View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17018_low_7 (Length: 531)

Name: NF17018_low_7
Description: NF17018
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17018_low_7
NF17018_low_7
[»] chr5 (6 HSPs)
chr5 (1-460)||(40403431-40403897)
chr5 (464-514)||(39655482-39655532)
chr5 (458-498)||(3663990-3664030)
chr5 (463-498)||(37251272-37251307)
chr5 (461-518)||(34738119-34738177)
chr5 (463-498)||(30580462-30580497)
[»] chr3 (8 HSPs)
chr3 (462-518)||(24899301-24899357)
chr3 (462-518)||(24905767-24905823)
chr3 (463-498)||(3589158-3589193)
chr3 (464-498)||(1231861-1231895)
chr3 (464-498)||(23194678-23194712)
chr3 (464-498)||(17735310-17735344)
chr3 (464-498)||(19036579-19036613)
chr3 (466-498)||(2785635-2785667)
[»] chr6 (9 HSPs)
chr6 (463-516)||(9517818-9517871)
chr6 (463-498)||(1455550-1455585)
chr6 (463-498)||(1467242-1467277)
chr6 (463-498)||(21631944-21631979)
chr6 (463-498)||(25977708-25977743)
chr6 (464-498)||(13181725-13181759)
chr6 (464-498)||(14271431-14271465)
chr6 (464-498)||(34007215-34007249)
chr6 (464-498)||(34914448-34914482)
[»] chr4 (2 HSPs)
chr4 (464-516)||(33110068-33110120)
chr4 (480-516)||(53896115-53896151)
[»] chr1 (5 HSPs)
chr1 (462-518)||(15162160-15162216)
chr1 (464-509)||(36084500-36084545)
chr1 (464-498)||(8995631-8995665)
chr1 (474-518)||(3365608-3365652)
chr1 (463-514)||(9293152-9293203)
[»] chr2 (7 HSPs)
chr2 (463-514)||(492814-492865)
chr2 (466-518)||(13162737-13162789)
chr2 (463-518)||(17784689-17784745)
chr2 (463-518)||(37439733-37439788)
chr2 (464-498)||(21160738-21160772)
chr2 (464-498)||(41978352-41978386)
chr2 (463-498)||(17789363-17789398)
[»] scaffold0859 (1 HSPs)
scaffold0859 (464-518)||(4718-4772)
[»] chr8 (9 HSPs)
chr8 (463-498)||(22226876-22226911)
chr8 (463-498)||(22233218-22233253)
chr8 (463-498)||(22242611-22242646)
chr8 (464-498)||(4861320-4861354)
chr8 (464-498)||(13510722-13510756)
chr8 (464-498)||(22222046-22222080)
chr8 (464-498)||(22228388-22228422)
chr8 (464-509)||(12538906-12538951)
chr8 (465-498)||(17993625-17993658)
[»] scaffold0515 (1 HSPs)
scaffold0515 (464-498)||(7515-7549)
[»] scaffold0426 (1 HSPs)
scaffold0426 (464-498)||(2543-2577)
[»] scaffold0306 (1 HSPs)
scaffold0306 (464-498)||(7525-7559)
[»] scaffold0160 (1 HSPs)
scaffold0160 (464-498)||(34691-34725)
[»] scaffold0152 (1 HSPs)
scaffold0152 (464-498)||(25136-25170)
[»] chr7 (3 HSPs)
chr7 (464-498)||(7413190-7413224)
chr7 (464-518)||(22909851-22909905)
chr7 (464-498)||(29032161-29032195)
[»] scaffold0505 (1 HSPs)
scaffold0505 (466-498)||(354-386)
[»] scaffold0091 (1 HSPs)
scaffold0091 (464-498)||(14943-14977)


