View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1701_high_21 (Length: 312)

Name: NF1701_high_21
Description: NF1701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1701_high_21
NF1701_high_21
[»] chr8 (40 HSPs)
chr8 (5-297)||(33173024-33173315)
chr8 (1-70)||(33610358-33610427)
chr8 (1-59)||(18040927-18040985)
chr8 (3-69)||(23159030-23159096)
chr8 (1-58)||(31590809-31590866)
chr8 (7-60)||(22735204-22735257)
chr8 (1-58)||(26012285-26012342)
chr8 (1-70)||(37651813-37651881)
chr8 (1-69)||(23218674-23218741)
chr8 (1-57)||(23223338-23223394)
chr8 (1-57)||(45464501-45464557)
chr8 (1-59)||(29307290-29307349)
chr8 (1-59)||(23351022-23351080)
chr8 (1-59)||(24908604-24908662)
chr8 (1-59)||(24910825-24910883)
chr8 (4-59)||(19330723-19330778)
chr8 (4-59)||(22723946-22724001)
chr8 (1-59)||(24240409-24240466)
chr8 (1-59)||(33529278-33529336)
chr8 (3-59)||(23150652-23150709)
chr8 (1-69)||(24278635-24278704)
chr8 (1-70)||(24968658-24968726)
chr8 (3-59)||(5855407-5855463)
chr8 (17-69)||(22496605-22496657)
chr8 (1-69)||(22888586-22888653)
chr8 (1-59)||(41506245-41506300)
chr8 (1-59)||(25297011-25297070)
chr8 (1-59)||(25759031-25759090)
chr8 (10-57)||(39446084-39446131)
chr8 (1-59)||(45558315-45558371)
chr8 (2-59)||(24551968-24552022)
chr8 (1-69)||(38534522-38534591)
chr8 (1-57)||(17502981-17503036)
chr8 (3-59)||(22745528-22745583)
chr8 (1-59)||(17286026-17286082)
chr8 (1-59)||(21258854-21258913)
chr8 (2-49)||(27232445-27232491)
chr8 (1-40)||(31193683-31193722)
chr8 (1-59)||(15934044-15934102)
chr8 (1-70)||(22982140-22982209)
[»] chr4 (30 HSPs)
chr4 (1-69)||(10375329-10375397)
chr4 (1-59)||(13589463-13589521)
chr4 (1-70)||(41916127-41916196)
chr4 (1-69)||(47467706-47467774)
chr4 (1-59)||(15212954-15213012)
chr4 (1-58)||(7185206-7185263)
chr4 (1-70)||(14902078-14902149)
chr4 (1-69)||(30231832-30231900)
chr4 (4-59)||(49072515-49072570)
chr4 (1-59)||(40904301-40904358)
chr4 (1-59)||(50219339-50219396)
chr4 (3-59)||(27961825-27961881)
chr4 (1-49)||(37956376-37956424)
chr4 (1-59)||(13438402-13438459)
chr4 (1-59)||(19560183-19560240)
chr4 (1-59)||(31635380-31635438)
chr4 (1-41)||(18235610-18235650)
chr4 (1-59)||(18493453-18493512)
chr4 (8-59)||(41255715-41255765)
chr4 (1-59)||(54399179-54399240)
chr4 (1-59)||(15045678-15045736)
chr4 (1-59)||(15108688-15108746)
chr4 (1-58)||(13808852-13808908)
chr4 (1-58)||(36990284-36990340)
chr4 (1-57)||(10236665-10236720)
chr4 (1-37)||(12132996-12133032)
chr4 (15-59)||(15012632-15012676)
chr4 (1-59)||(12244253-12244309)
chr4 (8-55)||(19821124-19821170)
chr4 (5-59)||(18277232-18277286)
[»] chr6 (32 HSPs)
chr6 (1-79)||(33537686-33537764)
chr6 (1-70)||(22461477-22461546)
chr6 (1-59)||(17082518-17082576)
chr6 (4-69)||(18506716-18506781)
chr6 (4-57)||(22848864-22848917)
chr6 (1-69)||(15889097-15889165)
chr6 (1-57)||(23223577-23223633)
chr6 (1-60)||(116445-116504)
chr6 (1-59)||(21932032-21932090)
chr6 (1-59)||(25654984-25655042)
chr6 (1-59)||(32352821-32352879)
chr6 (1-49)||(15004293-15004341)
chr6 (1-57)||(17547050-17547106)
chr6 (1-59)||(15079086-15079144)
chr6 (1-41)||(18628944-18628984)
chr6 (7-59)||(35135352-35135404)
chr6 (17-59)||(29157848-29157890)
chr6 (7-69)||(33325548-33325610)
chr6 (5-59)||(22582138-22582192)
chr6 (5-59)||(22584928-22584982)
chr6 (5-59)||(22589759-22589813)
chr6 (20-74)||(34967675-34967729)
chr6 (1-58)||(25920430-25920486)
chr6 (17-57)||(19171394-19171434)
chr6 (17-69)||(31466925-31466976)
chr6 (1-56)||(14153104-14153158)
chr6 (1-70)||(29606232-29606302)
chr6 (5-70)||(14672278-14672343)
chr6 (1-49)||(14128954-14129001)
chr6 (11-59)||(21265738-21265786)
chr6 (7-59)||(21410391-21410443)
chr6 (1-57)||(22578452-22578507)
[»] chr5 (28 HSPs)
chr5 (1-56)||(23233905-23233960)
chr5 (1-69)||(6457450-6457517)
chr5 (1-69)||(11966128-11966196)
chr5 (1-67)||(5621150-5621216)
chr5 (1-69)||(3674736-3674804)
chr5 (3-59)||(23467307-23467363)
chr5 (1-59)||(23418093-23418151)
chr5 (1-55)||(21215810-21215864)
chr5 (1-59)||(37984217-37984275)
chr5 (1-58)||(16834691-16834747)
chr5 (1-71)||(26559179-26559251)
chr5 (1-69)||(19349885-19349953)
chr5 (1-57)||(19874555-19874611)
chr5 (3-59)||(32965057-32965113)
chr5 (1-59)||(21110570-21110627)
chr5 (1-59)||(21222006-21222064)
chr5 (1-57)||(11762868-11762923)
chr5 (1-69)||(16596343-16596411)
chr5 (1-41)||(22662045-22662085)
chr5 (5-57)||(22886417-22886468)
chr5 (241-296)||(5065963-5066018)
chr5 (1-59)||(433304-433361)
chr5 (1-59)||(3420368-3420426)
chr5 (1-59)||(5450157-5450214)
chr5 (1-59)||(24224743-24224801)
chr5 (1-57)||(7729293-7729349)
chr5 (4-59)||(24084689-24084743)
chr5 (6-59)||(2032655-2032706)
[»] chr7 (32 HSPs)
chr7 (1-59)||(9723196-9723254)
chr7 (1-70)||(45146184-45146253)
chr7 (1-59)||(33560467-33560525)
chr7 (1-57)||(21675119-21675175)
chr7 (1-59)||(14268242-14268301)
chr7 (1-59)||(9251259-9251317)
chr7 (1-69)||(31502017-31502084)
chr7 (1-69)||(46474766-46474834)
chr7 (4-59)||(45150386-45150441)
chr7 (1-59)||(9318932-9318990)
chr7 (1-59)||(9612161-9612219)
chr7 (1-59)||(9839732-9839790)
chr7 (1-59)||(20582950-20583008)
chr7 (1-69)||(13275626-13275694)
chr7 (1-69)||(13448183-13448250)
chr7 (5-69)||(16914313-16914377)
chr7 (1-57)||(34240545-34240600)
chr7 (4-59)||(13352781-13352836)
chr7 (1-68)||(39285560-39285626)
chr7 (15-71)||(18078877-18078933)
chr7 (1-69)||(28392524-28392591)
chr7 (1-41)||(49047033-49047073)
chr7 (1-56)||(48357438-48357493)
chr7 (1-58)||(6321730-6321787)
chr7 (5-59)||(38424940-38424994)
chr7 (1-59)||(14935975-14936031)
chr7 (1-59)||(15363568-15363624)
chr7 (1-59)||(16920357-16920415)
chr7 (1-58)||(28722902-28722960)
chr7 (5-58)||(10331898-10331949)
chr7 (1-58)||(17223390-17223446)
chr7 (15-59)||(17923321-17923365)
[»] scaffold0022 (2 HSPs)
scaffold0022 (1-70)||(67343-67412)
scaffold0022 (1-59)||(132658-132715)
[»] chr3 (45 HSPs)
chr3 (1-58)||(38375062-38375119)
chr3 (1-69)||(31411022-31411090)
chr3 (1-69)||(39657394-39657462)
chr3 (1-59)||(17758062-17758120)
chr3 (1-59)||(19059382-19059440)
chr3 (1-67)||(21166437-21166503)
chr3 (1-73)||(38810315-38810387)
chr3 (1-68)||(33368317-33368384)
chr3 (1-59)||(17586273-17586330)
chr3 (1-59)||(40939996-40940054)
chr3 (1-59)||(43426906-43426963)
chr3 (1-58)||(13300789-13300846)
chr3 (1-41)||(9150164-9150204)
chr3 (1-49)||(13311454-13311502)
chr3 (7-59)||(14081352-14081404)
chr3 (1-69)||(25103346-25103413)
chr3 (1-69)||(34560649-34560717)
chr3 (1-58)||(8605668-8605724)
chr3 (1-70)||(8632627-8632695)
chr3 (1-46)||(10913709-10913754)
chr3 (7-59)||(11060326-11060378)
chr3 (1-69)||(11514863-11514930)
chr3 (1-69)||(14058549-14058617)
chr3 (1-57)||(17192361-17192417)
chr3 (5-69)||(20421669-20421733)
chr3 (1-59)||(12487116-12487175)
chr3 (1-44)||(17140360-17140403)
chr3 (1-59)||(18970739-18970797)
chr3 (1-40)||(50111409-50111448)
chr3 (1-59)||(12032334-12032392)
chr3 (1-58)||(15521813-15521871)
chr3 (1-59)||(17205494-17205552)
chr3 (1-59)||(47784080-47784137)
chr3 (7-59)||(18747943-18747996)
chr3 (1-57)||(12530848-12530903)
chr3 (1-40)||(9590096-9590135)
chr3 (1-59)||(16880981-16881040)
chr3 (1-59)||(40038295-40038353)
chr3 (13-70)||(6713204-6713261)
chr3 (7-44)||(30208054-30208090)
chr3 (10-59)||(55193514-55193563)
chr3 (7-59)||(4161590-4161641)
chr3 (5-72)||(11328289-11328357)
chr3 (5-69)||(11832264-11832328)
chr3 (1-69)||(48422422-48422489)
[»] chr2 (20 HSPs)
chr2 (1-69)||(24278583-24278651)
chr2 (1-59)||(9638227-9638285)
chr2 (1-70)||(19433137-19433206)
chr2 (1-69)||(68843-68911)
chr2 (4-59)||(6095479-6095534)
chr2 (1-59)||(723238-723296)
chr2 (1-59)||(19667397-19667455)
chr2 (1-58)||(19660751-19660808)
chr2 (1-59)||(43646710-43646766)
chr2 (1-59)||(16292190-16292248)
chr2 (1-41)||(22579238-22579278)
chr2 (1-71)||(16446598-16446668)
chr2 (1-40)||(24841734-24841773)
chr2 (13-59)||(24885526-24885572)
chr2 (1-69)||(2155188-2155256)
chr2 (13-57)||(25595856-25595899)
chr2 (1-60)||(7322380-7322438)
chr2 (4-59)||(11010508-11010562)
chr2 (1-59)||(24086770-24086829)
chr2 (20-59)||(24293862-24293901)
[»] scaffold0406 (1 HSPs)
scaffold0406 (1-58)||(14834-14891)
[»] scaffold0561 (1 HSPs)
scaffold0561 (1-57)||(2314-2370)
[»] scaffold0149 (1 HSPs)
scaffold0149 (5-69)||(32729-32793)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-57)||(32791-32847)
[»] chr1 (24 HSPs)
chr1 (1-69)||(5767553-5767621)
chr1 (1-59)||(33398142-33398200)
chr1 (1-58)||(8537319-8537374)
chr1 (1-58)||(8602558-8602613)
chr1 (1-59)||(22828761-22828819)
chr1 (1-59)||(36355608-36355666)
chr1 (5-70)||(19603966-19604031)
chr1 (5-69)||(16646789-16646853)
chr1 (1-59)||(20839186-20839243)
chr1 (1-59)||(25094682-25094739)
chr1 (4-58)||(52401426-52401479)
chr1 (1-58)||(5470360-5470417)
chr1 (2-59)||(17609724-17609781)
chr1 (1-70)||(38033008-38033077)
chr1 (1-59)||(17023796-17023854)
chr1 (2-59)||(37233225-37233282)
chr1 (1-58)||(49996626-49996682)
chr1 (7-59)||(20177976-20178028)
chr1 (1-59)||(75783-75841)
chr1 (20-59)||(22142691-22142730)
chr1 (4-58)||(18851787-18851840)
chr1 (18-59)||(21195812-21195853)
chr1 (1-57)||(9783415-9783470)
chr1 (5-69)||(21424051-21424115)
[»] scaffold1932 (1 HSPs)
scaffold1932 (1-59)||(743-800)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-59)||(5394-5452)
[»] scaffold0130 (1 HSPs)
scaffold0130 (1-83)||(26338-26419)
[»] scaffold0057 (1 HSPs)
scaffold0057 (4-70)||(6669-6735)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-70)||(69643-69712)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-57)||(86354-86410)
[»] scaffold1092 (1 HSPs)
scaffold1092 (1-71)||(2500-2568)
[»] scaffold0357 (1 HSPs)
scaffold0357 (1-59)||(7209-7267)
[»] scaffold0342 (1 HSPs)
scaffold0342 (1-59)||(13139-13197)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-59)||(196647-196705)
[»] scaffold0610 (1 HSPs)
scaffold0610 (1-57)||(9432-9488)
[»] scaffold0231 (1 HSPs)
scaffold0231 (7-59)||(12057-12109)
[»] scaffold0012 (1 HSPs)
scaffold0012 (17-69)||(180256-180308)
[»] scaffold0385 (1 HSPs)
scaffold0385 (4-59)||(11994-12048)
[»] scaffold0123 (1 HSPs)
scaffold0123 (1-72)||(11746-11817)
[»] scaffold0700 (1 HSPs)
scaffold0700 (1-59)||(3320-3378)
[»] scaffold0601 (1 HSPs)
scaffold0601 (1-59)||(243-301)
[»] scaffold0387 (1 HSPs)
scaffold0387 (1-58)||(324-382)
[»] scaffold0165 (1 HSPs)
scaffold0165 (1-59)||(30784-30842)
