:
Q  69 tggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtggga--ttttctaatgaaattttagcaagaaaaagt 166  Q
    ||||||||||||||||| ||||||  || ||||||||| |||||  || |||||||||||||||||||  |||| || ||||||||||| | || |||||    
T  8410526 tggtattcaaaatcattgaaatttggaaggattgtttactaaattggactttgatggattttgtgggattttttttagtgaaattttagtatgacaaagt 8410427  T
Q  167 ctttcatgaaa 177  Q
    |||||| ||||    
T  8410426 ctttcacgaaa 8410416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 4031434 - 4031334
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || || | ||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  4031434 gtcttgaggtattcaatcaagacttttcataaattaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 4031335  T
Q  121 g 121  Q
    |    
T  4031334 g 4031334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 31623832 - 31623889
Alignment:
Q  148 aattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    ||||||| ||||||||||| ||||||||||| || |||||||||  ||||||||||||    
T  31623832 aattttaacaagaaaaagtttttcatgaaaagataagatttcttgagattgtttttct 31623889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 186
Target Start/End: Complemental strand, 32711346 - 32711305
Alignment:
Q  145 tgaaattttagcaagaaaaagtctttcatgaaaacatgagat 186  Q
    ||||||||||||| |||||||||||||||||||||| |||||    
T  32711346 tgaaattttagcatgaaaaagtctttcatgaaaacaagagat 32711305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 41070022 - 41070066
Alignment:
Q  68 gtggtattcaaaatcattcaaatttcaaatgattgtttaataaat 112  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||    
T  41070022 gtggtatttaaaatcattccaatttcaaatgattgtttgataaat 41070066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 4031341 - 4031297
Alignment:
Q  134 ggattttctaatgaaattttagcaagaaaaagtctttcatgaaaa 178  Q
    ||||||| || || ||||||| |||||||||||||||||||||||    
T  4031341 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 4031297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 161; Significance: 8e-86; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 18914911 - 18914710
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  18914911 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaaggtttgtttaataaatcagatttt 18914812  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18914811 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 18914712  T
Q  221 ta 222  Q
    ||    
T  18914711 ta 18914710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 21 - 219
Target Start/End: Complemental strand, 7719436 - 7719238
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7719436 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 7719337  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagatttta 219  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7719336 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagatttta 7719238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 973215 - 973416
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||        | |||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  973215 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatttagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 973314  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  973315 gatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 973414  T
Q  221 ta 222  Q
    ||    
T  973415 ta 973416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 40996825 - 40996624
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    ||||||||||||||||||||||||||||||| |||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  40996825 gtcttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 40996726  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    |||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  40996725 gatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 40996626  T
Q  221 ta 222  Q
    ||    
T  40996625 ta 40996624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 43581266 - 43581065
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    ||||||| |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  43581266 gtcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 43581167  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  43581166 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattatttttttcttttaagattttac 43581067  T
Q  221 ta 222  Q
    ||    
T  43581066 ta 43581065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 30440828 - 30441028
Alignment:
Q  22 tcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttg 121  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  30440828 tcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 30440927  T
Q  122 atggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttact 221  Q
    |||||||||||||||||||||| ||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  30440928 atggattttgtgggattttctagtgaaattttagtatgaaaaagtctttcgtgaaaacatgagatttcttaggattgtttttttcttttaagattttact 30441027  T
Q  222 a 222  Q
    |    
T  30441028 a 30441028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 24 - 222
Target Start/End: Original strand, 34695307 - 34695505
Alignment:
Q  24 ttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgat 123  Q
    ||||||||||||||||||||||||||||||||       ||| |||||||||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  34695307 ttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagattttgat 34695406  T
Q  124 ggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttacta 222  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  34695407 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 34695505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 7718538 - 7718345
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  7718538 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 7718439  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagat 215  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7718438 gatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattgttttt-tcttttaagat 7718345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 25 - 222
Target Start/End: Original strand, 47879203 - 47879400
Alignment:
Q  25 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatg 124  Q
    |||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  47879203 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttaaaaggattgtttaataaatcagattttgatg 47879302  T
Q  125 gattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttacta 222  Q
    |||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  47879303 gattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttttcttttaagattttacta 47879400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 25 - 222
Target Start/End: Original strand, 47914301 - 47914498
Alignment:
Q  25 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatg 124  Q
    |||||||||||||||||||||||||||||||       |||||||| |||||||||||||||||||||| || ||||||||||||||| |||||||||||    
T  47914301 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaataagattttgatg 47914400  T
Q  125 gattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttacta 222  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  47914401 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttttcttttaagattttacta 47914498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 21 - 219
Target Start/End: Complemental strand, 44343572 - 44343374
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||| ||||||||||||||||||||||||||       || |||||||||| ||||||||||||||||| || |||||||||||||||||||||||    
T  44343572 gtcttgtgatattcaatcaagactcttaatcacttaaaaaaagtttagtggtatttaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 44343473  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagatttta 219  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  44343472 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcacgaaaacatgagatttcttaggattgtttttttcttttaagatttta 44343374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 39219552 - 39219352
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||| ||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||  | ||||||||||||||||||||||||    
T  39219552 gtcttgtgttattcaatcaagactcttaatcacttaaaaaaagtctattggtattcaaaatcattcaaattttga-tgattgtttaataaatcagatttt 39219454  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  39219453 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattgtttttttcttttaagattttac 39219354  T
Q  221 ta 222  Q
    ||    
T  39219353 ta 39219352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 34009043 - 34009245
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtc-tagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattt 119  Q
    |||||||||||||||||||| ||||||||||||||       ||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  34009043 gtcttgtggtattcaatcaacactcttaatcacttaaaaaaagtcctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattt 34009142  T
Q  120 tgatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagatttta 219  Q
    ||||||||||||||| |||||||||| |||||||||||  ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  34009143 tgatggattttgtggaattttctaataaaattttagcataaaaaagtctttcaagaaaacatgagatttcttaggattgtttttttcttttaagatttta 34009242  T
Q  220 cta 222  Q
    |||    
T  34009243 cta 34009245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 21 - 219
Target Start/End: Original strand, 12893439 - 12893639
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    ||||||||||||| |||||||||||||||||||||       ||||| ||||||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  12893439 gtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagatttt 12893538  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattg--tttttctcttttaagatttt 218  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||    
T  12893539 gatggattttgtgagattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttttcttttaagatttt 12893638  T
Q  219 a 219  Q
    |    
T  12893639 a 12893639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 20275439 - 20275238
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    ||||| |||||||||||||||||||||||||||||       ||||  ||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  20275439 gtcttatggtattcaatcaagactcttaatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 20275340  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    |||||||||||||||||||| || ||||||||||||| |||||||||| |||||||| ||||||||||||||| ||||||||| ||||||||||||||||    
T  20275339 gatggattttgtgggattttttagtgaaattttagcatgaaaaagtctgtcatgaaagcatgagatttcttagcattgtttttttcttttaagattttac 20275240  T
Q  221 ta 222  Q
    ||    
T  20275239 ta 20275238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 21 - 219
Target Start/End: Complemental strand, 32143095 - 32142895
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnn--gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatt 118  Q
    ||||| ||||||| |||||||||||||||||||||         |||  |||||||||||||||||||||||||  || |||||||||||||||||||||    
T  32143095 gtcttatggtattgaatcaagactcttaatcacttcaaaaaaaagtcacgtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagatt 32142996  T
Q  119 ttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagatttt 218  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||| |||||||||||||||||| |||||||||| ||||||||||||||    
T  32142995 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttccataaaaacatgagatttcttaagattgtttttttcttttaagatttt 32142896  T
Q  219 a 219  Q
    |    
T  32142895 a 32142895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 67 - 222
Target Start/End: Original strand, 7113529 - 7113684
Alignment:
Q  67 agtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagt 166  Q
    ||||||||||||||| |||||||||||  | |||||||||||||||||||||||||| |||||||||||||||||||   ||||||||||| ||||||||    
T  7113529 agtggtattcaaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtgggattttctaggaaaattttagcatgaaaaagt 7113628  T
Q  167 ctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttacta 222  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||    
T  7113629 ctttcatgaaaacatgaaatttcttaggattgtttttttcttttaggattttacta 7113684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 10068498 - 10068689
Alignment:
Q  28 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggat 127  Q
    ||||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||  || ||||||||||||||| | ||||||||||||    
T  10068498 ggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattaaattttgatggat 10068597  T
Q  128 tttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttact 221  Q
    |||||||||||||||| ||||||||||||| |||||||| |||||| |||||||||||||| |||||||||||||  |||||||| ||||||||    
T  10068598 tttgtgggattttctagtgaaattttagcatgaaaaagtatttcataaaaacatgagatttgttaggattgtttt--tcttttaaaattttact 10068689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 23101322 - 23101504
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  23101322 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 23101421  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  23101422 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 23101504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 3022950 - 3023134
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  3022950 gtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 3023049  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||||||||||| || || ||||||| ||||||||||| ||||||||||| ||||||||||||  ||||||||||||    
T  3023050 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttcttgagattgtttttct 3023134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 9882412 - 9882229
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||    
T  9882412 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggatttt 9882313  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||||||||||| || || |||||||  ||||||||||||||||| |||| ||||||||||||  ||||||||||||    
T  9882312 gatggattttgtgggattttgtagtgtaattttaagaagaaaaagtctttcat-aaaaaatgagatttcttgagattgtttttct 9882229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 18838413 - 18838597
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || ||| |||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  18838413 gtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaattggatttt 18838512  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||||||||||| || || ||||||| ||||||||||| ||||||||||| ||||||||||||  ||||||||||||    
T  18838513 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcttgagattgtttttct 18838597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 28034981 - 28034797
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| | ||||||||||||||| || |||||||       |||| |||||||||||||| |||||||||||||| |||||||||||||||  ||||||    
T  28034981 gtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggatttt 28034882  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||||||||||| || || ||||||| ||| ||||||||||||||||||| ||||||||||||  ||||||||||||    
T  28034881 gatggattttgtgggattttgtagtgtaattttaacaaaaaaaagtctttcatgaaaagatgagatttcttgagattgtttttct 28034797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 28342371 - 28342553
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||| ||||| || |||| ||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  28342371 gtcttgaggtattcaatcgagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 28342470  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  28342471 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 28342553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 39784123 - 39784305
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||| ||||||| || |||||||||||||||  ||||||    
T  39784123 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggatttt 39784222  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  39784223 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 39784305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 21 - 191
Target Start/End: Complemental strand, 29614940 - 29614770
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||| || |||||||||||||||  ||||||    
T  29614940 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 29614841  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttctt 191  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||    
T  29614840 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 29614770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 8675357 - 8675541
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||| ||| ||| || |||||||||||||||  ||||||    
T  8675357 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatttaaacttcgaaggattgtttaataaattggatttt 8675456  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||||||||||| || || ||||||| ||||||||| ||||| ||||||| ||||||||||||  ||||||||||||    
T  8675457 gatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaagatgagatttcttgagattgtttttct 8675541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 33382661 - 33382845
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       ||||  ||||||||||||||||| ||||||| || |||||||||||||||  ||||||    
T  33382661 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcatggtattcaaaatcatttaaatttcgaaggattgtttaataaattggatttt 33382760  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||| ||||||| ||||||||| ||  ||||||||||||    
T  33382761 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttatttagattgtttttct 33382845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 67 - 168
Target Start/End: Original strand, 43679491 - 43679592
Alignment:
Q  67 agtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagt 166  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  43679491 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 43679590  T
Q  167 ct 168  Q
    ||    
T  43679591 ct 43679592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 69 - 205
Target Start/End: Complemental strand, 43187485 - 43187349
Alignment:
Q  69 tggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtct 168  Q
    ||||||||||||||||||||||||  ||  ||||||||||||||  |||||||||| ||||||| |||||||||| |||||||||| |||||||||||||    
T  43187485 tggtattcaaaatcattcaaattttgaagcattgtttaataaattggattttgatgaattttgtcggattttctagtgaaattttaacaagaaaaagtct 43187386  T
Q  169 ttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||| ||||||||||| || |||||||||||||    
T  43187385 ttcatgaagacatgagattttttgggattgtttttct 43187349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 7993166 - 7993350
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||| ||| || |||||||       ||||  ||||||||||||||||||||||||| || |||||||||||||||   |||||    
T  7993166 gtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaatttt 7993265  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||| ||||||||||| || || ||||||| ||||||||||||||||||||||| || |||||||||  ||||||||||||    
T  7993266 gatggattgtgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttcttgagattgtttttct 7993350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 63 - 202
Target Start/End: Original strand, 12740439 - 12740577
Alignment:
Q  63 gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaa 162  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||||||||| || || ||||||| ||||| |    
T  12740439 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaatg-gattttgatagattttgtgggattttatagtgtaattttaacaagaga 12740537  T
Q  163 aagtctttcatgaaaacatgagatttcttaggattgtttt 202  Q
    ||||||||||| |||| ||||||||||||| |||||||||    
T  12740538 aagtctttcataaaaagatgagatttcttaagattgtttt 12740577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 63 - 222
Target Start/End: Original strand, 12963767 - 12963919
Alignment:
Q  63 gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaa 162  Q
    |||| ||||||| |||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  12963767 gtctcgtggtatccaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtaagaaa 12963866  T
Q  163 aagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttacta 222  Q
    ||||||||  |     |||||||||||||  |||||||||  |||||||| |||||||||    
T  12963867 aagtctttttt-----catgagatttcttgagattgtttt--tcttttaaaattttacta 12963919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 24 - 204
Target Start/End: Original strand, 9179907 - 9180077
Alignment:
Q  24 ttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgat 123  Q
    |||| ||||||||||||||||||| |||||||       |||| ||||||| |||||||| | ||||| | || |||||||||||||||          |    
T  9179907 ttgtcgtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatacaaaatcacttaaattccgaaggattgtttaataaat----------t 9179996  T
Q  124 ggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttc 204  Q
    |||||||||||||||||||| |||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  9179997 ggattttgtgggattttctagtgaatttttagcataaaaaagtctttcatgaaaacatgagatttcttaggattgtttttc 9180077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 25 - 130
Target Start/End: Original strand, 31638910 - 31639015
Alignment:
Q  25 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatg 124  Q
    |||||||||| ||||||||||||||||||||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  31638910 tgtggtattctatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 31639009  T
Q  125 gatttt 130  Q
    ||||||    
T  31639010 gatttt 31639015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 28 - 205
Target Start/End: Complemental strand, 44256935 - 44256758
Alignment:
Q  28 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggat 127  Q
    ||||||||||||||||| || |||||||       || | |||||||||||||||||||||||||| ||||||||||||||||||  ||||| |||| ||    
T  44256935 ggtattcaatcaagacttttcatcacttaaaaaaagtatcgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggatttggatgaat 44256836  T
Q  128 tttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    ||||| |||||||  | || ||||||| ||||||||||| |||||| |||| ||||||||| ||  ||||||||||||    
T  44256835 tttgttggattttgcagtgtaattttaacaagaaaaagtttttcatcaaaatatgagattttttgagattgtttttct 44256758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 46405607 - 46405433
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  46405607 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaatgattgtttaataaattggatttt 46405508  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    ||||||||||||||          || ||||||| ||||||||||| ||| || |||| ||||||||||||  ||||||||||||    
T  46405507 gatggattttgtgg----------tgtaattttaacaagaaaaagtatttaataaaaagatgagatttcttgagattgtttttct 46405433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 68 - 220
Target Start/End: Complemental strand, 1470362 - 1470213
Alignment:
Q  68 gtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtc 167  Q
    ||||||||||||||| ||||||||| |||  |||||||||| ||| |||||||||| | |||||||||||||||| || ||||||||||| |||||| ||    
