View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17018_high_24 (Length: 226)

Name: NF17018_high_24
Description: NF17018
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17018_high_24
NF17018_high_24
[»] chr6 (39 HSPs)
chr6 (1-211)||(26138385-26138595)
chr6 (1-211)||(26017630-26017841)
chr6 (1-211)||(26157003-26157214)
chr6 (1-204)||(25507315-25507518)
chr6 (49-207)||(5398998-5399155)
chr6 (15-207)||(17739358-17739549)
chr6 (1-207)||(12660635-12660841)
chr6 (7-187)||(17284234-17284414)
chr6 (7-124)||(23574910-23575027)
chr6 (1-109)||(18234089-18234197)
chr6 (7-124)||(23517585-23517702)
chr6 (1-98)||(29253657-29253754)
chr6 (57-207)||(29253762-29253903)
chr6 (1-109)||(18399903-18400011)
chr6 (1-98)||(5949958-5950055)
chr6 (1-109)||(13217570-13217678)
chr6 (1-95)||(5398900-5398995)
chr6 (57-165)||(25949095-25949204)
chr6 (1-90)||(12658260-12658349)
chr6 (7-95)||(25948995-25949084)
chr6 (7-95)||(25963595-25963684)
chr6 (7-95)||(25968242-25968331)
chr6 (15-95)||(32542938-32543019)
chr6 (49-166)||(5949841-5949958)
chr6 (57-165)||(25963695-25963804)
chr6 (57-165)||(25968342-25968451)
chr6 (57-124)||(32543030-32543097)
chr6 (1-68)||(20463997-20464064)
chr6 (153-207)||(12658201-12658254)
chr6 (1-64)||(17794254-17794317)
chr6 (149-207)||(18396672-18396729)
chr6 (7-68)||(15471454-15471515)
chr6 (1-68)||(18973336-18973403)
chr6 (5-68)||(20222193-20222256)
chr6 (5-68)||(22116177-22116240)
chr6 (157-207)||(23517512-23517561)
chr6 (7-68)||(15171898-15171959)
chr6 (16-68)||(19613087-19613139)
chr6 (147-183)||(24393070-24393106)
[»] chr7 (58 HSPs)
chr7 (1-203)||(6257684-6257886)
chr7 (53-207)||(9264552-9264706)
chr7 (49-166)||(9194198-9194315)
chr7 (57-207)||(19515528-19515678)
chr7 (1-109)||(4461012-4461120)
chr7 (1-95)||(21005787-21005881)
chr7 (49-166)||(48713239-48713357)
chr7 (1-98)||(19515686-19515783)
chr7 (1-95)||(1462238-1462332)
chr7 (49-166)||(9004396-9004513)
chr7 (58-187)||(10204462-10204590)
chr7 (57-165)||(14941919-14942027)
chr7 (57-165)||(15369512-15369620)
chr7 (57-207)||(1462343-1462485)
chr7 (1-207)||(11484034-11484239)
chr7 (7-95)||(16463534-16463623)
chr7 (49-136)||(21005697-21005784)
chr7 (57-187)||(25181138-25181267)
chr7 (57-166)||(4313010-4313119)
chr7 (1-95)||(48713142-48713236)
chr7 (7-95)||(649095-649184)
chr7 (7-95)||(4307540-4307629)
chr7 (7-95)||(4312910-4312999)
chr7 (7-95)||(13434554-13434643)
chr7 (57-165)||(15707430-15707538)
chr7 (7-95)||(48355898-48355987)
chr7 (7-88)||(9192494-9192576)
chr7 (1-95)||(9194318-9194412)
chr7 (1-98)||(9004299-9004396)
chr7 (7-95)||(15707549-15707638)
chr7 (15-95)||(33609393-33609474)
chr7 (7-95)||(33612577-33612666)
chr7 (7-94)||(35964552-35964640)
chr7 (57-136)||(33609485-33609564)
chr7 (58-165)||(35964431-35964539)
chr7 (7-95)||(8880314-8880403)
chr7 (7-95)||(10204361-10204450)
chr7 (7-95)||(25181278-25181367)
chr7 (57-166)||(13434654-13434764)
chr7 (7-86)||(14942047-14942126)
chr7 (7-86)||(15369640-15369719)
chr7 (57-124)||(4307640-4307707)
chr7 (57-124)||(8880187-8880254)
chr7 (1-68)||(30064303-30064370)
chr7 (58-123)||(649018-649083)
chr7 (1-86)||(17911294-17911379)
chr7 (15-91)||(9264717-9264793)
chr7 (58-165)||(16897475-16897583)
chr7 (15-65)||(16897626-16897676)
chr7 (1-86)||(4540913-4540998)
chr7 (15-95)||(46274073-46274154)
chr7 (57-124)||(16463456-16463523)
chr7 (60-123)||(33612501-33612563)
chr7 (7-56)||(4256943-4256992)
chr7 (150-207)||(4460932-4460988)
chr7 (57-113)||(48355831-48355887)
chr7 (1-68)||(4467322-4467389)
chr7 (1-86)||(4983420-4983505)
[»] chr1 (25 HSPs)
chr1 (49-207)||(8648626-8648784)
chr1 (15-211)||(39286786-39286973)
chr1 (1-207)||(30819237-30819443)
chr1 (49-159)||(20412020-20412130)
chr1 (1-206)||(25405179-25405384)
chr1 (57-165)||(44538034-44538142)
chr1 (1-111)||(16382344-16382454)
chr1 (1-95)||(20411923-20412017)
chr1 (91-155)||(43998253-43998317)
chr1 (57-165)||(17716522-17716631)
chr1 (57-165)||(52236060-52236169)
chr1 (17-95)||(8648545-8648623)
chr1 (7-95)||(16431238-16431327)
chr1 (7-95)||(17716422-17716511)
chr1 (7-83)||(26134845-26134922)
chr1 (7-95)||(44537934-44538023)
chr1 (7-95)||(48255982-48256071)
chr1 (15-95)||(52236180-52236261)
chr1 (57-124)||(16431338-16431405)
chr1 (57-123)||(26134756-26134822)
chr1 (57-118)||(48256082-48256143)
chr1 (1-68)||(20861118-20861185)
chr1 (5-70)||(26191927-26191992)
chr1 (15-73)||(43998192-43998250)
chr1 (1-73)||(16385240-16385312)
[»] scaffold0264 (1 HSPs)
scaffold0264 (1-205)||(22572-22780)
[»] chr5 (15 HSPs)
chr5 (54-211)||(20104089-20104247)
chr5 (15-207)||(2953704-2953895)
chr5 (50-206)||(20738115-20738270)
chr5 (1-95)||(20104255-20104349)
chr5 (57-165)||(20967540-20967648)
chr5 (1-109)||(16676801-16676909)
chr5 (57-165)||(23343733-23343840)
chr5 (7-95)||(20967440-20967529)
chr5 (1-95)||(25486009-25486103)
chr5 (57-156)||(15059225-15059324)
chr5 (7-95)||(15059125-15059214)
chr5 (7-95)||(23343851-23343940)
chr5 (49-166)||(21273408-21273525)
chr5 (5-87)||(24164707-24164789)
chr5 (4-38)||(23029982-23030016)
[»] scaffold0098 (1 HSPs)
scaffold0098 (1-151)||(44502-44652)
[»] scaffold0012 (2 HSPs)
scaffold0012 (57-207)||(49661-49811)
scaffold0012 (1-95)||(49556-49650)
[»] chr3 (30 HSPs)
chr3 (1-205)||(22038600-22038795)
chr3 (20-207)||(20225428-20225615)
chr3 (75-167)||(13601521-13601613)
chr3 (1-109)||(34053879-34053987)
chr3 (57-165)||(14495006-14495114)
chr3 (1-95)||(13601409-13601503)
chr3 (1-98)||(25766018-25766115)
chr3 (7-113)||(17022964-17023070)
chr3 (49-166)||(19567208-19567325)
chr3 (57-165)||(14660974-14661082)
chr3 (7-95)||(14661093-14661182)
chr3 (1-98)||(19567325-19567421)
chr3 (9-95)||(11398564-11398651)
chr3 (7-95)||(3250385-3250474)
chr3 (7-83)||(25054705-25054782)
chr3 (58-165)||(11398662-11398770)
chr3 (7-95)||(14495125-14495214)
chr3 (57-165)||(36075967-36076075)
chr3 (57-165)||(25054807-25054916)
chr3 (7-84)||(3245372-3245450)
chr3 (57-123)||(3245284-3245350)
chr3 (14-95)||(36075874-36075956)
chr3 (1-86)||(11870135-11870220)
chr3 (1-65)||(41546107-41546171)
chr3 (1-68)||(8686208-8686275)
chr3 (1-86)||(8531625-8531710)
chr3 (77-123)||(3250329-3250375)
chr3 (147-193)||(13069632-13069677)
chr3 (157-207)||(17023106-17023155)
chr3 (7-64)||(17041442-17041499)
[»] scaffold0168 (2 HSPs)
scaffold0168 (49-207)||(9024-9181)
scaffold0168 (15-86)||(9193-9264)
[»] chr4 (31 HSPs)
chr4 (7-194)||(38651866-38652052)
chr4 (49-166)||(10730916-10731032)
chr4 (49-166)||(10944685-10944801)
chr4 (57-165)||(24125411-24125519)
chr4 (7-95)||(11902934-11903023)
chr4 (7-95)||(15409723-15409812)
chr4 (57-165)||(21275024-21275132)
chr4 (1-86)||(24125538-24125624)
chr4 (1-98)||(11889309-11889406)
chr4 (57-165)||(15409823-15409931)
chr4 (7-95)||(45234005-45234094)
chr4 (1-86)||(5513937-5514022)
chr4 (57-113)||(11902867-11902923)
chr4 (57-125)||(45233926-45233994)
chr4 (57-165)||(31593664-31593773)
chr4 (7-95)||(13622011-13622099)
chr4 (57-122)||(45244498-45244563)
chr4 (7-95)||(45244574-45244668)
chr4 (1-83)||(10730820-10730902)
chr4 (1-83)||(10944589-10944671)
chr4 (56-109)||(11889249-11889302)
chr4 (1-86)||(22181326-22181411)
chr4 (62-122)||(3772439-3772499)
chr4 (77-124)||(13622109-13622156)
chr4 (1-68)||(5675133-5675200)
chr4 (14-95)||(21274930-21275013)
chr4 (1-68)||(33331370-33331437)
chr4 (15-65)||(3772544-3772594)
chr4 (1-47)||(9488708-9488754)
chr4 (1-86)||(11922718-11922803)
chr4 (1-88)||(31593559-31593646)
[»] scaffold0713 (1 HSPs)
scaffold0713 (1-211)||(6865-7045)
[»] chr2 (29 HSPs)
chr2 (1-207)||(25337324-25337529)
chr2 (17-109)||(15583502-15583594)
chr2 (1-95)||(29568801-29568895)
chr2 (57-165)||(25481170-25481278)
chr2 (57-165)||(25488776-25488884)
chr2 (57-187)||(24507103-24507232)
chr2 (105-207)||(25858805-25858907)
chr2 (1-98)||(23140287-23140384)
chr2 (1-98)||(23552077-23552174)
chr2 (1-89)||(25858962-25859050)
chr2 (49-167)||(23140169-23140287)
chr2 (49-167)||(23551959-23552077)
chr2 (1-96)||(44997899-44997994)
chr2 (57-165)||(16134381-16134489)
chr2 (7-95)||(32441712-32441801)
chr2 (48-125)||(44997995-44998072)
chr2 (48-109)||(29568738-29568799)
chr2 (57-165)||(20281822-20281931)
chr2 (14-95)||(20281730-20281811)
chr2 (7-88)||(24507003-24507085)
chr2 (7-95)||(11390846-11390935)
chr2 (7-95)||(11407507-11407596)
chr2 (7-95)||(19927087-19927176)
chr2 (61-124)||(32441634-32441697)
chr2 (7-95)||(16134500-16134589)
chr2 (57-123)||(19927187-19927253)
chr2 (1-68)||(24321507-24321574)
chr2 (5-86)||(24371795-24371876)
chr2 (7-64)||(41653930-41653987)
[»] scaffold0092 (2 HSPs)
scaffold0092 (49-139)||(19748-19838)
scaffold0092 (1-86)||(19850-19935)
[»] chr8 (13 HSPs)
chr8 (60-149)||(9973-10062)
chr8 (57-165)||(18161792-18161899)
chr8 (55-165)||(14351827-14351937)
chr8 (1-109)||(24341769-24341877)
chr8 (7-113)||(21319158-21319264)
chr8 (49-166)||(24967046-24967163)
chr8 (7-95)||(18161692-18161781)
chr8 (1-98)||(24966949-24967046)
chr8 (15-124)||(10035-10141)
chr8 (6-87)||(24221905-24221986)
chr8 (7-98)||(14351943-14352033)
chr8 (1-68)||(18007812-18007879)
chr8 (147-207)||(26853930-26853989)
[»] scaffold0213 (2 HSPs)
scaffold0213 (1-204)||(21364-21565)
scaffold0213 (7-95)||(26667-26756)
[»] scaffold0334 (1 HSPs)
scaffold0334 (15-113)||(6936-7034)
[»] scaffold0471 (2 HSPs)
scaffold0471 (57-165)||(9999-10107)
scaffold0471 (1-86)||(10126-10212)
[»] scaffold0360 (1 HSPs)
scaffold0360 (7-88)||(39-121)
[»] scaffold0251 (2 HSPs)
scaffold0251 (57-165)||(19133-19241)
scaffold0251 (7-95)||(19252-19341)
[»] scaffold0057 (2 HSPs)
scaffold0057 (7-95)||(20851-20940)
scaffold0057 (57-124)||(20951-21018)
[»] scaffold0064 (2 HSPs)
scaffold0064 (7-85)||(48482-48561)
scaffold0064 (57-162)||(48582-48687)
[»] scaffold0058 (2 HSPs)
scaffold0058 (75-165)||(61654-61744)
scaffold0058 (8-95)||(61542-61630)
[»] scaffold0916 (2 HSPs)
scaffold0916 (7-95)||(3182-3271)
scaffold0916 (57-165)||(3282-3391)
[»] scaffold0371 (2 HSPs)
scaffold0371 (57-165)||(9280-9388)
scaffold0371 (7-95)||(9399-9488)
[»] scaffold0197 (2 HSPs)
scaffold0197 (7-95)||(9187-9276)
scaffold0197 (57-124)||(9109-9176)
[»] scaffold0031 (4 HSPs)
scaffold0031 (7-95)||(22956-23045)
scaffold0031 (7-95)||(100061-100150)
scaffold0031 (59-118)||(23058-23117)
scaffold0031 (57-125)||(100161-100229)
[»] scaffold0447 (4 HSPs)
scaffold0447 (7-65)||(6132-6190)
scaffold0447 (7-65)||(10746-10804)
scaffold0447 (57-123)||(6210-6276)
scaffold0447 (57-123)||(10824-10890)
[»] scaffold0383 (2 HSPs)
scaffold0383 (7-65)||(8741-8799)
scaffold0383 (57-123)||(8819-8885)
[»] scaffold0096 (3 HSPs)
scaffold0096 (82-165)||(38141-38224)
scaffold0096 (23-88)||(38289-38355)
scaffold0096 (57-118)||(38210-38271)
[»] scaffold1559 (1 HSPs)
scaffold1559 (1-86)||(1106-1191)
[»] scaffold0074 (1 HSPs)
scaffold0074 (1-85)||(23091-23175)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-86)||(520451-520536)
[»] scaffold0006 (1 HSPs)
scaffold0006 (7-41)||(28816-28850)