[»] scaffold0153 (1 HSPs)
scaffold0153 (5-59)||(9293-9346)
[»] scaffold0080 (1 HSPs)
scaffold0080 (1-59)||(23081-23138)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-69)||(108828-108895)
[»] scaffold0507 (1 HSPs)
scaffold0507 (1-59)||(912-968)
[»] scaffold0162 (1 HSPs)
scaffold0162 (1-44)||(6408-6451)
[»] scaffold0095 (1 HSPs)
scaffold0095 (10-57)||(33046-33093)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-59)||(87178-87234)
scaffold0004 (1-59)||(28293-28350)
[»] scaffold0634 (1 HSPs)
scaffold0634 (1-51)||(6240-6289)
[»] scaffold0389 (1 HSPs)
scaffold0389 (1-59)||(11325-11382)
[»] scaffold0315 (1 HSPs)
scaffold0315 (15-69)||(11859-11913)
[»] scaffold0151 (1 HSPs)
scaffold0151 (1-59)||(21732-21789)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-58)||(103938-103996)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-59)||(80410-80467)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-70)||(89197-89265)
[»] scaffold0183 (1 HSPs)
scaffold0183 (7-59)||(11853-11905)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-69)||(31841-31909)
[»] scaffold1295 (1 HSPs)
scaffold1295 (1-59)||(922-978)
[»] scaffold0589 (1 HSPs)
scaffold0589 (1-59)||(8654-8713)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-44)||(160169-160212)
[»] scaffold0808 (1 HSPs)
scaffold0808 (1-55)||(1637-1690)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-59)||(70281-70339)
[»] scaffold0643 (1 HSPs)
scaffold0643 (3-59)||(360-416)


Alignment Details
Target: chr8 (Bit Score: 261; Significance: 1e-145; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 5 - 297
Target Start/End: Original strand, 33173024 - 33173315
Alignment:
Q  5 acaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttacaaaaaccatctccttcatcttcttcaatttattttc 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  33173024 acaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgg-ttgttacaaaaaccatctccttcatcttcttcaatttattttc 33173122  T
Q  105 tttccatcttcttatttccttgcgactatcactaatttttgaagaaaccttatcttttacctattcttcttcatctctctcctcttcacctgcatgcagt 204  Q
    ||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33173123 tttccatcttcttattgtcttgcgtctatcactaatttttgaagaaaccttatcttttacctattcttcttcatctctctcctcttcacatgcatgcagt 33173222  T
Q  205 gctcttcaagttgagttagacgaaacaacaatgctgtgaggtgatgaattttgtctacaaagttcatcaccataagctttgagagcttgtttt 297  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33173223 gctcttcaagttgagttagacgaaacaacaatgttgtgaggtgatgaattttgtctacaaagttcatcaccataagctttgagagcttgtttt 33173315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 33610427 - 33610358
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttacaa 70  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||    
T  33610427 acacacaagcatatataaacacatattaaaacaattaaaaataaatctagcgaaaatcgagttgttacaa 33610358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 18040985 - 18040927
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  18040985 acacacaagcacatataaatacatattaaaacaattaaaaataattctagcgaaaatcg 18040927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 23159030 - 23159096
Alignment:
Q  3 acacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||  ||||||||    
T  23159030 acacaagcacatataaacacataataaaacaattaaaaataaatctaacgaaaatcgggttgttaca 23159096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 31590809 - 31590866
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatc 58  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  31590809 acacacaagtacatataaacacatattaaaacaattaaaaataattctagcgaaaatc 31590866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 22735257 - 22735204
Alignment:
Q  7 aagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcga 60  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  22735257 aagcacatataaacacataataaaacaattaaaaataaatctaacgaaaatcga 22735204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 26012285 - 26012342
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatc 58  Q
    ||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||    
T  26012285 acacacaagcacaaataaacacataataaaacaattaaaaataaatctaacgaaaatc 26012342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 37651881 - 37651813
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttacaa 70  Q
    ||||||||||||| ||||||||||| |||||||||| ||||||| |||||||||||||||| ||||||||    
T  37651881 acacacaagcacaaataaacacataataaaacaatt-aaaataaatctaacgaaaatcgaactgttacaa 37651813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 23218674 - 23218741
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||  ||||||||    
T  23218674 acacacgagcacatataaacacatattaaaacaattaaaaataa-tctagcgaaaatcgggttgttaca 23218741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 23223394 - 23223338
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaat 57  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  23223394 acacaaaagcacatataaacacatattaaaacaattaaaaataaatctagcgaaaat 23223338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 45464557 - 45464501
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaat 57  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||    
T  45464557 acacacaagtacatataaacacatattaaaacaattaaaaataaatctagcgaaaat 45464501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 29307290 - 29307349
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaatt-aaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||    
T  29307290 acacacaagcacatataaacaaatattaaaacaattaaaaaataaatctaacgaaaatcg 29307349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 23351022 - 23351080
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| |||| |||||||||    
T  23351022 acacacaagcacttataaccacatattaaaacaattaaaaataaatctagcgaaaatcg 23351080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 24908604 - 24908662
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||| ||| ||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  24908604 acacataaggacatataaacacatattaaaataattaaaaataaatctaacgaaaatcg 24908662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 24910825 - 24910883
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||| ||| ||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  24910825 acacataaggacatataaacacatattaaaataattaaaaataaatctaacgaaaatcg 24910883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 19330778 - 19330723
Alignment:
Q  4 cacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||| |||||||||||||||||||||||| ||| ||||| ||||||||    
T  19330778 cacaagcacatagaaacacatattaaaacaattaaaactaaatctaaagaaaatcg 19330723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 22723946 - 22724001
Alignment:
Q  4 cacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||| ||||||||||||||| |||||||||||| |||| |||||||||    
T  22723946 cacaagcacatacaaacacatattaaaataattaaaaataagtctagcgaaaatcg 22724001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 24240409 - 24240466
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||| |||||||||||||||||||| ||||||| |||| |||||||||    
T  24240409 acacacaagcacataaaaacacatattaaaacaatt-aaaataaatctagcgaaaatcg 24240466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 33529278 - 33529336
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||| |||||||||||||||||||||||||||| |||||| | || |||||||||    
T  33529278 acacacaaacacatataaacacatattaaaacaattataaataaatatagcgaaaatcg 33529336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 23150652 - 23150709
Alignment:
Q  3 acacaagcacatataaacacatattaaaacaatt-aaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||||||||||| |||||||||| |||||||| |||||| |||||||    
T  23150652 acacaagcacatataaacacataataaaacaattaaaaaataaatctaaccaaaatcg 23150709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 24278704 - 24278635
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaatta-aaaataattctaacgaaaatcgaattgttaca 69  Q
    ||||||||||||| ||||||||||| ||||||||||| ||||||| |||||||| |||||  ||||||||    
T  24278704 acacacaagcacaaataaacacataataaaacaattaaaaaataaatctaacgataatcgggttgttaca 24278635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 24968726 - 24968658
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttacaa 70  Q
    ||||||||  |||||||||||||||||||||||||| ||||||| |||| ||||||||||  ||||||||    
T  24968726 acacacaacaacatataaacacatattaaaacaatt-aaaataaatctagcgaaaatcgagctgttacaa 24968658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 5855407 - 5855463
Alignment:
Q  3 acacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||| ||||||||||| |||||||||||||||||| |||| | |||||||    
T  5855407 acacaagcacaaataaacacataataaaacaattaaaaataaatctagcaaaaatcg 5855463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 22496657 - 22496605
Alignment:
Q  17 aaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    |||||| |||||||||||||||||||||||||| ||||||||| | |||||||    
T  22496657 aaacacgtattaaaacaattaaaaataattctagcgaaaatcggactgttaca 22496605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 22888586 - 22888653
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    ||||||||||||||| |||||||||||||||||||| || |||| |||||| |||||||  ||||||||    
T  22888586 acacacaagcacataaaaacacatattaaaacaatt-aagataaatctaacaaaaatcgggttgttaca 22888653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 41506300 - 41506245
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||| |||||||||||   ||| |||||||||||||||||||||||||||    
T  41506300 acacacaagcacaaataaacacata---aaataattaaaaataattctaacgaaaatcg 41506245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 25297011 - 25297070
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaatt-aaaaataattctaacgaaaatcg 59  Q
    |||||||| |||||||||||||||| |||||||||| |||||||| |||| |||||||||    
T  25297011 acacacaaacacatataaacacataataaaacaattaaaaaataaatctagcgaaaatcg 25297070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 25759031 - 25759090
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaatt-aaaaataattctaacgaaaatcg 59  Q
    |||||||| |||||||||||||||| |||||||||| |||||||| |||| |||||||||    
T  25759031 acacacaaacacatataaacacataataaaacaattaaaaaataaatctagcgaaaatcg 25759090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 39446131 - 39446084
Alignment:
Q  10 cacatataaacacatattaaaacaattaaaaataattctaacgaaaat 57  Q