T  1470362 gtggtattcaaaatcgttcaaattttaaagcattgtttaatgaattagattttgatag-ttttgtgggattttctgataaaattttagcatgaaaaaatc 1470264  T
Q  168 tttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    |||  |||||||  |||||||| ||| ||||||||| ||||||||||||||||    
T  1470263 ttttttgaaaac--gagatttcctagcattgtttttttcttttaagattttac 1470213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 72 - 203
Target Start/End: Original strand, 19810874 - 19810995
Alignment:
Q  72 tattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttc 171  Q
    |||||||||||||||||||||||||||||||||||||||||          |||||||||||| |||||||| |||||||||||||  |||| |||||||    
T  19810874 tattcaaaatcattcaaatttcaaatgattgtttaataaat----------tggattttgtggaattttctagtgaaattttagcataaaaatgtctttc 19810963  T
Q  172 atgaaaacatgagatttcttaggattgttttt 203  Q
    ||||||||||||||||||||  ||||||||||    
T  19810964 atgaaaacatgagatttcttgagattgttttt 19810995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 40460883 - 40460709
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| | ||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||    
T  40460883 gtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggatttt 40460784  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||          || || ||||||| ||||||||| ||||||||||||| ||||||||||||  ||||||||||||    
T  40460783 gatggattttg----------tagtgtaattttaacaagaaaaaatctttcatgaaaatatgagatttcttgagattgtttttct 40460709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 3797233 - 3797059
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| ||||||||||| |||||| ||||||  || ||||||||||||||| |||||||    
T  3797233 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaagatcattaaaattttgaaggattgtttaataaattagatttt 3797134  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||         ||||||||| ||||||||||||| |||||||||||| | |||||||| |||||||||||||||||||||||    
T  3797133 gatgg---------gattttctagtgaaattttagcatgaaaaagtcttttaagaaaacat-agatttcttaggattgtttttct 3797059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 205
Target Start/End: Complemental strand, 37972981 - 37972859
Alignment:
Q  83 attcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatg 182  Q
    ||||||||||| || |||| ||||||||||  ||||||||||||||||| |||||||| || || ||||||| ||||||||||||||||||||||| |||    
T  37972981 attcaaatttcgaaggattatttaataaattggattttgatggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatg 37972882  T
Q  183 agatttcttaggattgtttttct 205  Q
    ||| |||||  ||||||||||||    
T  37972881 agacttcttgagattgtttttct 37972859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 64 - 179
Target Start/End: Original strand, 727587 - 727692
Alignment:
Q  64 tctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaa 163  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||| ||||||||||||| |||||    
T  727587 tctagtagtattcaaaatcattcaaatttcaaaggattgtttaataaatca----------gattttgtgggattttctagtgaaattttagcatgaaaa 727676  T
Q  164 agtctttcatgaaaac 179  Q
    ||||||||||||||||    
T  727677 agtctttcatgaaaac 727692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 25805763 - 25805862
Alignment:
Q  68 gtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtc 167  Q
    ||||||||||||||||||||||||||  | |||||||||||||||   ||| |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  25805763 gtggtattcaaaatcattcaaatttcgtaggattgtttaataaattgaattatgatggattttgtgggattttctaataaaattttagcatgaaaaagtc 25805862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 41827405 - 41827512
Alignment:
Q  98 gattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggatt 197  Q
    |||||||||||||||  |||||||||||||||||||||||| | || || ||||||| |||||||| |||||||||||||| ||||||||||||  ||||    
T  41827405 gattgtttaataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatatgagatttcttgagatt 41827504  T
Q  198 gtttttct 205  Q
    ||||||||    
T  41827505 gtttttct 41827512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 509680 - 509852
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  509680 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaacgattgtttaataaattggatttt 509779  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||||          || ||  |||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  509780 gatggattttg----------tagtgggattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 509852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 163
Target Start/End: Original strand, 32883814 - 32883948
Alignment:
Q  29 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggatt 128  Q
    ||||||||| |||||| || |||||||       |||| |||||||||||||||||||||||||| |||||||||||| |||||  ||||||||||||||    
T  32883814 gtattcaattaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttattaaattggattttgatggatt 32883913  T
Q  129 ttgtgggattttctaatgaaattttagcaagaaaa 163  Q
    | |||||||||| || || ||||||| ||||||||    
T  32883914 tcgtgggattttgtagtgtaattttaacaagaaaa 32883948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 44122076 - 44121902
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||        ||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  44122076 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 44121977  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||          || || ||||||| ||||||||||||||| ||||||| ||||||||| ||  ||||||||||||    
T  44121976 gatggattttg----------tagtgtaattttaacaagaaaaagtctttaatgaaaagatgagattttttgagattgtttttct 44121902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 202
Target Start/End: Original strand, 19251563 - 19251734
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||| | | || |||||||       |||| |||||||||||||||||||||||||| || |||||||||||||||            
T  19251563 gtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat-------- 19251654  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttt 202  Q
      |||||||||  |||||||||  |||||||||||||| |||||||||||||||||||| ||| ||||||| ||||| ||||    
T  19251655 --tggattttgatggattttcttgtgaaattttagcaataaaaagtctttcatgaaaacctgaaatttcttgggattatttt 19251734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 10676596 - 10676463
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||| || |||||||       ||||  | ||||||||||||||||||||||| || |||||||||||||||  |||||     
T  10676596 gtcttgtggtattcaatcaagacttttcatcacttaaaaaaagtctcattgtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttg 10676497  T
Q  121 gatggattttgtgggattttctaatgaaatttta 154  Q
    |||||||||| ||| |||||||  ||||||||||    
T  10676496 gatggattttatggaattttcttgtgaaatttta 10676463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 37327951 - 37328125
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || || ||||       |||| ||||||||||||||||||||||||||||| |||||||||||||||   |||||    
T  37327951 gtcttgaggtattcaatcaagacttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattgaatttt 37328050  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||| | ||          ||||||| ||| ||||||||||||||||||| || |||||| ||  ||||||||||||    
T  37328051 gatggattttgtagtat----------aattttaacaaaaaaaagtctttcatgaaaagataagattttttgagattgtttttct 37328125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 21 - 188
Target Start/End: Complemental strand, 33892426 - 33892269
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| |||||||||| |||||||  ||||||    
T  33892426 gtcttgaggtattcaatcaagacttttcatcacttaaacaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgttaaataaattggatttt 33892327  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagattt 188  Q
     ||| ||||||          || || ||||||| |||||||||||||||||| |||| |||||||||    
T  33892326 tatgaattttg----------tagtgtaattttaacaagaaaaagtctttcattaaaagatgagattt 33892269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 103 - 221
Target Start/End: Original strand, 10617024 - 10617141
Alignment:
Q  103 tttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacat-gagatttcttaggattgttt 201  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||| ||||||| || || ||||||||||| |||||||  |||||| || |||||| ||    
T  10617024 tttaataaattagattttgatggattttgtgagattttctagtgatattttagtaataacaagtctttcataaaaacataaagattttttgggattgctt 10617123  T
Q  202 ttctcttttaagattttact 221  Q
    |  |||||||| ||||||||    
T  10617124 t--tcttttaaaattttact 10617141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 69 - 205
Target Start/End: Original strand, 29585586 - 29585712
Alignment:
Q  69 tggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtct 168  Q
    ||||||||||||||||||||||||  || ||||||||||||| |  |||||||||||||||||          || || ||||||| |||||||||||||    
T  29585586 tggtattcaaaatcattcaaattttgaaggattgtttaataatttggattttgatggattttg----------tagtgtaattttaacaagaaaaagtct 29585675  T
Q  169 ttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    ||||| |||| |||| |||||||  ||||||||||||    
T  29585676 ttcataaaaagatgaaatttcttgagattgtttttct 29585712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 171 - 222
Target Start/End: Original strand, 31639031 - 31639082
Alignment:
Q  171 catgaaaacatgagatttcttaggattgtttttctcttttaagattttacta 222  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  31639031 catgaaaacatgatatttcttaggattgtttttttcttttaagattttacta 31639082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 21 - 188
Target Start/End: Complemental strand, 44623452 - 44623295
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    ||||||||||||| ||||||||||||| |||||||       |||| ||| |||||||||||||||| ||||| || || ||||||||||||            
T  44623452 gtcttgtggtatttaatcaagactcttcatcactttaaaaaggtctcgtgatattcaaaatcattcatatttctaaagactgtttaataaat-------- 44623361  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagattt 188  Q
      || ||||||||| |||||||| ||||||||||| | |||||||||| |||| |||| |||| ||||    
T  44623360 --tgaattttgtggaattttctagtgaaattttagaatgaaaaagtctctcataaaaatatgatattt 44623295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 39028121 - 39028232
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| | ||||||||||||||| || |||||||       |||| ||| ||||||||||| |||||||| | || |||||||||||||||  ||||||    
T  39028121 gtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtgttattcaaaatcgttcaaattacgaaagattgtttaataaattggatttt 39028220  T
Q  121 gatggattttgt 132  Q
    ||||||||||||    
T  39028221 gatggattttgt 39028232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 447854 - 447913
Alignment:
Q  68 gtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggat 127  Q
    |||||||| ||||||||||||||||| |||||||||||||| |||  |||||||||||||    
T  447854 gtggtatttaaaatcattcaaatttcgaatgattgtttaattaattggattttgatggat 447913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 47066770 - 47066828
Alignment:
Q  63 gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttg 121  Q
    |||| |||||||||||||||||||||||||| || |||||||||||||||  |||||||    
T  47066770 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 47066828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 17001152 - 17001099
Alignment:
Q  68 gtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttg 121  Q
    |||||||||||||||||||||||||| || |||||||||||||||  |||||||    
T  17001152 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 17001099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 17001106 - 17001049
Alignment:
Q  134 ggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttctt 191  Q
    ||||||| || || |||| || ||||||||||||||||||||||| ||||||||||||    
T  17001106 ggattttgtagtgtaattataacaagaaaaagtctttcatgaaaatatgagatttctt 17001049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 51
Target Start/End: Original strand, 8078428 - 8078457
Alignment:
Q  22 tcttgtggtattcaatcaagactcttaatc 51  Q
    ||||||||||||||||||||||||||||||    
T  8078428 tcttgtggtattcaatcaagactcttaatc 8078457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 191
Target Start/End: Original strand, 47066821 - 47066878
Alignment:
Q  134 ggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttctt 191  Q
    ||||||| || || ||||||| ||||||||| | ||||||||||| ||||||||||||    
T  47066821 ggattttgtagtgtaattttaacaagaaaaaatatttcatgaaaagatgagatttctt 47066878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 161; Significance: 8e-86; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 6197654 - 6197453
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  6197654 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 6197555  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6197554 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 6197455  T
Q  221 ta 222  Q
    ||    
T  6197454 ta 6197453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 1391653 - 1391854
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  1391653 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcagatttt 1391752  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||   ||||||||||||||    
T  1391753 gatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttaggattgttttttctttttaagattttac 1391852  T
Q  221 ta 222  Q
    ||    
T  1391853 ta 1391854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 2300914 - 2300714
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    ||||||||||||||||||||||||||| |||||||       ||||| ||||||| ||||||||||||||||| || ||||||||||||||| |||||||    
T  2300914 gtcttgtggtattcaatcaagactcttgatcacttaaaaaaagtctactggtattgaaaatcattcaaatttcgaaggattgtttaataaataagatttt 2300815  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||    
T  2300814 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggatt-tttttttcttttaaaattttac 2300716  T
Q  221 ta 222  Q
    ||    
T  2300715 ta 2300714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 28002694 - 28002895
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    ||||| |||||||||||||||||||||||||||||       |||||||| |||||||||||||||||||||  || |||||||||||||||||||||||    
T  28002694 gtcttctggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttggaaggattgtttaataaatcagatttt 28002793  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    |||||||||||||  |||||||| ||||||||||||| |||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  28002794 gatggattttgtgaaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaagcttcttaggattgtttttttcttttaagattttac 28002893  T
Q  221 ta 222  Q
    ||    
T  28002894 ta 28002895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 29076627 - 29076810
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattt 119  Q
    |||||||||||||||||| ||| ||||||||||||        ||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||    
T  29076627 gtcttgtggtattcaatctagattcttaatcacttaaaaaaaagtctagtagtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattt 29076726  T
Q  120 tgatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    ||||||||||| | |||||||||| ||||||||||||| |||||| |||||||| |||||||||||||| ||||||||||||||    
T  29076727 tgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcataaaaacatgagattttttaggattgttttt 29076810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 29111600 - 29111784
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnn--gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatt 118  Q
    |||||||||||||||||| ||| ||||||||||||         ||||||| ||||||||||||||||||||||| || |||||||||||||||||||||    
T  29111600 gtcttgtggtattcaatctagattcttaatcacttaaaaaaaaagtctagtagtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatt 29111699  T
Q  119 ttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||||| | |||||||||| ||||||||||||| |||||| |||||||| |||||||||||||| ||||||||||||||    
T  29111700 ttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcataaaaacatgagattttttaggattgttttt 29111784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 29 - 203
Target Start/End: Original strand, 31895733 - 31895907
Alignment:
Q  29 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggatt 128  Q
    |||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||||||||||    
T  31895733 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 31895832  T
Q  129 ttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    ||||||||||||||| || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  31895833 ttgtgggattttctagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 31895907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 21 - 204
Target Start/End: Original strand, 7051874 - 7052057
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||| |||||||||||||| |||||||       |||  ||| |||||||||||||||||||||| || |||||||||||||||  ||||||    
T  7051874 gtcttgtggtatacaatcaagactcttcatcacttaaaaaaagtcgtgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 7051973  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttc 204  Q
    |||||||||||| |||||||||| | ||||||||||| |||||||| |||||| ||| ||||||||||||||| ||||||||||    
T  7051974 gatggattttgtaggattttctagtaaaattttagcatgaaaaagtttttcataaaatcatgagatttcttagaattgtttttc 7052057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 29 - 205
Target Start/End: Complemental strand, 34759218 - 34759042
Alignment:
Q  29 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggatt 128  Q
    |||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||||||||||    
T  34759218 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttccaaggattgtttaataaattggattttgatggatt 34759119  T
Q  129 ttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||| || || ||||||| ||||||||| ||||||||||||| ||||||||||||  |||| |||||||    
T  34759118 ttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttgagattatttttct 34759042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 7497105 - 7497288
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||| || || ||||||||||||  ||||||    
T  7497105 gtcttgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggagtgtttaataaattggatttt 7497204  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||| ||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||  |||| |||||||    
T  7497205 gatggattttgt-ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattatttttct 7497288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 14262609 - 14262425
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||| | || |||| ||       |||| |||||||||||||||||| ||||||| || |||||||||||||||  ||||||    
T  14262609 gtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggatttt 14262510  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||||||||||| ||| ||||||||  ||||||||||||    
T  14262509 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgggatttcttgagattgtttttct 14262425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 21 - 191
Target Start/End: Original strand, 34773438 - 34773608
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||        ||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  34773438 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 34773537  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttctt 191  Q
    ||||||||||||||||||||  | || ||||||| ||||||||||||||||||||||| ||||||||||||    
T  34773538 gatggattttgtgggattttgcagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 34773608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 68 - 203
Target Start/End: Original strand, 31067569 - 31067694
Alignment:
Q  68 gtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtc 167  Q
    |||||||||||||||||||||||||| || |||||||||||||||          |||||||||||||||||| || || ||||||| ||||||||||||    
T  31067569 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 31067658  T
Q  168 tttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||| |||| ||||||||||||  ||||||||||    
T  31067659 tttcataaaaagatgagatttcttgagattgttttt 31067694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 205
Target Start/End: Complemental strand, 30385191 - 30385061
Alignment:
Q  63 gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaa 162  Q
    |||| |||||||||||||||||||||||||| || |||||||||||||||          |||||||||||||||||| || || ||||||| ||  | |    
T  30385191 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaaca--aca 30385104  T
Q  163 aagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||||||| ||||||||||||  ||||||||||||    
T  30385103 aagtctttcatgaaaagatgagatttcttgagattgtttttct 30385061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 656994 - 657101
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       |||||||||||||| ||||||||||||||           ||||||||||| |||| |    
T  656994 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattctaaatcattcaaatt-----------tttaataaatctgattct 657082  T
Q  121 gatggattttgtgggattt 139  Q
    |||||||||||||||||||    
T  657083 gatggattttgtgggattt 657101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 2238668 - 2238741
Alignment:
Q  149 attttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattg-tttttctcttttaagattttact 221  Q
    ||||||| | |||||| ||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||    
T  2238668 attttagtatgaaaaaatctttcatgaaaacatgagatttcttaagattgttttttttcttttaagattttact 2238741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 83 - 203
Target Start/End: Complemental strand, 4200541 - 4200431
Alignment:
Q  83 attcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatg 182  Q
    ||||||||||| || |||||||||||||||  |||||||||||||||||| |          || ||||||| ||||||||||||||||||||||| |||    
T  4200541 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtag----------tgtaattttaacaagaaaaagtctttcatgaaaagatg 4200452  T
Q  183 agatttcttaggattgttttt 203  Q
    |||||||||  ||||||||||    
T  4200451 agatttcttgagattgttttt 4200431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 657114 - 657165
Alignment:
Q  170 tcatgaaaacatgagatttcttaggattgtttttctcttttaagattttacta 222  Q
    |||||||||||||| ||||||||||||||||||| |||||||| |||||||||    
T  657114 tcatgaaaacatgaaatttcttaggattgttttt-tcttttaaaattttacta 657165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 11113771 - 11113733
Alignment:
Q  159 gaaaaagtctttcatgaaaacatgagatttcttaggatt 197  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  11113771 gaaaacgtctttcatgaaaacatgagatttcttaggatt 11113733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 3848286 - 3848330
Alignment:
Q  68 gtggtattcaaaatcattcaaatttcaaatgattgtttaataaat 112  Q
    |||||||||||||||||| ||||||  ||||||||||||||||||    
T  3848286 gtggtattcaaaatcatttaaattttgaatgattgtttaataaat 3848330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 161; Significance: 8e-86; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 25331160 - 25331361
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25331160 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttcaaaggattgtttaataaatcagatttt 25331259  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25331260 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 25331359  T