Alignment Details
Target: chr5 (Bit Score: 389; Significance: 0; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 1 - 460
Target Start/End: Original strand, 40403431 - 40403897
Alignment:
Q  1 tgtgtgactcacacctatgctacgttttctatcactggttgtttgtcgagtagtcttgtgagtggactcacatatctgacatgtgaaaaaatgatgaata 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40403431 tgtgtgactcacacctatgctacgttttctatcactggttgtttgtcgagtagtcttgtgagtggactcacatatctgacgtgtgaaaaaatgatgaata 40403530  T
Q  101 ggtttgtatccaactcttgcaaatcaacgttcttgcaactactaattgagttgtatatacgggacttaacaacatgatttctatcttaccataagaactt 200  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  40403531 ggtttgaatccaactcttgcatatcaacgttcttgcaactactaattgagttgtatatattgaacttaacaacatgatttctatcttaccataagaactt 40403630  T
Q  201 gatctttaattactactatgtgtaaatatttattactcaaacttggttttattttgattgaataaagtcagagtattattaggaagataatgaaacactt 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  40403631 gatctttaattactactatgtgtaaatatttattactcaaacttggttttattttgattgaataaattcagagtattattaggaagataatgaaacactt 40403730  T
Q  301 gtatggatgaatttaagggccttgaacttttgcaggtacgaatatgagcttatagaaaaaattgtggaaacggccattaaaatttgagatgcttg----- 395  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||         
T  40403731 gtatggatgaatttaacggccttgaacttttgcaggtatgaatatgagcttatagaaaaaattgtggaaatggccattaaaatttgagctgcttgtagta 40403830  T
Q  396 --tattgtcaagtccttgctcgagtatatcaactagaaagaagatttggaagtttctcttgctatat 460  Q
      |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  40403831 actattgtcaagtccttggtcgagtatatcaactagaaagaagatttggaagtttatcttgctatat 40403897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 464 - 514
Target Start/End: Original strand, 39655482 - 39655532
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagtactatatatcgtttcca 514  Q
    ||||||||||||||||||||||||||||||||||| | |||||||| ||||    
T  39655482 tgatgtagtatttttctatcaatcaaaagtaagtattgtatatcgtctcca 39655532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 458 - 498
Target Start/End: Original strand, 3663990 - 3664030
Alignment:
Q  458 tatggttgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  3663990 tatgtttgatgtagtatttttctatcaatcaaaagtaagta 3664030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 463 - 498
Target Start/End: Original strand, 37251272 - 37251307
Alignment:
Q  463 ttgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    ||||||||||||||||||||||||||||||||||||    
T  37251272 ttgatgtagtatttttctatcaatcaaaagtaagta 37251307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 461 - 518
Target Start/End: Original strand, 34738119 - 34738177
Alignment:
Q  461 ggttgatgtagtatttttctatcaatcaaaagtaagta-ctatatatcgtttccacagg 518  Q
    |||||||||||||||||||||||||||| |||||||||  |||||||||| ||| ||||    
T  34738119 ggttgatgtagtatttttctatcaatcagaagtaagtatttatatatcgtctcctcagg 34738177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 498
Target Start/End: Complemental strand, 30580497 - 30580462
Alignment:
Q  463 ttgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    ||||||||||||||||||| ||||||||||||||||    
T  30580497 ttgatgtagtatttttctaccaatcaaaagtaagta 30580462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 462 - 518
Target Start/End: Original strand, 24899301 - 24899357
Alignment:
Q  462 gttgatgtagtatttttctatcaatcaaaagtaagtactatatatcgtttccacagg 518  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||    
T  24899301 gttgatgtagtatttttctatcaatcaaaagtaagtattgtatatcgtctccacagg 24899357  T

