View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17018_low_20 (Length: 267)
Name: NF17018_low_20
Description: NF17018
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17018_low_20 |
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Alignment Details
Target: chr4 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 44464695 - 44464445
Alignment:
| Q |
1 |
agtccagctattcaaacagacaaattgaatcttgagcagttgcacaatagttttcaggtaagtgaaatgacaatataatttgaaaagaaatgattgaaga |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
44464695 |
agtccagctattcaaacagacaaattgaatcttgagcagttgcacaatagttttcaggtaagtgaaatgacaatataatttgaaaataaatgattgaaga |
44464596 |
T |
|
| Q |
101 |
actcaaacaaaaattttaaggtgaaaaaacaattgtctatgctatcaaaatctatgagctcaatgcatggcttctcataatctcatccctgtggaatttc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44464595 |
actcaaacaaaaattttaaggtgaaaaaacaattgtctgtgctatcaaaatctatgagctcaatgcatggcttctcataatctcatccctgtggaatttc |
44464496 |
T |
|
| Q |
201 |
aaagtccttggcagatttgaatattcctagctataaattacaactataatg |
251 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44464495 |
aaagtccttggcagatttgaatattcctagctataaattacaactataatg |
44464445 |
T |
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