Q  221 ta 222  Q
    ||    
T  25331360 ta 25331361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 25 - 222
Target Start/End: Complemental strand, 30009850 - 30009653
Alignment:
Q  25 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatg 124  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  30009850 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaattttaaatgattgtttaataaatcagattttgatg 30009751  T
Q  125 gattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttacta 222  Q
    ||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  30009750 gattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttttcttttaagattttacta 30009653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 21 - 220
Target Start/End: Original strand, 1044836 - 1045035
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       |||||||||||||||||| ||||||| |||| || |||||||||||||||||||||||    
T  1044836 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaccattcaactttcgaaggattgtttaataaatcagatttt 1044935  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||    
T  1044936 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttagaattgtttttttcttttaagattttac 1045035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 21 - 208
Target Start/End: Original strand, 1112922 - 1113109
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1112922 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 1113021  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctctt 208  Q
    ||||||||||||||||||| ||| | |||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1113022 gatggattttgtgggatttcctagtaaaattttaacatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttctt 1113109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 22202044 - 22202245
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||| |||||||||| ||||||||||||||| | |||||    
T  22202044 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaatttcaaaagattgtttaataaataaaatttt 22202143  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||| |||||||| |||||||    
T  22202144 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacattagatttcttagcattgtttttttcttttaaaattttac 22202243  T
Q  221 ta 222  Q
    ||    
T  22202244 ta 22202245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 25 - 222
Target Start/End: Complemental strand, 34228756 - 34228559
Alignment:
Q  25 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatg 124  Q
    |||||||||||||||| | ||||||||||||       ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  34228756 tgtggtattcaatcaaaattcttaatcacttaaaaaaagtctagtggtattcaaaatcattgaaatttcgaatgattgtttaataaatcagattttgatg 34228657  T
Q  125 gattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttacta 222  Q
    |||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  34228656 gattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttttcttttaagattttacta 34228559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 41881260 - 41881056
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattt 119  Q
    |||||||||||||||||||||||||||||||||||        || |||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  41881260 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtttagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattt 41881161  T
Q  120 tgatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgt--ttttctcttttaagattt 217  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||    
T  41881160 tgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttttcttttaagattt 41881061  T
Q  218 tacta 222  Q
    |||||    
T  41881060 tacta 41881056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 25 - 222
Target Start/End: Original strand, 55302876 - 55303077
Alignment:
Q  25 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatg 124  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  55302876 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 55302975  T
Q  125 gattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattg----tttttctcttttaagattttac 220  Q
    ||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||    ||||| ||||||||||||||||    
T  55302976 gatattgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttgttttttttcttttaagattttac 55303075  T
Q  221 ta 222  Q
    ||    
T  55303076 ta 55303077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 21 - 221
Target Start/End: Complemental strand, 39479534 - 39479332
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnn--gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatt 118  Q
    |||||||||||||||||||||||||||||||||||         | || |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  39479534 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaaaagacttgtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagatt 39479435  T
Q  119 ttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagatttt 218  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  39479434 ttgatggattttgtgggattttctagtgaaattttagcaggaaaaagtctttcatgaaagcatgagatttcttaggattgtttttttcttttaagatttt 39479335  T
Q  219 act 221  Q
    |||    
T  39479334 act 39479332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 12112974 - 12113176
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||| ||||||||||||||       ||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  12112974 gtcttgtggtattcaatcaaaactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 12113073  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctctttt-aagatttta 219  Q
     ||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||    
T  12113074 aatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttgggattgtttttttcttttaaagatttta 12113173  T
Q  220 cta 222  Q
    |||    
T  12113174 cta 12113176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 25 - 222
Target Start/End: Complemental strand, 32951009 - 32950811
Alignment:
Q  25 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatg 124  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  32951009 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 32950910  T
Q  125 gattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttagga-ttgtttttctcttttaagattttacta 222  Q
     |||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||| || || ||||| ||||||||||||||||||    
T  32950909 aattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttcttaagatttttttttttcttttaagattttacta 32950811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 42786713 - 42786913
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||    
T  42786713 gtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcatatttt 42786812  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    |||||||||||||| |||||||| |||||||||| ||  ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  42786813 gatggattttgtggaattttctagtgaaattttatcataaaaaagtctttcatgaaaacatgagatttcttatgattgttttt-tcttttaagattttac 42786911  T
Q  221 ta 222  Q
    ||    
T  42786912 ta 42786913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 25 - 222
Target Start/End: Original strand, 7007407 - 7007605
Alignment:
Q  25 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatg 124  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  7007407 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 7007506  T
Q  125 gattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattg-tttttctcttttaagattttacta 222  Q
     |||||||||||||||||| ||||||||||||| |||||  | ||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  7007507 aattttgtgggattttctagtgaaattttagcatgaaaatttttttcatgaaaacatgagatttcttaagattgttttttttcttttaagattttacta 7007605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 24 - 222
Target Start/End: Complemental strand, 37046626 - 37046425
Alignment:
Q  24 ttgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttga 122  Q
    ||||||||||||||||||||||||||||||||        |||||||| |||| ||||||||||||||||| || |||||||||||||||||||||||||    
T  37046626 ttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtgatatttaaaatcattcaaatttcgaaggattgtttaataaatcagattttga 37046527  T
Q  123 tggattttgtgggattttctaatg-aaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattg-tttttctcttttaagattttac 220  Q
    |||||||||||| |||||||| || ||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||    
T  37046526 tggattttgtggaattttctagtgaaaattttagcatgaaaaagtctttcatgaaaatatgagatttcttaggattgttttttttcttttaagattttac 37046427  T
Q  221 ta 222  Q
    ||    
T  37046426 ta 37046425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 35 - 220
Target Start/End: Original strand, 41320853 - 41321038
Alignment:
Q  35 aatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgg 134  Q
    |||||||||||||||||| ||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  41320853 aatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgg 41320952  T
Q  135 gattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||| ||||| ||||||||||| | ||||||||||||||| |||||||||||||||||| ||||| |||| ||||||||||||||||    
T  41320953 gatgttctagtgaaattttagtatgaaaaagtctttcataaaaacatgagatttcttaagattgattttttcttttaagattttac 41321038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 3436623 - 3436823
Alignment:
Q  22 tcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttg 121  Q
    ||||||| ||||||||||||||||||||||| ||        |||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  3436623 tcttgtgatattcaatcaagactcttaatcatttaaaaaaaatctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 3436722  T
Q  122 atggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttact 221  Q
    ||| ||||||||||||||| || |||||||||| || |||||||| |||||||||||||| ||||||||||| ||||||||| |||||||||||||||||    
T  3436723 atgaattttgtgggattttgtagtgaaattttaacatgaaaaagtttttcatgaaaacataagatttcttagaattgtttttttcttttaagattttact 3436822  T
Q  222 a 222  Q
    |    
T  3436823 a 3436823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 24131149 - 24130957
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       |||||||||||||||||          |||| ||||||||||||||||||||||||||    
T  24131149 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa----------tttcgaatgattgtttaataaatcagatttt 24131060  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaag-aaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagatttta 219  Q
    ||||||||||||||||||||||| ||||||||||| | | ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24131059 gatggattttgtgggattttctagtgaaattttaggatgaaaaaaatctttcatgaaaacatgagatttcttaggattgtttttttcttttaagatttta 24130960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 46635819 - 46635624
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       || |||| ||||||||||||||||||||||| || ||||||||||||||| |||||      
T  46635819 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtttagtagtattcaaaatcattcaaatttcgaaggattgtttaataaataagatt-- 46635722  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
        |||||||||||||||| || ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||    
T  46635721 ----gattttgtgggattttttagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattgtttttttcttttaaaattttac 46635626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 22 - 169
Target Start/End: Original strand, 25446080 - 25446227
Alignment:
Q  22 tcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttg 121  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25446080 tcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttg 25446179  T
Q  122 atggattttgtgggattttctaatgaaattttagcaagaaaaagtctt 169  Q
    ||||||||||||||||||| || ||||||||||||| |||||||||||    
T  25446180 atggattttgtgggattttttagtgaaattttagcatgaaaaagtctt 25446227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 37 - 221
Target Start/End: Complemental strand, 31314893 - 31314719
Alignment:
Q  37 tcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtggga 136  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||          |||||    
T  31314893 tcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg----------tggga 31314804  T
Q  137 ttttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttact 221  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31314803 ttttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttact 31314719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 28541727 - 28541874
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||| ||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28541727 gtctcgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 28541826  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtct 168  Q
    |||||||||||||| |||||||| ||||||||||||| ||||||||||    
T  28541827 gatggattttgtggaattttctagtgaaattttagcatgaaaaagtct 28541874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 53275868 - 53276069
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    ||||||| |||||||||||||| | ||||||||||       |||||||| |||| ||||||||||||||||| || |||||| ||||||||||||||||    
T  53275868 gtcttgtagtattcaatcaagatttttaatcacttaaaaaaagtctagtgatatttaaaatcattcaaatttcgaaggattgtgtaataaatcagatttt 53275967  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttca-tgaaaacatgagatttcttaggattgtttttctcttttaagatttta 219  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||||||||||| | ||||| | |||||| |||||||||||||| |||||||||||||||    
T  53275968 gatggattttgtgagattttctaataaaattttagcatgaaaaagtctttcattaaaaactttagattttttaggattgttttt-tcttttaagatttta 53276066  T
Q  220 cta 222  Q
    |||    
T  53276067 cta 53276069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 5441433 - 5441615
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  5441433 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 5441532  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  5441533 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 5441615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 27768085 - 27768267
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  27768085 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 27768184  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  27768185 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 27768267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 54341173 - 54341355
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  54341173 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 54341272  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  54341273 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 54341355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 29 - 205
Target Start/End: Complemental strand, 54853637 - 54853461
Alignment:
Q  29 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggatt 128  Q
    |||||||||||||||| || |||||||       |||| |||||||||||||| |||||||||||||| |||||||||||||||  ||||||||||||||    
T  54853637 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggatt 54853538  T
Q  129 ttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||| || || ||||||| ||||||||| ||||||||||||| ||||||||||||  ||||||||||||    
T  54853537 ttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttgagattgtttttct 54853461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 66 - 215
Target Start/End: Complemental strand, 27454210 - 27454061
Alignment:
Q  66 tagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaag 165  Q
    |||||||||||||||||||||||||||  || |||| |||||||||||||||||||||| ||||||||| |||||||| ||||||||| ||| |||||||    
T  27454210 tagtggtattcaaaatcattcaaattttgaaagattatttaataaatcagattttgatgaattttgtggaattttctagtgaaattttggcatgaaaaag 27454111  T
Q  166 tctttcatgaaaacatgagatttcttaggattgtttttctcttttaagat 215  Q
    |||||||||||||||| | |||| ||| |||||||||| |||||||||||    
T  27454110 tctttcatgaaaacataatatttgttaagattgtttttttcttttaagat 27454061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 40537322 - 40537136
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||| ||||||||||||||       ||     |||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  40537322 gtcttgtggtattcaatcaaaactcttaatcacttaaaaaatgt-----ggtattcaaaatcatttaaatttcgaatgattgtttaataaatctgatttt 40537228  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||          ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||    
T  40537227 gatggattttgtgg----------tgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggatttttttttttttttaagattttac 40537138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 25 - 177
Target Start/End: Complemental strand, 19741081 - 19740929
Alignment:
Q  25 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatg 124  Q
    ||||||||||| |||||||| ||||||||||       |||| |||||||| ||||||||||||||||| || ||||||||||||||| |||||||||||    
T  19741081 tgtggtattcagtcaagacttttaatcacttaaaaaaagtcttgtggtattaaaaatcattcaaatttcgaaggattgtttaataaattagattttgatg 19740982  T
Q  125 gattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaa 177  Q
    ||||||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  19740981 gattttgtgggattttctagtgaaattttagcttgaaaaagtctttcatgaaa 19740929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 51320950 - 51321134
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  51320950 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 51321049  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||||  ||||| || || ||||||| ||||||||||| ||||||||||| ||||||||||||  ||||||||||||    
T  51321050 gatggattttgtgtaattttatagtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttcttgagattgtttttct 51321134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 63 - 168
Target Start/End: Complemental strand, 7249900 - 7249795
Alignment:
Q  63 gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaa 162  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  7249900 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 7249801  T
Q  163 aagtct 168  Q
    ||||||    
T  7249800 aagtct 7249795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 21 - 203
Target Start/End: Complemental strand, 37828579 - 37828397
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||| | || |||| ||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  37828579 gtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 37828480  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||||||||||||| || || |||||||  |||||||||||||||||||||| ||||||||||||  ||||||||||    
T  37828479 gatggattttgtgggattttgtagtgtaattttaaaaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 37828397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 37915856 - 37916040
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  37915856 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 37915955  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||||||||||| || || | ||||| |||||||||||| |||||||||| || |||||| ||  ||||||||||||    
T  37915956 gatggattttgtgggattttgtagtgtacttttaacaagaaaaagtcattcatgaaaagataagatttattgagattgtttttct 37916040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 63 - 203
Target Start/End: Original strand, 48261198 - 48261338
Alignment:
Q  63 gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaa 162  Q
    |||| |||||||||||||||||||||||||  || |||||||||||||||  |||||||||||||||||||||||||| || || ||||||| |||||||    
T  48261198 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 48261297  T
Q  163 aagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    || ||||||||||||| ||||||||||||  ||||||||||    
T  48261298 aaatctttcatgaaaatatgagatttcttgagattgttttt 48261338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 32322120 - 32322304
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||| || |||||||||||||||   |||||    
T  32322120 gtcttgaggtattcaatcaagatttttcatcacttaaaaatagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaatttt 32322219  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||||||||||| || || |||||||  ||||||| ||||||||| |||| ||||||||||||  ||||||||||||    
T  32322220 gatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcataaaaagatgagatttcttgagattgtttttct 32322304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 21 - 218
Target Start/End: Complemental strand, 39307430 - 39307234
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||| |||| |||| ||       |||| |||||||||| ||||||||||||||| || |||| |||||| |||    ||||    
T  39307430 gtcttgtggtattcaatcaagattcttcatcatttaaaaaaagtcttgtggtattcataatcattcaaatttctaaagattatttaatgaattgagtttt 39307331  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagatttt 218  Q
    |||| |||||||||||||||||| |||||||||| || |||||||| | | || ||||||||||||||||||| ||||||||| ||||||||||||||    
T  39307330 gatgaattttgtgggattttctagtgaaattttaacatgaaaaagtttctgataaaaacatgagatttcttagaattgttttt-tcttttaagatttt 39307234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 30 - 154
Target Start/End: Original strand, 23464993 - 23465117
Alignment:
Q  30 tattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattt 129  Q
    ||||||||||||||||||||||||||       |||||||||||||||||| |||||||||||| || ||||||||||||||||||| ||||||||||||    
T  23464993 tattcaatcaagactcttaatcacttaaaataagtctagtggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagaatttgatggattt 23465092  T
Q  130 tgtgggattttctaatgaaatttta 154  Q
    |||||||||||||| | ||||||||    
T  23465093 tgtgggattttctagttaaatttta 23465117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 22 - 141
Target Start/End: Complemental strand, 25504815 - 25504696
Alignment:
Q  22 tcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttg 121  Q
    ||||||| ||||||||||||||||||||||||||       ||| |||| |||||||||||||||||||||| || ||||||||||||||||||||||||    
T  25504815 tcttgtgatattcaatcaagactcttaatcacttaaaaaaagtccagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 25504716  T
Q  122 atggattttgtgggattttc 141  Q
    ||||||||||||||||||||    
T  25504715 atggattttgtgggattttc 25504696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 9163105 - 9163279
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||| | || ||||| |       |||| ||| |||||||||||||||||||||| || ||||||||||||||| | |||||    
T  9163105 gtcttgtggtattcaatcaagatttttcatcacataaaaaaagtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattaaatttt 9163204  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||||||| |||||||| ||||||||||||| |||        ||||||||||||||||||||||| ||||||||||    
T  9163205 gatggattttgtggaattttctagtgaaattttagcatgaa--------tcatgaaaacatgagatttcttatgattgttttt 9163279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 44770982 - 44770862
Alignment:
Q  69 tggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtct 168  Q
    ||||||||||||||||||||||||  || |||||||||||||||  ||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||    
T  44770982 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttggtggattttgtgggattttctagtgaaattttaagaagaaaaagtct 44770883  T
Q  169 ttcatgaaaacatgagatttc 189  Q