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Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 462 - 518
Target Start/End: Original strand, 24905767 - 24905823
Alignment:
Q  462 gttgatgtagtatttttctatcaatcaaaagtaagtactatatatcgtttccacagg 518  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||    
T  24905767 gttgatgtagtatttttctatcaatcaaaagtaagtattgtatatcgtctccacagg 24905823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 463 - 498
Target Start/End: Complemental strand, 3589193 - 3589158
Alignment:
Q  463 ttgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    ||||||||||||||||||||||||||||||||||||    
T  3589193 ttgatgtagtatttttctatcaatcaaaagtaagta 3589158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 498
Target Start/End: Original strand, 1231861 - 1231895
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    |||||||||||||||||||||||||||||||||||    
T  1231861 tgatgtagtatttttctatcaatcaaaagtaagta 1231895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 498
Target Start/End: Complemental strand, 23194712 - 23194678
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    |||||||||||||||||||||||||||||||||||    
T  23194712 tgatgtagtatttttctatcaatcaaaagtaagta 23194678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 464 - 498
Target Start/End: Original strand, 17735310 - 17735344
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    |||||||||||||||||||||||||| ||||||||    
T  17735310 tgatgtagtatttttctatcaatcaatagtaagta 17735344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 464 - 498
Target Start/End: Original strand, 19036579 - 19036613
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    |||||||||||||||||||||||||| ||||||||    
T  19036579 tgatgtagtatttttctatcaatcaatagtaagta 19036613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 498
Target Start/End: Original strand, 2785635 - 2785667
Alignment:
Q  466 atgtagtatttttctatcaatcaaaagtaagta 498  Q
    ||||||||||||||||||||| |||||||||||    
T  2785635 atgtagtatttttctatcaataaaaagtaagta 2785667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 463 - 516
Target Start/End: Original strand, 9517818 - 9517871
Alignment:
Q  463 ttgatgtagtatttttctatcaatcaaaagtaagtactatatatcgtttccaca 516  Q
    |||||||||||||||||||||||||||||||||||| | |||||||| ||||||    
T  9517818 ttgatgtagtatttttctatcaatcaaaagtaagtattgtatatcgtctccaca 9517871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 463 - 498
Target Start/End: Complemental strand, 1455585 - 1455550
Alignment:
Q  463 ttgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    ||||||||||||||||||||||||||||||||||||    
T  1455585 ttgatgtagtatttttctatcaatcaaaagtaagta 1455550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 463 - 498
Target Start/End: Complemental strand, 1467277 - 1467242
Alignment:
Q  463 ttgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    ||||||||||||||||||||||||||||||||||||    
T  1467277 ttgatgtagtatttttctatcaatcaaaagtaagta 1467242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 463 - 498
Target Start/End: Complemental strand, 21631979 - 21631944
Alignment:
Q  463 ttgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    ||||||||||||||||||||||||||||||||||||    
T  21631979 ttgatgtagtatttttctatcaatcaaaagtaagta 21631944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 463 - 498
Target Start/End: Complemental strand, 25977743 - 25977708
Alignment:
Q  463 ttgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    ||||||||||||||||||||||||||||||||||||    
T  25977743 ttgatgtagtatttttctatcaatcaaaagtaagta 25977708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 498
Target Start/End: Original strand, 13181725 - 13181759
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    |||||||||||||||||||||||||||||||||||    
T  13181725 tgatgtagtatttttctatcaatcaaaagtaagta 13181759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 498
Target Start/End: Complemental strand, 14271465 - 14271431
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    |||||||||||||||||||||||||||||||||||    
T  14271465 tgatgtagtatttttctatcaatcaaaagtaagta 14271431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 498
Target Start/End: Complemental strand, 34007249 - 34007215
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    |||||||||||||||||||||||||||||||||||    
T  34007249 tgatgtagtatttttctatcaatcaaaagtaagta 34007215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 498
Target Start/End: Complemental strand, 34914482 - 34914448
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    |||||||||||||||||||||||||||||||||||    
T  34914482 tgatgtagtatttttctatcaatcaaaagtaagta 34914448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 464 - 516
Target Start/End: Original strand, 33110068 - 33110120
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagtactatatatcgtttccaca 516  Q
    ||||||||||||||||||||||||||||||||||| | |||||||| ||||||    
T  33110068 tgatgtagtatttttctatcaatcaaaagtaagtattgtatatcgtctccaca 33110120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 480 - 516
Target Start/End: Complemental strand, 53896151 - 53896115
Alignment:
Q  480 tatcaatcaaaagtaagtactatatatcgtttccaca 516  Q
    ||||||||||||||||||| | |||||||||||||||    
T  53896151 tatcaatcaaaagtaagtattgtatatcgtttccaca 53896115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 462 - 518
Target Start/End: Complemental strand, 15162216 - 15162160
Alignment:
Q  462 gttgatgtagtatttttctatcaatcaaaagtaagtactatatatcgtttccacagg 518  Q
    |||||||||||||||||||||||||| |||||||||| | |||||||| ||||||||    
T  15162216 gttgatgtagtatttttctatcaatcgaaagtaagtattgtatatcgtctccacagg 15162160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 464 - 509
Target Start/End: Complemental strand, 36084545 - 36084500
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagtactatatatcgt 509  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||    
T  36084545 tgatgtagtatttttctatcaatcaaaagtaagtattgtatatcgt 36084500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 498
Target Start/End: Original strand, 8995631 - 8995665
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    |||||||||||||||||||||||||||||||||||    
T  8995631 tgatgtagtatttttctatcaatcaaaagtaagta 8995665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 474 - 518
Target Start/End: Original strand, 3365608 - 3365652
Alignment:
Q  474 tttttctatcaatcaaaagtaagtactatatatcgtttccacagg 518  Q
    ||||||||||||||||||||||||| | |||||||| ||||||||    
T  3365608 tttttctatcaatcaaaagtaagtattgtatatcgtctccacagg 3365652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 514
Target Start/End: Complemental strand, 9293203 - 9293152
Alignment:
Q  463 ttgatgtagtatttttctatcaatcaaaagtaagtactatatatcgtttcca 514  Q
    |||||||| ||||||||| ||||||||||||||||| | |||||||| ||||    
T  9293203 ttgatgtaatatttttctttcaatcaaaagtaagtattgtatatcgtctcca 9293152  T