Alignment Details
Target: chr6 (Bit Score: 191; Significance: 1e-104; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 26138385 - 26138595
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  26138385 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaagatctgatacaaaaatatcttgtgcaaataat 26138484  T
Q  101 ttgaagatcttgtgcaaaaatataacaagtggcgcgtcccttttacccttttgctgcttttgcttctttgacaaagctgcctattttagtatttcagacc 200  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26138485 ttgaagatcttgtgcaaaaatataacaagtggcgggccccttttacccttttgctgcttttgcttcttcgacaaagctgcctattttagtatttcagacc 26138584  T
Q  201 tagagcctatg 211  Q
    |||||||||||    
T  26138585 tagagcctatg 26138595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 26017630 - 26017841
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaa-ggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaa 99  Q
    ||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26017630 tatttgaaagatggagtcttggagcaaaaaaaaaggagaattggagctaattcgtgccaaaaatatgaagatctgatacaaaaatatcttgtgcaaagaa 26017729  T
Q  100 tttgaagatcttgtgcaaaaatataacaagtggcgcgtcccttttacccttttgctgcttttgcttctttgacaaagctgcctattttagtatttcagac 199  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  26017730 tttgaagatcttgtgcaaaaatataacaagtggcgcaccccttttacccttttgctgcttttgtttcttcgacaaagctgcctattttagtatttcagac 26017829  T
Q  200 ctagagcctatg 211  Q
    ||||||||||||    
T  26017830 ctagagcctatg 26017841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 26157003 - 26157214
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaa-ggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaa 99  Q
    ||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26157003 tatttgaaagatggagtcttggagcaaaaaaaaaggagaattggagctaattcgtgccaaaaatatgaagatctgatacaaaaatatcttgtgcaaagaa 26157102  T
Q  100 tttgaagatcttgtgcaaaaatataacaagtggcgcgtcccttttacccttttgctgcttttgcttctttgacaaagctgcctattttagtatttcagac 199  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  26157103 tttgaagatcttgtgcaaaaatataacaagtggcgcaccccttttacccttttgctgcttttgtttcttcgacaaagctgcctattttagtatttcagac 26157202  T
Q  200 ctagagcctatg 211  Q
    ||||||||||||    
T  26157203 ctagagcctatg 26157214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 25507315 - 25507518
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaat 100  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||| || | ||| |||||||| |||||||||||||    
T  25507315 tatttgaaagatggagtcttggagaaaaagaaaggagaattggagctgattcgtgccaaaaatatgaagatatcatagaaaaatatattgtgcaaagaat 25507414  T
Q  101 ttgaagatcttgtgcaaaaatataacaagtggcgcgtcccttttacccttttgctgcttttgcttctttgacaaagctgcctattttagtatttcagacc 200  Q
    ||||||||||||||||||||||||||||||||| || | |||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||    
T  25507415 ttgaagatcttgtgcaaaaatataacaagtggcacgcctcttttacccttttgctgcatttgcttcttcgacaaagctgcctattttagtatttctgacc 25507514  T
Q  201 taga 204  Q
    ||||    
T  25507515 taga 25507518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 49 - 207
Target Start/End: Original strand, 5398998 - 5399155
Alignment:
Q  49 attcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcccttttaccc 148  Q
    |||| ||||||||||||||| |||| || ||||||||||||||||||| |||||||||||||||| |||||||||||||||||| | | ||||||| |||    
T  5398998 attcatgccaaaaatatgaagatctcatgcaaaaatatcttgtgcaaataatttgaagatcttgtacaaaaatataacaagtgg-gtgccccttttgccc 5399096  T
Q  149 ttttgctgcttttgcttctttgacaaagctgcctattttagtatttcagacctagagcc 207  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  5399097 ttttgctgcttttgcttcttggacaaagctgcctattttagtatttctgacctagagcc 5399155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 17739358 - 17739549
Alignment:
Q  15 agtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtg 114  Q
    ||||||||||||||||||||||||||| ||| |||||| ||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||     
T  17739358 agtcttggagcaaaagaaaggagaattggagttaattcatgccaaaaatatgaagatctcatacaaaaatatcttgtgcaaagaaattgaagatcttgta 17739457  T
Q  115 caaaaatataacaagtggcgcgtccc-ttttacccttttgctgcttttgcttctttgacaaagctgcctattttagtatttcagacctagagcc 207  Q
    |  ||||||| | |  |||||| ||| | || |||||||||||||||||| |||| ||| |||||||||||||||||||||| |||||||||||    
T  17739458 ccgaaatatagc-ataggcgcgccccatatttcccttttgctgcttttgcctcttcgac-aagctgcctattttagtatttctgacctagagcc 17739549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 12660841 - 12660635
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaat 100  Q
    |||||||||||| ||||||||||||||||||||||||| || ||||| ||| ||||||||||||| || |||| ||| |||||||||||| |||||||||    
T  12660841 tatttgaaagattgagtcttggagcaaaagaaaggagatttggagctgatttgtgccaaaaatataaagatcttatataaaaatatcttgggcaaagaat 12660742  T
Q  101 ttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacccttttgctgcttttgcttctttgacaaagctgcctattttagtatttcagac 199  Q
    ||||||||| |  || |||||||||  |  |||| | ||| | ||  |||||||||||||||||||||| ||| |||||||||||||||||||||| |||    
T  12660741 ttgaagatccttcgccaaaatataagcatgggcgtgccccatattgtccttttgctgcttttgcttcttcgac-aagctgcctattttagtatttctgac 12660643  T
Q  200 ctagagcc 207  Q
    ||||||||    
T  12660642 ctagagcc 12660635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 187
Target Start/End: Complemental strand, 17284414 - 17284234
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaaagaatttgaa 105  Q
    |||||| ||||||| |||||||||||| ||||||| ||||| |||||||| |||||||| ||| |||| |||||||||||||| ||||||||||||||||    
T  17284414 aaagattgagtcttagagcaaaagaaatgagaattggagctgattcgtgcaaaaaatataaaagatcttatacaaaaatatctggtgcaaagaatttgaa 17284315  T
Q  106 gatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacccttttgctgcttttgcttctttgacaaagctgcctatttt 187  Q
    |||||||| ||  ||||| | |||||||||| ||| || ||||||||||||||||||||||| | ||| ||||||||||||||    
T  17284314 gatcttgtacattaatatca-aagtggcgcgccccattatacccttttgctgcttttgcttcatagac-aagctgcctatttt 17284234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 23575027 - 23574910
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaag 106  Q
    |||||| ||||||||||||| |||||||||||||| ||||| |||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  23575027 aaagattgagtcttggagcagaagaaaggagaattggagctgattcatgccaaaaatatgaagatcttatacaaaaatatcttgtgcaaagaatttgaag 23574928  T
Q  107 atcttgtgcaaaaatata 124  Q
    ||||||| | ||||||||    
T  23574927 atcttgtaccaaaatata 23574910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 18234197 - 18234089
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaat 100  Q
    |||||||||||||||||||||||||||| |||| ||||||| ||||| |||| ||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  18234197 tatttgaaagatggagtcttggagcaaaggaaaagagaattggagctgattcatgccaaaaatacgaagatctcatacaaaaatatcttgtgcaaagaat 18234098  T
Q  101 ttgaagatc 109  Q
    |||||||||    
T  18234097 ttgaagatc 18234089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 23517702 - 23517585
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaag 106  Q
    |||||| ||||||||||||||||||||||| |||| ||||| |||| || |||||||||||| |||| |||||||||||| |||||||||||||||||||    
T  23517702 aaagattgagtcttggagcaaaagaaaggataattggagctgattcatgtcaaaaatatgaagatcttatacaaaaatattttgtgcaaagaatttgaag 23517603  T
Q  107 atcttgtgcaaaaatata 124  Q
    ||||||| | ||||||||    
T  23517602 atcttgtaccaaaatata 23517585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 29253657 - 29253754
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaaga 98  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||| ||||  ||||||||||| | |||||||||    
T  29253657 tatttgaaagatggagtcttggagcaaaagaaaggataattggagctgattcgtgccaaaaatatgaagatctcgtacaaaaatatatggtgcaaaga 29253754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 57 - 207
Target Start/End: Original strand, 29253762 - 29253903
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcccttttacccttttgctg 156  Q
    |||||||||||| |||| |||| |||||||||||||||||||||||||||||||||| ||| ||||| | |||||||||| | | |||  |||           
T  29253762 caaaaatatgaagatctcataccaaaatatcttgtgcaaagaatttgaagatcttgtacaataatatga-aagtggcgcgccacattttacct------- 29253853  T
Q  157 cttttgcttctttgacaaagctgcctattttagtatttcagacctagagcc 207  Q
     ||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  29253854 -ttttgcttcttcgacaaagctgcctattttagtatttctgacctagagcc 29253903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 18400011 - 18399903
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaat 100  Q
    |||||||||| | ||||||||||| ||||||||||| |||| ||||| ||||  |||||||||||||| |||| |||||||||||||||||||||||||     
T  18400011 tatttgaaagtttgagtcttggagaaaaagaaaggataattagagctgattccggccaaaaatatgaagatctaatacaaaaatatcttgtgcaaagaaa 18399912  T
Q  101 ttgaagatc 109  Q
    ||| |||||    
T  18399911 ttgtagatc 18399903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 5950055 - 5949958
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaaga 98  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||| |||| |||||||||||| || |||| || |||||| || |||||||||||    
T  5950055 tatttgaaagatggagtcttgaagcaaaagaaaggagaattggagcttattcatgccaaaaatataaagatctcatgcaaaaaaatattgtgcaaaga 5949958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 13217678 - 13217570
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaat 100  Q
    ||||| ||||||  |||||||||||||||||||||||| ||  |||| ||| |||||||||||||||| |||| |||||||||||||||||| ||| | |    
T  13217678 tatttcaaagatttagtcttggagcaaaagaaaggagatttacagctgatttgtgccaaaaatatgaagatcttatacaaaaatatcttgtgtaaaaagt 13217579  T
Q  101 ttgaagatc 109  Q
    |||||||||    
T  13217578 ttgaagatc 13217570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 5398900 - 5398995
Alignment:
Q  1 tatttgaaagatggagtctt-ggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaa 95  Q
    |||||||||||||||||||| ||||||||||||||||||| |   ||| |||| ||||||||||||||| |||| |||||||||||||||||||||    
T  5398900 tatttgaaagatggagtctttggagcaaaagaaaggagaaatgttgcttattcatgccaaaaatatgaagatctcatacaaaaatatcttgtgcaa 5398995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 57 - 165
Target Start/End: Original strand, 25949095 - 25949204
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcc--cttttacccttttgc 154  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| |||| |||| ||||| |||||| ||  |||| | ||||||||    
T  25949095 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgccccactttaatccttttgc 25949193  T
Q  155 tgcttttgctt 165  Q
    |||||||||||    
T  25949194 tgcttttgctt 25949204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 12658349 - 12658260
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttg 90  Q
    |||||||||||| ||||||||||||||||||||||||| || ||||| ||| ||||||||||||| || |||| ||| ||||||||||||    
T  12658349 tatttgaaagattgagtcttggagcaaaagaaaggagatttggagctgatttgtgccaaaaatataaagatcttatataaaaatatcttg 12658260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 25948995 - 25949084
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||||||||||||||||||||| ||| | ||||||||||||||||| ||| |||| |||||||||||||| ||||||    
T  25948995 aaagattgagtcttggagcaaaagaaaggagaattggagttgattcgtgccaaaaatataaaagatcttatacaaaaatatctagtgcaa 25949084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 25963595 - 25963684
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| ||||||| |||||||||||||||||||| ||||| ||||||||||||||||| ||| |||| |||||||||||||| ||||||    
T  25963595 aaagattgagtcttagagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctagtgcaa 25963684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 25968242 - 25968331
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| ||||||| |||||||||||||||||||| ||||| ||||||||||||||||| ||| |||| |||||||||||||| ||||||    
T  25968242 aaagattgagtcttagagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctagtgcaa 25968331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 32542938 - 32543019
Alignment:
Q  15 agtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| | |||||||||||| ||||||    
T  32542938 agtcttggagcaaaagaaaggagaattggagctaattcgtgccaaaaatataaaagatcttacacaaaaatatctggtgcaa 32543019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 49 - 166
Target Start/End: Complemental strand, 5949958 - 5949841
Alignment:
Q  49 attcgtgccaaaaatatgaaaatctgatacaaaa-atatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttac 146  Q
    |||| ||||||||||||||| |||| |||| ||| ||||||||||||||||||||||||||||||| ||| ||||||| |||||||||| ||| || |||    
T  5949958 attcatgccaaaaatatgaagatctcataccaaatatatcttgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgccccattatac 5949860  T
Q  147 ccttttgctgcttttgcttc 166  Q
    || ||| |||||||||||||    
T  5949859 cc-tttactgcttttgcttc 5949841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 57 - 165
Target Start/End: Original strand, 25963695 - 25963804
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcg-tcc-cttttacccttttgc 154  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||| |||| |||| |||| ||||| |||||| ||| ||||   ||||||||    
T  25963695 caaaaatatgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatattgtacaaatatat-acaagaggcgcgctccactttagtccttttgc 25963793  T
Q  155 tgcttttgctt 165  Q
    |||||||||||    
T  25963794 tgcttttgctt 25963804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 57 - 165
Target Start/End: Original strand, 25968342 - 25968451
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcg-tcc-cttttacccttttgc 154  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||| |||| |||| |||| ||||| |||||| ||| ||||   ||||||||    
T  25968342 caaaaatatgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatattgtacaaatatat-acaagaggcgcgctccactttagtccttttgc 25968440  T
Q  155 tgcttttgctt 165  Q
    |||||||||||    
T  25968441 tgcttttgctt 25968451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 57 - 124
Target Start/End: Original strand, 32543030 - 32543097
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatata 124  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| |||| |||||    
T  32543030 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatata 32543097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 20463997 - 20464064
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaa 68  Q
    ||||| |||||| ||||||||||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  20463997 tatttcaaagattgagtcttggagcaaaagaaaggagatttggagctgattcgggccaaaaatatgaa 20464064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 12658254 - 12658201
Alignment:
Q  153 gctgcttttgcttctttgacaaagctgcctattttagtatttcagacctagagcc 207  Q
    |||||||||||||||| ||||| |||||||||||||||||||| |||||||||||    
T  12658254 gctgcttttgcttcttcgacaa-gctgcctattttagtatttctgacctagagcc 12658201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 17794317 - 17794254
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaata 64  Q
    ||||||||||||  |||||||||||||||||||||||| || ||||||||| | || |||||||    
T  17794317 tatttgaaagatttagtcttggagcaaaagaaaggagatttggagctaatttgggctaaaaata 17794254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 18396729 - 18396672
Alignment:
Q  149 ttttgctgcttttgcttctttgacaaagctgcctattttagtatttcagacctagagcc 207  Q
    ||||||||||||||| |||| ||||  |||||||||||||||||||| |||||||||||    
T  18396729 ttttgctgcttttgcctcttcgacag-gctgcctattttagtatttctgacctagagcc 18396672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 15471515 - 15471454
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaa 68  Q
    |||||| |||||| |||||||||||||||||| || ||| | ||||| ||||||||||||||    
T  15471515 aaagattgagtctcggagcaaaagaaaggagatttggagttgattcgggccaaaaatatgaa 15471454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 18973336 - 18973403
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaa 68  Q
    |||| ||||||| | |||||||||||||||||||| || || ||||| ||| | ||||||||||||||    
T  18973336 tattcgaaagattgcgtcttggagcaaaagaaaggtgatttcgagctgatttgggccaaaaatatgaa 18973403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 20222193 - 20222256
Alignment:
Q  5 tgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaa 68  Q
    |||||||| |||||||||||||||||||| |||| || ||||| |||   ||||||||||||||    
T  20222193 tgaaagattgagtcttggagcaaaagaaatgagatttggagctgattgaggccaaaaatatgaa 20222256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 22116177 - 22116240
Alignment:
Q  5 tgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaa 68  Q
    |||||||| |||||||||||||||||||| |||| || ||||| |||   ||||||||||||||    
T  22116177 tgaaagattgagtcttggagcaaaagaaatgagatttggagctgattgaggccaaaaatatgaa 22116240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 23517561 - 23517512
Alignment:
Q  157 cttttgcttctttgacaaagctgcctattttagtatttcagacctagagcc 207  Q
    |||||||||||| ||||| |||||||||||||||||||| || ||||||||    
T  23517561 cttttgcttcttcgacaa-gctgcctattttagtatttctgaactagagcc 23517512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 15171898 - 15171959
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaa 68  Q
    |||||| |||||| ||||||||||||| |||| || ||| | ||||| ||||||||||||||    
T  15171898 aaagattgagtctcggagcaaaagaaatgagatttggagttgattcgggccaaaaatatgaa 15171959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 19613139 - 19613087
Alignment:
Q  16 gtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaa 68  Q
    |||||||||||||||||||  || || ||||| |||||| |||||||||||||    
T  19613139 gtcttggagcaaaagaaagctgatttggagctgattcgtaccaaaaatatgaa 19613087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 24393106 - 24393070
Alignment:
Q  147 ccttttgctgcttttgcttctttgacaaagctgccta 183  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  24393106 ccttttactgcttttgcttcttcgacaaagctgccta 24393070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 131; Significance: 4e-68; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 6257886 - 6257684
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaat 100  Q
    ||||||||||||||| ||||| ||||| |||||||||| || ||||| |||| ||  ||||||||||| |||| ||||||||||||||||||||||||||    
T  6257886 tatttgaaagatggaatcttgcagcaatagaaaggagacttggagctgattcatgtaaaaaatatgaagatctaatacaaaaatatcttgtgcaaagaat 6257787  T
Q  101 ttgaagatcttgtgcaaaaatataacaagtggcgcgtcccttttacccttttgctgcttttgcttctttgacaaagctgcctattttagtatttcagacc 200  Q
    ||||||||||||| |||||||||||||||||||||  ||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||    
T  6257786 ttgaagatcttgtacaaaaatataacaagtggcgcaccccttttgcccttttcctgcttttgcttcttcgacaaagctgcctattttagtatttctgacc 6257687  T
Q  201 tag 203  Q
    |||    
T  6257686 tag 6257684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 53 - 207
Target Start/End: Complemental strand, 9264706 - 9264552
Alignment:
Q  53 gtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcccttttaccctttt 152  Q
    |||||||||||||||| |||| |  ||||||||| |||||| ||||||||||| |||||||||||||||||||||||||| ||  |||||||||||||||    
T  9264706 gtgccaaaaatatgaagatctaaagcaaaaatatattgtgcgaagaatttgaatatcttgtgcaaaaatataacaagtggtgcaacccttttaccctttt 9264607  T
Q  153 gctgcttttgcttctttgacaaagctgcctattttagtatttcagacctagagcc 207  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  9264606 gctgcttttgcttcttcgacaaagctgcctattttagtatttctgacctagagcc 9264552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 49 - 166
Target Start/End: Complemental strand, 9194315 - 9194198
Alignment:
Q  49 attcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcccttttaccc 148  Q
    |||| ||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  9194315 attcatgccaaaaatatgaagatctcatacaaaaatatcttgtgtaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcaccccttttaccc 9194216  T
Q  149 ttttgctgcttttgcttc 166  Q
    |||||| |||| ||||||    
T  9194215 ttttgcagcttctgcttc 9194198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 207
Target Start/End: Complemental strand, 19515678 - 19515528
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcg-tcccttttacccttttgct 155  Q
    |||||||||||| |||| |||| |||||||||| |||||||||||||||||||| || ||| ||||| | |||||||||| ||| ||||||||||||| |    
T  19515678 caaaaatatgaagatctcataccaaaatatcttatgcaaagaatttgaagatctcgtacaataatatga-aagtggcgcgctccattttacccttttgtt 19515580  T
Q  156 gcttttgcttctttgacaaagctgcctattttagtatttcagacctagagcc 207  Q
    ||||||||||||| ||||||||||| |||||||||||||| | |||||||||    
T  19515579 gcttttgcttcttcgacaaagctgcatattttagtatttctggcctagagcc 19515528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 4461120 - 4461012
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaat 100  Q
    ||||| |||||| | |||||||||||||||||||||||||| ||||| || ||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  4461120 tatttcaaagattgcgtcttggagcaaaagaaaggagaattggagctgatccgtgccaaaaatatgaagatcttatacaaaaatatcttgtgcaaagaat 4461021  T
Q  101 ttgaagatc 109  Q
    |||||||||    
T  4461020 ttgaagatc 4461012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 21005881 - 21005787
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaa 95  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||| |||| |||||||||||||||||||||    
T  21005881 tatttgaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaaatatgaagatctcatacaaaaatatcttgtgcaa 21005787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 166
Target Start/End: Original strand, 48713239 - 48713357
Alignment:
Q  49 attcgtgccaaaaatatgaaaatctgatacaaaaa-tatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcccttttacc 147  Q
    |||| ||||||||||||||| |||| ||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||| |||  ||||||||||    
T  48713239 attcatgccaaaaatatgaagatctcatacaaaaaatatattgttcaaagaatttgaagatcttgtgcaaaaatataacaagtgccgcaccccttttacc 48713338  T
Q  148 cttttgctgcttttgcttc 166  Q
    |||||||||||| ||||||    
T  48713339 cttttgctgcttctgcttc 48713357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 19515783 - 19515686
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaaga 98  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||| |||| |||||||||||||| |||||||||    
T  19515783 tatttgaaagatggagtcttggagcaaaagaaaggataattggagctgattcgtgccaaaaatatgaagatctcatacaaaaatatctggtgcaaaga 19515686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 1462238 - 1462332
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaa 95  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||| |||||| |||| |||||||||||||||||||||    
T  1462238 tatttgaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaagtatgaagatctcatacaaaaatatcttgtgcaa 1462332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 49 - 166
Target Start/End: Original strand, 9004396 - 9004513
Alignment:
Q  49 attcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacc 147  Q
    |||| ||||||||||||||| |||| |||| |||||||||| ||||||||||||||||||||||| ||| ||||||| |||||||||| ||| || ||||    
T  9004396 attcatgccaaaaatatgaagatctcataccaaaatatcttatgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgccccattatacc 9004494  T
Q  148 cttttgctgcttttgcttc 166  Q
    |||||||||||||||||||    
T  9004495 cttttgctgcttttgcttc 9004513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 58 - 187
Target Start/End: Original strand, 10204462 - 10204590
Alignment:
Q  58 aaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacccttttgctg 156  Q
    ||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||| ||||||| |||||||||| ||| || ||||||| |||||    
T  10204462 aaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgccccattatacccttatgctg 10204560  T
Q  157 cttttgcttctttgacaaagctgcctatttt 187  Q
    |||||||||| | ||| ||||||||||||||    
T  10204561 cttttgcttcatagac-aagctgcctatttt 10204590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 165
Target Start/End: Complemental strand, 14942027 - 14941919
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacccttttgct 155  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||| ||||||| |||||||||| ||| || ||||||||||||    
T  14942027 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgccccattatacccttttgct 14941929  T
Q  156 gcttttgctt 165  Q
    ||||||||||    
T  14941928 gcttttgctt 14941919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 165
Target Start/End: Complemental strand, 15369620 - 15369512
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacccttttgct 155  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||| ||||||| |||||||||| ||| || ||||||||||||    
T  15369620 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgccccattatacccttttgct 15369522  T
Q  156 gcttttgctt 165  Q
    ||||||||||    
T  15369521 gcttttgctt 15369512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 57 - 207
Target Start/End: Original strand, 1462343 - 1462485
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacccttttgct 155  Q
    |||||||||||| |||  ||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||| | |||||            
T  1462343 caaaaatatgaagatcccatacaaaaaaatcttgtgcaaagaattagaagatcttgtacaaaaatataacaagtggcgcgccccatattacc-------- 1462434  T
Q  156 gcttttgcttctttgacaaagctgcctattttagtatttcagacctagagcc 207  Q
     |||||||||||| |||||||||  ||||||||||||||| |||||||||||    
T  1462435 -cttttgcttcttcgacaaagctttctattttagtatttctgacctagagcc 1462485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 11484239 - 11484034
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaat 100  Q
    |||||||||||| ||||||  ||||||||||||||||| || ||||| |||  |||||||| |||||| |||| |||||||| ||||||||||||| | |    
T  11484239 tatttgaaagattgagtctcagagcaaaagaaaggagatttggagctgatttatgccaaaagtatgaagatcttatacaaaagtatcttgtgcaaaaagt 11484140  T
Q  101 ttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacccttttgctgcttttgcttctttgacaaagctgcctattttagtatttcagac 199  Q
     |||||||| |   | |||||||||  | ||||||| ||| | || |||||||||||||||| |||||| ||| |||||||||||||||||||||  |||    
T  11484139 gtgaagatccttcaccaaaatataagca-tggcgcgccccatattgcccttttgctgctttttcttcttcgac-aagctgcctattttagtatttttgac 11484042  T
Q  200 ctagagcc 207  Q
    ||| ||||    
T  11484041 ctaaagcc 11484034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 16463623 - 16463534
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| |||||||||||||| ||||||    
T  16463623 aaagattgagtcttggagcaaaagaaaggagaattggagctaattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 16463534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 21005784 - 21005697
Alignment:
Q  49 attcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcg 136  Q
    |||| ||| |||| |||||| |||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  21005784 attcatgcaaaaattatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatctcgtacaaaaatataacaagtggcgcg 21005697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 57 - 187
Target Start/End: Complemental strand, 25181267 - 25181138
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcc-cttttacccttttgct 155  Q
    |||||||||||| |||| |||||||||||||||||| |||||||||||||||||||| ||| ||||||| |||||| ||| ||  || |||||||||| |    
T  25181267 caaaaatatgaatatctcatacaaaaatatcttgtgaaaagaatttgaagatcttgtacaataatataa-aagtggtgcgccctattatacccttttgtt 25181169  T
Q  156 gcttttgcttctttgacaaagctgcctatttt 187  Q
    ||||||||||| | ||| ||||||||||||||    
T  25181168 gcttttgcttcatagac-aagctgcctatttt 25181138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 57 - 166
Target Start/End: Original strand, 4313010 - 4313119
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacccttttgct 155  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| |||| |||| ||||| |||||  ||| || ||||||||||||    
T  4313010 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgctccccattatacccttttgct 4313108  T
Q  156 gcttttgcttc 166  Q
    |||||||||||    
T  4313109 gcttttgcttc 4313119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 48713142 - 48713236
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaa 95  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||| |||| |||||||||||| || |||| || ||||||||| ||||||||    
T  48713142 tatttgaaagatggagtcttggagcaaaagaaaagagaattagagcttattcatgccaaaaatataaagatctcatgcaaaaatatattgtgcaa 48713236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 649184 - 649095
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||| ||||  ||||||||||||| ||||||    
T  649184 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttgtacaaaaatatctggtgcaa 649095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 4307540 - 4307629
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||| ||||||||||||||||| ||||| ||||||||||||||||| ||| |||| |||||||||||||| ||||||    
T  4307540 aaagattgagtcttggaacaaaagaaaggagaattagagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 4307629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 4312910 - 4312999
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| ||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||| |||| |||||||| ||||| ||||||    
T  4312910 aaagattgagtcttggagcaaaagaaaggaaaattggagctgattcgtgccaaaaatatgaaagatctcatacaaaattatctggtgcaa 4312999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 13434554 - 13434643
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| ||||||||||||||||||||| |||||||||||  ||||||||||||||||| ||| |||| |||||||||||||| ||||||    
T  13434554 aaagattgagtcttggagcaaaagaaagaagaatttgagcggattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 13434643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 57 - 165
Target Start/End: Complemental strand, 15707538 - 15707430
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcc-cttttacccttttgct 155  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||| ||||||| ||||||| || ||  || ||| ||||||||    
T  15707538 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcacgccctattatactcttttgct 15707440  T
Q  156 gcttttgctt 165  Q
    ||||||||||    
T  15707439 gcttttgctt 15707430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 48355987 - 48355898
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| ||||||||||||||||||||||| |||| ||||| ||||||||||||||||| ||| |||| |||||||||||||| ||||||    
T  48355987 aaagattgagtcttggagcaaaagaaaggataattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 48355898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 9192494 - 9192576
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatct 88  Q
    |||||| ||||||||||||||||||||| |||||| ||||| ||||||||||||||||| ||| |||| ||||||||||||||    
T  9192494 aaagattgagtcttggagcaaaagaaagaagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatct 9192576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 9194412 - 9194318
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaa 95  Q
    |||||||||||||||||||||||||||||||||||||||||  |||| |||| |||||||||||| || || | || ||||||||| || |||||    
T  9194412 tatttgaaagatggagtcttggagcaaaagaaaggagaattgaagcttattcatgccaaaaatataaagatttcatgcaaaaatatattctgcaa 9194318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 9004299 - 9004396
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaaga 98  Q
    |||||||||||| ||||||||| ||||||||||| |||||| ||||| |||| || ||||||||| || |||| || ||||||||| |||||||||||    
T  9004299 tatttgaaagattgagtcttggggcaaaagaaagaagaattggagcttattcatggcaaaaatataaagatctcatgcaaaaatatattgtgcaaaga 9004396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 15707638 - 15707549
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||  ||| | |||||||||||| ||||||    
T  15707638 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaaggtcttacacaaaaatatctggtgcaa 15707549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 33609393 - 33609474
Alignment:
Q  15 agtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||| ||| |||| | |||||||||||| ||||||    
T  33609393 agtcttggagcaaaagaaaggagaatttgagctgattcatgccaaaaatataaaagatcttacacaaaaatatctggtgcaa 33609474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 33612666 - 33612577
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||||||||||||| ||||||| ||| | ||||||||||||||||| ||| |||| |||||||||||||| ||||||    
T  33612666 aaagattgagtcttggagcaaaagaaatgagaattggagttgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 33612577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 35964640 - 35964552
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgca 94  Q
    |||||| |||||||||||||||||||||||||| | ||||| ||| ||||||||||||| ||| |||| |||||||||||||| |||||    
T  35964640 aaagattgagtcttggagcaaaagaaaggagaactggagctgatttgtgccaaaaatataaaagatcttatacaaaaatatctggtgca 35964552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 57 - 136
Target Start/End: Original strand, 33609485 - 33609564
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcg 136  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||| ||||  ||||| ||||||    