    |||||||  ||||||||||||    
T  44770882 ttcatgacgacatgagatttc 44770862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 104 - 222
Target Start/End: Original strand, 8711978 - 8712094
Alignment:
Q  104 ttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||  |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||     
T  8711978 ttaataaattggattttgatggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttcttgagattgtttt- 8712076  T
Q  204 ctcttttaagattttacta 222  Q
     |||||||| |||||||||    
T  8712077 -tcttttaaaattttacta 8712094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 69 - 205
Target Start/End: Complemental strand, 56445474 - 56445348
Alignment:
Q  69 tggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtct 168  Q
    ||||||||||||||||||||||||| ||||||||||||||||||          ||||||||||||||||||||| ||||| ||||||||||||||||||    
T  56445474 tggtattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggattttgtgggattttctagtgaaactttagcaagaaaaagtct 56445385  T
Q  169 ttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    ||||| || ||||||||||||||  ||||||||||||    
T  56445384 ttcataaagacatgagatttcttgagattgtttttct 56445348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 23987243 - 23987417
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||| ||| || |||||||       |||| |||||||||||||||||||||||||| || ||||||||||||||| |||||||    
T  23987243 gtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattagatttt 23987342  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||          || || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  23987343 gatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttct 23987417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 104 - 205
Target Start/End: Original strand, 24736447 - 24736548
Alignment:
Q  104 ttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||  ||||||||||||||||||| ||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||  ||||||||||    
T  24736447 ttaataaattggattttgatggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttcttgtgattgttttt 24736546  T
Q  204 ct 205  Q
    ||    
T  24736547 ct 24736548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 28 - 203
Target Start/End: Complemental strand, 30967469 - 30967304
Alignment:
Q  28 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggat 127  Q
    ||||||||||||||| | || |||||||       |||| ||||||||||||||||||||||||||||| |||||||||||||||          |||||    
T  30967469 ggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat----------tggat 30967380  T
Q  128 tttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    ||||||||||||| || || ||||||| ||||||||| ||||||||||||| || |||||||||  ||||||||||    
T  30967379 tttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaaaataagatttcttgagattgttttt 30967304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 69 - 205
Target Start/End: Original strand, 12913301 - 12913427
Alignment:
Q  69 tggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtct 168  Q
    ||||||||||||||||||||||||  || |||||||||||||||          ||||||||||||||||||||| |||||||||| ||||||||||| |    
T  12913301 tggtattcaaaatcattcaaattttgaaggattgtttaataaat----------tggattttgtgggattttctagtgaaattttaacaagaaaaagtat 12913390  T
Q  169 ttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||| |||||||||||||| | ||| |||||||    
T  12913391 ttcatgaagacatgagatttcttggaattatttttct 12913427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 21 - 134
Target Start/End: Complemental strand, 29649844 - 29649731
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  29649844 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaattggatttt 29649745  T
Q  121 gatggattttgtgg 134  Q
    ||||||||||||||    
T  29649744 gatggattttgtgg 29649731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 123 - 222
Target Start/End: Original strand, 11090435 - 11090532
Alignment:
Q  123 tggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttacta 222  Q
    |||||||||||||||||| || |||||||||||||  ||||||||||| || ||||||||||||||||||||||||||||||| |||||| |||||||||    
T  11090435 tggattttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgagatttcttaggattgtttttct-ttttaa-attttacta 11090532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 41725196 - 41725321
Alignment:
Q  63 gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaa 162  Q
    |||| ||| |||||||||||||||||||||  || ||||||||||   ||  |||||||||| ||||||||||||||| || || ||||||| |||||||    
T  41725196 gtcttgtgatattcaaaatcattcaaattttgaaggattgtttaa---attggattttgatgaattttgtgggattttatagtgtaattttaacaagaaa 41725292  T
Q  163 aagtctttcatgaaaacatgagatttctt 191  Q
    || ||||||||||||| ||||||||||||    
T  41725293 aaatctttcatgaaaagatgagatttctt 41725321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 22 - 205
Target Start/End: Complemental strand, 49501687 - 49501512
Alignment:
Q  22 tcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttg 121  Q
    ||||| ||||||||||||||||| || |||||||       |||| |||| ||||||||||||||||||||| ||||||||||||||||||             
T  49501687 tcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaatttcgaatgattgtttaataaat--------- 49501597  T
Q  122 atggattttgtgggattttctaatgaaattttagcaagaaaaagtctttc--atgaaaacatgagatttcttaggattgtttttct 205  Q
     |||||||||||| ||||| || || ||||||| ||||||||||||||||  || |||| ||||||||||||  ||||||||||||    
T  49501596 -tggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaagatgagatttcttgagattgtttttct 49501512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 22 - 205
Target Start/End: Complemental strand, 49507752 - 49507577
Alignment:
Q  22 tcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttg 121  Q
    ||||| ||||||||||||||||| || |||||||       |||| |||| ||||||||||||||||||||| ||||||||||||||||||             
T  49507752 tcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaatttcgaatgattgtttaataaat--------- 49507662  T
Q  122 atggattttgtgggattttctaatgaaattttagcaagaaaaagtctttc--atgaaaacatgagatttcttaggattgtttttct 205  Q
     |||||||||||| ||||| || || ||||||| ||||||||||||||||  || |||| ||||||||||||  ||||||||||||    
T  49507661 -tggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaagatgagatttcttgagattgtttttct 49507577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 28483928 - 28484101
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| || |||| ||||||||||            
T  28483928 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaat-------- 28484019  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
      |||||||||| ||||||| || || || |||| ||||||||||||||||||||||| | ||||||||||| |||| |||||||    
T  28484020 --tggattttgtaggattttgtagtgtaa-tttaacaagaaaaagtctttcatgaaaagacgagatttcttaagattatttttct 28484101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 83 - 189
Target Start/End: Original strand, 20021424 - 20021531
Alignment:
Q  83 attcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagc-aagaaaaagtctttcatgaaaacat 181  Q
    |||||||||| ||| ||||||||||||||| |||||||| |||||||| ||||||||| ||||||||||||| | || ||||| ||||||||||| ||||    
T  20021424 attcaaattttaaaggattgtttaataaattagattttgctggattttatgggattttttaatgaaattttaacaaaaaaaaaatctttcatgaagacat 20021523  T
Q  182 gagatttc 189  Q
     |||||||    
T  20021524 aagatttc 20021531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 221
Target Start/End: Complemental strand, 36479408 - 36479221
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| |||||||||| |||| | || |||||||       |||| |||||||||||||| ||||||||||| || |||| ||||||||||  ||||||    
T  36479408 gtcttgaggtattcaattaagatttttcatcacttaaaaaaagtctcgtggtattcaaaattattcaaatttcgaaggattatttaataaattggatttt 36479309  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||           || |||||||||||||| ||||||||||| ||||||||||||||||||||  |||| ||||  |||||||| |||||||    
T  36479308 gatggatttt-----------tagtgaaattttagcaaaaaaaagtcttttatgaaaacatgagatttcttgagattatttt--tcttttaaaattttac 36479222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 69 - 154
Target Start/End: Original strand, 28371001 - 28371086
Alignment:
Q  69 tggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaatttta 154  Q
    |||||||||||||||||||||||| ||| |||||||||||||||   |||||| || |||||||||||||||||| ||||||||||    
T  28371001 tggtattcaaaatcattcaaattttaaaggattgtttaataaattgaattttggtgaattttgtgggattttctagtgaaatttta 28371086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 63 - 205
Target Start/End: Original strand, 5800049 - 5800181
Alignment:
Q  63 gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaa 162  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||          ||||||||||| |||||| ||  | ||||||| |||||||    
T  5800049 gtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat----------tggattttgtgagattttgtagagtaattttaacaagaaa 5800138  T
Q  163 aagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||| ||||||| || |||||| ||  ||||||||||||    
T  5800139 aagtctttaatgaaaagataagattttttgagattgtttttct 5800181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 49834988 - 49834890
Alignment:
Q  23 cttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttg 121  Q
    |||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| || |||||||||||||||  |||||||    
T  49834988 cttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 49834890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 63 - 192
Target Start/End: Complemental strand, 41581923 - 41581795
Alignment:
Q  63 gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaag-aa 161  Q
    |||| |||||||| | | ||||||||||||  ||| ||||||||||||||  ||||  |||  |||||||||||||||||| |||||||||| || | ||    
T  41581923 gtctcgtggtatttagagtcattcaaattttgaataattgtttaataaattggatt--gatatattttgtgggattttctagtgaaattttaacatgaaa 41581826  T
Q  162 aaagtctttcatgaaaacatgagatttctta 192  Q
    ||| | ||||||| |||||||||||||||||    
T  41581825 aaaatatttcatgtaaacatgagatttctta 41581795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 32684072 - 32684001
Alignment:
Q  134 ggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    ||||||| || || ||||||| ||||||||||||||||||||||| ||||||||| ||  ||||||||||||    
T  32684072 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttattgagattgtttttct 32684001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 32684123 - 32684065
Alignment:
Q  63 gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttg 121  Q
    |||| |||||||||||||||||||||||||| || |||||||||||||||  |||||||    
T  32684123 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 32684065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 49834897 - 49834826
Alignment:
Q  134 ggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    ||||||| || || ||||||| |||||| ||||||||||| |||| ||||||||||||  ||||||||||||    
T  49834897 ggattttgtagtgtaattttaacaagaagaagtctttcattaaaagatgagatttcttgagattgtttttct 49834826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 188
Target Start/End: Original strand, 50018322 - 50018437
Alignment:
Q  63 gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaa 162  Q
    |||| ||||||||||| |||||||||||||  || |||||||||||||||   ||||| ||||||||||          || || ||||||| |||||||    
T  50018322 gtcttgtggtattcaagatcattcaaattttgaaggattgtttaataaattgaattttaatggattttg----------tagtgtaattttaacaagaaa 50018411  T
Q  163 aagtctttcatgaaaacatgagattt 188  Q
    |||||||||| ||||| |||||||||    
T  50018412 aagtctttcaagaaaagatgagattt 50018437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 222
Target Start/End: Original strand, 25446224 - 25446258
Alignment:
Q  188 tcttaggattgtttttctcttttaagattttacta 222  Q
    |||||||||||||||| ||||||||||||||||||    
T  25446224 tcttaggattgtttttttcttttaagattttacta 25446258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 49469411 - 49469459
Alignment:
Q  172 atgaaaacatgagatttcttaggattgtttttctcttttaagattttact 221  Q
    ||||||||||||||||||||| |||||||||| |||| ||| ||||||||    
T  49469411 atgaaaacatgagatttctta-gattgtttttttcttctaaaattttact 49469459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 161; Significance: 8e-86; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 3206382 - 3206181
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  3206382 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 3206283  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  3206282 gatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttatgattgtttttttcttttaagattttac 3206183  T
Q  221 ta 222  Q
    ||    
T  3206182 ta 3206181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 10139323 - 10139122
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  10139323 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 10139224  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10139223 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 10139124  T
Q  221 ta 222  Q
    ||    
T  10139123 ta 10139122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 20498238 - 20498439
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  20498238 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 20498337  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20498338 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 20498437  T
Q  221 ta 222  Q
    ||    
T  20498438 ta 20498439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 996263 - 996062
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  996263 gtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 996164  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  996163 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 996064  T
Q  221 ta 222  Q
    ||    
T  996063 ta 996062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 19253856 - 19254057
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||    
T  19253856 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaataagatttt 19253955  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  19253956 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaaaattttac 19254055  T
Q  221 ta 222  Q
    ||    
T  19254056 ta 19254057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 21 - 219
Target Start/End: Complemental strand, 3999822 - 3999624
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  3999822 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 3999723  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagatttta 219  Q
    ||||||||||||||||||||||| ||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  3999722 gatggattttgtgggattttctagtgaaattttagaatgaaaaagtctttcataaaaacatgagatttcttaggattgtttttttcttttaagatttta 3999624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 22 - 222
Target Start/End: Complemental strand, 37820653 - 37820453
Alignment:
Q  22 tcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttg 121  Q
    ||||||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  37820653 tcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 37820554  T
Q  122 atggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttact 221  Q
    |||||||||||||||||||| | ||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||    
T  37820553 atggattttgtgggattttccagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaagattgtttttttcttttaagattttact 37820454  T
Q  222 a 222  Q
    |    
T  37820453 a 37820453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 6589593 - 6589795
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||| ||  ||| ||||||||||||||||||    
T  6589593 gtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaagaattatttaataaatcagatttt 6589692  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctc-ttttaagatttta 219  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  6589693 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttctttttaagatttta 6589792  T
Q  220 cta 222  Q
    |||    
T  6589793 cta 6589795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 29449035 - 29448833
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||| ||||||||||||||||| ||||||||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  29449035 gtcttgtgatattcaatcaagactctcaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 29448936  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctc-ttttaagatttta 219  Q
    ||||||||||||||||||||||| | |||||||||||  |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  29448935 gatggattttgtgggattttctagtaaaattttagcataaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttctttttaagatttta 29448836  T
Q  220 cta 222  Q
    |||    
T  29448835 cta 29448833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 35337764 - 35337963
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||  ||||||||||| || |||||||||||||||||||||||    
T  35337764 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaaaattcaaatttcgaaggattgtttaataaatcagatttt 35337863  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  35337864 gatggattttgtgggattttctagtgaaattttagcatgaaaaagt-tttcatgaaaacatgagattt-ttaggattgtttttttcttttaagattttac 35337961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 21 - 200
Target Start/End: Complemental strand, 33807976 - 33807796
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattt 119  Q
    |||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  33807976 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattt 33807877  T
Q  120 tgatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtt 200  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33807876 tgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtt 33807796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 25418395 - 25418595
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||| ||||||||||        ||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  25418395 gtcttgtggtattcaatcaagacttttaatcacttacaaaaaatctagcggtattcaaaatcattcaaatttgaaaggattgtttaataaatcagatttt 25418494  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||| ||| |||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  25418495 gatggattttgtgggattttctagtgaaattttggcatgaaaaagtatttcatgaaaacatgagattccttaggattgttttt-tcttttaagattttac 25418593  T
Q  221 ta 222  Q
    ||    
T  25418594 ta 25418595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 22 - 218
Target Start/End: Original strand, 54625622 - 54625818
Alignment:
Q  22 tcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttg 121  Q
    |||||| |||||||||||||||||||||||||||       ||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||    
T  54625622 tcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaattattcaaatttcgaaggattgtttaataaatcagattttg 54625721  T
Q  122 atggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagatttt 218  Q
    |||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||| ||||| ||||  |||||||||||||    
T  54625722 atggattttgtgggattttctagtgaaattttagcatgaaaaagtttttcatgaaaacatgagatttcttaagattgatttttgcttttaagatttt 54625818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 24 - 222
Target Start/End: Original strand, 40246876 - 40247073
Alignment:
Q  24 ttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgat 123  Q
    ||||||||||||||||||||| ||||||| ||       ||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||    
T  40246876 ttgtggtattcaatcaagactattaatcagttaaaaaaagtctagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgat 40246975  T
Q  124 ggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttacta 222  Q
    |||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||    
T  40246976 ggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttatgattgttttt-tcttttaagattttacta 40247073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 53929305 - 53929104
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||| |||| || || ||||||||||||||| |||||||    
T  53929305 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatatcgaacgattgtttaataaataagatttt 53929206  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    |||||||||||| |||||||||| ||||||||||||| |||||| ||||| ||||||||||||||||| |||||||||||||| |||||||| |||||||    
T  53929205 gatggattttgtaggattttctagtgaaattttagcatgaaaaaatctttaatgaaaacatgagattttttaggattgtttttttcttttaaaattttac 53929106  T
Q  221 ta 222  Q
    ||    
T  53929105 ta 53929104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 44762206 - 44762011
Alignment:
Q  29 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggatt 128  Q
    |||||||||||||||||||||||||||       ||||||||||||| ||||| |||||| |||| || |||||||||||||||||||||||||||||||    
T  44762206 gtattcaatcaagactcttaatcacttaaaaaaagtctagtggtatttaaaattattcaagtttcgaaggattgtttaataaatcagattttgatggatt 44762107  T
Q  129 ttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct--cttttaagattttacta 222  Q
    |||||||||||| || ||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||| |   ||||||||||||||||    
T  44762106 ttgtgggattttttagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaagattgttttttttctttttaagattttacta 44762011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 21 - 192
Target Start/End: Complemental strand, 33996718 - 33996547
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||        || ||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  33996718 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatccagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 33996619  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttctta 192  Q
    ||||||||||| ||||||||||| ||||||||||||| |||||||||||| || ||||||||||||||||||    
T  33996618 gatggattttgagggattttctagtgaaattttagcatgaaaaagtcttttataaaaacatgagatttctta 33996547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 52114557 - 52114759
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattt 119  Q
    |||||||||||||||||||||||| ||||||||||        ||||||||||||||||||| |||||||||||  | ||||||||||||||||||||||    
T  52114557 gtcttgtggtattcaatcaagacttttaatcacttaaaaaaaagtctagtggtattcaaaataattcaaatttcgcaggattgtttaataaatcagattt 52114656  T
Q  120 tgatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagatttta 219  Q
    |||| |||||||||| |||||||| | ||||||||||| |||||| |||||  ||||||||||||||||||||||||| ||||| |||||||||||||||    
T  52114657 tgatagattttgtggaattttctagtaaaattttagcatgaaaaaatcttttgtgaaaacatgagatttcttaggattatttttttcttttaagatttta 52114756  T
Q  220 cta 222  Q
    |||    
T  52114757 cta 52114759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 17946317 - 17946501
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| ||| ||||||||||||||||||||||||| |||||||||||||||  ||||||    
T  17946317 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttcaaaggattgtttaataaattggatttt 17946416  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  17946417 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttct 17946501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 6035230 - 6035031
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||| | || |||||||       |||| ||| |||||||||||||||||||||| ||  | |||||||||||| |||||||    