    |||||||||||||||| |||||||||||||||||| |||| |||||||    
T  39446131 cacatataaacacataataaaacaattaaaaataaatctagcgaaaat 39446084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 45558371 - 45558315
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||| || |||||||||    
T  45558371 acacacaagcacatagaaaca--tattaaaacaattaaaaataattatagcgaaaatcg 45558315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 24552022 - 24551968
Alignment:
Q  2 cacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||||||||||||  |||||||||||||||||||| |||| |||||||||    
T  24552022 cacacaagcacatataaacac--attaaaacaattaaaaataa-tctagcgaaaatcg 24551968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 38534522 - 38534591
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaatt-aaaaataattctaacgaaaatcgaattgttaca 69  Q
    |||||||| |||||||||||||||| |||||||||| |||||||| |||| | ||||||| | |||||||    
T  38534522 acacacaaacacatataaacacataataaaacaattaaaaaataaatctagcaaaaatcggactgttaca 38534591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17502981 - 17503036
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaat 57  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||| |||| |||||||    
T  17502981 acacaaaagcacataaaaacacatatt-aaacaattaaaaataaatctagcgaaaat 17503036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 22745528 - 22745583
Alignment:
Q  3 acacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||| | ||||||| |||||||||||||||||| |||| |||||||||    
T  22745528 acacaagcacata-agacacataataaaacaattaaaaataaatctagcgaaaatcg 22745583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 17286026 - 17286082
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||| |||||||||   ||||| |||||||||||||||||||| ||||||    
T  17286026 acacacaagcacaaataaacacaa--taaaataattaaaaataattctaacggaaatcg 17286082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 21258913 - 21258854
Alignment:
Q  1 acacacaagcacatataaacacat-attaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||||||| ||||||| || ||||||||||||||||| |||  |||||||||    
T  21258913 acacacaagcacatatgaacacataataaaaacaattaaaaataaatcttgcgaaaatcg 21258854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 27232491 - 27232445
Alignment:
Q  2 cacacaagcacatataaacacatattaaaacaattaaaaataattcta 49  Q
    |||||||||||||| ||||||||||| |||||||||||||||| ||||    
T  27232491 cacacaagcacataaaaacacatatt-aaacaattaaaaataaatcta 27232445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 31193722 - 31193683
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaa 40  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  31193722 acacacaagcacatataatcacataataaaacaattaaaa 31193683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 15934044 - 15934102
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||| ||| ||||| ||||||||| ||||| |||||||||||| |||| |||||||||    
T  15934044 acacaaaagtacataaaaacacataataaaataattaaaaataaatctagcgaaaatcg 15934102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 22982140 - 22982209
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttacaa 70  Q
    ||||||||||||||||||||||| | |||||  | | ||||||| | ||||||||||||  |||||||||    
T  22982140 acacacaagcacatataaacacacaataaaagtaattaaaataaatataacgaaaatcgggttgttacaa 22982209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 10375329 - 10375397
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  10375329 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgggttgttaca 10375397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 13589521 - 13589463
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13589521 acacacaagcacatataaacacatattaaaacaattaaaaataattctagcgaaaatcg 13589463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 41916196 - 41916127
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttacaa 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| | ||||||||    
T  41916196 acacacaagcacatataaacacatattaaaacaattaaaaataattctagcaaaaatcggactgttacaa 41916127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 47467774 - 47467706
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||  ||||||||    
T  47467774 acacacaagcacataaaaacacatattaaaacaattaaaaataattctagcgaaaatcgggttgttaca 47467706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 15213012 - 15212954
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  15213012 acacacaagcacatataaacacatattaaaacaattaaaaataaatctagcgaaaatcg 15212954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7185263 - 7185206
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatc 58  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  7185263 acacacaagcacatataaacacatattaaaacaattaaaaataaatctagcgaaaatc 7185206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 14902078 - 14902149
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaatta--aaaataattctaacgaaaatcgaattgttacaa 70  Q
    |||||||||||||||||||||||||||||||||||||  ||||||| |||| ||||||||||  ||||||||    
T  14902078 acacacaagcacatataaacacatattaaaacaattaataaaataaatctagcgaaaatcgagctgttacaa 14902149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 30231900 - 30231832
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||  |||||||| | |||||||    
T  30231900 acacacaagcacatataaacacataataaaacaattaaaaataaatctagtgaaaatcggactgttaca 30231832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 49072515 - 49072570
Alignment:
Q  4 cacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||| |||||||||||||||||||||||||||||||| |||| |||||||||    
T  49072515 cacaagcagatataaacacatattaaaacaattaaaaataaatctagcgaaaatcg 49072570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 40904358 - 40904301
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||    
T  40904358 acacacaagcacataaaaacacatattaaaacaatt-aaaataattctatcgaaaatcg 40904301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 50219396 - 50219339
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||    
T  50219396 acacacaagcacatataaacacgtattaaaacaatt-aaaataattctagcgaaaatcg 50219339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 27961825 - 27961881
Alignment:
Q  3 acacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||| | |||||||    
T  27961825 acacaagcacatataaacacataataaaacaattaaaaataaatctagcaaaaatcg 27961881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 37956424 - 37956376
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattcta 49  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  37956424 acacacaagcacatataaacacgtattaaaacaattaaaaataaatcta 37956376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 13438459 - 13438402
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||| || |||||||||||||||||||| |||||||||||| |||||||||    
T  13438459 acacacaagcacttaaaaacacatattaaaacaatt-aaaataattctagcgaaaatcg 13438402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 19560183 - 19560240
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||| |||||||||||| |||||||||||||||||||||||| |||| |||||||||    
T  19560183 acacacgagcacatataaatacatattaaaacaattaaaaataa-tctagcgaaaatcg 19560240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 31635438 - 31635380
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||| ||||||||| | ||||| ||||||||||||||||||| |||||||    
T  31635438 acacacaagcacaaataaacacacaataaaataattaaaaataattctaacaaaaatcg 31635380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18235650 - 18235610
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaa 41  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  18235650 acacacaagcacatataaacacgtattaaaacaattaaaaa 18235610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 18493512 - 18493453
Alignment:
Q  1 acacacaagcacatataaacacatattaaaa-caattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||||||||||||| |||||  |||||||||||| |||| |||||||||    
T  18493512 acacacaagcacatataaacacataataaaagtaattaaaaataaatctagcgaaaatcg 18493453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 41255765 - 41255715
Alignment:
Q  8 agcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||||||||||    
T  41255765 agcacata-aaacacatatttaaacaattaaaaataaatctaacgaaaatcg 41255715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 54399179 - 54399240
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaatt---aaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||| |||||||| |||||||||||   ||||||||||||| |||||||||    
T  54399179 acacacaagcacataaaaacacatgttaaaacaattaaaaaaaataattctagcgaaaatcg 54399240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 15045678 - 15045736
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||| ||||||| ||| ||||| |||||||||||| |||| |||||||||    
T  15045678 acacacaagcacaaataaacatataataaaataattaaaaataaatctatcgaaaatcg 15045736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 15108746 - 15108688
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||| ||||||| ||| ||||| |||||||||||| |||| |||||||||    
T  15108746 acacacaagcacaaataaacatataataaaataattaaaaataaatctatcgaaaatcg 15108688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13808908 - 13808852
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatc 58  Q
    ||||||||||||||||| ||||||| ||||||||||||||| |||| || ||||||||    
T  13808908 acacacaagcacatatatacacataataaaacaattaaaaa-aattgtatcgaaaatc 13808852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 36990284 - 36990340
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatc 58  Q
    ||||||||||||||| ||| |||||||||||||||| ||||| |||||| ||||||||    
T  36990284 acacacaagcacataaaaatacatattaaaacaatt-aaaattattctagcgaaaatc 36990340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 10236720 - 10236665
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaat 57  Q
    ||||| ||||| | |||||||||||||||||||||| ||||||| ||||||||||||    
T  10236720 acacataagcataaataaacacatattaaaacaatt-aaaataaatctaacgaaaat 10236665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 12133032 - 12132996
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaatta 37  Q
    ||||||||||||||||||||||||||||||| |||||    
T  12133032 acacacaagcacatataaacacatattaaaataatta 12132996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 15012676 - 15012632
Alignment:
Q  15 ataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||| ||||||| |||||||||||||||| ||||||||||||||    