T  33609485 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatacgacaagaggcgcg 33609564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 58 - 165
Target Start/End: Complemental strand, 35964539 - 35964431
Alignment:
Q  58 aaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcc--cttttacccttttgct 155  Q
    ||||||||||| |||| ||||||||||||| |||||||||||||| |||||||||| |||| |||| ||||| |||||| ||  ||||   |||||||||    
T  35964539 aaaaatatgaatatctcatacaaaaatatcctgtgcaaagaatttaaagatcttgtacaaatatat-acaagaggcgcgcccaactttagtccttttgct 35964441  T
Q  156 gcttttgctt 165  Q
    ||||||||||    
T  35964440 gcttttgctt 35964431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 8880403 - 8880314
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||||||||||||| ||||||| ||||| ||||||||||||||||| |||  ||| || ||||||||||| ||||||    
T  8880403 aaagattgagtcttggagcaaaagaaaagagaattggagctgattcgtgccaaaaatataaaagttcttatgcaaaaatatctggtgcaa 8880314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 10204361 - 10204450
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||||||||||||||||||||| ||| | | ||||||||||||||| ||| |||| |||||||||||| | ||||||    
T  10204361 aaagattgagtcttggagcaaaagaaaggagaattggagatgaatcgtgccaaaaatataaaagatcttatacaaaaatatatggtgcaa 10204450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 25181367 - 25181278
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||| ||||||||||||||| ||||||| ||||| ||||||||||||| ||| ||| |||| |||||||||||||| ||||||    
T  25181367 aaagattgagttttggagcaaaagaaatgagaattggagctgattcgtgccaaaactataaaagatcttatacaaaaatatctggtgcaa 25181278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 57 - 166
Target Start/End: Original strand, 13434654 - 13434764
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcc--cttttacccttttgc 154  Q
    |||||||||||| |||| ||||||||||||   |||||||||||||||||||||||| |||| |||| ||||| |||||| ||  ||||   ||||||||    
T  13434654 caaaaatatgaatatctcatacaaaaatattccgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgccccactttagtccttttgc 13434752  T
Q  155 tgcttttgcttc 166  Q
    ||||||||||||    
T  13434753 tgcttttgcttc 13434764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 14942126 - 14942047
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatat 86  Q
    |||||| |||||||||||||||||||||||||||| ||||| ||||||||| ||||||| ||| |||| ||||||||||||    
T  14942126 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgcc-aaaatataaaagatcttatacaaaaatat 14942047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 15369719 - 15369640
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatat 86  Q
    |||||| |||||||||||||||||||||||||||| ||||| ||||||||| ||||||| ||| |||| ||||||||||||    
T  15369719 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgcc-aaaatataaaagatcttatacaaaaatat 15369640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 57 - 124
Target Start/End: Original strand, 4307640 - 4307707
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatata 124  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| |||| |||||    
T  4307640 caaaaatatgaatatctcatacaaaaatattatgtgcaaagaatttgaagatcttgtacaaatatata 4307707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 57 - 124
Target Start/End: Complemental strand, 8880254 - 8880187
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatata 124  Q
    |||||||||||| |||| ||||||||||||| |||||||| |||||||||||||||| |||| |||||    
T  8880254 caaaaatatgaatatctcatacaaaaatatcctgtgcaaaaaatttgaagatcttgtacaaacatata 8880187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 30064370 - 30064303
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaa 68  Q
    ||||| |||||| ||||||||||||||||||||||||| |||||| | ||||| ||||||||||||||    
T  30064370 tattttaaagattgagtcttggagcaaaagaaaggagattttgagttgattcgggccaaaaatatgaa 30064303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 649083 - 649018
Alignment:
Q  58 aaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatat 123  Q
    |||||| |||| |||| ||||||||||||| ||||||||||||||||||||||||| |||| ||||    
T  649083 aaaaatttgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaacatat 649018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 17911294 - 17911379
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatat 86  Q
    |||||||||||| |||||||||||||||||||| |||| || ||||| ||||| |||||||||| ||| || || | |||||||||    
T  17911294 tatttgaaagattgagtcttggagcaaaagaaacgagatttggagctgattcgggccaaaaatacgaagatttggtgcaaaaatat 17911379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 9264793 - 9264717
Alignment:
Q  15 agtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgt 91  Q
    ||||||||||||||||||||||||||| || || |||| ||||||||||||||| |||| || ||||| ||| ||||    
T  9264793 agtcttggagcaaaagaaaggagaattggaacttattcatgccaaaaatatgaagatctcatgcaaaagtatattgt 9264717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 165
Target Start/End: Complemental strand, 16897583 - 16897475
Alignment:
Q  58 aaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcg-tcccttttacccttttgctg 156  Q
    ||||||||||| |||| |||||||||||| |||||||| ||||||||| ||||||| ||| ||||  ||||| |||| |  ||||||   ||||||||||    
T  16897583 aaaaatatgaatatctcatacaaaaatatattgtgcaaggaatttgaaaatcttgtacaataatacgacaagaggcgtgccccctttggtccttttgctg 16897484  T
Q  157 cttttgctt 165  Q
    |||||||||    
T  16897483 cttttgctt 16897475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 16897676 - 16897626
Alignment:
Q  15 agtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatat 65  Q
    ||||||||||||||||||||||||||| ||| | |||||||||||||||||    
T  16897676 agtcttggagcaaaagaaaggagaattggagttgattcgtgccaaaaatat 16897626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 4540913 - 4540998
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatat 86  Q
    ||||||||||||  ||||||||||||||||||| |||| || ||||| |||||  ||||||||||||| || || || ||||||||    
T  4540913 tatttgaaagatttagtcttggagcaaaagaaaagagatttggagctgattcggaccaaaaatatgaagatttggtataaaaatat 4540998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 46274073 - 46274154
Alignment:
Q  15 agtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    ||||||||||||||||||||||||||| ||| | |||  |||||||||||| ||| |||| | |||||||||||| ||||||    
T  46274073 agtcttggagcaaaagaaaggagaattggagttgatttctgccaaaaatataaaagatcttacacaaaaatatctggtgcaa 46274154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 124
Target Start/End: Complemental strand, 16463523 - 16463456
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatata 124  Q
    |||||||||||| |||| || |||||||||| | ||||||||||||||||||||| | |||| |||||    
T  16463523 caaaaatatgaatatctcatgcaaaaatatcctatgcaaagaatttgaagatcttctacaaatatata 16463456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 33612563 - 33612501
Alignment:
Q  60 aaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatat 123  Q
    ||||||||| |||| |||||||| |||| ||||||||||||||||||||||||| |||| ||||    
T  33612563 aaatatgaatatctcatacaaaa-tatcatgtgcaaagaatttgaagatcttgtacaaatatat 33612501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 4256992 - 4256943
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgc 56  Q
    |||||| ||||||||||||||||||||||||| || ||||| ||||||||    
T  4256992 aaagattgagtcttggagcaaaagaaaggagatttggagctgattcgtgc 4256943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 4460988 - 4460932
Alignment:
Q  150 tttgctgcttttgcttctttgacaaagctgcctattttagtatttcagacctagagcc 207  Q
    ||||||||||||||||||  ||||| |||||||||||||||||||| || ||||||||    
T  4460988 tttgctgcttttgcttctccgacaa-gctgcctattttagtatttctgaactagagcc 4460932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 48355887 - 48355831
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgt 113  Q
    |||||||||||| |||| ||||||||||||  | ||||||| |||||||||||||||    
T  48355887 caaaaatatgaatatctcatacaaaaatattctatgcaaaggatttgaagatcttgt 48355831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 4467389 - 4467322
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaa 68  Q
    |||||||||||| | ||||| ||||||||||||||||| || ||||| ||| | |||||| |||||||    
T  4467389 tatttgaaagattgcgtctttgagcaaaagaaaggagatttggagctgatttgggccaaatatatgaa 4467322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 4983505 - 4983420
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatat 86  Q
    |||||||||||| ||||||| ||| ||||||||||||| || ||||| ||||| |  ||||||| ||| || || | |||||||||    
T  4983505 tatttgaaagattgagtctttgagaaaaagaaaggagatttggagctgattcgggaaaaaaatacgaagatttggtgcaaaaatat 4983420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 6e-61; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 49 - 207
Target Start/End: Original strand, 8648626 - 8648784
Alignment:
Q  49 attcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcccttttaccc 148  Q
    |||| ||||||||||||||| |||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8648626 attcatgccaaaaatatgaagatctcatgcaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgacccttttaccc 8648725  T
Q  149 ttttgctgcttttgcttctttgacaaagctgcctattttagtatttcagacctagagcc 207  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||  |||||||||||    
T  8648726 ttttgctgcttttgcttcttcaacaaagctgcctattttagtatttatgacctagagcc 8648784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 15 - 211
Target Start/End: Complemental strand, 39286973 - 39286786
Alignment:
Q  15 agtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtg 114  Q
    |||||||||||||||||||||||| || ||||| |||| ||||||||||||||| |||| || |||||| || |||||||||||||||| ||||||||||    
T  39286973 agtcttggagcaaaagaaaggagatttggagcttattcatgccaaaaatatgaagatctcatgcaaaaa-atattgtgcaaagaatttggagatcttgtg 39286875  T
Q  115 caaaaatataacaagtggcgcgtcccttttacccttttgctgcttttgcttctttgacaaagctgcctattttagtatttcagacctagagcctatg 211  Q
    |||||||||||||||||||||         |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  39286874 caaaaatataacaagtggcgc--------aacccttttgctgcttttgcttcttcgacaaagctgcctattttagtatttctgacctagagcctatg 39286786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 30819443 - 30819237
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaat 100  Q
    |||||||||||| ||||||| |||||||||||| ||||||| ||||| |||| ||||||||||||||| |||| |||||||||||| ||||||||||||     
T  30819443 tatttgaaagattgagtcttagagcaaaagaaatgagaattggagctgattcatgccaaaaatatgaagatcttatacaaaaatatattgtgcaaagaaa 30819344  T
Q  101 ttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacccttttgctgcttttgcttctttgacaaagctgccta-ttttagtatttcaga 198  Q
    ||||||||| |   | ||||||||| |  ||||||| ||| ||||  |||||||||||||||||||||  ||| ||||| |||| |||||||||||| ||    
T  30819343 ttgaagatccttcaccaaaatataa-agatggcgcgcccctttttgtccttttgctgcttttgcttctccgac-aagctacctatttttagtatttctga 30819246  T
Q  199 cctagagcc 207  Q
    |||||||||    
T  30819245 cctagagcc 30819237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 159
Target Start/End: Original strand, 20412020 - 20412130
Alignment:
Q  49 attcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcccttttaccc 148  Q
    |||| ||| ||||||||||| |||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||  ||||||||||    
T  20412020 attcatgcaaaaaatatgaagatctcatacaaaaatatctggtgcaaagaaattgaagatcttgtgcaaaaatataacaagtggtgcgctccttttaccc 20412119  T
Q  149 ttttgctgctt 159  Q
    |||||||||||    
T  20412120 ttttgctgctt 20412130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 25405384 - 25405179
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaat 100  Q
    ||||| |||||| ||||||||||||||||||||||||| || ||||| ||| |||||||||||||||| |||| ||||| |||||||||||||||| | |    
T  25405384 tatttcaaagattgagtcttggagcaaaagaaaggagatttggagctgatttgtgccaaaaatatgaagatcttatacagaaatatcttgtgcaaaaagt 25405285  T
Q  101 ttgaagatc-ttgtgcaaaaatataacaagtggcgcgtccc-ttttacccttttgctgcttttgcttctttgacaaagctgcctattttagtatttcaga 198  Q
    | ||||||| ||   |||||||| ||  | ||||||| ||| | ||  ||||||||| |||||||||||| ||  |||||| |||||||||||| || ||    
T  25405284 tagaagatctttcaccaaaaatagaagga-tggcgcgccccatattgtccttttgctacttttgcttcttcga-taagctgtctattttagtatgtctga 25405187  T
Q  199 cctagagc 206  Q
    ||||||||    
T  25405186 cctagagc 25405179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 57 - 165
Target Start/End: Original strand, 44538034 - 44538142
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacccttttgct 155  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||| ||||||| |||||||||| ||| || ||| ||||||||    
T  44538034 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgccccattatactcttttgct 44538132  T
Q  156 gcttttgctt 165  Q
    ||||||||||    
T  44538133 gcttttgctt 44538142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 16382454 - 16382344
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaat 100  Q
    ||||| |||||| |||||||||||||||||||| |||| || ||||| ||| |||||||||||||||| ||||  | ||||||||||||||||||| | |    
T  16382454 tatttcaaagattgagtcttggagcaaaagaaatgagatttggagctgatttgtgccaaaaatatgaagatcttgtgcaaaaatatcttgtgcaaaaagt 16382355  T
Q  101 ttgaagatctt 111  Q
    |||||||||||    
T  16382354 ttgaagatctt 16382344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 20411923 - 20412017
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaa 95  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||| |||| |||||||||||| || |||| || ||||||||| ||||||||    
T  20411923 tatttgaaagatggagtcttggagcaaaagaaacgagaattggagcttattcatgccaaaaatataaagatctcatgcaaaaatatattgtgcaa 20412017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 43998253 - 43998317
Alignment:
Q  91 tgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcccttttacccttttgct 155  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  43998253 tgcaaagaatttgaagatcttgtgcaaaaatatatcaagtggcgcgacccttttacccttttgct 43998317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 57 - 165
Target Start/End: Original strand, 17716522 - 17716631
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcc--cttttacccttttgc 154  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| |||| |||| ||||| |||||| ||  ||||   ||||||||    
T  17716522 caaaaatatgaatatctcatacaaaaatatcctgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgccccactttagtccttttgc 17716620  T
Q  155 tgcttttgctt 165  Q
    |||||||||||    
T  17716621 tgcttttgctt 17716631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 57 - 165
Target Start/End: Complemental strand, 52236169 - 52236060
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcc--cttttacccttttgc 154  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| |||| |||| ||||| |||||| ||  ||||   ||||||||    
T  52236169 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgcccaactttagtccttttgc 52236071  T
Q  155 tgcttttgctt 165  Q
    |||||||||||    
T  52236070 tgcttttgctt 52236060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 8648545 - 8648623
Alignment:
Q  17 tcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaa 95  Q
    ||||||||||||||||||||||||| ||||| |||| ||||||||||||||| |||| || ||||||||| ||||||||    
T  8648545 tcttggagcaaaagaaaggagaattggagcttattcatgccaaaaatatgaagatctcatgcaaaaatatattgtgcaa 8648623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 16431238 - 16431327
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| | |||||||||||||||||||||||||| ||||| ||||||||||||||||| ||| |||| |||||||||||| | ||||||    
T  16431238 aaagattgggtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatatggtgcaa 16431327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 17716422 - 17716511
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||||||||||||||| ||||| ||||| ||||||||||||||||| ||| |||| |||||||||||| | ||||||    
T  17716422 aaagattgagtcttggagcaaaagaaaggcgaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatatggtgcaa 17716511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 26134922 - 26134845
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaa 83  Q
    |||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||| |||| |||||||||    
T  26134922 aaagattgagtcttagagcaaaagaaaggagaatttgagctgattcgtgccaaaaatataaaagatcttatacaaaaa 26134845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 44537934 - 44538023
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||||||||||||||||||||| ||| | | ||||||||||||||| ||| |||| |||||||||||||| ||||||    
T  44537934 aaagattgagtcttggagcaaaagaaaggagaattggagttgaatcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 44538023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 48255982 - 48256071
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||||||||||||||||||||| ||| | |||||||| |||||||| ||| |||| |||||||||||||| ||||||    
T  48255982 aaagattgagtcttggagcaaaagaaaggagaattagagttgattcgtgcaaaaaatataaaagatcttatacaaaaatatctggtgcaa 48256071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 52236261 - 52236180
Alignment:
Q  15 agtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||| |||| |||||||||||| | ||||||    
T  52236261 agtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatttggtgcaa 52236180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 57 - 124
Target Start/End: Original strand, 16431338 - 16431405
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatata 124  Q
    |||||||||||| || | ||||||||||||| ||||||||||||||||||||||||| |||| |||||    
T  16431338 caaaaatatgaatatttcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatata 16431405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 123
Target Start/End: Complemental strand, 26134822 - 26134756
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatat 123  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| |||| ||||    
T  26134822 caaaaatatgaatatctcatacaaaaatattctgtgcaaagaatttgaagatcttgtacaaatatat 26134756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 48256082 - 48256143
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaa 118  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||| ||||| ||||    
T  48256082 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagaacttgtacaaa 48256143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 20861185 - 20861118
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaa 68  Q
    ||||| |||||| |||||||||||||||||||| || | |||||||| ||||| ||||||||||||||    
T  20861185 tattttaaagattgagtcttggagcaaaagaaatgatattttgagctgattcgggccaaaaatatgaa 20861118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 26191927 - 26191992
Alignment:
Q  5 tgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaa 70  Q
    |||||||| ||||||||||||||||||||| ||| || ||| | ||||| ||||||||||||||||    
T  26191927 tgaaagattgagtcttggagcaaaagaaagaagatttggaggtgattcgggccaaaaatatgaaaa 26191992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 43998192 - 43998250
Alignment:
Q  15 agtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatct 73  Q
    ||||||||||||||||||||||||||| ||||| || | |||||||| |||||| ||||    
T  43998192 agtcttggagcaaaagaaaggagaattagagcttatccatgccaaaagtatgaagatct 43998250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 16385312 - 16385240
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatct 73  Q
    ||||| |||||| |||||||||||||||||||| |||  || ||||| ||| | |||||||||||||| ||||    
T  16385312 tattttaaagattgagtcttggagcaaaagaaatgaggtttggagctgatttgggccaaaaatatgaagatct 16385240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 22780 - 22572
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatct----gatacaaaaatatcttgtgcaaa 96  Q
    |||||||||||||||||||| ||||||||||||||||| || ||||| |||| || |||||||||||| ||||     ||||||||||||||||||||||    
T  22780 tatttgaaagatggagtctttgagcaaaagaaaggagatttggagctgattcatgtcaaaaatatgaagatctcatatatacaaaaatatcttgtgcaaa 22681  T
Q  97 gaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcccttttacccttttgctgcttttgcttctttgacaaagctgcctattttagtatttca 196  Q
    |||||||||||| |||| ||||||||||||||||| |||| || |||| ||||||||||| |||||| |||| ||||||||| ||||||||||||||||     
T  22680 gaatttgaagatattgtacaaaaatataacaagtgacgcgcccattttgcccttttgctgtttttgcctcttcgacaaagctacctattttagtatttct 22581  T
Q  197 gacctagag 205  Q
    |||||||||    
T  22580 gacctagag 22572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 1e-58; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 54 - 211
Target Start/End: Complemental strand, 20104247 - 20104089
Alignment:
Q  54 tgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttaccctttt 152  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||| | |||||||| |    
T  20104247 tgccaaaaatatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttatacaaaaatataacaagtggcgcgccccatattacccttct 20104148  T
Q  153 gctgcttttgcttctttgacaaagctgcctattttagtatttcagacctagagcctatg 211  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  20104147 gctgcttttgcttatttgacaaagctgcctattttagtatttctgacctagagcctatg 20104089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 2953895 - 2953704
Alignment:
Q  15 agtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtg 114  Q
    ||||||||| ||||||||||||||||| ||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||     
T  2953895 agtcttggaacaaaagaaaggagaattggagctgattcgtgccaaaaatatgaagatctcatacaaaaatatcttgtgcaaagaaattgaagatcttgta 2953796  T
Q  115 caaaaatataacaagtggcgcgtccc-ttttacccttttgctgcttttgcttctttgacaaagctgcctattttagtatttcagacctagagcc 207  Q
    | | |||||| | |  |||||  ||| |||| ||||||||||||||||||||||  ||| |||||||||||||||||||||| |||||||||||    
T  2953795 ccagaatatagc-ataggcgcaccccattttgcccttttgctgcttttgcttctccgac-aagctgcctattttagtatttctgacctagagcc 2953704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 50 - 206
Target Start/End: Original strand, 20738115 - 20738270
Alignment:
Q  50 ttcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataaca-agtggcgcgtcccttttaccc 148  Q
    |||||||||||||||| || |||| ||||||||||||||||||||||||| ||||||||||||| ||| |||||| || ||  || |  ||||||| |||    
T  20738115 ttcgtgccaaaaatataaagatctcatacaaaaatatcttgtgcaaagaaattgaagatcttgtacaagaatatagcatagacgcac-ccccttttgccc 20738213  T
Q  149 ttttgctgcttttgcttctttgacaaagctgcctattttagtatttcagacctagagc 206  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||    
T  20738214 ttttgctgcttttgcttcttcgac-aagctgcctattttagtatttctgacctagagc 20738270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 20104349 - 20104255
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaa 95  Q
    |||||||||||||||||||||||||||||||||||||||||  |||| |||  ||||||||||||||| |||| |||||||||||||||||||||    
T  20104349 tatttgaaagatggagtcttggagcaaaagaaaggagaattatagcttattgatgccaaaaatatgaagatctcatacaaaaatatcttgtgcaa 20104255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 57 - 165
Target Start/End: Original strand, 20967540 - 20967648
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacccttttgct 155  Q
    |||||||||||| || | ||||||||||||||| ||||||||||||||||||||||| |||||| |||| |||||||||| ||| || ||||||||||||    
T  20967540 caaaaatatgaatatgttatacaaaaatatcttatgcaaagaatttgaagatcttgtacaaaaacataa-aagtggcgcgccccattatacccttttgct 20967638  T
Q  156 gcttttgctt 165  Q
    ||||||||||    
T  20967639 gcttttgctt 20967648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 16676801 - 16676909
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaat 100  Q
    |||||||||||| |||||||||||||||||||| | || ||  |||| ||| |||||||||||||||| |||| |||||||||||||||||||||| | |    
T  16676801 tatttgaaagattgagtcttggagcaaaagaaaagggatttgaagctgatttgtgccaaaaatatgaagatcttatacaaaaatatcttgtgcaaaaagt 16676900  T
Q  101 ttgaagatc 109  Q
    |||||||||    
T  16676901 ttgaagatc 16676909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 57 - 165
Target Start/End: Complemental strand, 23343840 - 23343733
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcccttttacccttttgctg 156  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||| ||||||| ||||||| || || || |||||||||||||    
T  23343840 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcacgcccattatacccttttgctg 23343742  T
Q  157 cttttgctt 165  Q
     ||||||||    
T  23343741 tttttgctt 23343733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 20967440 - 20967529
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||| |||| |||||||||||||| ||||||    
T  20967440 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 20967529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 25486103 - 25486009
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaa 95  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||| |||| | |||||||||| || |||| || ||||||||| ||||||||    
T  25486103 tatttgaaagatggagtctttgagcaaaagaaaggagaattggagcttattcataccaaaaatataaagatctcatgcaaaaatatattgtgcaa 25486009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 57 - 156
Target Start/End: Original strand, 15059225 - 15059324
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacccttttgct 155  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||| ||||||| ||||||| || ||| || ||||||||||||    
T  15059225 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcacgccccattatacccttttgct 15059323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 15059125 - 15059214
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||| ||| |||| | |||||||||||| ||||||    
T  15059125 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgtcaaaaatataaaagatcttacacaaaaatatctggtgcaa 15059214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 23343940 - 23343851
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||||||||||||||||||||| ||||| || |||||||||||||| ||| || | | |||||||||||||||||||    
T  23343940 aaagattgagtcttggagcaaaagaaaggagaattggagctgatgcgtgccaaaaatataaaagattttacacaaaaatatcttgtgcaa 23343851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 49 - 166
Target Start/End: Original strand, 21273408 - 21273525
Alignment:
Q  49 attcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacc 147  Q
    |||| ||||||||||||||| |||| |||| || |||| ||||| |||||||||||| ||||||  ||| ||||||| |||||||||| ||| || ||||    
T  21273408 attcatgccaaaaatatgaagatctcataccaatatatgttgtgtaaagaatttgaatatcttgcacaataatataa-aagtggcgcgccccattatacc 21273506  T
Q  148 cttttgctgcttttgcttc 166  Q
     ||||||||||||||||||    
T  21273507 tttttgctgcttttgcttc 21273525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 24164707 - 24164789
Alignment:
Q  5 tgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatc 87  Q
    |||||||| ||||||||||||||||||||||||| || ||| | |||   |||||||||||||| ||||  | ||||||||||    
T  24164707 tgaaagattgagtcttggagcaaaagaaaggagatttggagatgattgaagccaaaaatatgaagatcttgtgcaaaaatatc 24164789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 23030016 - 23029982
Alignment:
Q  4 ttgaaagatggagtcttggagcaaaagaaaggaga 38  Q
    ||||||||| |||||||||||||||||||||||||    
T  23030016 ttgaaagattgagtcttggagcaaaagaaaggaga 23029982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 44652 - 44502
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||| ||| || |||| || ||||||||| |||||||||||||    
T  44652 tatttgaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaattataaagatctcatgcaaaaatatattgtgcaaagaat 44553  T
Q  101 ttgaagatcttgtgcaaaaatataacaagtggcgcgtcccttttacccttt 151  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  44552 ttgaagatcttgtgcaaaaatataacaagtggcgcgccccttttacccttt 44502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 57 - 207
Target Start/End: Original strand, 49661 - 49811
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcccttttacccttttgctg 156  Q
    |||||||||||| |||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||| |||||||||||    
T  49661 caaaaatatgaagatctcatacgaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccctttttgcccttttgctg 49760  T
Q  157 cttttgcttctttgacaaagctgcctattttagtatttcagacctagagcc 207  Q
    |||||||||||| |||| ||||||||||||||||||||| |||||||||||    
T  49761 cttttgcttcttcgacatagctgcctattttagtatttctgacctagagcc 49811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 49556 - 49650
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaa 95  Q
    |||||||||||||||||||||||||||||||||  |||||| ||||| |||| ||||||||||||||| |||| || ||||||||| ||||||||    
T  49556 tatttgaaagatggagtcttggagcaaaagaaataagaattggagcttattcatgccaaaaatatgaagatctcatgcaaaaatatattgtgcaa 49650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 3e-53; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 22038600 - 22038795
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||  ||| ||||||||||||| |||||| ||||||||||||||||||||||||||    
T  22038600 tatttgaaagatggagtcttggagcaaaagaaaggagaattggagcttgttcatgccaaaaatatg-aaatctcatacaaaaatatcttgtgcaaagaat 22038698  T
Q  101 ttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacccttttgctgcttttgcttctttgacaaagctgcctattttagtatttcagac 199  Q
    ||| ||||||||| ||||||||||||||||| |||| ||| | |||||         |||||||||||| |||||||||||||||||| ||||||| |||    
T  22038699 ttggagatcttgtacaaaaatataacaagtgacgcgccccatattacc---------cttttgcttcttcgacaaagctgcctatttttgtatttctgac 22038789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 207
Target Start/End: Complemental strand, 20225615 - 20225428
Alignment:
Q  20 tggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaa 119  Q
    |||||||||||||||||||||| ||||| |||| ||||||||||||||| |||| | |||||||||||||||  |||||||| ||||||||||| |   |    
T  20225615 tggagcaaaagaaaggagaattggagctgattcttgccaaaaatatgaagatctcacacaaaaatatcttgtataaagaattagaagatcttgtaccgga 20225516  T
Q  120 atataacaagtggcgcgtccc-ttttacccttttgctgcttttgcttctttgacaaagctgcctattttagtatttcagacctagagcc 207  Q
    || || ||   |||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  20225515 atgtagcata-ggcgcgcccccttttacccttttgctgcttttgcttcttcgacaaagctgcctattttagtatttctgacctagagcc 20225428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 13601521 - 13601613
Alignment:
Q  75 atacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcccttttacccttttgctgcttttgcttct 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||    
T  13601521 atacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgccccttttacccttttgttgcttctgcttct 13601613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 34053987 - 34053879
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaat 100  Q
    |||||||||||||||||||||||| ||| |||| ||||||| ||||| |||| ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  34053987 tatttgaaagatggagtcttggagaaaaggaaatgagaattggagctgattcatgccaaaaatatgaagatctcatacaaaaatatcttgtgcaaagaat 34053888  T
Q  101 ttgaagatc 109  Q
    |||||||||    
T  34053887 ttgaagatc 34053879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 165
Target Start/End: Complemental strand, 14495114 - 14495006
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacccttttgct 155  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||| ||| || ||||||||||||    
T  14495114 caaaaatatgaatatctcatacaaaaatatcctgtgcaaagaatttgaagatcttgtacaaaaatataa-aagtggcgcgccccattatacccttttgct 14495016  T
Q  156 gcttttgctt 165  Q
    ||||||||||    
T  14495015 gcttttgctt 14495006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 13601409 - 13601503
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaa 95  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||| || |||| || ||||||||| ||||||||    
T  13601409 tatttgaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaaatataaagatcttatgcaaaaatatattgtgcaa 13601503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 25766115 - 25766018
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaaga 98  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||| |||| |||||||||||| || |||| || ||||||||| |||||||||||    
T  25766115 tatttgaaagatggagtcttgaagcaaaagaaaggagaattggagcttattcatgccaaaaatataaagatctcatgcaaaaatatattgtgcaaaga 25766018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 17022964 - 17023070
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaag 106  Q
    |||||| |||| || |||||||||||| ||||||| ||||| ||| |||||||||||| ||| |||| | ||||||||||||||||||||||||| ||||    
T  17022964 aaagattgagtattagagcaaaagaaatgagaattggagctgatttgtgccaaaaataagaagatctcacacaaaaatatcttgtgcaaagaattagaag 17023063  T
Q  107 atcttgt 113  Q
    |||||||    
T  17023064 atcttgt 17023070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 49 - 166
Target Start/End: Complemental strand, 19567325 - 19567208
Alignment:
Q  49 attcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtc-ccttttacc 147  Q
    |||| |||||||||||| || ||||||||| |||||||||||||||||||||| ||||||||||| ||| ||||||| |||||| ||| | | || ||||    
T  19567325 attcatgccaaaaatattaagatctgataccaaaatatcttgtgcaaagaattcgaagatcttgtacaataatataa-aagtggtgcgcctcattatacc 19567227  T
Q  148 cttttgctgcttttgcttc 166  Q
    |||||||||||||||||||    
T  19567226 cttttgctgcttttgcttc 19567208  T