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Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 514
Target Start/End: Complemental strand, 492865 - 492814
Alignment:
Q  463 ttgatgtagtatttttctatcaatcaaaagtaagtactatatatcgtttcca 514  Q
    |||||||||||||||||||||||||||||||||||| | |||||||| ||||    
T  492865 ttgatgtagtatttttctatcaatcaaaagtaagtattgtatatcgtctcca 492814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 466 - 518
Target Start/End: Original strand, 13162737 - 13162789
Alignment:
Q  466 atgtagtatttttctatcaatcaaaagtaagtactatatatcgtttccacagg 518  Q
    ||||||||||||||||||||||||||||||||| | |||||||| ||| ||||    
T  13162737 atgtagtatttttctatcaatcaaaagtaagtattgtatatcgtctcctcagg 13162789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 518
Target Start/End: Complemental strand, 17784745 - 17784689
Alignment:
Q  463 ttgatgtagtatttttctatcaatcaaaagtaagta-ctatatatcgtttccacagg 518  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||| ||| ||||    
T  17784745 ttgatgtagtatttttctatcaatcaaaagtaagtatttatatatcgtctcctcagg 17784689  T

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Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 463 - 518
Target Start/End: Complemental strand, 37439788 - 37439733
Alignment:
Q  463 ttgatgtagtatttttctatcaatcaaaagtaagtactatatatcgtttccacagg 518  Q
    |||||||||||||||||||||||||||||||||||  | |||||||| ||| ||||    
T  37439788 ttgatgtagtatttttctatcaatcaaaagtaagtgttttatatcgtctcctcagg 37439733  T

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Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 498
Target Start/End: Complemental strand, 21160772 - 21160738
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    |||||||||||||||||||||||||||||||||||    
T  21160772 tgatgtagtatttttctatcaatcaaaagtaagta 21160738  T

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Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 498
Target Start/End: Complemental strand, 41978386 - 41978352
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    |||||||||||||||||||||||||||||||||||    
T  41978386 tgatgtagtatttttctatcaatcaaaagtaagta 41978352  T

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Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 498
Target Start/End: Complemental strand, 17789398 - 17789363
Alignment:
Q  463 ttgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    |||||| |||||||||||||||||||||||||||||    
T  17789398 ttgatgcagtatttttctatcaatcaaaagtaagta 17789363  T

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Target: scaffold0859 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 464 - 518
Target Start/End: Original strand, 4718 - 4772
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagtactatatatcgtttccacagg 518  Q
    ||||||||||||||||||||||||||||||||||| | ||||| || ||||||||    
T  4718 tgatgtagtatttttctatcaatcaaaagtaagtattgtatattgtctccacagg 4772  T

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Target: chr8 (Bit Score: 36; Significance: 0.00000000005; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 463 - 498
Target Start/End: Original strand, 22226876 - 22226911
Alignment:
Q  463 ttgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    ||||||||||||||||||||||||||||||||||||    
T  22226876 ttgatgtagtatttttctatcaatcaaaagtaagta 22226911  T

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Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 463 - 498
Target Start/End: Original strand, 22233218 - 22233253
Alignment:
Q  463 ttgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    ||||||||||||||||||||||||||||||||||||    
T  22233218 ttgatgtagtatttttctatcaatcaaaagtaagta 22233253  T