T  6035230 gtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttcgaagcaatgtttaataaattagatttt 6035131  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| | ||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||  |||||||| |||||||    
T  6035130 gatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaagattgtttt--tcttttaaaattttac 6035033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 110 - 222
Target Start/End: Complemental strand, 6131321 - 6131210
Alignment:
Q  110 aatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttt 209  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6131321 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt-tcttt 6131223  T
Q  210 taagattttacta 222  Q
    |||||||||||||    
T  6131222 taagattttacta 6131210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 22 - 183
Target Start/End: Complemental strand, 51699655 - 51699495
Alignment:
Q  22 tcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttg 121  Q
    ||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||| || ||||| ||||||||| ||||||||    
T  51699655 tcttgtggtattcaatcaagactcttaatcacttaaaaaaa-tctagtggtattcaaaatcattcaaatttcgaaggattggttaataaataagattttg 51699557  T
Q  122 atggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatga 183  Q
    ||| |||||||||||||||||| ||||||||||||| |||||| |||||| |||||||||||    
T  51699556 atgaattttgtgggattttctagtgaaattttagcatgaaaaaatctttcgtgaaaacatga 51699495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 18749641 - 18749825
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| |||||||||| || ||| || |||||||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  18749641 gtcttgaggtattcaataaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 18749740  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  18749741 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttct 18749825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 40897173 - 40897357
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       ||||  ||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  40897173 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 40897272  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||   |||||||||||    
T  40897273 gatggattttgtgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgatattgtttttct 40897357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 44906690 - 44906506
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  44906690 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 44906591  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||| ||||||||||||||| || || ||||||| |||||||| |||||||||||||| ||||||||||||  ||||||||||||    
T  44906590 gatgaattttgtgggattttgtagtgtaattttaacaagaaaatgtctttcatgaaaagatgagatttcttgagattgtttttct 44906506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 21 - 203
Target Start/End: Complemental strand, 36674307 - 36674125
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||  || |||||||||||||||  ||||||    
T  36674307 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggatttt 36674208  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  36674207 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 36674125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 68 - 205
Target Start/End: Original strand, 54628920 - 54629057
Alignment:
Q  68 gtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtc 167  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| || || ||||||| ||||||||||||    
T  54628920 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 54629019  T
Q  168 tttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||| |||| ||||||||||||  ||||||||||||    
T  54629020 tttcataaaaagatgagatttcttgagattgtttttct 54629057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 21 - 190
Target Start/End: Original strand, 29030035 - 29030203
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       |||| |||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  29030035 gtcttgtggtattcaatcaagactcttaatcacttaaaaaa-gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagatttt 29030133  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttct 190  Q
    |||||||||||||| ||||||||||||||||||| || |||    | ||| |||||||||||||||||||    
T  29030134 gatggattttgtggaattttctaatgaaattttaacatgaattttttttttatgaaaacatgagatttct 29030203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 11431555 - 11431737
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||| ||||||| || |||||||||||||||  ||||||    
T  11431555 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggatttt 11431654  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    | |||||||||||||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  11431655 ggtggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 11431737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 21 - 203
Target Start/End: Complemental strand, 34484207 - 34484025
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||       || | |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  34484207 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 34484108  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||||||||||||| || || ||||||| ||||||||| ||||||||||||| ||||||||||||  ||||||||||    
T  34484107 gatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttgagattgttttt 34484025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 63 - 203
Target Start/End: Original strand, 32580247 - 32580387
Alignment:
Q  63 gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaa 162  Q
    |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||||||||||||| |||||||| || || ||||||| |||||||    
T  32580247 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgagggattttgtagtgtaattttaacaagaaa 32580346  T
Q  163 aagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  32580347 aagtctttcatgaaaagatgagatttcttgagattgttttt 32580387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 26107290 - 26107474
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  26107290 gtcttgaggtattcaatcaagacttttcatcaattaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 26107389  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    ||||||||||||| |||||| || || ||||||| ||||||||||| |||||| |||| ||||||||||||  ||||||||||||    
T  26107390 gatggattttgtgtgattttgtagtgtaattttaacaagaaaaagtatttcataaaaagatgagatttcttgagattgtttttct 26107474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 1440126 - 1440007
Alignment:
Q  24 ttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgat 123  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  1440126 ttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttccaaggattgtttaataaatcagattttgat 1440027  T
Q  124 ggattttgtgggattttcta 143  Q
    ||||||| ||||||||||||    
T  1440026 ggattttatgggattttcta 1440007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 69 - 203
Target Start/End: Original strand, 5825139 - 5825273
Alignment:
Q  69 tggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtct 168  Q
    ||||||||||||||||||||||||  || |||||||||||||||  ||||||||| |||||||||||||||| || ||||||| ||||| ||||||| ||    
T  5825139 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgtgggattttttagtgaaattctagcatgaaaaaggct 5825238  T
Q  169 ttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||||||||||||||||| ||||||||||    
T  5825239 ttcatgaaaacatgagatttcttatgattgttttt 5825273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 28 - 205
Target Start/End: Original strand, 52810414 - 52810591
Alignment:
Q  28 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggat 127  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||  ||||||||||||||||||   ||||||||||||    
T  52810414 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaatgattgtttaataaattgaattttgatggat 52810513  T
Q  128 tttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    ||||||||||||| ||  | ||||||| ||||||||| ||||||||||||| ||||||||||||  ||||||||||||    
T  52810514 tttgtgggattttgtagcgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttgagattgtttttct 52810591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 48379186 - 48379370
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||| ||||| || |||||||       |||| |||||||||||||||||||||||||| || |||||||||||||||   |||||    
T  48379186 gtcttgaggtattcaatctagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaatttt 48379285  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||||||||||| || || |||||||  ||||||| |||||||||||||| || |||||||||  ||||||||||||    
T  48379286 gatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcatgaaaagatcagatttcttgagattgtttttct 48379370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 51737903 - 51737719
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  51737903 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 51737804  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||||||||||| |  || ||||||| |||||||||||||||||| |||| || ||  |||||  ||||||||||||    
T  51737803 gatggattttgtgggattttgttgtgtaattttaacaagaaaaagtctttcataaaaagataagtattcttgagattgtttttct 51737719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 22057793 - 22057933
Alignment:
Q  23 cttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttga 122  Q
    |||||||||||| |||||||||||| |||||||        |||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||||    
T  22057793 cttgtggtattccatcaagactcttgatcacttaaaaaaaatctagtggtatttaaaatcattcaaatttcgatggattgtttaataaatcagattttga 22057892  T
Q  123 tggattttgtgggattttctaatgaaattttagcaagaaaa 163  Q
    ||||||||||||||||||||| |||||||||| || |||||    
T  22057893 tggattttgtgggattttctagtgaaattttaacatgaaaa 22057933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 68 - 205
Target Start/End: Complemental strand, 31646414 - 31646279
Alignment:
Q  68 gtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtc 167  Q
    |||||||||||||||||||||||||| || ||||||||||| |||  |||||||||||||||||||||||||| || || ||||||| ||||||||||||    
T  31646414 gtggtattcaaaatcattcaaatttcgaaagattgtttaatgaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 31646315  T
Q  168 tttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    ||||||||||  ||||||||||||  ||||||| ||||    
T  31646314 tttcatgaaa--atgagatttcttgagattgttattct 31646279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 98 - 222
Target Start/End: Complemental strand, 1439994 - 1439869
Alignment:
Q  98 gattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggatt 197  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||| | ||||||| | | |||||||||||||| ||||||||||||||| ||||||||    
T  1439994 gattgtttaataaattagattttgatagattttgtgggattttctagtaaaattttggtatgaaaaagtctttcacgaaaacatgagattttttaggatt 1439895  T
Q  198 gtttttctc-ttttaagattttacta 222  Q
    |||||| || ||||||||||||||||    
T  1439894 gtttttttctttttaagattttacta 1439869  T

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Target: chr3; HSP #41
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 27 - 203
Target Start/End: Original strand, 27899379 - 27899545
Alignment:
Q  27 tggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatgga 126  Q
    |||||||||||||||||||||  ||| ||       |||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||         
T  27899379 tggtattcaatcaagactctttgtcatttaaaaaaagtctggtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg----- 27899473  T
Q  127 ttttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
         | |||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||    
T  27899474 -----taggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttatgattgttttt 27899545  T

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Target: chr3; HSP #42
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 63 - 203
Target Start/End: Complemental strand, 50903375 - 50903235
Alignment:
Q  63 gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaa 162  Q
    |||| ||||||||||||||||||||||||   || |||||||||||||||  |||||||||||||||||||||||||| || || ||||||| |||||||    
T  50903375 gtcttgtggtattcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 50903276  T
Q  163 aagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    || ||||| ||||||| ||||||||||||  ||||||||||    
T  50903275 aaatcttttatgaaaatatgagatttcttgagattgttttt 50903235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 52618142 - 52617964
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  52618142 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 52618043  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||||||||||| || || ||||||      || ||||||||||| |||| ||||||||||||  ||||||||||||    
T  52618042 gatggattttgtgggattttgtagtgtaatttt------aacaagtctttcataaaaagatgagatttcttgagattgtttttct 52617964  T

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Target: chr3; HSP #44
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 64 - 222
Target Start/End: Original strand, 52079999 - 52080142
Alignment:
Q  64 tctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaa 163  Q
    |||||||||||||||||||||||||||||  || |||||||||||||||||          ||||||||||||||||||||||||||||||||| |||||    
T  52079999 tctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatca----------gattttgtgggattttctaatgaaattttagcatgaaaa 52080088  T
Q  164 agtctttcatgaaaacatgagatttcttaggattg-tttttctcttttaagattttacta 222  Q
    |||      |||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  52080089 agt------tgaaaacatgagatttcttaggattgttttttttcttttaagattttacta 52080142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 21 - 187
Target Start/End: Original strand, 20833021 - 20833187
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||| | || |||||||       |||| ||||||||||||||||||||||||   || |||||||||||||||  ||||||    
T  20833021 gtcttgaggtattcaatcaagaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattcggaaggattgtttaataaattggatttt 20833120  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatt 187  Q
    ||||||||||||| |||||  || || ||||||| ||||||||||| ||||||||||| || |||||    
T  20833121 gatggattttgtgagatttattagtgtaattttaacaagaaaaagtatttcatgaaaagataagatt 20833187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 10728818 - 10728644
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| |||||||| ||||||||||||||||  || |||||||||||||||  ||||||    
T  10728818 gtcttgaggtattcaatcaagacttttcatcacttacaaaaagtcttgtggtatttaaaatcattcaaatttggaaggattgtttaataaattggatttt 10728719  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||          || || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  10728718 gatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttct 10728644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 37454890 - 37455064
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| | ||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||| ||||||||||||||||||            
T  37454890 gtcttgagatattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaat-------- 37454981  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
      || ||||||||||||||| || || ||||||| ||||||||||| ||||||||||| ||||||||||||  ||||||||||||    
T  37454982 --tgaattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcttgagattgtttttct 37455064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 63 - 205
Target Start/End: Complemental strand, 39842619 - 39842487
Alignment:
Q  63 gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaa 162  Q
    |||| ||| |||||||||||||||||||||| ||  |||||||||||||| ||||||||| |||||||||          |||| ||||||| |||||||    
T  39842619 gtctcgtgatattcaaaatcattcaaatttcgaagaattgtttaataaattagattttgacggattttgt----------aatgtaattttaacaagaaa 39842530  T
Q  163 aagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||||||| |||||||||||| |||||||||||||    
T  39842529 aagtctttcatgaaaagatgagatttcttgggattgtttttct 39842487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 63 - 205
Target Start/End: Complemental strand, 50762185 - 50762053
Alignment:
Q  63 gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaa 162  Q
    |||| ||||||||||||||||||| |||||| ||||||||||| ||||||  |||||||||||||||||| |          || ||||||| |||||||    
T  50762185 gtcttgtggtattcaaaatcattctaatttcgaatgattgtttgataaattggattttgatggattttgtag----------tgtaattttaacaagaaa 50762096  T
Q  163 aagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||||||| ||||||||||||  ||||||||||||    
T  50762095 aagtctttcatgaaaagatgagatttcttgagattgtttttct 50762053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 55235264 - 55235359
Alignment:
Q  72 tattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatgga-ttttgtgggattttctaatgaaattttagcaagaaaaagt 166  Q
    |||||||||||||||||||||| || |||||||||||||||  | |||||||||| |||||||||||||||||||||||||||||||  |||||||    
T  55235264 tattcaaaatcattcaaatttcgaaagattgtttaataaattggtttttgatggatttttgtgggattttctaatgaaattttagcataaaaaagt 55235359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 39038069 - 39038243
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| ||||||| |||||||||||||||||| ||  ||||||||||||||  ||||||    
T  39038069 gtcttgaggtattcaatcaagacttttcatcactttaaaaaagtcttgtggtatccaaaatcattcaaatttcgaagaattgtttaataaattggatttt 39038168  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||          || || ||||||| |||||||||||||||||| |||| ||||||||||||   |||||||||||    
T  39038169 gatggattttg----------tagtgtaattttaacaagaaaaagtctttcataaaaagatgagatttcttgaaattgtttttct 39038243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 44276418 - 44276588
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||| | || |||||||       ||||  |||||||||||||||||||||||    | |||||||||||||||            
T  44276418 gtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggtattcaaaatcattcaaatt----aggattgtttaataaat-------- 44276505  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
      ||||||||||||||||||||| |||||||||| ||||||||| ||||||||||| ||||||||||| || ||||| |||||||    
T  44276506 --tggattttgtgggattttctagtgaaattttaacaagaaaaaatctttcatgaagacatgagattttttgggattatttttct 44276588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 33807733 - 33807678
Alignment:
Q  145 tgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtt 200  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33807733 tgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtt 33807678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 10660564 - 10660675
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||       || | |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  10660564 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtattgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 10660663  T
Q  121 gatggattttgt 132  Q
    ||||||||||||    
T  10660664 gatggattttgt 10660675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 23753563 - 23753463
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  23753563 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 23753464  T
Q  121 g 121  Q
    |    
T  23753463 g 23753463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 45862983 - 45863054
Alignment:
Q  134 ggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    ||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  45862983 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttct 45863054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 539581 - 539476
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||| | || |||| ||       |||| |||||||||||||||||||||||||| || |||| ||||||||||  ||||||    
T  539581 gtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattggatttt 539482  T
Q  121 gatgga 126  Q
    ||||||    
T  539481 gatgga 539476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 15492942 - 15492862
Alignment:
Q  123 tggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||| |||| ||||| |||||||||| ||||||||| |||||||||||  ||| |||||||||  ||||||||||    
T  15492942 tggattttgtaggatattctagtgaaattttaacaagaaaaaatctttcatgaagtcataagatttcttgagattgttttt 15492862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 180
Target Start/End: Original strand, 6975817 - 6975924
Alignment:
Q  63 gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaa 162  Q
    |||| |||||||||||||||||||||||||| ||  ||| |||| |||||          |||| |||||||||||||||| | |||||| |||| ||||    
T  6975817 gtcttgtggtattcaaaatcattcaaatttcgaagaattatttactaaat----------tggaatttgtgggattttctagtaaaatttgagcatgaaa 6975906  T
Q  163 aagtctttcatgaaaaca 180  Q
     |||||||||||||||||    
T  6975907 cagtctttcatgaaaaca 6975924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 23753470 - 23753402
Alignment:
Q  134 ggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    ||||||| || || ||||||| ||||||||||||||||||| ||| ||||||||||||  ||||||||||    
T  23753470 ggattttgtagtgtaattttaacaagaaaaagtctttcatg-aaagatgagatttcttgagattgttttt 23753402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 12103733 - 12103789
Alignment:
Q  135 gattttctaatgaaattttagcaagaaaaagtctttcatgaaaaca-tgagatttct 190  Q
    ||||||||| |||||||||| |||||| |||||||||||||| ||| ||||||||||    
T  12103733 gattttctagtgaaattttaacaagaataagtctttcatgaagacattgagatttct 12103789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 119
Target Start/End: Complemental strand, 23535984 - 23535890
Alignment:
Q  24 ttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattt 119  Q
    |||||| |||||||||| |||||| |||||||       |||| |||||||||||||||||||||||||  || ||| ||||||| ||| ||||||    
T  23535984 ttgtggcattcaatcaa-actcttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttagaaggatcgtttaattaattagattt 23535890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 52
Target Start/End: Complemental strand, 6131345 - 6131317
Alignment:
Q  24 ttgtggtattcaatcaagactcttaatca 52  Q
    |||||||||||||||||||||||||||||    
T  6131345 ttgtggtattcaatcaagactcttaatca 6131317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 161; Significance: 8e-86; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 31170803 - 31170602
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  31170803 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttccaaggattgtttaataaatcagatttt 31170704  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31170703 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 31170604  T
Q  221 ta 222  Q
    ||    
T  31170603 ta 31170602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 16269722 - 16269923
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  16269722 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 16269821  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    |||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16269822 gatggattttgtgggattttatagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 16269921  T
Q  221 ta 222  Q