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Target: chr3; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 57 - 165
Target Start/End: Complemental strand, 14661082 - 14660974
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacccttttgct 155  Q
    |||||||||||| |||| ||||||||||||| ||| | ||||||||||||||||||| ||| ||||||| |||||||||| ||| || ||||||||||||    
T  14661082 caaaaatatgaatatctcatacaaaaatatcatgtacgaagaatttgaagatcttgtacaataatataa-aagtggcgcgccccattatacccttttgct 14660984  T
Q  156 gcttttgctt 165  Q
    ||||||||||    
T  14660983 gcttttgctt 14660974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 14661182 - 14661093
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||| |||| |||||||||||||| ||||||    
T  14661182 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 14661093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 19567421 - 19567325
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaaga 98  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||| || || |||| || ||||||||| |||||||||||    
T  19567421 tatttgaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaaa-ataaagatctcatgcaaaaatatattgtgcaaaga 19567325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 11398564 - 11398651
Alignment:
Q  9 agatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||| || ||||||    
T  11398564 agattgagtcttggagcaaaagaaaggagaattggagctaattcgtgccaaaaatataaaagatcttatacaaaaatacctggtgcaa 11398651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 3250474 - 3250385
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||| |||| |||||||||||| | ||||||    
T  3250474 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatatggtgcaa 3250385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 25054705 - 25054782
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaa 83  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| |||||||||    
T  25054705 aaagattgagtcttggagcaaaagaaaggagaattggagctaattcgtgccaaaaatataaaagatcttatacaaaaa 25054782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 165
Target Start/End: Original strand, 11398662 - 11398770
Alignment:
Q  58 aaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcc--cttttacccttttgct 155  Q
    ||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| |||| |||| ||||| |||||| ||  ||||   |||||||||    
T  11398662 aaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgccccactttagtccttttgct 11398760  T
Q  156 gcttttgctt 165  Q
    ||||||||||    
T  11398761 gcttttgctt 11398770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 14495214 - 14495125
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||||||||||||| ||||||| ||||| |||| |||||||||||| ||| |||| |||||||||||||| ||||||    
T  14495214 aaagattgagtcttggagcaaaagaaacgagaattggagctgattcatgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 14495125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 57 - 165
Target Start/End: Original strand, 36075967 - 36076075
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcc-cttttacccttttgct 155  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| |||| |||| ||||| |||||| || ||||   |||||||||    
T  36075967 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgcccactttagtccttttgct 36076065  T
Q  156 gcttttgctt 165  Q
    | ||||||||    
T  36076066 gattttgctt 36076075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 57 - 165
Target Start/End: Original strand, 25054807 - 25054916
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcc--cttttacccttttgc 154  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| |||| |||| ||||| |||||| ||  ||||   ||||||||    
T  25054807 caaaaatatgaatatctcatacaaaaatattatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgccccactttagtccttttgc 25054905  T
Q  155 tgcttttgctt 165  Q
    |||||||||||    
T  25054906 tgcttttgctt 25054916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 3245450 - 3245372
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaat 84  Q
    |||||| ||||||||||| |||||||||||||||| ||||| ||||||||||||||||| ||| |||| ||||||||||    
T  3245450 aaagattgagtcttggagtaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaat 3245372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 123
Target Start/End: Complemental strand, 3245350 - 3245284
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatat 123  Q
    |||||||||||| |||| ||||||||||||| | ||||||||||||||||||||||| |||| ||||    
T  3245350 caaaaatatgaatatctcatacaaaaatatcatatgcaaagaatttgaagatcttgtacaaatatat 3245284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 36075874 - 36075956
Alignment:
Q  14 gagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    ||||||||||  |||||||||||||||| ||||| |||||| |||||||||| ||| |||| |||||||||||||| ||||||    
T  36075874 gagtcttggaaaaaaagaaaggagaattggagctgattcgtaccaaaaatataaaagatcttatacaaaaatatctagtgcaa 36075956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 11870220 - 11870135
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatat 86  Q
    ||||| |||||| |||||||||||||||||||||||||  | ||||| ||||| |||||||||| ||| || || | |||||||||    
T  11870220 tatttcaaagattgagtcttggagcaaaagaaaggagatctggagctgattcgggccaaaaatacgaagatttggtgcaaaaatat 11870135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 41546171 - 41546107
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatat 65  Q
    ||||||||||||  |||||||||||||||||||||||| |||||||| ||||   ||||||||||    
T  41546171 tatttgaaagatttagtcttggagcaaaagaaaggagattttgagctgattcagaccaaaaatat 41546107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 8686275 - 8686208
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaa 68  Q
    |||||||||||| | ||| |||||||||||||||| || || ||||| ||||| ||||||||||||||    
T  8686275 tatttgaaagattgtgtcctggagcaaaagaaaggtgatttggagctgattcgggccaaaaatatgaa 8686208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 8531625 - 8531710
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatat 86  Q
    |||||||||||| |||| |||||||||||||||||||| || |||   ||| | |||||||||| ||| || || |||||||||||    
T  8531625 tatttgaaagattgagttttggagcaaaagaaaggagatttggaggcgatttgggccaaaaatacgaagatttggtacaaaaatat 8531710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 3250375 - 3250329
Alignment:
Q  77 acaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatat 123  Q
    ||||||||||| | ||||||||||||||||||||||| |||| ||||    
T  3250375 acaaaaatatcatatgcaaagaatttgaagatcttgtacaaatatat 3250329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 13069632 - 13069677
Alignment:
Q  147 ccttttgctgcttttgcttctttgacaaagctgcctattttagtatt 193  Q
    |||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  13069632 ccttttgctgcttttgcttcttcgac-aagcttcctattttagtatt 13069677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 17023106 - 17023155
Alignment:
Q  157 cttttgcttctttgacaaagctgcctattttagtatttcagacctagagcc 207  Q
    ||||||||| || ||||| |||||||||||||||||||| |||||||||||    
T  17023106 cttttgcttattcgacaa-gctgcctattttagtatttctgacctagagcc 17023155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 17041442 - 17041499
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaata 64  Q
    |||||| |||||||||||||||||||||  || || ||||| ||||||||| ||||||    
T  17041442 aaagattgagtcttggagcaaaagaaagaggatttggagctgattcgtgcctaaaata 17041499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 49 - 207
Target Start/End: Complemental strand, 9181 - 9024
Alignment:
Q  49 attcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcccttttaccc 148  Q
    |||| ||||||||||||||| |||| || ||||||| | |||||||||||||||||| |||||||  ||||||||||||||||||||| |||||||||||    
T  9181 attcatgccaaaaatatgaagatctcatgcaaaaatctattgtgcaaagaatttgaacatcttgtcaaaaaatataacaagtggcgcgacccttttaccc 9082  T
Q  149 ttttgctgcttttgcttctttgacaaagctgcctattttagtatttcagacctagagcc 207  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  9081 ttttgctg-ttttgcttcttcgacaaagctgcctattttagtatttctgacctagagcc 9024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 9264 - 9193
Alignment:
Q  15 agtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatat 86  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||| ||||||||| |||| || |||||||||    
T  9264 agtcttggagcaaaagaaaggagaattggagcttattcatgccataaatatgaagatctcatgcaaaaatat 9193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 2e-45; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 7 - 194
Target Start/End: Original strand, 38651866 - 38652052
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaag 106  Q
    |||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||||| || |||| ||||||||||||||||||||||||||| ||||    
T  38651866 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcatgccaaaaatattaagatcttatacaaaaatatcttgtgcaaagaattggaag 38651965  T
Q  107 atcttgtgcaaaaatataacaagtggcgcgtccc-ttttacccttttgctgcttttgcttctttgacaaagctgcctattttagtattt 194  Q
    ||||||||| |||||||| | |  |||||| ||| | || |||||||| |||||||||||||| ||| ||||||| |||||||||||||    
T  38651966 atcttgtgccaaaatatagc-ataggcgcgccccatattgcccttttgttgcttttgcttcttcgac-aagctgcttattttagtattt 38652052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 49 - 166
Target Start/End: Original strand, 10730916 - 10731032
Alignment:
Q  49 attcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcccttttaccc 148  Q
    |||| ||||||||||||||| |||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| | |||||||| ||    
T  10730916 attcatgccaaaaatatgaagatctcatacaaaaatatcttatgcaaagaatttaaagatcttgtgcaaaaatataacaagtggcgtgcccctttta-cc 10731014  T
Q  149 ttttgctgcttttgcttc 166  Q
    ||||||||||| ||||||    
T  10731015 ttttgctgcttctgcttc 10731032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 49 - 166
Target Start/End: Original strand, 10944685 - 10944801
Alignment:
Q  49 attcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcccttttaccc 148  Q
    |||| ||||||||||||||| |||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| | |||||||| ||    
T  10944685 attcatgccaaaaatatgaagatctcatacaaaaatatcttatgcaaagaatttaaagatcttgtgcaaaaatataacaagtggcgtgcccctttta-cc 10944783  T
Q  149 ttttgctgcttttgcttc 166  Q
    ||||||||||| ||||||    
T  10944784 ttttgctgcttctgcttc 10944801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 165
Target Start/End: Complemental strand, 24125519 - 24125411
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacccttttgct 155  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||| ||||||| |||||||||| ||| || ||||||||||||    
T  24125519 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgccccgttatacccttttgct 24125421  T
Q  156 gcttttgctt 165  Q
    ||||||||||    
T  24125420 gcttttgctt 24125411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 11903023 - 11902934
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||| |||| |||||||||||||| ||||||    
T  11903023 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 11902934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 15409723 - 15409812
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| | |||||||||||| ||||||    
T  15409723 aaagattgagtcttggagcaaaagaaaggagaatttgagctgattcgtgccaaaaatataaaagatcttacacaaaaatatctggtgcaa 15409812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 57 - 165
Target Start/End: Original strand, 21275024 - 21275132
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacccttttgct 155  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||| ||||||| |||||||  | ||| || ||||||||||||    
T  21275024 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgttcaataatataa-aagtggcatgccccattatacccttttgct 21275122  T
Q  156 gcttttgctt 165  Q
    ||||||||||    
T  21275123 gcttttgctt 21275132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 24125624 - 24125538
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatat 86  Q
    ||||| |||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||| |||| ||||||||||||    
T  24125624 tattttaaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatat 24125538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 11889406 - 11889309
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaaga 98  Q
    |||||||  ||| |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||| |||| ||| |||||||| || ||||||||    
T  11889406 tatttgatggattgagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaaatatgaagatctcatataaaaatatattatgcaaaga 11889309  T