T  15012676 ataaaaacatatttaaacaattaaaaataaatctaacgaaaatcg 15012632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 12244309 - 12244253
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||| |||||||||   ||||| |||||||||||| ||||||||||||||    
T  12244309 acacacaagcacaaataaacacaa--taaaataattaaaaataaatctaacgaaaatcg 12244253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 19821170 - 19821124
Alignment:
Q  8 agcacatataaacacatattaaaacaattaaaaataattctaacgaaa 55  Q
    ||||||||||||||| ||| |||| |||||||||||||||||||||||    
T  19821170 agcacatataaacacgtat-aaaataattaaaaataattctaacgaaa 19821124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 18277232 - 18277286
Alignment:
Q  5 acaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||| ||| ||||||||||| |||||||||||||||||| |||| | |||||||    
T  18277232 acaagtacaaataaacacataataaaacaattaaaaataaatctagcaaaaatcg 18277286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 5e-25; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 33537764 - 33537686
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttacaaaaaccatct 79  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||| || |||||    
T  33537764 acacacaagcacatataaacacatattaaaacaattaaaaataaatctagcgaaaatcgaactgttacaataaacatct 33537686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 22461546 - 22461477
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttacaa 70  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||  |||||||||    
T  22461546 acacacaagcacatataaacacatattaaaacgattaaaaataattctagcgaaaatcgggttgttacaa 22461477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 17082576 - 17082518
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  17082576 acacacaagcacatataaacacatattaaaacaattaaaaataaatctagcgaaaatcg 17082518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 18506781 - 18506716
Alignment:
Q  4 cacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||  ||||||||    
T  18506781 cacaagcacatataaacacatattaaaacaattaaaaataaatctagcgaaaatcgggttgttaca 18506716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 22848864 - 22848917
Alignment:
Q  4 cacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaat 57  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22848864 cacaagcacatataaacacatattaaaacaattaaaaataaatctaacgaaaat 22848917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 15889165 - 15889097
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    |||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  15889165 acacacgagcatatatacacacatattaaaacaattaaaaataattctaacgaaaatcgggttgttaca 15889097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 23223577 - 23223633
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaat 57  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23223577 acacccaaacacatataaacacatattaaaacaattaaaaataattctaacgaaaat 23223633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 116504 - 116445
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcga 60  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||    
T  116504 acacacaagcacgtataaacacgtattaaaacaattaaaaataattctagcgaaaatcga 116445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 21932032 - 21932090
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||    
T  21932032 acacacaagcacatataaacacatattaaaacaattaaaaataaatctagcaaaaatcg 21932090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 25654984 - 25655042
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||    
T  25654984 acacacaagcacatataaacacatattaaaacaattaaaaataaatctagcaaaaatcg 25655042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 32352821 - 32352879
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||| | || |||||||||    
T  32352821 acacacaagcacatataaacacatattaaaacaattaaaaataaatatagcgaaaatcg 32352879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15004341 - 15004293
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattcta 49  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15004341 acacacaagcacatataaacacatattaaaacaattaaaaataaatcta 15004293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17547106 - 17547050
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaat 57  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||    
T  17547106 acacacaagcacatataagcacatattaaaacaattaaaaataaatctagcgaaaat 17547050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 15079144 - 15079086
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||||||||| |||||| |||||||||||||||||| |||| |||||||||    
T  15079144 acacacaagcacatataaccacataataaaacaattaaaaataaatctagcgaaaatcg 15079086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18628984 - 18628944
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  18628984 acacacaagcacatataaacacatattaaaacaattaaaaa 18628944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 35135404 - 35135352
Alignment:
Q  7 aagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||||||| |||||||| ||||||||| ||||||||||||||    
T  35135404 aagcacatataaacacataataaaacaaataaaaataaatctaacgaaaatcg 35135352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 29157890 - 29157848
Alignment:
Q  17 aaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  29157890 aaacacatattaaaacaattaaaaataattctagcgaaaatcg 29157848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 33325548 - 33325610
Alignment:
Q  7 aagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    ||||||||||||||||||| |||||||| ||||||||| |||| |||||||||  ||||||||    
T  33325548 aagcacatataaacacataataaaacaaataaaaataaatctagcgaaaatcgggttgttaca 33325610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 22582192 - 22582138
Alignment:
Q  5 acaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||| ||||||||||||||| |||||| ||||| |||| |||||||||    
T  22582192 acaagcacataaaaacacatattaaaagaattaagaataaatctagcgaaaatcg 22582138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 22584982 - 22584928
Alignment:
Q  5 acaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||| ||||||||||||||| |||||| ||||| |||| |||||||||    
T  22584982 acaagcacataaaaacacatattaaaagaattaagaataaatctagcgaaaatcg 22584928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 22589813 - 22589759
Alignment:
Q  5 acaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||| ||||||||||||||| |||||| ||||| |||| |||||||||    
T  22589813 acaagcacataaaaacacatattaaaagaattaagaataaatctagcgaaaatcg 22589759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 34967675 - 34967729
Alignment:
Q  20 cacatattaaaacaattaaaaataattctaacgaaaatcgaattgttacaaaaac 74  Q
    ||||||||||||||||| |||||||||||| |||||||||   ||||||||||||    
T  34967675 cacatattaaaacaattgaaaataattctagcgaaaatcggcctgttacaaaaac 34967729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 25920430 - 25920486
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatc 58  Q
    ||||||||||||||| ||| |||||| |||  ||||||||||||||||||||||||||    
T  25920430 acacacaagcacataaaaatacatat-aaactaattaaaaataattctaacgaaaatc 25920486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 19171394 - 19171434
Alignment:
Q  17 aaacacatattaaaacaattaaaaataattctaacgaaaat 57  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  19171394 aaacacatattaaaacaattaaaaataaatctagcgaaaat 19171434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 31466976 - 31466925
Alignment:
Q  17 aaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    |||||||||||||| ||||||||||||| |||||||||||||| | |||||||    
T  31466976 aaacacatattaaa-caattaaaaataaatctaacgaaaatcggactgttaca 31466925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 14153104 - 14153158
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaa 56  Q
    ||||||||||| ||| |||||| ||||||| ||||||||||||| |||||||||||    
T  14153104 acacacaagcatataaaaacacttattaaa-caattaaaaataaatctaacgaaaa 14153158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 29606232 - 29606302
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaatt-aaaaataattctaacgaaaatcgaattgttacaa 70  Q
    |||||||| || ||| |||||||||||||| ||||| |||||||| ||||||||||| ||  |||||||||    
T  29606232 acacacaaacatataaaaacacatattaaagcaattaaaaaataaatctaacgaaaaacgggttgttacaa 29606302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 14672278 - 14672343
Alignment:
Q  5 acaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttacaa 70  Q
    ||||||||||||||| |||||| ||||  | | ||||||| ||||||||||||||  |||||||||    
T  14672278 acaagcacatataaatacatataaaaattaattaaaataaatctaacgaaaatcgggttgttacaa 14672343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14128954 - 14129001
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattcta 49  Q
    ||||||||||| ||| ||||||||||| |||||||||||||||| ||||    
T  14128954 acacacaagcatatagaaacacatatt-aaacaattaaaaataaatcta 14129001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 21265738 - 21265786
Alignment:
Q  11 acatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||| ||||||| | |||||||||||||||||| |||| |||||||||    
T  21265738 acataaaaacacacaataaaacaattaaaaataactctagcgaaaatcg 21265786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 21410443 - 21410391
Alignment:
Q  7 aagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||| ||||||||||| ||||| |||||||||||| ||||  ||||||||    
T  21410443 aagcacaaataaacacataataaaagaattaaaaataaatctattgaaaatcg 21410391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 22578452 - 22578507
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaat 57  Q
    ||||| ||||||| ||||||||| || |||| |||||||||||| ||||||||||||    
T  22578452 acacataagcacaaataaacaca-ataaaaataattaaaaataaatctaacgaaaat 22578507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 23233960 - 23233905
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaa 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23233960 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaa 23233905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 6457450 - 6457517
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  6457450 acacacaagcacata-aaacacatattaaaacaattaaaaataattctaacgaaaatcgggttgttaca 6457517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 11966128 - 11966196
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| | |||||||    