    ||    
T  16269922 ta 16269923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 20605267 - 20605468
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  20605267 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaatttcgaaggattgtttaataaatcagatttt 20605366  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20605367 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 20605466  T
Q  221 ta 222  Q
    ||    
T  20605467 ta 20605468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 24776386 - 24776586
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  24776386 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 24776485  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24776486 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt-tcttttaagattttac 24776584  T
Q  221 ta 222  Q
    ||    
T  24776585 ta 24776586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 14198756 - 14198555
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  14198756 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 14198657  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14198656 gatggattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 14198557  T
Q  221 ta 222  Q
    ||    
T  14198556 ta 14198555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 305644 - 305443
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||     
T  305644 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattttgaatgattgtttaataaatcagatttc 305545  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||| ||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  305544 gatggattttgtgagattttctagtgaaattttagaatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttatttcttttaagattttac 305445  T
Q  221 ta 222  Q
    ||    
T  305444 ta 305443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 12407411 - 12407612
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||| ||||||||||||||||       ||||||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  12407411 gtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagatttt 12407510  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  12407511 gatggattttgtgggattttctagtgaaattttaccatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttttcttttaagattttac 12407610  T
Q  221 ta 222  Q
    ||    
T  12407611 ta 12407612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 43847677 - 43847878
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||||||| ||||||||||||||||||||||| || ||||||||||||||||||| |||    
T  43847677 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagttgtattcaaaatcattcaaatttcgaaggattgtttaataaatcagaattt 43847776  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    |||||||||||||| |||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43847777 gatggattttgtggaattttctagtgaaattttagcatgaaaaagtctgtcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 43847876  T
Q  221 ta 222  Q
    ||    
T  43847877 ta 43847878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 21 - 221
Target Start/End: Complemental strand, 5093226 - 5093025
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    ||||||||||||||||||||||| |||||||||||       ||||||| ||||||||||||||||||||||  || |||||||||||||||||||||||    
T  5093226 gtcttgtggtattcaatcaagacgcttaatcacttaaaaaaagtctagtagtattcaaaatcattcaaattttgaaggattgtttaataaatcagatttt 5093127  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgt-ttttctcttttaagatttta 219  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||    
T  5093126 gatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattgttttttttcttttaagatttta 5093027  T
Q  220 ct 221  Q
    ||    
T  5093026 ct 5093025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 35317093 - 35317294
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||  ||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  35317093 gtcttgtaatattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 35317192  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    |||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||  ||||||||| ||||||||||||||||    
T  35317193 gatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaacattgtttttttcttttaagattttac 35317292  T
Q  221 ta 222  Q
    ||    
T  35317293 ta 35317294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 22551942 - 22551741
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||| ||||||||||       ||||||||||||||||||| ||||||||||| |||||||||||| ||||| | |||||    
T  22551942 gtcttgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaattattcaaatttcgaatgattgtttattaaattaaatttt 22551843  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  22551842 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcatgaaaacatgagatttcttatgattgttttttccttttaagattttac 22551743  T
Q  221 ta 222  Q
    ||    
T  22551742 ta 22551741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 9120157 - 9120358
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||| ||||||||||||| ||||||||||||        ||||||| |||||||||||||||| |||| ||| ||||||||||||||| |||||||    
T  9120157 gtcttgtgttattcaatcaagattcttaatcacttaaaaaaaatctagtgatattcaaaatcattcagattttaaaggattgtttaataaattagatttt 9120256  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||| | | |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9120257 gatggattttgtgggattttctagtgaaattttagtatggaaaaatctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 9120356  T
Q  221 ta 222  Q
    ||    
T  9120357 ta 9120358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 44765806 - 44765998
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||| ||||||||||||||||       ||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||    
T  44765806 gtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaataagatttt 44765905  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| |||||||||||||          |||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  44765906 gatggattttgtgggattttctagtgaaattttagca---------ttttcatgaaaacatgagatttcttaggattgtttttttcttttaaaattttac 44765996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 1789473 - 1789676
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    ||||| || ||||||||||| ||||||||||||||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  1789473 gtcttatgatattcaatcaaaactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 1789572  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaa-ca-tgagatttcttaggattgtttttctcttttaagatttt 218  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| || | | | ||||||||||| ||||| |||||||| |||||    
T  1789573 gatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatcaaaatcattcaaaattcttaggattatttttttcttttaaaatttt 1789672  T
Q  219 acta 222  Q
    ||||    
T  1789673 acta 1789676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 25 - 222
Target Start/End: Original strand, 32125285 - 32125486
Alignment:
Q  25 tgtggtattcaatcaagactcttaat---cacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttg 121  Q
    ||||||||||||||||||||||||||   || ||       ||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  32125285 tgtggtattcaatcaagactcttaatgatcatttaaaaaaagtcaagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 32125384  T
Q  122 atggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttctt-aggattgtttttctcttttaagattttac 220  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||||||||||||| |||||||||||| |  ||||||||| ||||||||||||||||    
T  32125385 atggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaatatgagatttcttaaaaattgtttttttcttttaagattttac 32125484  T
Q  221 ta 222  Q
    ||    
T  32125485 ta 32125486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 28 - 205
Target Start/End: Original strand, 10657444 - 10657621
Alignment:
Q  28 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggat 127  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||    
T  10657444 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggat 10657543  T
Q  128 tttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    ||||||||||||| || || ||||||| ||||||||||| ||||||||||| |||| |||||||  ||||||||||||    
T  10657544 tttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgaaatttcttgagattgtttttct 10657621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 28844586 - 28844770
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| || ||||||||||||||| |||||||    
T  28844586 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattagatttt 28844685  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||||| ||||| || || |||||||  ||||||||||||||||| |||| ||||||||||||  ||||||||||||    
T  28844686 gatggattttgtggaattttgtagtgtaattttaataagaaaaagtctttcataaaaagatgagatttcttgagattgtttttct 28844770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 33135654 - 33135837
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  33135654 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 33135753  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||||||||||| || || ||||||| |||||||||||||||||| |||| ||||||||||||  ||||||||||||    
T  33135754 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat-aaaaaatgagatttcttgagattgtttttct 33135837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 25288190 - 25288374
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| |||||||| |||||||| || |||||||        ||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  25288190 gtcttgaggtattcattcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 25288289  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||| ||||||||||||||| || || ||||||| ||||| || |||||||||||||| ||||||||||||  ||||||||||||    
T  25288290 gatgaattttgtgggattttgtagtgtaattttaacaagagaacgtctttcatgaaaagatgagatttcttgagattgtttttct 25288374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 18177298 - 18177480
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||       || | |||||||||||||||||||||||||| || ||||||||||| |||  ||||||    
T  18177298 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattcaaatttcgaaggattgtttaattaattggatttt 18177397  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||| || |||| ||||||||||||  ||||||||||    
T  18177398 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttaataaaaagatgagatttcttgagattgttttt 18177480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 63 - 203
Target Start/End: Original strand, 26788859 - 26788996
Alignment:
Q  63 gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaa 162  Q
    |||| |||||||||||||||||||||||||  || |||||||||||||||  |||||||||||||||||||||||||| || || ||||||| |||||||    
T  26788859 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 26788958  T
Q  163 aagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||||   || ||||||||||||  ||||||||||    
T  26788959 aagtctttcat---aagatgagatttcttgagattgttttt 26788996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 28740462 - 28740288
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  28740462 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 28740363  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    ||||||||||||||          || ||||||| |||||||||||||||||| |||| ||||||||||||  ||||||||||||    
T  28740362 gatggattttgtgg----------tgtaattttaacaagaaaaagtctttcataaaaagatgagatttcttgagattgtttttct 28740288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 26601379 - 26601191
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    ||||||| |||||||||||||||||||||||||||       |||  |||||||||||||||||||||||||| |||| ||||||||||||||||||       
T  26601379 gtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcacgtggtattcaaaatcattcaaatttcgaatgtttgtttaataaatcagat--- 26601283  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
           |||||||||||||||| ||||| |||| | |  |||||| ||| |||||||||| |||||| |||||||||||||| ||||||||||||||||    
T  26601282 -------tttgtgggattttctagtgaaactttaac-attaaaagtttttgatgaaaacat-agattttttaggattgttttt-tcttttaagattttac 26601193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 80 - 203
Target Start/End: Original strand, 43078653 - 43078776
Alignment:
Q  80 atcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaac 179  Q
    |||||||||||||| ||||||||||||||||||  |||||| ||||||||||||||||||| || || ||||||| || ||||||||||||||| ||||     
T  43078653 atcattcaaatttcgaatgattgtttaataaattggattttcatggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaag 43078752  T
Q  180 atgagatttcttaggattgttttt 203  Q
    || |||||||||  ||||||||||    
T  43078753 ataagatttcttgagattgttttt 43078776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 72 - 205
Target Start/End: Complemental strand, 10125418 - 10125295
Alignment:
Q  72 tattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttc 171  Q
    ||||||||||||||||||||||||| |||||||||||||||          || ||||||||||||||| || |||||||||| ||||||||||||||||    
T  10125418 tattcaaaatcattcaaatttcaaaggattgtttaataaat----------tgaattttgtgggattttttagtgaaattttaacaagaaaaagtctttc 10125329  T
Q  172 atgaaaacatgagatttcttaggattgtttttct 205  Q
    || |||||| ||||||||||| ||||||||||||    
T  10125328 ataaaaacacgagatttcttaagattgtttttct 10125295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 3463703 - 3463875
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||| ||||||||||||| || |||| ||       |||| |||||||| |||||||||||| ||||||| |||||||||||||||  ||||||    
T  3463703 gtcttgaggtgttcaatcaagacttttcatcatttaaaaaaagtcttgtggtatttaaaatcattcaattttcaaaggattgtttaataaattggatttt 3463802  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||||          || || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  3463803 gatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaatatgagatttcttgagattgttttt 3463875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 30 - 205
Target Start/End: Complemental strand, 13833592 - 13833427
Alignment:
Q  30 tattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattt 129  Q
    ||||||||||||||| || |||||||       ||||  ||||||||||||||||||||||||  || |||||||||||||||          |||||||    
T  13833592 tattcaatcaagacttttcatcacttaaaaaaagtcttctggtattcaaaatcattcaaattttgaaggattgtttaataaat----------tggattt 13833503  T
Q  130 tgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    ||||||||||| || || ||||||| |||||||||||||||||||| || ||||||||||||  ||||| ||||||    
T  13833502 tgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgacaagatgagatttcttgagattgcttttct 13833427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 7026635 - 7026746
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  7026635 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 7026734  T
Q  121 gatggattttgt 132  Q
    ||||||||||||    
T  7026735 gatggattttgt 7026746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 3574878 - 3574978
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||| || |||||||||||||||  ||||||    
T  3574878 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 3574977  T
Q  121 g 121  Q
    |    
T  3574978 g 3574978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 69 - 205
Target Start/End: Original strand, 379016 - 379142
Alignment:
Q  69 tggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtct 168  Q
    ||||||||||||||||||||||||  || |||||||||||||||  ||||||||| |||||||          || || ||||||| ||||||||| ||     
T  379016 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttg----------tagtgtaattttaacaagaaaaaatcg 379105  T
Q  169 ttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||| ||||||||| ||  ||||||||||||    
T  379106 ttcatgaaaagatgagatttattgagattgtttttct 379142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 215404 - 215320
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgttt 105  Q
    |||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||| |||||| ||||||||    
T  215404 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaacttcaaaggattgttt 215320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 6224633 - 6224562
Alignment:
Q  134 ggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    ||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||   |||||||||||    
T  6224633 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgatattgtttttct 6224562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 215280 - 215233
Alignment:
Q  158 agaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    ||||||||||||||||||||| |||||||||| |  ||||||||||||    
T  215280 agaaaaagtctttcatgaaaagatgagatttcatgagattgtttttct 215233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 7027053 - 7027100
Alignment:
Q  156 caagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    ||||||||| ||||||||||||| ||||||||||||  ||||||||||    
T  7027053 caagaaaaaatctttcatgaaaagatgagatttcttgagattgttttt 7027100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 6224684 - 6224626
Alignment:
Q  63 gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttg 121  Q
    |||| |||||||||||||| ||||||||||| || |||| ||||||||||  |||||||    
T  6224684 gtcttgtggtattcaaaattattcaaatttcgaaggattatttaataaattggattttg 6224626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 153; Significance: 5e-81; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 15210 - 15009
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    ||||||| |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  15210 gtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 15111  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  15110 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttaggattgtttttttcttttaagattttac 15011  T
Q  221 ta 222  Q
    ||    
T  15010 ta 15009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 153; Significance: 5e-81; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 15853 - 15652
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    ||||||| |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  15853 gtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 15754  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  15753 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttaggattgtttttttcttttaagattttac 15654  T
Q  221 ta 222  Q
    ||    
T  15653 ta 15652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 153; Significance: 5e-81; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 38781 - 38581
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||    
T  38781 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataa-tcagatttt 38683  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38682 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 38583  T
Q  221 ta 222  Q
    ||    
T  38582 ta 38581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 150; Significance: 3e-79; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 21 - 219
Target Start/End: Original strand, 21147097 - 21147294
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  21147097 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 21147196  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagatttta 219  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  21147197 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttc-tttaagatttta 21147294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 7016915 - 7016714
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    ||||||| |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  7016915 gtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 7016816  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  7016815 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttagaattgtttttttcttttaagattttac 7016716  T
Q  221 ta 222  Q
    ||    
T  7016715 ta 7016714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 33656217 - 33656017
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||        |||| ||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  33656217 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 33656118  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  33656117 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaatatgagatttcttaggattgttttt-tcttttaagattttac 33656019  T
Q  221 ta 222  Q
    ||    
T  33656018 ta 33656017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 5273095 - 5272894
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    ||||| |||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5273095 gtcttatggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 5272996  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||   ||||||||  ||||||| |||||||    
T  5272995 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaattttgttttttacttttaaaattttac 5272896  T
Q  221 ta 222  Q
    ||    
T  5272895 ta 5272894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 27459125 - 27458925
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    ||||||| |||||||||||||||||||||||||||       ||||||||||||||||||||||||| ||||  || ||||||||||||||| |||||||    
T  27459125 gtcttgtagtattcaatcaagactcttaatcacttaaaaaa-gtctagtggtattcaaaatcattcagattttgaaggattgtttaataaattagatttt 27459027  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| || ||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  27459026 gatggattttgtgggattttctagtgaaattttagcatgaaaaaatcattcatgaaaacatgatatttcttaggattgtttttttcttttaagattttac 27458927  T
Q  221 ta 222  Q
    ||    
T  27458926 ta 27458925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 849177 - 849370
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  849177 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 849276  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatg-aaaacatgagatttcttaggattgtttttctcttttaagatttta 219  Q
    ||| ||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||         |||||||||||| |||||||||||||||    
T  849277 gatagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaaacatg---------aggattgtttttttcttttaagatttta 849367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 32158074 - 32157869
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattt 119  Q
    ||||||||||||||||||||||| | |||||||||        ||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||    
T  32158074 gtcttgtggtattcaatcaagacccctaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaattagattt 32157975  T
Q  120 tgatggattttgtgggattttctaatgaaattttagcaagaaaa---agtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagatt 216  Q
    ||| |||||||||||||||||||| | ||||||||||| |||||   |||||||||||||||||||||||||||||  |||||| || ||||||||||||    
T  32157974 tgacggattttgtgggattttctagtaaaattttagcacgaaaaaatagtctttcatgaaaacatgagatttcttaaaattgttcttttcttttaagatt 32157875  T
Q  217 ttacta 222  Q
    ||||||    
T  32157874 ttacta 32157869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 25 - 221
Target Start/End: Original strand, 139307 - 139504
Alignment:
Q  25 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatg 124  Q