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Target: chr4; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 57 - 165
Target Start/End: Original strand, 15409823 - 15409931
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacccttttgct 155  Q
    |||||||||||| |||| ||||||||||||| |||||||||| |||||||||||||| ||| ||||||| ||||||| || ||| || |||||||||| |    
T  15409823 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagagtttgaagatcttgtacaataatataa-aagtggcacgccccattatacccttttgtt 15409921  T
Q  156 gcttttgctt 165  Q
    ||||||||||    
T  15409922 gcttttgctt 15409931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 45234094 - 45234005
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||||||||| ||||||||||| ||||| ||||||||||||||||| ||| |||| |||||||||||||| ||||||    
T  45234094 aaagattgagtcttggagcaaaaaaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 45234005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 5514022 - 5513937
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatat 86  Q
    |||||||||||| |||||||||||||||||||| |||| || ||||| ||||| |||||||||| |||||| |||| |||||||||    
T  5514022 tatttgaaagattgagtcttggagcaaaagaaatgagatttagagctgattcgggccaaaaataagaaaatttgatgcaaaaatat 5513937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 11902923 - 11902867
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgt 113  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  11902923 caaaaatatgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgt 11902867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 45233994 - 45233926
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataa 125  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||| |||||||    
T  45233994 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa 45233926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 57 - 165
Target Start/End: Original strand, 31593664 - 31593773
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcc--cttttacccttttgc 154  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| |||| |||| ||||| |||||| ||  ||||   ||||||||    
T  31593664 caaaaatatgaatatctcatacaaaaatattctgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgccccactttagtccttttgc 31593762  T
Q  155 tgcttttgctt 165  Q
    |||||||||||    
T  31593763 tgcttttgctt 31593773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 13622011 - 13622099
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||||||||||||||||||||| ||||| ||||||||| ||||| | ||| |||| |||||||||||||| ||||||    
T  13622011 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgcc-aaaatgtaaaagatcttatacaaaaatatctggtgcaa 13622099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 122
Target Start/End: Complemental strand, 45244563 - 45244498
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaata 122  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  45244563 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataata 45244498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 45244668 - 45244574
Alignment:
Q  7 aaagatggagtcttggagcaaaa-----gaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| ||||||||||||||||     |||||||||||| ||||| ||||||||||||||||| ||| |||| |||||||||||||| ||||||    
T  45244668 aaagattgagtcttggagcaaaagaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 45244574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 10730820 - 10730902
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaa 83  Q
    |||| |||||||||||| |||| |||||||||||||||||| ||||| |||| | |||||||||| || |||| || ||||||    
T  10730820 tattcgaaagatggagtgttggtgcaaaagaaaggagaattggagcttattcatcccaaaaatataaagatctcatgcaaaaa 10730902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 10944589 - 10944671
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaa 83  Q
    |||| |||||||||||| |||| |||||||||||||||||| ||||| |||| | |||||||||| || |||| || ||||||    
T  10944589 tattcgaaagatggagtgttggtgcaaaagaaaggagaattggagcttattcatcccaaaaatataaagatctcatgcaaaaa 10944671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 11889302 - 11889249
Alignment:
Q  56 ccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatc 109  Q
    ||||||||||||| |||| |||| |||||||||| |||||||||||||||||||    
T  11889302 ccaaaaatatgaagatctcataccaaaatatcttctgcaaagaatttgaagatc 11889249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 22181411 - 22181326
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatat 86  Q
    ||||| |||||| ||||||||||||||||||||||||| |  ||||| ||||| |||||||||| ||| || || | |||||||||    
T  22181411 tatttcaaagattgagtcttggagcaaaagaaaggagattcggagctgattcgggccaaaaatacgaagatttggtgcaaaaatat 22181326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 3772499 - 3772439
Alignment:
Q  62 atatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaata 122  Q
    ||||||| |||| ||||||||||||  ||||||||||||||||||||||||| ||| ||||    
T  3772499 atatgaatatctcatacaaaaatataatgtgcaaagaatttgaagatcttgtacaataata 3772439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 124
Target Start/End: Original strand, 13622109 - 13622156
Alignment:
Q  77 acaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatata 124  Q
    ||||||||||| ||||||||||||||||||||||||| |||| |||||    
T  13622109 acaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatata 13622156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 5675133 - 5675200
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttg-agctaattcgtgccaaaaatatgaa 68  Q
    |||||||||||| |||||||||||||||||||| || |||||| |||| ||||| | ||||||||||||    
T  5675133 tatttgaaagattgagtcttggagcaaaagaaatga-aatttgaagctgattcgcggcaaaaatatgaa 5675200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 21274930 - 21275013
Alignment:
Q  14 gagtcttggagcaaaagaaaggagaattt-gagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||||||||||||||||||| |  ||| ||||| ||||||||||||||||| ||| |||| ||||| |||||| | ||||||    
T  21274930 gagtcttggagcaaaagaaagggggttttggagctgattcgtgccaaaaatataaaagatcttatacagaaatatttggtgcaa 21275013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 33331437 - 33331370
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaa 68  Q
    ||||| ||||||  ||||||||||||||||||| |||| || ||||| ||| | ||||||||||||||    
T  33331437 tattttaaagatcaagtcttggagcaaaagaaatgagatttggagctgattagggccaaaaatatgaa 33331370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 3772594 - 3772544
Alignment:
Q  15 agtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatat 65  Q
    ||||||||||||||||||| ||||||| ||||| ||| ||| |||||||||    
T  3772594 agtcttggagcaaaagaaaagagaattggagctgatttgtgtcaaaaatat 3772544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 9488754 - 9488708
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagct 47  Q
    ||||| |||||| ||||||||||||||||||||||||| || |||||    
T  9488754 tatttcaaagattgagtcttggagcaaaagaaaggagatttggagct 9488708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 11922803 - 11922718
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatat 86  Q
    ||||| |||||| | || |||||||||||||||||||| || ||| | ||||  |||||||||||||| || || | |||||||||    
T  11922803 tatttcaaagattgtgtattggagcaaaagaaaggagatttggagtttattcaggccaaaaatatgaagatttggtgcaaaaatat 11922718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 31593559 - 31593646
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatct 88  Q
    ||||| |||||| |||| ||| ||||||||||| ||||||| ||||| |||||||| |||||||  ||| |||| | ||||||||||||    
T  31593559 tattttaaagattgagtattg-agcaaaagaaatgagaattggagctgattcgtgcaaaaaataaaaaagatcttaaacaaaaatatct 31593646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0713 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 7045 - 6865
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaat 100  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||         
T  7045 tatttgaaagatggagtcttagagcaaaagaaaggagaattggagctaattcgtgcaaaaaatatgaagatctgatacaaaaatatcttgtgcaa----- 6951  T
Q  101 ttgaagatcttgtgcaaaaatataacaagtggcgcgtcccttttacccttttgctgcttttgcttctttgacaaagctgcctattttagtatttcagacc 200  Q
                     ||||||||||||||||||| |||||        |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6950 -----------------aaatataacaagtggcgcgcccctt--------ttgctgcttttgcttcttcgacaaagctgcctattttagtatttcagacc 6876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 1e-37; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 25337529 - 25337324
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaat 100  Q
    ||||| |||||| ||||||||||||||||||| ||||| || ||||| ||| |||||||||||||||| |||| |||||||||||| ||||||| | | |    
T  25337529 tatttaaaagattgagtcttggagcaaaagaatggagatttggagctgatttgtgccaaaaatatgaagatcttatacaaaaatatattgtgcataaagt 25337430  T
Q  101 ttgaagatcttgtgcaaaaatataacaagtggcgcgtccctt-ttacccttttgctgcttttgcttctttgacaaagctgcctattttagtatttcagac 199  Q
    ||||||||| |   | |||||||||  | ||||| | ||||| ||  |||||||||||||||||||||| ||| |||||||||||||||||||||| |||    
T  25337429 ttgaagatccttcaccaaaatataagca-tggcgtgccccttattgtccttttgctgcttttgcttcttcgac-aagctgcctattttagtatttctgac 25337332  T
Q  200 ctagagcc 207  Q
    ||||||||    
T  25337331 ctagagcc 25337324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 15583502 - 15583594
Alignment:
Q  17 tcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatc 109  Q
    ||||||||||||| ||||||||||| ||||| |||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||    
T  15583502 tcttggagcaaaataaaggagaattggagctgattcgtgccaaaaatatgaagatcttatacaaaaatatcttgcgcaaagaatttgaagatc 15583594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 29568895 - 29568801
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaa 95  Q
    |||||||||||||||||||| ||||||| |||||||||||| |||||||||| ||||||||||||||| |||| ||| |||||||||||||||||    
T  29568895 tatttgaaagatggagtcttcgagcaaaggaaaggagaattggagctaattcatgccaaaaatatgaagatctcatataaaaatatcttgtgcaa 29568801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 165
Target Start/End: Original strand, 25481170 - 25481278
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtc-ccttttacccttttgct 155  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||| | | || ||||||||||||    
T  25481170 caaaaatatgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataa-aagtggtgcgcctcattatacccttttgct 25481268  T
Q  156 gcttttgctt 165  Q
    ||||||||||    
T  25481269 gcttttgctt 25481278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 165
Target Start/End: Original strand, 25488776 - 25488884
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtc-ccttttacccttttgct 155  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||| | | || ||||||||||||    
T  25488776 caaaaatatgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataa-aagtggtgcgcctcattatacccttttgct 25488874  T
Q  156 gcttttgctt 165  Q
    ||||||||||    
T  25488875 gcttttgctt 25488884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 57 - 187
Target Start/End: Original strand, 24507103 - 24507232
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacccttttgct 155  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||| ||| || |||| |||| ||    
T  24507103 caaaaatatgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgccccattatacctttttcct 24507201  T
Q  156 gcttttgcttctttgacaaagctgcctatttt 187  Q
    |||||| |||| | ||| ||||||||||||||    
T  24507202 gctttttcttcatagac-aagctgcctatttt 24507232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 105 - 207
Target Start/End: Complemental strand, 25858907 - 25858805
Alignment:
Q  105 agatcttgtgcaaaaatataacaagtggcgcgtcccttttacccttttgctgcttttgcttctttgacaaagctgcctattttagtatttcagacctaga 204  Q
    ||||||||| |||||||||||||||||||||| |||| ||  |||||||||| ||||| ||||  |||||||||||||||||||||||||| ||||||||    
T  25858907 agatcttgtacaaaaatataacaagtggcgcgcccctattgtccttttgctgattttgattctacgacaaagctgcctattttagtatttctgacctaga 25858808  T
Q  205 gcc 207  Q
    |||    
T  25858807 gcc 25858805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 23140384 - 23140287
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaaga 98  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||| |||| |||||||||||| || |||| || ||||||||| |||||||||||    
T  23140384 tatttgaaagatggagtcttggagcaaaagaaatgagaattggagcttattcatgccaaaaatataaagatctcatgcaaaaatatattgtgcaaaga 23140287  T