T  11966128 acacacaagcacatataaacacatattaaaacaattaaaaataattctagtgaaaatcggactgttaca 11966196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 5621216 - 5621150
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgtta 67  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||    
T  5621216 acacagaagcacatataaacacatattaaaacaattaaaaataaatctaacaaaaatcaaattgtta 5621150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 3674736 - 3674804
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||| | |||||||    
T  3674736 acacacaagcacatataaacacataataaaacaattaaaaataaatctagcgaaaatcggactgttaca 3674804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 23467307 - 23467363
Alignment:
Q  3 acacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  23467307 acacaagcacatataaacacataataaaacaattaaaaataaatctaacgaaaatcg 23467363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 23418093 - 23418151
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || | |||||||    
T  23418093 acacacaagcacatataaacacatattaaaacaattaaaaataattttagcaaaaatcg 23418151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 21215864 - 21215810
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaa 55  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||| |||||    
T  21215864 acacacaagcacataaaaacacatattaaaacaattaaaaataaatctagcgaaa 21215810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 37984217 - 37984275
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||| ||||||||||||||||||||| |||||||||||||||| |||| |||||||||    
T  37984217 acacataagcacatataaacacatatttaaacaattaaaaataaatctagcgaaaatcg 37984275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 16834747 - 16834691
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatc 58  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||    
T  16834747 acacacaagcacatataa-cacatattaaaacaattaaaaatatttctagcgaaaatc 16834691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 26559251 - 26559179
Alignment:
Q  1 acacacaagcacatataaacacatat--taaaacaattaaaaataattctaacgaaaatcgaattgttacaaa 71  Q
    ||||||||||||||||||||||||||  |||||||||||||||||| |||| ||||||||  | |||||||||    
T  26559251 acacacaagcacatataaacacatatattaaaacaattaaaaataaatctagcgaaaatcagactgttacaaa 26559179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 19349885 - 19349953
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    |||||||||||||||||||| |||| |||||||||| ||||||| |||| ||||||||||  |||||||    
T  19349885 acacacaagcacatataaactcataataaaacaattcaaaataaatctagcgaaaatcgagctgttaca 19349953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 19874555 - 19874611
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaat 57  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||| | |||||||    
T  19874555 acacacaaacacatataaacacatattaaaataattaaaaataattccagcgaaaat 19874611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 32965113 - 32965057
Alignment:
Q  3 acacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||| ||||||||||||| ||||||||||||||||||||| |||||| |||||||    
T  32965113 acacaaacacatataaacacttattaaaacaattaaaaataaatctaacaaaaatcg 32965057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 21110570 - 21110627
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  21110570 acacacaag-acatataaacacataataaaacaattaaaaataaatctagcgaaaatcg 21110627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 21222064 - 21222006
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||| ||||||||| | ||||| ||||||||||||||||||| |||||||    
T  21222064 acacacaagcacaaataaacacacaataaaataattaaaaataattctaacaaaaatcg 21222006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 11762923 - 11762868
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaat 57  Q
    ||||||||||||||| |||||||||||||||||||| ||||||| |||| |||||||    
T  11762923 acacacaagcacatagaaacacatattaaaacaatt-aaaataaatctagcgaaaat 11762868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 16596343 - 16596411
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    |||||||| ||||||||||||| |||||||||| |||||||||| |||| | ||||||| | |||||||    
T  16596343 acacacaaacacatataaacacgtattaaaacagttaaaaataaatctagcaaaaatcggactgttaca 16596411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 22662085 - 22662045
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaa 41  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  22662085 acacacaagcacatataaacacataataaaacaattaaaaa 22662045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 22886417 - 22886468
Alignment:
Q  5 acaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaat 57  Q
    ||||||||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  22886417 acaagcacata-aaacacatattaaaaccattaaaaataaatctaacgaaaat 22886468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 296
Target Start/End: Original strand, 5065963 - 5066018
Alignment:
Q  241 tgaggtgatgaattttgtctacaaagttcatcaccataagctttgagagcttgttt 296  Q
    |||||||||||| |||||||||||||||| ||||||||| |||||  |||||||||    
T  5065963 tgaggtgatgaagtttgtctacaaagttcctcaccataacctttggtagcttgttt 5066018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 433304 - 433361
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||||||||| ||| || |||||||||||||||||| |||| |||||||||    
T  433304 acacacaagcacatataa-cacgtaataaaacaattaaaaataaatctagcgaaaatcg 433361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 3420426 - 3420368
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||| ||  ||||||||||||||||||||||||||||||| ||||  ||||||||    
T  3420426 acacacaaacatgtataaacacatattaaaacaattaaaaataaatctagtgaaaatcg 3420368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 5450214 - 5450157
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||||||||||||| |||||||||| || |||| |||||| |||||||    
T  5450214 acacacaagcacatataaacacataataaaacaatt-aagataaatctaacaaaaatcg 5450157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 24224801 - 24224743
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||| ||||||||| | ||||| |||| ||||||||||||| ||||||||    
T  24224801 acacacaagcacaaataaacacacaataaaataattgaaaataattctaatgaaaatcg 24224743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 7729293 - 7729349
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaat 57  Q
    ||||||||||||| ||||||||| | ||||| |||||||||||| |||| |||||||    
T  7729293 acacacaagcacaaataaacacacaataaaataattaaaaataaatctagcgaaaat 7729349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 24084689 - 24084743
Alignment:
Q  4 cacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||||||||||||| ||||| |||| ||||||| |||| |||||||||    
T  24084689 cacaagcacatataaacacataataaaataatt-aaaataaatctagcgaaaatcg 24084743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 2032655 - 2032706
Alignment:
Q  6 caagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||| ||||||| |||| ||||||||||||||||||| |||||||    
T  2032655 caagcacatataa-cacatat-aaaataattaaaaataattctaacaaaaatcg 2032706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 9723254 - 9723196
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9723254 acacacaagcacatataaacacatattaaaacaattaaaaataattctagcgaaaatcg 9723196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 45146184 - 45146253
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttacaa 70  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| | ||||||    
T  45146184 acacacaagcacatataaacacatattaaaacaattaaaaataaatctagcgaaaatcgaactattacaa 45146253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 33560467 - 33560525
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  33560467 acacacaagcacatataaacacatattaaaacaattaaaaataaatctagcgaaaatcg 33560525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 21675175 - 21675119
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaat 57  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  21675175 acacacaagcacatataaacacacattaaaacaattaaaaataattctagcgaaaat 21675119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 14268301 - 14268242
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaatta-aaaataattctaacgaaaatcg 59  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  14268301 acacacaagcacatataaacacatattaaaacaattaaaaaataaatctaacgaaaatcg 14268242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 9251259 - 9251317
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||    
T  9251259 acacacaagcacataaaaacatatattaaaacaattaaaaataattctagcgaaaatcg 9251317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 31502017 - 31502084
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||  ||||||||    
T  31502017 acacacaagcacata-aaacacatattaaaacaattaaaaataaatctagcgaaaatcgggttgttaca 31502084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 46474766 - 46474834
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||| || |||||||| || |||||||    
T  46474766 acacacaagcacatataaacacatgttaaaacaactaaaaataattatagcgaaaatcaaagtgttaca 46474834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 45150386 - 45150441
Alignment:
Q  4 cacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  45150386 cacaaacacatataaacacatattaaaacaattaaaaataaatctagcgaaaatcg 45150441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 9318990 - 9318932
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||| | |||||||    
T  9318990 acacacaagcacataaaaacatatattaaaacaattaaaaataattctagctaaaatcg 9318932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 9612161 - 9612219
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||| ||||||||||| |||| ||||||||||||| ||||||||||||||    
T  9612161 acacacaagcacaaataaacacataataaagcaattaaaaataaatctaacgaaaatcg 9612219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 9839732 - 9839790
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||| ||||||||||| |||| ||||||||||||| ||||||||||||||    
T  9839732 acacacaagcacaaataaacacataataaagcaattaaaaataaatctaacgaaaatcg 9839790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 20583008 - 20582950
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||| |||| ||||    
T  20583008 acacacaagcacataaaaacacatattaaaacaattaaaaataaatctagcgaatatcg 20582950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 13275626 - 13275694
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    |||||||||||||||||||||||||   |||||||||||||||| |||| ||||||||||  |||||||    