    |||||||||||||||||||| ||||||||||       ||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||    
T  139307 tgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaaccagattttgatg 139406  T
Q  125 gattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggatt-gtttttctcttttaagattttact 221  Q
    |||||||| |||||||| | ||||||||||  | ||||||||||||||| ||||||||||||||||||  |||  ||||| |||||||||||||||||    
T  139407 gattttgttggattttccagtgaaattttaatatgaaaaagtctttcataaaaacatgagatttcttaaaattattttttttcttttaagattttact 139504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 1152279 - 1152095
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| |  |||||||||||||||  ||||||    
T  1152279 gtcttgaggtattcaatcaagactttttatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgagggattgtttaataaattggatttt 1152180  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||    
T  1152179 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttcttaagattgtttttct 1152095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 21 - 203
Target Start/End: Complemental strand, 14000281 - 14000099
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||  || |||||||||||||||  ||||||    
T  14000281 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggatttt 14000182  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  14000181 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 14000099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 26 - 219
Target Start/End: Original strand, 9689693 - 9689884
Alignment:
Q  26 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatgg 125  Q
    |||||||||||||||||||||| |||||||       |||| |||||||| ||||||||| ||||||| ||||||||||| |||||| ||||||||||||    
T  9689693 gtggtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatttaaaatcatt-aaatttcgaatgattgtttgataaattagattttgatgg 9689791  T
Q  126 attttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagatttta 219  Q
    ||| |||| ||||||||  | ||||||||  | ||||||||||||||| ||||||| |||||||||| |||||||||| |||||||||||||||    
T  9689792 attgtgtgagattttcttgtaaaattttattatgaaaaagtctttcataaaaacataagatttcttatgattgttttt-tcttttaagatttta 9689884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 23 - 203
Target Start/End: Complemental strand, 4550431 - 4550251
Alignment:
Q  23 cttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttga 122  Q
    |||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||||    
T  4550431 cttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttga 4550332  T
Q  123 tggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||||| ||||| || || ||||||| ||||||| ||||||||||||||| ||||||||| ||  ||||||||||    
T  4550331 tggattttgtggaattttgtagtgtaattttaacaagaaagagtctttcatgaaaagatgagatttgttgagattgttttt 4550251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 13925961 - 13926145
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||| | || || ||||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  13925961 gtcttgaggtattcaatcaagatttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 13926060  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||||| ||||| |||| |||||||  ||||||||||||    
T  13926061 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaagatgatatttcttgagattgtttttct 13926145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 39852375 - 39852557
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| |||||||||||||||||  | |||| ||       |||| |||||||||||||||||||||||||| || ||||||||| |||||  ||||||    
T  39852375 gtcttgaggtattcaatcaagacttctcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggatttt 39852474  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||| ||||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  39852475 gatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 39852557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 7947749 - 7947565
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| | | |||||||||||||||||||||| || |||||||||||||||  ||||||    
T  7947749 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgatattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 7947650  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||||| ||||| || || ||||||| ||||||||||||||||||||||| | ||||||||||   |||||||||||    
T  7947649 gatggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagaagagatttcttgaaattgtttttct 7947565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 6460830 - 6461008
Alignment:
Q  29 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggatt 128  Q
    |||||||||||||||||||||||| ||        |||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||    
T  6460830 gtattcaatcaagactcttaatcatttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaaggtttgtttaataaatcagattttgatggatt 6460929  T
Q  129 ttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttacta 222  Q
    ||| ||||||||||| ||||||||||               ||||||||| ||||||||||||| |||||||||| | ||||||||||||||||    
T  6460930 ttgagggattttctagtgaaatttta---------------tcatgaaaaaatgagatttcttaagattgttttttttttttaagattttacta 6461008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 21 - 204
Target Start/End: Original strand, 22746327 - 22746502
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||| ||| || |||||||       |||| ||| |||||||||||||||||||||| ||||||||||||||||||   |||||    
T  22746327 gtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaatgattgtttaataaattgaatttt 22746426  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttc 204  Q
    |||||||||||||||        ||| ||||||| ||||||||| ||||||||||||| || |||||||||| |||||||||||    
T  22746427 gatggattttgtggg--------atgtaattttaacaagaaaaactctttcatgaaaagataagatttcttaagattgtttttc 22746502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 4240628 - 4240454
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  4240628 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 4240529  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||          || || ||||||| ||||||||||||||||||||| | ||||||||||||  ||||||||||||    
T  4240528 gatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaatagatgagatttcttgagattgtttttct 4240454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 27 - 157
Target Start/End: Complemental strand, 14465397 - 14465267
Alignment:
Q  27 tggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatgga 126  Q
    ||||||||||||||||||||| ||| |||       |||| |||||||||||||||||||||||||| || |||||||||||||||| |||||||||| |    
T  14465397 tggtattcaatcaagactcttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcggattttgatgaa 14465298  T
Q  127 ttttgtgggattttctaatgaaattttagca 157  Q
    |||||||| |||||||| | | |||||||||    
T  14465297 ttttgtggaattttctagtaatattttagca 14465267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 68 - 205
Target Start/End: Original strand, 5949185 - 5949312
Alignment:
Q  68 gtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtc 167  Q
    |||||||||||||||||||||||||| || |||||||||||||||  |||||||||||||||||          || || ||||||| ||||||||||||    
T  5949185 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtc 5949274  T
Q  168 tttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    ||||||||||| ||||||||||||  ||||||||||||    
T  5949275 tttcatgaaaagatgagatttcttgagattgtttttct 5949312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 219
Target Start/End: Complemental strand, 9220883 - 9220696
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||| |||||||||||||||||| |||||||       ||||  || |||||||||||||||||||||| || ||||||||||| ||| ||| |||    
T  9220883 gtcttgtgatattcaatcaagactctttatcacttaaaaaaagtcttatgatattcaaaatcattcaaatttctaaggattgtttaatgaattagaattt 9220784  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagatttta 219  Q
    |          | ||||||| || | |||||||| || ||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||    
T  9220783 g----------taggattttatagtaaaattttaacacgaaaaagtctttcgtgaaaacatgatatttcttaggattgttttt-tcttttaagatttta 9220696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 1461314 - 1461140
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| | | |||||||||||||||||||||| || |||||||||||||||  ||||||    
T  1461314 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgctattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 1461215  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||          || || ||||||| ||||||||| ||||||||||||| ||||||||||||  ||||||||||||    
T  1461214 gatggattttg----------tactgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttgagattgtttttct 1461140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 21 - 203
Target Start/End: Complemental strand, 40013878 - 40013706
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||        ||| ||| |||||||||||||||||||||| || ||||||||||| |||  ||||||    
T  40013878 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtgttattcaaaatcattcaaatttcgaaggattgtttaatcaattggatttt 40013779  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
     ||||||||||| |          || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  40013778 aatggattttgtag----------tgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 40013706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 37013944 - 37014044
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| | |||||||||||||||||||||||| || | |||||||||||||  ||||||    
T  37013944 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcggtattcaaaatcattcaaatttcgaagggttgtttaataaattggatttt 37014043  T
Q  121 g 121  Q
    |    
T  37014044 g 37014044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 37014051 - 37014108
Alignment:
Q  148 aattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||  ||||||||||||    
T  37014051 aattttaacaagaaaaagtctttcataaaaagatgagatttcttgagattgtttttct 37014108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 16894078 - 16894044
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcactt 55  Q
    |||||||||||||||||||||||||||||||||||    
T  16894078 gtcttgtggtattcaatcaagactcttaatcactt 16894044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 149; Significance: 1e-78; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 19451985 - 19451784
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    ||||||||||||| |||||||||||||||||||||       ||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||    
T  19451985 gtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggatcgtttaataaatcagatttt 19451886  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  19451885 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattgtttttttcttttaagattttac 19451786  T
Q  221 ta 222  Q
    ||    
T  19451785 ta 19451784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 50192728 - 50192526
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattt 119  Q
    |||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||  || ||||||||||||||||||||||    
T  50192728 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattt 50192629  T
Q  120 tgatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagatttta 219  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  50192628 tgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattttttaggattgtttttttcttttaagatttta 50192529  T
Q  220 cta 222  Q
    |||    
T  50192528 cta 50192526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 21222170 - 21222371
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       |||||| |||||||||||||||||||||||| || ||||||||||||||| |||||||    
T  21222170 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggtattcaaaatcattcaaatttcgaaggattgtttaataaataagatttt 21222269  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    |||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  21222270 gatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttattttcttttaagattttac 21222369  T
Q  221 ta 222  Q
    ||    
T  21222370 ta 21222371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 25 - 222
Target Start/End: Complemental strand, 45760182 - 45759985
Alignment:
Q  25 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatg 124  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||    
T  45760182 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaacttcgaaggattgtttaataaatcagattttgatg 45760083  T
Q  125 gattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttacta 222  Q
    ||||||||||||||||||| ||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  45760082 gattttgtgggattttctagtgaaattttagcatgaaaaagtatttgatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 45759985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 24 - 222
Target Start/End: Complemental strand, 49198442 - 49198245
Alignment:
Q  24 ttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgat 123  Q
    |||||||||||||| |||||||||||||||||       ||  ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  49198442 ttgtggtattcaat-aagactcttaatcacttaaaaaaagttcagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 49198344  T
Q  124 ggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttacta 222  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  49198343 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaggattgtttttttcttttaagattttacta 49198245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 28824549 - 28824349
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       |||| |||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  28824549 gtcttgtggtattcaatcaagactcttaatcacttaaaaacagtcttgtggtattcaaaatcattcaaatttcgaa-gattgtttaataaatcagatttt 28824451  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    |||||||||||||||||||||||  ||||||||| || |||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||    
T  28824450 gatggattttgtgggattttctagggaaattttaacatgaaaaagtcttttataaaaacatgagatttcttaggattgtttttttcttttaagattttac 28824351  T
Q  221 ta 222  Q
    ||    
T  28824350 ta 28824349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 25 - 222
Target Start/End: Original strand, 47780738 - 47780935
Alignment:
Q  25 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatg 124  Q
    |||||||||||||||||||||||||||||||       |||||||| |||||||||||||||||| || ||| |||||||||||||||||||||||||||    
T  47780738 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaaattaaaaggattgtttaataaatcagattttgatg 47780837  T
Q  125 gattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttacta 222  Q
    ||||||||||||||||||| |||||||||| || |||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  47780838 gattttgtgggattttctagtgaaattttaacatgaaaaagtttttcatgaaaacatgagatttcttaagattgtttttttcttttaagattttacta 47780935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 47654529 - 47654327
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattt 119  Q
    |||||||||||||||||||| ||||||||||||||        ||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||    
T  47654529 gtcttgtggtattcaatcaaaactcttaatcacttaaaaaaaagtctagtggtattcaaaattattcaaatttcgaaggattgtttaataaatcagattt 47654430  T
Q  120 tgatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagatttta 219  Q
    ||||||||||||||| ||||||||  |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  47654429 tgatggattttgtggaattttctagggaaattttagcatgaaaaagtatttcatgaaaacatgagatttcttaggattgtttttttcttttaagatttta 47654330  T
Q  220 cta 222  Q
    |||    
T  47654329 cta 47654327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 21 - 221
Target Start/End: Complemental strand, 6304430 - 6304227
Alignment:
Q  21 gtcttgtggtattcaatcaaga-ctcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattt 119  Q
    |||||||||||||||| ||| | |||||||||||||       ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  6304430 gtcttgtggtattcaaccaaaaactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattt 6304331  T
Q  120 tgatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattg--tttttctcttttaagattt 217  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||| |||||  ||||| |||||||||||||    
T  6304330 tgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttatgattgtttttttttcttttaagattt 6304231  T
Q  218 tact 221  Q
    ||||    
T  6304230 tact 6304227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 21 - 207
Target Start/End: Original strand, 35279695 - 35279881
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||| ||||||||||       ||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  35279695 gtcttgtggtattcaatcaagactattaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagatttt 35279794  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctct 207  Q
    ||||||||||||||||||||||| |||||||| | || ||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  35279795 gatggattttgtgggattttctagtgaaatttcaacatgaaaaagtctttcatgaaaacatgagatttcttagaattgtttctctct 35279881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 24 - 211
Target Start/End: Original strand, 45535970 - 45536163
Alignment:
Q  24 ttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgat 123  Q
    |||||||||||||||||||||||||||| |||       ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  45535970 ttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagattttgat 45536069  T
Q  124 ggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcat------gaaaacatgagatttcttaggattgtttttctctttta 211  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||      |||||||||||||||||||||||||||||| |||||||    
T  45536070 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacgaaaacatgagatttcttaggattgtttttttctttta 45536163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 25 - 203
Target Start/End: Original strand, 49418111 - 49418289
Alignment:
Q  25 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatg 124  Q
    ||||||||||||| |||||||||||||||||       |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  49418111 tgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaaggattgtttaataaatcagattttgatg 49418210  T
Q  125 gattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    ||||||||||||||||||| ||||||||||||| |||||| ||||||||||||| |||||||||||||| ||| |||||    
T  49418211 gattttgtgggattttctattgaaattttagcatgaaaaaatctttcatgaaaatatgagatttcttagaatttttttt 49418289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 22 - 222
Target Start/End: Complemental strand, 35679304 - 35679102
Alignment:
Q  22 tcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttg 121  Q
    |||||| |||||||||||||||||||||||||||       |||  |||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  35679304 tcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcatgtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 35679205  T
Q  122 atggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtt--tttctcttttaagatttta 219  Q
    ||||||||  |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||  ||| |||||||||||||||    
T  35679204 atggatttgatgggattttctagtgaaattttagcatgaaaaagtctttcatgaagacatgagatttcttaagattgtttctttttcttttaagatttta 35679105  T
Q  220 cta 222  Q
    |||    
T  35679104 cta 35679102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 29556127 - 29556328
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||| ||||||||||||||||||||||||||        ||||||| |||||||||||||||||||||| || ||||||||||||||| |||||||    
T  29556127 gtcttgtgttattcaatcaagactcttaatcacttaaaaaaaatctagtgttattcaaaatcattcaaatttcgaaagattgtttaataaattagatttt 29556226  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaa-acatgagatttcttaggattgtttttctcttttaagatttta 219  Q
    |||||||||| |||||||||||||||||||||||||  |||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||| |    
T  29556227 gatggattttatgggattttctaatgaaattttagcttgaaaaagtcttttatgaaacacatgagatttcttaggattgttttt-tcttttaagatttaa 29556325  T
Q  220 cta 222  Q
    |||    
T  29556326 cta 29556328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 68 - 221
Target Start/End: Complemental strand, 31572327 - 31572174
Alignment:
Q  68 gtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtc 167  Q
    |||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| | |||||||||    
T  31572327 gtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttaggatgaaaaagtc 31572228  T
Q  168 tttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttact 221  Q
    |||||||||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  31572227 tttcatgaaatcatgagatttcttagaattgtttttttcttttaagattttact 31572174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 22 - 221
Target Start/End: Complemental strand, 32589129 - 32588936
Alignment:
Q  22 tcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttg 121  Q
    |||||||| ||||||||||||||||| |||||||       |||| |||||||||||||||||||||||||  || |||||||||||||||| |||||||    
T  32589129 tcttgtggcattcaatcaagactcttcatcacttaaaagaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaatcggattttg 32589030  T
Q  122 atggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttact 221  Q
    |||||||||||| ||||||||| |||||||||||||  |||||||||||||||||||||||||||||     |||||||||| |||||||||||||||||    
T  32589029 atggattttgtgagattttctagtgaaattttagcataaaaaagtctttcatgaaaacatgagattt-----gattgttttt-tcttttaagattttact 32588936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 48177639 - 48177455
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||| | | || |||||||       |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||    
T  48177639 gtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggatttt 48177540  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  48177539 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttct 48177455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 21 - 208
Target Start/End: Complemental strand, 37014817 - 37014630
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||| | |||| |||||||       |||| ||| |||||||||||||||||||||| || |||||||| ||||||   |||||    
T  37014817 gtcttgtggtattcaatcaatattcttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttctaaagattgttttataaattgaatttt 37014718  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctctt 208  Q
    |||||||||||| |||||||||| ||||||||||||| |||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  37014717 gatggattttgtcggattttctagtgaaattttagcatgaaaaagtctctcataaaaacatgagatttcttaagattgtttttctctt 37014630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 6312597 - 6312779
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  6312597 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 6312696  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  6312697 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 6312779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 21 - 203
Target Start/End: Complemental strand, 29396565 - 29396383
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  29396565 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 29396466  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  29396465 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 29396383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 25612180 - 25612362