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Target: chr2; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 23552174 - 23552077
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaaga 98  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||| |||| |||||||||||| || |||| || ||||||||| |||||||||||    
T  23552174 tatttgaaagatggagtcttggagcaaaagaaatgagaattggagcttattcatgccaaaaatataaagatctcatgcaaaaatatattgtgcaaaga 23552077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 25859050 - 25858962
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatctt 89  Q
    |||||||||||||||||||||||||||||||||||||||||  |||| |||| || |||||||||||| |||| |||||||| ||||||    
T  25859050 tatttgaaagatggagtcttggagcaaaagaaaggagaattgaagctgattcatgtcaaaaatatgaagatctcatacaaaactatctt 25858962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 23140287 - 23140169
Alignment:
Q  49 attcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacc 147  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||| ||||||||||| ||| |||| || |||||||||| ||| || ||||    
T  23140287 attcatgccaaaaatatgaagatctcataacaaaatatcttgtgcaaagaattcgaagatcttgtacaataata-aaaaagtggcgcgccccattatacc 23140189  T
Q  148 cttttgctgcttttgcttct 167  Q
    |||||||||||| |||||||    
T  23140188 cttttgctgcttctgcttct 23140169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 23552077 - 23551959
Alignment:
Q  49 attcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacc 147  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||| ||||||||||| ||| |||| || |||||||||| ||| || ||||    
T  23552077 attcatgccaaaaatatgaagatctcataacaaaatatcttgtgcaaagaattcgaagatcttgtacaataata-aaaaagtggcgcgccccattatacc 23551979  T
Q  148 cttttgctgcttttgcttct 167  Q
    |||||||||||| |||||||    
T  23551978 cttttgctgcttctgcttct 23551959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 44997899 - 44997994
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaa 96  Q
    |||||||||||||||||||| ||||||||||||||||||||  |||| |||| |||||||||||| || |||| || ||||||||| |||||||||    
T  44997899 tatttgaaagatggagtctttgagcaaaagaaaggagaattgaagcttattcatgccaaaaatataaagatctcatgcaaaaatatattgtgcaaa 44997994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 57 - 165
Target Start/End: Complemental strand, 16134489 - 16134381
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacccttttgct 155  Q
    ||||||||| || |||| ||||||||||||| |||||||||||||||||||| |||| ||| ||||||| ||||||| || ||| || ||||||||||||    
T  16134489 caaaaatataaatatctcatacaaaaatatcatgtgcaaagaatttgaagatattgtacaataatataa-aagtggcacgccccattatacccttttgct 16134391  T
Q  156 gcttttgctt 165  Q
    ||||||||||    
T  16134390 gcttttgctt 16134381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 32441801 - 32441712
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||| |||| ||| |||||||||| ||||||    
T  32441801 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatagaaaaatatctggtgcaa 32441712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 44997995 - 44998072
Alignment:
Q  48 aattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataa 125  Q
    ||||| ||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||| ||| |||||||    
T  44997995 aattcatgccaaaaatatgaagatctcataccaaaatatcttgtgcaaagaatttgaagatcttgtacaataatataa 44998072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 29568799 - 29568738
Alignment:
Q  48 aattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatc 109  Q
    ||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  29568799 aattcatgccaaaaatatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatc 29568738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 57 - 165
Target Start/End: Original strand, 20281822 - 20281931
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcc--cttttacccttttgc 154  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||| | |||| |||| ||||| || ||||||  ||||   ||||||||    
T  20281822 caaaaatatgaatatctcatacaaaaatatcctgtgcaaagaatttgaagatcttttacaaatatat-acaagaggtgcgtcccactttagtccttttgc 20281920  T
Q  155 tgcttttgctt 165  Q
    |||||||||||    
T  20281921 tgcttttgctt 20281931  T