T  13275626 acacacaagcacatataaacacataaataaacaattaaaaataaatctagcgaaaatcgagctgttaca 13275694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 13448250 - 13448183
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    ||||||||||||||| |||||||||||||||||||| |||||||| | |||||||||||  ||||||||    
T  13448250 acacacaagcacataaaaacacatattaaaacaatt-aaaataatccaaacgaaaatcgggttgttaca 13448183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 16914377 - 16914313
Alignment:
Q  5 acaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    ||||||||| ||||||||||| |||||||||||||||||| |||| |||||||||  ||||||||    
T  16914377 acaagcacaaataaacacataataaaacaattaaaaataaatctagcgaaaatcggtttgttaca 16914313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 34240600 - 34240545
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaat 57  Q
    |||||||||||||||||||||||||||||||||||| |||||||  |||||||||||    
T  34240600 acacacaagcacatataaacacatattaaaacaatt-aaaataaaactaacgaaaat 34240545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 13352781 - 13352836
Alignment:
Q  4 cacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||||||||| |||||||||||||||||||||| |||| | |||||||    
T  13352781 cacaagcacatataaacaaatattaaaacaattaaaaataaatctagcaaaaatcg 13352836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 39285626 - 39285560
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttac 68  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||| | ||||||||| | ||||||    
T  39285626 acacacaagcacatataa-cacatattaaaacaattaaaaatatttccagcgaaaatcggactgttac 39285560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 18078933 - 18078877
Alignment:
Q  15 ataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttacaaa 71  Q
    ||||||||| || |||||||||||||||||||||| ||||||||||  |||||||||    
T  18078933 ataaacacacataaaaacaattaaaaataattctagcgaaaatcgagctgttacaaa 18078877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 28392524 - 28392591
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    ||||||||||||||| ||| ||||||||||||||||  ||||||||||| ||||||||| | |||||||    
T  28392524 acacacaagcacataaaaatacatattaaaacaatt-gaaataattctagcgaaaatcggactgttaca 28392591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 49047073 - 49047033
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaa 41  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  49047073 acacacaagcacatataaacacataataaaacaattaaaaa 49047033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 48357438 - 48357493
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaa 56  Q
    ||||||||||||| ||||||||||| |||||| ||||||||||| |||| ||||||    
T  48357438 acacacaagcacaaataaacacataataaaacgattaaaaataaatctagcgaaaa 48357493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 6321730 - 6321787
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatc 58  Q
    ||||||||||||||| ||| ||||| ||||| ||| |||||||| |||||||||||||    
T  6321730 acacacaagcacataaaaatacataataaaataatcaaaaataaatctaacgaaaatc 6321787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 38424940 - 38424994
Alignment:
Q  5 acaagcacatataaacacatattaaaacaatt-aaaaataattctaacgaaaatcg 59  Q
    ||||||||||| || ||||||||||||||||| |||||||| ||||||||||||||    
T  38424940 acaagcacata-aagcacatattaaaacaattaaaaaataaatctaacgaaaatcg 38424994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 14935975 - 14936031
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||| |||||| |||||||||||||||||||| ||||||| |||| |||||||||    
T  14935975 acacacaaacacata-aaacacatattaaaacaatt-aaaataaatctagcgaaaatcg 14936031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 15363568 - 15363624
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||| |||||| |||||||||||||||||||| ||||||| |||| |||||||||    
T  15363568 acacacaaacacata-aaacacatattaaaacaatt-aaaataaatctagcgaaaatcg 15363624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 16920357 - 16920415
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||| ||||||| ||||||||| | ||||| ||||||||||||||  |||||||||||    
T  16920357 acacataagcacaaataaacacacaataaaataattaaaaataatttaaacgaaaatcg 16920415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 28722902 - 28722960
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaatt-aaaaataattctaacgaaaatc 58  Q
    |||||||| |||||| ||||||||| |||||||||| |||||||| |||||| ||||||    
T  28722902 acacacaaacacataaaaacacataataaaacaattaaaaaataaatctaacaaaaatc 28722960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 10331949 - 10331898
Alignment:
Q  5 acaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatc 58  Q
    ||||||||||| |||||||||||||||| ||| |||||||||||| ||||||||    
T  10331949 acaagcacata-aaacacatattaaaaccatt-aaaataattctagcgaaaatc 10331898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17223446 - 17223390
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatc 58  Q
    ||||||||||||| ||||||||| | ||||| |||| |||||||||||||| ||||||    
T  17223446 acacacaagcacaaataaacacacaataaaataatt-aaaataattctaacaaaaatc 17223390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 17923321 - 17923365
Alignment:
Q  15 ataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||| |||||||||||||||| ||| |||| |||||||||    
T  17923321 ataaacacacattaaaacaattaaaattaaatctagcgaaaatcg 17923365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 67412 - 67343
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttacaa 70  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| | ||||||||    
T  67412 acacacaagcacatataaacacatattaaaacaattaaaaataaatctagcgaaaatcggactgttacaa 67343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 132658 - 132715
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||| | |||||||    
T  132658 acacacaagcacataaaaacacatattaaaacaatt-aaaataattctagcaaaaatcg 132715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 5e-22; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 38375119 - 38375062
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatc 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  38375119 acacacaagcacatataaacacatattaaaacaattaaaaataattctagcgaaaatc 38375062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 31411090 - 31411022
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||  |||||||||    
T  31411090 acacacaagcacatataaacacatattaaaacaattaaaaataattctagcaaaaatctgattgttaca 31411022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 39657394 - 39657462
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||  ||||||||    
T  39657394 acacacaagcacatataaacacatattaaaacaattaaaaataaatctagcgaaaatcgggttgttaca 39657462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 17758120 - 17758062
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  17758120 acacacaagcacatataaacacatattaaaacaattaaaaataattctagcaaaaatcg 17758062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 19059440 - 19059382
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  19059440 acacacaagcacatataaacacatattaaaacaattaaaaataattctagcaaaaatcg 19059382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 21166503 - 21166437
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgtta 67  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||    
T  21166503 acacagaagcacatataaacacatattaaaacaattaaaaataaatctaacaaaaatcaaattgtta 21166437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 38810387 - 38810315
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttacaaaaa 73  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||   |||||||||||    
T  38810387 acacacaagcatatataaacacataataaaacaattaaaaataaatctaacgaaaatcgggctgttacaaaaa 38810315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 33368384 - 33368317
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttac 68  Q
    ||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||  |||||||    
T  33368384 acacacaagcacaaataaacacataataaaacaattaaaaataaatctaacgaaaatcgggttgttac 33368317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 17586330 - 17586273
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  17586330 acacacaagcacata-aaacacatattaaaacaattaaaaataattctagcgaaaatcg 17586273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 40939996 - 40940054
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||  ||||||||    
T  40939996 acacacaagcacatataaacacataataaaacaattaaaaataaatctagtgaaaatcg 40940054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 43426963 - 43426906
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  43426963 acacgcaagcacatataaacacatattaaa-caattaaaaataattctagcgaaaatcg 43426906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13300846 - 13300789
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatc 58  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||| | ||||||    
T  13300846 acacacaagcacatgtaaacacatattaaaacaattaaaaataaatctagcaaaaatc 13300789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9150164 - 9150204
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  9150164 acacacaagcacatataaacacatattaaaacaattaaaaa 9150204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13311502 - 13311454
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattcta 49  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  13311502 acacacaagcacatgtaaacacatattaaaacaattaaaaataaatcta 13311454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 14081352 - 14081404
Alignment:
Q  7 aagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  14081352 aagcacatataaacacataataaaacaattaaaaataaatctagcgaaaatcg 14081404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 25103413 - 25103346
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    ||||||||||||||| |||||||||||||||||||| ||||||| |||| ||||||||| | |||||||    
T  25103413 acacacaagcacataaaaacacatattaaaacaatt-aaaataaatctagcgaaaatcggactgttaca 25103346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 34560649 - 34560717
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    |||| |||||||||| ||||||||| |||||||||||||||||| |||||| |||||||  ||||||||    
T  34560649 acactcaagcacataaaaacacataataaaacaattaaaaataaatctaacaaaaatcgggttgttaca 34560717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8605668 - 8605724
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatc 58  Q