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Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 463 - 498
Target Start/End: Original strand, 22242611 - 22242646
Alignment:
Q  463 ttgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    ||||||||||||||||||||||||||||||||||||    
T  22242611 ttgatgtagtatttttctatcaatcaaaagtaagta 22242646  T

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Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 498
Target Start/End: Original strand, 4861320 - 4861354
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    |||||||||||||||||||||||||||||||||||    
T  4861320 tgatgtagtatttttctatcaatcaaaagtaagta 4861354  T

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Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 498
Target Start/End: Complemental strand, 13510756 - 13510722
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    |||||||||||||||||||||||||||||||||||    
T  13510756 tgatgtagtatttttctatcaatcaaaagtaagta 13510722  T

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Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 498
Target Start/End: Original strand, 22222046 - 22222080
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    |||||||||||||||||||||||||||||||||||    
T  22222046 tgatgtagtatttttctatcaatcaaaagtaagta 22222080  T

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Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 498
Target Start/End: Original strand, 22228388 - 22228422
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    |||||||||||||||||||||||||||||||||||    
T  22228388 tgatgtagtatttttctatcaatcaaaagtaagta 22228422  T

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Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 464 - 509
Target Start/End: Complemental strand, 12538951 - 12538906
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagtactatatatcgt 509  Q
    ||||||| ||||||||||||||||||||||||||| | ||||||||    
T  12538951 tgatgtaatatttttctatcaatcaaaagtaagtattgtatatcgt 12538906  T

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Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 465 - 498
Target Start/End: Complemental strand, 17993658 - 17993625
Alignment:
Q  465 gatgtagtatttttctatcaatcaaaagtaagta 498  Q
    ||||||||||||||||||||||||||||||||||    
T  17993658 gatgtagtatttttctatcaatcaaaagtaagta 17993625  T

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Target: scaffold0515 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 498
Target Start/End: Complemental strand, 7549 - 7515
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    |||||||||||||||||||||||||||||||||||    
T  7549 tgatgtagtatttttctatcaatcaaaagtaagta 7515  T

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Target: scaffold0426 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 498
Target Start/End: Complemental strand, 2577 - 2543
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    |||||||||||||||||||||||||||||||||||    
T  2577 tgatgtagtatttttctatcaatcaaaagtaagta 2543  T

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Target: scaffold0306 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 498
Target Start/End: Complemental strand, 7559 - 7525
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    |||||||||||||||||||||||||||||||||||    
T  7559 tgatgtagtatttttctatcaatcaaaagtaagta 7525  T

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Target: scaffold0160 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 498
Target Start/End: Original strand, 34691 - 34725
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    |||||||||||||||||||||||||||||||||||    
T  34691 tgatgtagtatttttctatcaatcaaaagtaagta 34725  T

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Target: scaffold0152 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 498
Target Start/End: Complemental strand, 25170 - 25136
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    |||||||||||||||||||||||||||||||||||    
T  25170 tgatgtagtatttttctatcaatcaaaagtaagta 25136  T

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Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 498
Target Start/End: Complemental strand, 7413224 - 7413190
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    |||||||||||||||||||||||||||||||||||    
T  7413224 tgatgtagtatttttctatcaatcaaaagtaagta 7413190  T

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Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 518
Target Start/End: Complemental strand, 22909905 - 22909851
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagtactatatatcgtttccacagg 518  Q
    ||||| ||||||||||||||||||||||||||||| | |||||| | ||||||||    
T  22909905 tgatgcagtatttttctatcaatcaaaagtaagtattgtatatcatctccacagg 22909851  T

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Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 498
Target Start/End: Original strand, 29032161 - 29032195
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    |||||||||||||||||||||||||||||||||||    
T  29032161 tgatgtagtatttttctatcaatcaaaagtaagta 29032195  T

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Target: scaffold0505 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 466 - 498
Target Start/End: Original strand, 354 - 386
Alignment:
Q  466 atgtagtatttttctatcaatcaaaagtaagta 498  Q
    |||||||||||||||||||||||||||||||||    
T  354 atgtagtatttttctatcaatcaaaagtaagta 386  T

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Target: scaffold0091 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 464 - 498
Target Start/End: Complemental strand, 14977 - 14943
Alignment:
Q  464 tgatgtagtatttttctatcaatcaaaagtaagta 498  Q
    |||||||||||||||||||||||||||||| ||||    
T  14977 tgatgtagtatttttctatcaatcaaaagttagta 14943  T

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