View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17018_low_24 (Length: 246)
Name: NF17018_low_24
Description: NF17018
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17018_low_24 |
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Alignment Details
Target: chr1 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 7258097 - 7258337
Alignment:
| Q |
1 |
ccatcgccactgaacttgacacagaataccctgtgaacaaaagaagaagattagctgccatagagcaagataagaatatttccataaactcgacacaaac |
100 |
Q |
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| T |
7258097 |
ccatcgccactgaacttgacacagaataccctgtgaacaaaagaagaagattagctgccatagagcaagataagaatatttccataaactcgacacaaac |
7258196 |
T |
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| Q |
101 |
agcaaaagaaatcttttaaacagctgaggtatgtatcgttcgaaaagttaagcggacaattaaacacaacagaatgttcagtgcacaatatgtatattga |
200 |
Q |
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| T |
7258197 |
agcaaaagaaatcttttaaacagctgaggtatgtatcgttcgaaaagttaagcggacaattaaacacaacagaatgttcagtgcacaatatgtatattga |
7258296 |
T |
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| Q |
201 |
gtgaacctttgcattcttttagtatgataaatctctctgct |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
7258297 |
gtgaacctttgcattcttttagtatgataaatctctctgct |
7258337 |
T |
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