    ||||||||||||||| |||||||||||||||||||| ||||||| |||| ||||||||    
T  8605668 acacacaagcacataaaaacacatattaaaacaatt-aaaataaatctagcgaaaatc 8605724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 8632627 - 8632695
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttacaa 70  Q
    ||||||||| ||| |||||||||||| ||||||||| ||||||| ||||||||||||||  |||||||||    
T  8632627 acacacaagtacaaataaacacatataaaaacaatt-aaaataaatctaacgaaaatcgggttgttacaa 8632695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10913709 - 10913754
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataatt 46  Q
    ||||||||||| || |||||||||||||||||||||||||||||||    
T  10913709 acacacaagcatatgtaaacacatattaaaacaattaaaaataatt 10913754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 11060378 - 11060326
Alignment:
Q  7 aagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||||||| |||||||||||||||||| ||||  ||||||||    
T  11060378 aagcacatataaacacataataaaacaattaaaaataaatctagtgaaaatcg 11060326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 11514930 - 11514863
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    |||||||| |||||||||| | |||||||||||||||||||||| ||||| |||||||| | |||||||    
T  11514930 acacacaaacacatataaatatatattaaaacaattaaaaataa-tctaatgaaaatcggactgttaca 11514863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 14058617 - 14058549
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    ||||||||||||||| ||||||||| | | ||||||||||||||||| | |||||||||  ||||||||    
T  14058617 acacacaagcacataaaaacacataatgacacaattaaaaataattccagcgaaaatcgggttgttaca 14058549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17192361 - 17192417
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaat 57  Q
    |||||||| |||| ||||||||| | ||||| |||||||||||||||||||||||||    
T  17192361 acacacaaccacaaataaacacacaataaaataattaaaaataattctaacgaaaat 17192417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 20421669 - 20421733
Alignment:
Q  5 acaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    |||||||||||||||||||||| ||||  | | ||||||| |||||||||||||| |||||||||    
T  20421669 acaagcacatataaacacatataaaaattaattaaaataaatctaacgaaaatcggattgttaca 20421733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 12487175 - 12487116
Alignment:
Q  1 acacacaagcacatataaacacat-attaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||||||||||||||| || ||||||||||||||||| |||| | |||||||    
T  12487175 acacacaagcacatataaacacataataaaaacaattaaaaataaatctagcaaaaatcg 12487116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 17140360 - 17140403
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataa 44  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||    
T  17140360 acacacaagcaaatataaacacataataaaacaattaaaaataa 17140403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 18970739 - 18970797
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaatt-aaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||| |||||||||||||||||||| |||||||| |||| |||||||||    
T  18970739 acacacaagcacata-aaacacatattaaaacaattaaaaaataaatctagcgaaaatcg 18970797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 50111448 - 50111409
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaa 40  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  50111448 acacacaagcacatataaacacataataaaacaattaaaa 50111409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 12032334 - 12032392
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||| ||| | ||||||| | ||||| |||||||||||||||||||||||||||    
T  12032334 acacacaagaacaaaaaaacacacaataaaataattaaaaataattctaacgaaaatcg 12032392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15521813 - 15521871
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaatt-aaaaataattctaacgaaaatc 58  Q
    ||||||||||||| |||||| ||||||||||||||| |||||||| |||| ||||||||    
T  15521813 acacacaagcacaaataaacgcatattaaaacaattaaaaaataaatctagcgaaaatc 15521871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 17205494 - 17205552
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||| ||||||| | | ||||| ||||||||| |||||||||||||||||    
T  17205494 acacacaagcacaaataaacatacaataaaataattaaaaacaattctaacgaaaatcg 17205552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 47784137 - 47784080
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||||||||| ||| || |||||||||||||||||| |||| |||||||||    
T  47784137 acacacaagcacatataa-cacgtaataaaacaattaaaaataaatctagcgaaaatcg 47784080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 18747943 - 18747996
Alignment:
Q  7 aagcacatataaacacatattaaaacaatt-aaaaataattctaacgaaaatcg 59  Q
    |||||||||| ||||| ||||||||||||| |||||||| ||||||||||||||    
T  18747943 aagcacatatcaacacgtattaaaacaattaaaaaataaatctaacgaaaatcg 18747996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 12530903 - 12530848
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaat 57  Q
    ||||||||||||||||||||| ||||||||||| || ||||||| |||||| |||||    
T  12530903 acacacaagcacatataaacatatattaaaacagtt-aaaataaatctaacaaaaat 12530848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 9590135 - 9590096
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaa 40  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  9590135 acacacaagcacatgtaaacacatattaaaataattaaaa 9590096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 16880981 - 16881040
Alignment:
Q  1 acacacaagcacatataaacacatattaaaac-aattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||| ||||||||| | |||||  |||||||||||| ||||||||||||||    
T  16880981 acacacaagcacaaataaacacacaataaaaataattaaaaataaatctaacgaaaatcg 16881040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 40038353 - 40038295
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||| ||||| ||||||||||||||| |||| ||| | || |||||||||    
T  40038353 acacacaagcacacataaatacatattaaaacaatcaaaattaaatttagcgaaaatcg 40038295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 6713261 - 6713204
Alignment:
Q  13 atataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttacaa 70  Q
    |||||||||||||| ||||||||||||||||| | || || ||||||  |||||||||    
T  6713261 atataaacacatatcaaaacaattaaaaataaatttagcggaaatcgggttgttacaa 6713204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 30208054 - 30208090
Alignment:
Q  7 aagcacatataaacacatattaaaacaattaaaaataa 44  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  30208054 aagcacatataaacacata-taaaacaattaaaaataa 30208090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 55193514 - 55193563
Alignment:
Q  10 cacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||||||| |||||| ||||||||||| |||  |||||||||    
T  55193514 cacatataaacacataataaaacgattaaaaataaatcttgcgaaaatcg 55193563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 4161641 - 4161590
Alignment:
Q  7 aagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||| ||| |||||||||||||||||||| ||||||| |||| |||||||||    
T  4161641 aagcatataaaaacacatattaaaacaatt-aaaataaatctagcgaaaatcg 4161590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 11328357 - 11328289
Alignment:
Q  5 acaagcacatataaacacatattaaaac-aattaaaaataattctaacgaaaatcgaattgttacaaaa 72  Q
    ||||||||| ||||||||| | |||||  |||||||||||| |||| |||||||||  |||||||||||    
T  11328357 acaagcacaaataaacacacaataaaaataattaaaaataaatctagcgaaaatcgggttgttacaaaa 11328289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 11832328 - 11832264
Alignment:
Q  5 acaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    ||||||||||||||||| | || ||||  | | |||||||||||| ||||||||| |||||||||    
T  11832328 acaagcacatataaacatacataaaaattaattaaaataattctagcgaaaatcggattgttaca 11832264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 48422422 - 48422489
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    |||||||||||||  |||||||| | ||||| |||| ||||||| ||||||||||||||  ||||||||    
T  48422422 acacacaagcacagttaaacacacaataaaataatt-aaaataaatctaacgaaaatcgggttgttaca 48422489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 24278583 - 24278651
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  24278583 acacacaagtacataaaaacacatattaaaacaattaaaaataattcaagcgaaaatcgaattgttaca 24278651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 9638227 - 9638285
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||    
T  9638227 acacacaagtacatataaacacatattaaaacaattaaaaataattttagcgaaaatcg 9638285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 19433206 - 19433137
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttacaa 70  Q
    |||||||||||| ||||| |||||| |||||||||||||||||| |||| ||||||||||| ||||||||    
T  19433206 acacacaagcacctataagcacataataaaacaattaaaaataaatctagcgaaaatcgaactgttacaa 19433137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 68843 - 68911
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    |||||||||||||| |||||||||| |||||||||||||||||| |||| |||||||||  ||||||||    
T  68843 acacacaagcacatttaaacacataataaaacaattaaaaataaatctagcgaaaatcgggttgttaca 68911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 6095479 - 6095534
Alignment:
Q  4 cacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  6095479 cacaaacacatataaacacatattaaaacaatttaaaataattctagcgaaaatcg 6095534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 723238 - 723296
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||||||||||||| || |||||||||||||||||| |||| |||||||||    
T  723238 acacacaagcacatataaacacgtaataaaacaattaaaaataaatctagcgaaaatcg 723296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 19667397 - 19667455
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| |||| |||||||||    
T  19667397 acacacaagcacatataagcacatattaaaacaagtaaaaataaatctagcgaaaatcg 19667455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19660751 - 19660808
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatc 58  Q
    |||||||||||||||||||  ||||||||||||||||||||||| |||| ||||||||    
T  19660751 acacacaagcacatataaatgcatattaaaacaattaaaaataaatctagcgaaaatc 19660808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 43646710 - 43646766
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||||||||||||  |||||||||||||||||| |||| |||||||||    
T  43646710 acacacaagcacatataaacacat--taaaacaattaaaaataaatctagcgaaaatcg 43646766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 16292248 - 16292190