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Target: chr2; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 20281730 - 20281811
Alignment:
Q  14 gagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| ||||||| ||| |||| |||||||||||||| ||||||    
T  20281730 gagtcttggagcaaaagaaaggagaattggagctgattcgtgcc-aaaatataaaacatcttatacaaaaatatctggtgcaa 20281811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 24507003 - 24507085
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatct 88  Q
    |||||| ||||||| |||||||||||| ||||||| ||||| ||||||||||||||||| ||| |||| ||||||||||||||    
T  24507003 aaagattgagtctttgagcaaaagaaaagagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatct 24507085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 11390846 - 11390935
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||||||||||||| ||||||| ||||| |||||| |||||||||| ||| |||| |||||||||||| | ||||||    
T  11390846 aaagattgagtcttggagcaaaagaaaagagaattggagctgattcgtaccaaaaatataaaagatcttatacaaaaatatttggtgcaa 11390935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 11407507 - 11407596
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||||||||||||| ||||||| ||||| |||||| |||||||||| ||| |||| |||||||||||| | ||||||    
T  11407507 aaagattgagtcttggagcaaaagaaaagagaattggagctgattcgtaccaaaaatataaaagatcttatacaaaaatatttggtgcaa 11407596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 19927087 - 19927176
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| ||||||||||||||||||||   ||||||||| | ||||||||||||||||| ||| |||| |||||||||||||| ||||||    
T  19927087 aaagattgagtcttggagcaaaagaaatttgaatttgagttgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 19927176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 32441697 - 32441634
Alignment:
Q  61 aatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatata 124  Q
    ||||| || |||| ||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  32441697 aatataaatatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaatatata 32441634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 16134589 - 16134500
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| ||||||||||||||||||| | | |||| ||||| ||||||||||||||||| ||| |||| |||||||||||| | ||||||    
T  16134589 aaagattgagtcttggagcaaaagaaggaaaaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatatggtgcaa 16134500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 123
Target Start/End: Original strand, 19927187 - 19927253
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatat 123  Q
    ||||||||| || |||| ||||||||||||| || |||||||||||||||||||||| |||| ||||    
T  19927187 caaaaatatcaatatctcatacaaaaatatcctgcgcaaagaatttgaagatcttgtacaaatatat 19927253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 24321507 - 24321574
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaa 68  Q
    |||||||||| | |||||||| |||||||||||||||| || ||||| |||||  ||| |||||||||    
T  24321507 tatttgaaaggttgagtcttgcagcaaaagaaaggagatttggagctgattcggcccacaaatatgaa 24321574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 24371876 - 24371795
Alignment:
Q  5 tgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatat 86  Q
    |||||||| ||||||||||| ||||||||||||| || ||||| |||   ||||||| |||||| ||||  | |||||||||    
T  24371876 tgaaagattgagtcttggagaaaaagaaaggagatttggagctgattgaggccaaaactatgaagatcttgtgcaaaaatat 24371795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 41653987 - 41653930
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaata 64  Q
    |||||| |||||||||||||||||||||  || || ||||| ||||||||| ||||||    
T  41653987 aaagattgagtcttggagcaaaagaaagaggatttggagctgattcgtgcctaaaata 41653930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 79; Significance: 4e-37; HSPs: 2)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 49 - 139
Target Start/End: Complemental strand, 19838 - 19748
Alignment:
Q  49 attcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcc 139  Q
    |||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19838 attcgtgccaaaaatatgaagatctcatacaaaaatttcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcc 19748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 19935 - 19850
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatat 86  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||| |||| |||||||||||| || |||| || |||||||||    
T  19935 tatttgaaagatggagtcttggagaaaaagaaaggagaattggagcttattcatgccaaaaatataaagatctcatgcaaaaatat 19850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 60 - 149
Target Start/End: Complemental strand, 10062 - 9973
Alignment:
Q  60 aaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcccttttaccct 149  Q
    ||||||||| |||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10062 aaatatgaagatctcatgcaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgacccttttaccct 9973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 57 - 165
Target Start/End: Original strand, 18161792 - 18161899
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcccttttacccttttgctg 156  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||| || || |||| ||||||||    
T  18161792 caaaaatatgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccattataccattttgctg 18161890  T
Q  157 cttttgctt 165  Q
    |||||||||    
T  18161891 cttttgctt 18161899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 55 - 165
Target Start/End: Complemental strand, 14351937 - 14351827
Alignment:
Q  55 gccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacccttttg 153  Q
    |||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||| ||| || ||||||||||    
T  14351937 gccaaaaatatgaagatctcataccaaaatatcttgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgccccattatacccttttg 14351839  T
Q  154 ctgcttttgctt 165  Q
    ||||||||||||    
T  14351838 ctgcttttgctt 14351827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 24341769 - 24341877
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaat 100  Q
    |||||||||||| ||||||| |||||||||||| |||| || ||||| ||| |||||||||||||||| |||| |||||||||||||||||||||| | |    
T  24341769 tatttgaaagattgagtcttagagcaaaagaaatgagatttggagctgatttgtgccaaaaatatgaagatcttatacaaaaatatcttgtgcaaaaagt 24341868  T
Q  101 ttgaagatc 109  Q
    |||||||||    
T  24341869 ttgaagatc 24341877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 21319158 - 21319264
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaag 106  Q
    |||||| || ||||||||||||| |||||||||||  |||| |||||||||||||||||||| |||| ||||||||||||||||||||||||| || |||    
T  21319158 aaagattgaatcttggagcaaaaaaaaggagaattgaagctgattcgtgccaaaaatatgaagatctcatacaaaaatatcttgtgcaaagaaattaaag 21319257  T
Q  107 atcttgt 113  Q
    || ||||    
T  21319258 atgttgt 21319264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 166
Target Start/End: Original strand, 24967046 - 24967163
Alignment:
Q  49 attcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacc 147  Q
    |||| ||| ||||||||||| || | |||| |||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||| ||| || ||||    
T  24967046 attcatgcaaaaaatatgaagatatcatactaaaatatcttgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgccccattatacc 24967144  T
Q  148 cttttgctgcttttgcttc 166  Q
    |||||||||||||||||||    
T  24967145 cttttgctgcttttgcttc 24967163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 18161692 - 18161781
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| |||| |||||||||||||| ||||||    
T  18161692 aaagattgagtcttggagcaaaagaaaggagaatttgagctgattcgtgccaacaatataaaagatcttatacaaaaatatctggtgcaa 18161781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 24966949 - 24967046
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaaga 98  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||| | | |||||||| || |||| || ||||||||| || ||||||||    
T  24966949 tatttgaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatacaaaaaatataaagatctcatgcaaaaatatattttgcaaaga 24967046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 10141 - 10035
Alignment:
Q  15 agtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtg 114  Q
    |||||||||||||||||||||| |||| ||| | |||| ||||||||||||||| |||| || ||||||||| |||||||   ||| |||||||||  ||    
T  10141 agtcttggagcaaaagaaaggaaaattggagtttattcatgccaaaaatatgaagatctcatgcaaaaatatattgtgca---aatatgaagatctcatg 10045  T
Q  115 caaaaatata 124  Q
    ||||||||||    
T  10044 caaaaatata 10035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 24221986 - 24221905
Alignment:
Q  6 gaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatc 87  Q
    ||||||| ||||||||||||||||||||||||| || |||||||||   |||||||||||||| ||||  | ||||||||||    
T  24221986 gaaagatcgagtcttggagcaaaagaaaggagatttagagctaattgaggccaaaaatatgaagatcttgtgcaaaaatatc 24221905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 14352033 - 14351943
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaaga 98  Q
    |||||| ||||||||||||||||||| |||||||| ||||| |||| |||||||| ||| || |||| || |||||| || |||||||||||    
T  14352033 aaagattgagtcttggagcaaaagaagggagaattggagcttattcatgccaaaattataaagatcttatgcaaaaa-atattgtgcaaaga 14351943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 18007812 - 18007879
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaa 68  Q
    ||||| |||||| |||||||||||||||||||||| || |  ||||| ||||||||||||||||||||    
T  18007812 tatttcaaagattgagtcttggagcaaaagaaaggtgattcggagctgattcgtgccaaaaatatgaa 18007879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 26853930 - 26853989
Alignment:
Q  147 ccttttgctgcttttgcttctttgacaaagctgcctattttagtatttcagacctagagcc 207  Q
    |||||||| ||||||||||||| ||||| ||||| |||||||||||||| |||||||||||    
T  26853930 ccttttgcagcttttgcttcttcgacaa-gctgcgtattttagtatttctgacctagagcc 26853989  T