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||| | || |||| ||       |||| ||||||||||||||||||||||||||||| |||||||||||||||  ||||||    
T  25612180 gtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggatttt 25612279  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||||||||||||| || |  ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  25612280 gatggattttgtgggattttgtagtataattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 25612362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 51701603 - 51701785
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  51701603 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 51701702  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||||||||||| ||||||||| ||  ||||||||||    
T  51701703 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattttttgagattgttttt 51701785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 63 - 221
Target Start/End: Complemental strand, 9577567 - 9577411
Alignment:
Q  63 gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaa 162  Q
    |||| ||| |||||||||||||||||||||  || |||||||||||||||  ||||||||||||||||||| ||||||||| ||||||||||| | ||||    
T  9577567 gtcttgtgatattcaaaatcattcaaatttagaaggattgtttaataaattggattttgatggattttgtgagattttctagtgaaattttagaatgaaa 9577468  T
Q  163 aagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttact 221  Q
    || |||||||||||||||||||||||||| ||||||||||  |||||||| ||||||||    
T  9577467 aaatctttcatgaaaacatgagatttcttgggattgtttt--tcttttaaaattttact 9577411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 33025536 - 33025726
Alignment:
Q  22 tcttgtggtattcaatcaaga-ctcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    ||||||||||||||||||| | |||||||||||||       |||| |||||||||||||||||||||||||  || |||||||||||| ||||||||      
T  33025536 tcttgtggtattcaatcaaaaactcttaatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaatacatcagatt-- 33025633  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
            ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||    
T  33025634 --------ttgtgggattttctaataaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattgtgttt-tcttttaagattttac 33025724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 68 - 203
Target Start/End: Complemental strand, 15835183 - 15835048
Alignment:
Q  68 gtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtc 167  Q
    |||||||||||||||||||||||| |||| |||||||||||||||  |||||||||||||||| ||||||||| || || ||||||| ||||||||||||    
T  15835183 gtggtattcaaaatcattcaaattgcaaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtc 15835084  T
Q  168 tttcatgaaaacatgagatttcttaggattgttttt 203  Q
    ||||||||||| ||||||||||||  ||||||||||    
T  15835083 tttcatgaaaagatgagatttcttgagattgttttt 15835048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 21 - 163
Target Start/End: Original strand, 730171 - 730314
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattt 119  Q
    |||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||| |   |||||||||||||||||||||    
T  730171 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcgacgaattgtttaataaatcagattt 730270  T
Q  120 tgatggattttgtgggattttctaatgaaattttagcaagaaaa 163  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||    
T  730271 tgatggattttgtgagattttctagtgaaattttagcatgaaaa 730314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 21 - 190
Target Start/End: Original strand, 46328065 - 46328234
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| || ||||||||||| |||  ||||||    
T  46328065 gtcttgaggtattcaatcaagacttttcatcacttacaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaattaattggatttt 46328164  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttct 190  Q
    |||||||||||||||||||| || || ||||||| |||||||||||||||||| |||| || ||||||||    
T  46328165 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagataagatttct 46328234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 68 - 203
Target Start/End: Complemental strand, 9322630 - 9322495
Alignment:
Q  68 gtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtc 167  Q
    |||||||||||||||||||||||||  || |||||||||||||||   ||||||||||||||| ||||||||| || || ||||||| ||||||||||||    
T  9322630 gtggtattcaaaatcattcaaatttagaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtc 9322531  T
Q  168 tttcatgaaaacatgagatttcttaggattgttttt 203  Q
    ||||||||||| ||||||||||||  ||||||||||    
T  9322530 tttcatgaaaagatgagatttcttgagattgttttt 9322495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 25 - 169
Target Start/End: Original strand, 48524346 - 48524490
Alignment:
Q  25 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatg 124  Q
    ||||||||| |||||| ||||||||||||||       |||| ||| |||||||||||||||||||||  || |||||||||||||||||| ||||||||    
T  48524346 tgtggtatttaatcaaaactcttaatcacttaaaaaaagtcttgtgatattcaaaatcattcaaattttgaaagattgtttaataaatcagtttttgatg 48524445  T
Q  125 gattttgtgggattttctaatgaaattttagcaagaaaaagtctt 169  Q
    ||||||||||||||||||| |||||||||| || |||||||||||    
T  48524446 gattttgtgggattttctagtgaaattttaacatgaaaaagtctt 48524490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 21 - 203
Target Start/End: Complemental strand, 28387570 - 28387388
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||        ||| |||||||||||| ||||||||||||| || |||||||||||||||  ||||||    
T  28387570 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaattcattcaaatttcgaaggattgtttaataaattggatttt 28387471  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    |||||||||||||||||||| || |  ||||||| ||| |||||||||||||| |||| ||||||||||||  ||||||||||    
T  28387470 gatggattttgtgggattttgtagtttaattttaacaaaaaaaagtctttcataaaaagatgagatttcttgagattgttttt 28387388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 28 - 205
Target Start/End: Complemental strand, 38536259 - 38536092
Alignment:
Q  28 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggat 127  Q
    ||||||||||||||||| || || ||||       |||| |||||||||||||| |||||||||||||| |||||||||||||||  |||||||||||||    
T  38536259 ggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggat 38536160  T
Q  128 tttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    ||||          || || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  38536159 tttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttct 38536092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 28 - 205
Target Start/End: Complemental strand, 38558477 - 38558310
Alignment:
Q  28 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggat 127  Q
    ||||||||||||||||| || || ||||       |||| |||||||||||||| |||||||||||||| |||||||||||||||  |||||||||||||    
T  38558477 ggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggat 38558378  T
Q  128 tttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    ||||          || || ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  38558377 tttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttct 38558310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 68 - 205
Target Start/End: Complemental strand, 48668905 - 48668778
Alignment:
Q  68 gtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtc 167  Q
    |||||||||||||| ||||||||||| || |||||||||||||||          |||||||||||||||| | || || ||||||| ||||||||||||    
T  48668905 gtggtattcaaaattattcaaatttcgaaagattgtttaataaat----------tggattttgtgggattctgtagtgtaattttaacaagaaaaagtc 48668816  T
Q  168 tttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    ||||||||||| ||||||||| || |||||||||||||    
T  48668815 tttcatgaaaagatgagatttgttgggattgtttttct 48668778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 29219309 - 29219483
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| | ||||||||||||||| || |||||||       |||| ||||||||||||||||||||||||   || |||||||||||||||  ||||||    
T  29219309 gtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattaagaaggattgtttaataaattggatttt 29219408  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||          || || ||||||| ||||||||||| ||||||||||| ||||||||||||  ||||||||||||    
T  29219409 gatggattttg----------tagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcttgagattgtttttct 29219483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 187
Target Start/End: Complemental strand, 5495273 - 5495117
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||| |||||||||| |||| ||||||||||            
T  5495273 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcatttaaatttcaaaggattatttaataaat-------- 5495182  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatt 187  Q
      |||||||||||||||||| || || ||||||| |||||||||||| || ||||||| ||||||||    
T  5495181 --tggattttgtgggattttgtagtgtaattttaacaagaaaaagtcctttatgaaaagatgagatt 5495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 48524805 - 48524865
Alignment:
Q  161 aaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttact 221  Q
    |||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||    
T  48524805 aaaagtctttcatgaaaacatgagatttgttaggattggttttttcttttaagattttact 48524865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 71 - 130
Target Start/End: Original strand, 955823 - 955882
Alignment:
Q  71 gtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggatttt 130  Q
    ||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||    
T  955823 gtattcaaaatcattcaaatttcgaagggttgtttaataaatcagattttgatggatttt 955882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 18798514 - 18798614
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||    
T  18798514 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 18798613  T
Q  121 g 121  Q
    |    
T  18798614 g 18798614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 121
Target Start/End: Complemental strand, 31622586 - 31622536
Alignment:
Q  71 gtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttg 121  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  31622586 gtattcaaaatcattcaaatttcaaaagattgtttaataaatcggattttg 31622536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 49230909 - 49231000
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaat 112  Q
    |||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| || |||| ||||||||||    
T  49230909 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaat 49231000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 63 - 219
Target Start/End: Original strand, 51085860 - 51086014
Alignment:
Q  63 gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaa 162  Q
    |||| |||||||||||||| ||||||||||  || |||| || |||||||  |||||||||| ||||||||| |||||||  ||||||||||  | ||      
T  51085860 gtctcgtggtattcaaaataattcaaattttgaaggattattaaataaattggattttgatgaattttgtggaattttcttgtgaaattttaatatgatt 51085959  T
Q  163 aagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagatttta 219  Q
       | ||| ||||||| |||||||||  ||||||||||||| |||||||||||||||    
T  51085960 ttttttttgatgaaaa-atgagattttctaggattgttttt-tcttttaagatttta 51086014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 22183393 - 22183457
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcatt 85  Q
    |||||||||||||||||||||| ||||||||||||       |||||||||||||||||||||||    
T  22183393 gtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 22183457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 18798607 - 18798676
Alignment:
Q  134 ggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    ||||||| || || ||||||| ||||||||||||||||||||||| |||||||||||   ||||||||||    
T  18798607 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctagagattgttttt 18798676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 95 - 190
Target Start/End: Original strand, 38320003 - 38320098
Alignment:
Q  95 aatgattgtttaataaatcagattttgatggattttgt-gggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttct 190  Q
    |||||||||||| |||||  ||||||||| |||||||| ||| |||| || |||| ||||||||  ||||||||||||||||||| |||| ||||||    
T  38320003 aatgattgtttactaaataggattttgatagattttgttgggtttttttagtgaa-ttttagcacaaaaaagtctttcatgaaaatatgatatttct 38320098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 45272609 - 45272782
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||||||        ||| |||||||||||||| ||| ||||||| || ||| |||||||||||            
T  45272609 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatctcgtggtattcaaaattatttaaatttcgaaggat-gtttaataaat-------- 45272699  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
      ||||||||||| |||||| || || ||||||| ||||||||| ||||| || |||| ||||||||| ||  ||||||||||||    
T  45272700 --tggattttgtgagattttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgagattttttgagattgtttttct 45272782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 222
Target Start/End: Original strand, 730307 - 730357
Alignment:
Q  171 catgaaaacatgagatttcttaggattgtttttctcttttaagattttacta 222  Q
    |||||||||||||||||||||||| || |||||| |||||||||||||||||    
T  730307 catgaaaacatgagatttcttaggtttttttttc-cttttaagattttacta 730357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 47784410 - 47784509
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||  ||| ||       |||| |||||||||||||| ||||||| ||| || |||||||||||||||  ||||||    
T  47784410 gtcttgtggtattcaatcaagactctttgtca-tttaaaaaagtcttgtggtattcaaaattattcaaacttctaaagattgtttaataaattggatttt 47784508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 953842 - 953876
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcactt 55  Q
    |||||||||||||| ||||||||||||||||||||    
T  953842 gtcttgtggtattcgatcaagactcttaatcactt 953876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 143; Significance: 5e-75; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 21 - 220
Target Start/End: Original strand, 102125 - 102324
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  102125 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagatttt 102224  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||| ||||||||||||| |||||||||| | ||||||||||||||    
T  102225 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaatatgagatttcttatgattgtttttttattttaagattttac 102324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 39072 - 38872
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    ||||||||||||||||| |||||||||||||||||       |||||||| |||||||||||||||||||||  || |||||||||||||||||||||||    
T  39072 gtcttgtggtattcaataaagactcttaatcacttaaaagaagtctagtgatattcaaaatcattcaaatttggaaggattgtttaataaatcagatttt 38973  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttctcttttaagattttac 220  Q
    ||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  38972 gatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttaggattgttttt-tcttttaagattttac 38874  T
Q  221 ta 222  Q
    ||    
T  38873 ta 38872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 136; Significance: 7e-71; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 100241 - 100444
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    ||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  100241 gtcttgtggtactcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaaggattgtttaataaatcaaatttt 100340  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattg--tttttctcttttaagatttt 218  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||  ||||| |||||||||||| |    
T  100341 gatggattttgtgggtttttctagtgaaattttaacaagaaaaagtctttcatgaaaacatgagatttcttaggactgtttttttttcttttaagattgt 100440  T
Q  219 acta 222  Q
    ||||    
T  100441 acta 100444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 99; Significance: 8e-49; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 24 - 203
Target Start/End: Complemental strand, 713 - 534
Alignment:
Q  24 ttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgat 123  Q
    ||||||||||||||||| ||||||||||||||        | |||||||||||||||||||||||||||  || ||||||||||||||||| ||||||||    
T  713 ttgtggtattcaatcaaaactcttaatcacttaaattttttttagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcatattttgat 614  T
Q  124 ggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    ||||||||||| |||||||| ||||||||| | | |||||||||||| | |||||||||||||||||||||||| |||||    
T  613 ggattttgtggaattttctagtgaaattttggtatgaaaaagtctttgacgaaaacatgagatttcttaggatttttttt 534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 68 - 203
Target Start/End: Original strand, 10637 - 10772
Alignment:
Q  68 gtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtc 167  Q
    ||||||||||||||||||||||||||||| |||||||||||||||   ||||||||||||||| ||||||||| || || ||||||| ||||||||||||    
T  10637 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtc 10736  T
Q  168 tttcatgaaaacatgagatttcttaggattgttttt 203  Q
    ||||||||||| ||||||||||||  ||||||||||    
T  10737 tttcatgaaaagatgagatttcttgagattgttttt 10772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 68 - 205
Target Start/End: Complemental strand, 58206 - 58069
Alignment:
Q  68 gtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtc 167  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||| || |  ||||||| ||||| ||| ||    
T  58206 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagagaaaatc 58107  T
Q  168 tttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    ||||||||||| ||||||||||||  ||||||||||||    
T  58106 tttcatgaaaagatgagatttcttgagattgtttttct 58069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 68 - 205
Target Start/End: Complemental strand, 39747 - 39610
Alignment:
Q  68 gtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtc 167  Q
    |||||||||||||||||||||| ||| || |||| ||||||||||  |||||||||||||||||||||||||| || || ||||||| ||||||||||||    
T  39747 gtggtattcaaaatcattcaaacttcgaaggattatttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 39648  T
Q  168 tttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    ||||||||||| || |||||||||  ||||||||||||    
T  39647 tttcatgaaaagataagatttcttgagattgtttttct 39610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 21 - 200
Target Start/End: Complemental strand, 37084 - 36905
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||||| ||||||||||||||||||  ||| ||       |||| | |||||||||||||||| ||||||| ||  ||||||||||||||  ||||||    
T  37084 gtcttgtgctattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaaaatcattaaaatttcgaagcattgtttaataaattggatttt 36985  T
Q  121 gatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtt 200  Q
    |||||||||||||||||||| || || ||||||| ||||||||||||||||||||||| || |||||||||  |||||||    
T  36984 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttcttgagattgtt 36905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 63 - 203
Target Start/End: Original strand, 936 - 1075
Alignment:
Q  63 gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaa 162  Q
    |||| |||||||||||||||||||||||||| ||  ||| |||||||||| ||||||||||||||||||||||||||| || || ||||||| | |||||    
T  936 gtcttgtggtattcaaaatcattcaaatttcgaagaattatttaataaat-agattttgatggattttgtgggattttgtagtgtaattttaactagaaa 1034  T
Q  163 aagtctttcatgaaaacatgagatttcttaggattgttttt 203  Q
    ||||||||||| |||| ||||||||||||  ||||||||||    
T  1035 aagtctttcattaaaatatgagatttcttgagattgttttt 1075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 28 - 205
Target Start/End: Original strand, 13919 - 14086
Alignment:
Q  28 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggat 127  Q
    ||||||||||||||||| || |||||||       |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||    
T  13919 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaagattgtttaataaattggattttgatggat 14018  T
Q  128 tttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    ||||          || ||  ||||||  |||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  14019 tttg----------tagtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttct 14086  T

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Target: scaffold0152 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 28 - 205
Target Start/End: Complemental strand, 21408 - 21241
Alignment:
Q  28 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggat 127  Q
    ||||||||||||||||| || |||||||       |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||    
T  21408 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaagattgtttaataaattggattttgatggat 21309  T
Q  128 tttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    ||||          || ||  ||||||  |||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  21308 tttg----------tagtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttct 21241  T

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Target: scaffold0152; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 28508 - 28556
Alignment:
Q  157 aagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  28508 aagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttct 28556  T

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Target: scaffold0347 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 14892 - 14974
Alignment:
Q  123 tggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttct 205  Q
    |||||||||||||||||| || || ||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  14892 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttaagattgtttttct 14974  T

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Target: scaffold0839 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 95 - 205
Target Start/End: Complemental strand, 3795 - 3685
Alignment:
Q  95 aatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttagg 194  Q
    ||||||||||||||||||  |||||||||||||||||||||||||| || || ||||||| |||||||| ||||||||| |||| || | |||| ||  |    
T  3795 aatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaggtctttcataaaaagattatattttttgag 3696  T
Q  195 attgtttttct 205  Q
    |||||||||||    
T  3695 attgtttttct 3685  T

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Target: scaffold0922 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 21 - 128
Target Start/End: Original strand, 4230 - 4337
Alignment:
Q  21 gtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagatttt 120  Q
    |||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||  || |||||||||||||||  ||||||    
T  4230 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggatttt 4329  T
Q  121 gatggatt 128  Q
    ||||||||    
T  4330 gatggatt 4337  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 155
Target Start/End: Original strand, 199905 - 199989
Alignment:
Q  71 gtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttag 155  Q
    ||||| ||||||||||||||||  || || ||||||||||||   |||||||| ||||||||| |||||| || ||||| |||||    
T  199905 gtatttaaaatcattcaaattttgaaagagtgtttaataaattgaattttgattgattttgtgagattttttagtgaaactttag 199989  T

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