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Target: scaffold0213 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 21364 - 21565
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaat 100  Q
    ||||| |||||| |||||||||||||||||||||||| ||| ||| | ||| |||||||||||||||| |||  |||||||||||||||||||| | | |    
T  21364 tatttaaaagattgagtcttggagcaaaagaaaggag-attggagttgatttgtgccaaaaatatgaagatcatatacaaaaatatcttgtgcacaaagt 21462  T
Q  101 ttgaagatcttgtgcaaaaatataacaagtggcgcgtccctt-ttacccttttgctgcttttgcttctttgacaaagctgcctattttagtatttcagac 199  Q
    ||| ||||| |  || |||||||||  | ||||||| ||||| ||  |||||||  ||||||||||||| ||| |||||||||||||||||||||| |||    
T  21463 ttgtagatccttcgccaaaatataagca-tggcgcgccccttattgtccttttgtggcttttgcttcttggac-aagctgcctattttagtatttctgac 21560  T
Q  200 ctaga 204  Q
    |||||    
T  21561 ctaga 21565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 26667 - 26756
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||||||||||||||||||||| ||| | ||||||||||||||||| ||| |||| |||||||||||||| ||||||    
T  26667 aaagattgagtcttggagcaaaagaaaggagaattggagttgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 26756  T

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Target: scaffold0334 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 6936 - 7034
Alignment:
Q  15 agtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgt 113  Q
    ||||||||||||||||||||| ||||| ||||| |||| ||||||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||    
T  6936 agtcttggagcaaaagaaaggggaattggagctgattcatgccaaaaatatgaagatctcatataaaaatatcttgtgcaaagaattagaagatcttgt 7034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 165
Target Start/End: Complemental strand, 10107 - 9999
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacccttttgct 155  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||| ||||||| |||||||||| ||| || ||||||||||||    
T  10107 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgccccgttatacccttttgct 10009  T
Q  156 gcttttgctt 165  Q
    ||||||||||    
T  10008 gcttttgctt 9999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 10212 - 10126
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatat 86  Q
    ||||| |||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||| |||| ||||||||||||    
T  10212 tattttaaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatat 10126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 121 - 39
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatct 88  Q
    |||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||||||    
T  121 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatatgaaagatcttatacaaaaatatct 39  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 58; Significance: 1e-24; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 57 - 165
Target Start/End: Complemental strand, 19241 - 19133
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacccttttgct 155  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||  ||| ||||||| |||||||||| ||| || |||| |||||||    
T  19241 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgaacaataatataa-aagtggcgcgccccattatacctttttgct 19143  T
Q  156 gcttttgctt 165  Q
    ||||||||||    
T  19142 gcttttgctt 19133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 19341 - 19252
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| ||||||||||||||| |||| ||||||| ||||| ||||||||||||||||| ||| |||| |||||||||||||| ||||||    
T  19341 aaagattgagtcttggagcaaatgaaaagagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 19252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 58; Significance: 1e-24; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 20851 - 20940
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||| ||| |||| |||||||||||||| ||||||    
T  20851 aaagattgagtcttggagcaaaagaaaggagaatcggagctaattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 20940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 57 - 124
Target Start/End: Original strand, 20951 - 21018
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatata 124  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| |||| |||||    
T  20951 caaaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatata 21018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 48482 - 48561
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaata 85  Q
    |||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||| |||||||||||    
T  48482 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatatgaaagatcttatacaaaaata 48561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 57 - 162
Target Start/End: Original strand, 48582 - 48687
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtc-ccttttacccttttgct 155  Q
    |||||||||||| |||  ||||||||||||| ||||||||||||||||||||||||| ||| ||||||| |||||||||| | | || ||||||||||||    
T  48582 caaaaatatgaatatcccatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcctcattatacccttttgct 48680  T
Q  156 gcttttg 162  Q
    |||||||    
T  48681 gcttttg 48687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 75 - 165
Target Start/End: Original strand, 61654 - 61744
Alignment:
Q  75 atacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacccttttgctgcttttgctt 165  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||| || ||| || ||||||||||||||||||||||    
T  61654 atacaaaaatatcctgtgcaaagaatttgaagatcttgtacaaaaatataa-aagtggcacgccccattatacccttttgctgcttttgctt 61744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 61542 - 61630
Alignment:
Q  8 aagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    ||||| |||||||||||||||||||||||||||| ||||| |||||| |||||||||| ||| |||| |||||||||||||| ||||||    
T  61542 aagattgagtcttggagcaaaagaaaggagaattggagctgattcgttccaaaaatataaaagatcttatacaaaaatatctggtgcaa 61630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0916 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0916
Description:

Target: scaffold0916; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 3182 - 3271
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||| |||  |||||||||||||| ||||||    
T  3182 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcatatacaaaaatatctggtgcaa 3271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0916; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 57 - 165
Target Start/End: Original strand, 3282 - 3391
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtcc--cttttacccttttgc 154  Q
    |||||||||||| || | | ||||||||||| ||||||||||||||||||||||||| |||| |||| ||||| |||||| ||  ||||   ||||||||    
T  3282 caaaaatatgaatatatcacacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgccccactttagtccttttgc 3380  T
Q  155 tgcttttgctt 165  Q
    |||||||||||    
T  3381 tgcttttgctt 3391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 57 - 165
Target Start/End: Complemental strand, 9388 - 9280
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacccttttgct 155  Q
    |||||||||||| |||| ||||||||||||| |||| |||||||||||||||||||| ||| ||||||| |||||||||| ||| || ||  ||||||||    
T  9388 caaaaatatgaatatctcatacaaaaatatcatgtgaaaagaatttgaagatcttgtacaataatataa-aagtggcgcgccccattataatcttttgct 9290  T
Q  156 gcttttgctt 165  Q
    ||||||||||    
T  9289 gcttttgctt 9280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 9488 - 9399
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||| || |||||||||||||||| ||| | ||||||||||||||||||||| |||| |||||||||||||| ||||||    
T  9488 aaagattgagtcttgcagaaaaagaaaggagaattggagttgattcgtgccaaaaatatgaaagatcttatacaaaaatatctggtgcaa 9399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 9276 - 9187
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| ||||||||||||||| |||||||||||| ||||| ||||||||||||||||| ||| |||| |||||||||||||| ||||||    
T  9276 aaagattgagtcttggagcaaatgaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 9187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 57 - 124
Target Start/End: Complemental strand, 9176 - 9109
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatata 124  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| |||| |||||    
T  9176 caaaaatatgaatatctcatacaaaaatataatgtgcaaagaatttgaagatcttgttcaaatatata 9109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 54; Significance: 4e-22; HSPs: 4)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 22956 - 23045
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| ||||||||||||||||||||||||||||  |||| ||||||||||||||||| ||| |||| |||||||||||||| ||||||    
T  22956 aaagattgagtcttggagcaaaagaaaggagaattgcagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 23045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 100061 - 100150
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatcttgtgcaa 95  Q
    |||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||| |||| | |||||||||||| ||||||    
T  100061 aaagattgagtcttggagcaaaagaaaggagaattggagcttattcgtgccaaaaatataaaagatcttacacaaaaatatctggtgcaa 100150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 59 - 118
Target Start/End: Original strand, 23058 - 23117
Alignment:
Q  59 aaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaa 118  Q
    |||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||||    
T  23058 aaaatatgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaa 23117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 100161 - 100229
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataa 125  Q
    |||||||||||| || | ||||||||||||  ||||||||||||||||||||||||| ||| |||||||    
T  100161 caaaaatatgaatatgtcatacaaaaatataatgtgcaaagaatttgaagatcttgtacaataatataa 100229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 47; Significance: 5e-18; HSPs: 4)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 6132 - 6190
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatat 65  Q
    |||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  6132 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatat 6190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 10746 - 10804
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatat 65  Q
    |||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  10746 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatat 10804  T

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Target: scaffold0447; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 123
Target Start/End: Original strand, 6210 - 6276
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatat 123  Q
    |||||||||||| |||| ||||||||||||| |||| ||| |||||||||||||||| |||| ||||    
T  6210 caaaaatatgaatatctcatacaaaaatatcatgtgtaaaaaatttgaagatcttgtacaaatatat 6276  T

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Target: scaffold0447; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 123
Target Start/End: Original strand, 10824 - 10890
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatat 123  Q
    |||||||||||| |||| ||||||||||||| |||| ||| |||||||||||||||| |||| ||||    
T  10824 caaaaatatgaatatctcatacaaaaatatcatgtgtaaaaaatttgaagatcttgtacaaatatat 10890  T

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Target: scaffold0383 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 8741 - 8799
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatat 65  Q
    |||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  8741 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatat 8799  T

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Target: scaffold0383; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 123
Target Start/End: Original strand, 8819 - 8885
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatat 123  Q
    |||||||||||| |||| ||||||||||||| |||| ||| |||||||||||||||| |||| ||||    
T  8819 caaaaatatgaatatctcatacaaaaatatcatgtgtaaaaaatttgaagatcttgtacaaatatat 8885  T

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Target: scaffold0096 (Bit Score: 45; Significance: 9e-17; HSPs: 3)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 82 - 165
Target Start/End: Complemental strand, 38224 - 38141
Alignment:
Q  82 aatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgtccc-ttttacccttttgctgcttttgctt 165  Q
    ||||| |||||||||||||||||||||||||| ||||||||||| ||||||| || ||| || |||||||||| |||||||||||    
T  38224 aatattttgtgcaaagaatttgaagatcttgtacaaaaatataa-aagtggcacgccccattatacccttttgttgcttttgctt 38141  T

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Target: scaffold0096; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 38355 - 38289
Alignment:
Q  23 agcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaa-atctgatacaaaaatatct 88  Q
    ||||||||||||||||||| ||||| ||||||||||||||||| ||| |||| ||||||||||||||    
T  38355 agcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaatatcttatacaaaaatatct 38289  T

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Target: scaffold0096; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 57 - 118
Target Start/End: Complemental strand, 38271 - 38210
Alignment:
Q  57 caaaaatatgaaaatctgatacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaa 118  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||| || |||||||||    
T  38271 caaaaatatgaatatctcatacaaaaatattttgtgcaaagaatttgaatattttgtgcaaa 38210  T

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Target: scaffold1559 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold1559
Description:

Target: scaffold1559; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 1106 - 1191
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatat 86  Q
    ||||| |||||| ||||||||||||||||||||||||| || ||||| ||||| |||||||||| ||| || || | |||||||||    
T  1106 tatttcaaagattgagtcttggagcaaaagaaaggagatttggagctgattcgagccaaaaatacgaagatttggtgcaaaaatat 1191  T

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Target: scaffold0074 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 23175 - 23091
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaata 85  Q
    |||| ||||||| | |||||||||||||||||||| || || ||||| ||||| |||||||||||||| || | || ||||||||    
T  23175 tattcgaaagattgcgtcttggagcaaaagaaaggtgatttggagctgattcgggccaaaaatatgaagattttatgcaaaaata 23091  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 520451 - 520536
Alignment:
Q  1 tatttgaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaaaatctgatacaaaaatat 86  Q
    ||||| |||||| ||||||||||||||||||||||||| || | ||| ||||| ||  |||||| ||| || | ||||||||||||    
T  520451 tattttaaagattgagtcttggagcaaaagaaaggagatttggggctgattcgggctgaaaatacgaagatttaatacaaaaatat 520536  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 28816 - 28850
Alignment:
Q  7 aaagatggagtcttggagcaaaagaaaggagaatt 41  Q
    |||||| ||||||||||||||||||||||||||||    
T  28816 aaagattgagtcttggagcaaaagaaaggagaatt 28850  T

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