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||| |||||||| ||||||||||| ||||||| |||| |||||||||    
T  16292248 acacacaagcacataaaaacacatgttaaaacaattgaaaataaatctagcgaaaatcg 16292190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 22579278 - 22579238
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaa 41  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  22579278 acacacaagcacatataaacacataataaaacaattaaaaa 22579238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 16446598 - 16446668
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaa-ttaaaaataattctaacgaaaatcgaattgttacaaa 71  Q
    |||||||||||| |||||||||||| |||||||| |||||||||| |||| ||||||||| ||| |||||||    
T  16446598 acacacaagcacgtataaacacata-taaaacaatttaaaaataaatctagcgaaaatcggattattacaaa 16446668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 24841734 - 24841773
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaa 40  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  24841734 acacacaagcacataaaaacacatattaaaacaattaaaa 24841773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 24885526 - 24885572
Alignment:
Q  13 atataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||| |||||||||||||||||| |||| |||||||||    
T  24885526 atataaacacataataaaacaattaaaaataaatctagcgaaaatcg 24885572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 2155256 - 2155188
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    |||||||||||||  |||||||| | ||||| |||||||||||| ||||||||||| ||  ||||||||    
T  2155256 acacacaagcacaattaaacacagaataaaataattaaaaataaatctaacgaaaaacgggttgttaca 2155188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 25595856 - 25595899
Alignment:
Q  13 atataaacacatattaaaacaattaaaaataattctaacgaaaat 57  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  25595856 atataaacacatattaaaacaatt-aaaataattctagcgaaaat 25595899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 7322380 - 7322438
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcga 60  Q
    |||||||||||||||||| ||| || |||||||||||||| ||| |||| ||||||||||    
T  7322380 acacacaagcacatataa-cacgtaataaaacaattaaaattaaatctagcgaaaatcga 7322438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 11010508 - 11010562
Alignment:
Q  4 cacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||| ||||||||||||||||| || |||||||||||||| ||| |||||||||    
T  11010508 cacaagtacatataaacacatattgaa-caattaaaaataatcctagcgaaaatcg 11010562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 24086829 - 24086770
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaatt-aaaaataattctaacgaaaatcg 59  Q
    ||||||||||||| |||||| |||||||||| |||| |||||||| |||| |||||||||    
T  24086829 acacacaagcacaaataaacgcatattaaaataattaaaaaataaatctagcgaaaatcg 24086770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 24293901 - 24293862
Alignment:
Q  20 cacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  24293901 cacatataaaaacaattaaaaataaatctaacgaaaatcg 24293862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 14834 - 14891
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatc 58  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  14834 acacacaagcacatataaacacatattaaaacaattaaaaaaaattctagcgaaaatc 14891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 2370 - 2314
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaat 57  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  2370 acacacaaacacatataaacacatattaaaacaattaaaaataattctagcgaaaat 2314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 32793 - 32729
Alignment:
Q  5 acaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||| | |||||||    
T  32793 acaagcacatataaacacatattaaaacaattaaaaataaatctagcgaaaatcggactgttaca 32729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 32847 - 32791
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaat 57  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  32847 acacacaagcacatataaacacatattaaatcaattaaaaataattctaccgaaaat 32791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 5e-19; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 5767621 - 5767553
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||| | ||||||| |||||||||    
T  5767621 acacacaagcacatataaacacttattaaaacaatttaaaataattctagcaaaaatcggattgttaca 5767553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 33398142 - 33398200
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||    
T  33398142 acacacaagcacatatatacacatattaaaacaattaagaataattctagcgaaaatcg 33398200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 8537374 - 8537319
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatc 58  Q
    ||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||    
T  8537374 acacacaagcacatataaacacat--taaaacaattaaaaataaatctaacgaaaatc 8537319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 8602613 - 8602558
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatc 58  Q
    ||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||    
T  8602613 acacacaagcacatataaacacat--taaaacaattaaaaataaatctaacgaaaatc 8602558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 22828819 - 22828761
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||| |||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  22828819 acacacaaacacatataaacacataataaaacaattaaaaataaatctagcgaaaatcg 22828761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 36355666 - 36355608
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||||||||||||  ||||||||||||||||||||| |||| |||||||||    
T  36355666 acacacaagcacatataaacatgtattaaaacaattaaaaataaatctagcgaaaatcg 36355608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 19603966 - 19604031
Alignment:
Q  5 acaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttacaa 70  Q
    |||| |||||||||||||||| |||||||||||||||||| |||| ||||||||| | ||||||||    
T  19603966 acaatcacatataaacacataataaaacaattaaaaataaatctagcgaaaatcggactgttacaa 19604031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 16646789 - 16646853
Alignment:
Q  5 acaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||  |||||||| | |||||||    
T  16646789 acaagcacatataaacacatattaaaataattaaaaataaatctagggaaaatcggactgttaca 16646853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 20839186 - 20839243
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||| ||||||||||||||| |||| |||||||||||| |||||||||    
T  20839186 acacacaagcacataaaaacacatattaaaataatt-aaaataattctagcgaaaatcg 20839243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 25094682 - 25094739
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||| || |||||||||    
T  25094682 acacacaagcacaaataaacacatatt-aaacaattaaaaataattatagcgaaaatcg 25094739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 52401426 - 52401479
Alignment:
Q  4 cacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatc 58  Q
    |||||||||||| |||||||||| ||||||||||||||||| |||||||||||||    
T  52401426 cacaagcacata-aaacacatatcaaaacaattaaaaataaatctaacgaaaatc 52401479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5470417 - 5470360
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatc 58  Q
    ||||||||||||||| ||||| |||||||||||||||||||||| || | ||||||||    
T  5470417 acacacaagcacataaaaacatatattaaaacaattaaaaataactccagcgaaaatc 5470360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 17609724 - 17609781
Alignment:
Q  2 cacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||| ||||||||||| |||||||||||||||||| |||  |||||||||    
T  17609724 cacacaagcacaaataaacacataataaaacaattaaaaataaatctcgcgaaaatcg 17609781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 38033077 - 38033008
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttacaa 70  Q
    |||||||| ||||||||||||| || |||||||||||||||||| | || ||||||||| | ||||||||    
T  38033077 acacacaaacacatataaacacgtactaaaacaattaaaaataaatttagcgaaaatcggactgttacaa 38033008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 17023796 - 17023854
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||| || |||||| | ||||| ||||||||||| |||||||||||||||    
T  17023796 acacacaagcacaaatgaacacacaataaaataattaaaaatagttctaacgaaaatcg 17023854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 37233282 - 37233225
Alignment:
Q  2 cacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||| ||||||||| | | ||| |||||||||||||| ||||||||||||    
T  37233282 cacacaagcacaaataaacacacaattaaataattaaaaataattataacgaaaatcg 37233225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 49996682 - 49996626
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatc 58  Q
    ||||||||||||||| |||||||||||||||  | | |||||||||||||||||||||    
T  49996682 acacacaagcacata-aaacacatattaaaaataattaaaataattctaacgaaaatc 49996626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 20177976 - 20178028
Alignment:
Q  7 aagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||  |||||||| | ||||| |||||||||||||||||||||||||||    
T  20177976 aagcacaattaaacacacaataaaataattaaaaataattctaacgaaaatcg 20178028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 75841 - 75783
Alignment:
Q  1 acacacaagcacatataaacacatatt-aaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||| |||||| |||| ||||||||||||| |||||||||| |||||||    
T  75841 acacacaagcacatagaaacacgtatttaaaacaattaaaa-taattctaacaaaaatcg 75783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 22142730 - 22142691
Alignment:
Q  20 cacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||| |||||||||||||||||| ||||||||||||||    
T  22142730 cacataataaaacaattaaaaataaatctaacgaaaatcg 22142691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 18851840 - 18851787
Alignment:
Q  4 cacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatc 58  Q
    |||||| | ||||||||||||||| || |||||||||||||||||| ||||||||    
T  18851840 cacaagtatatataaacacatattgaa-caattaaaaataattctagcgaaaatc 18851787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 21195812 - 21195853
Alignment:
Q  18 aacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||| |||||||||||||||||| ||||||||| ||||    
T  21195812 aacacataataaaacaattaaaaataaatctaacgaatatcg 21195853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 9783470 - 9783415
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaat 57  Q
    ||||||||| ||| |||||||||||| ||||||||| ||||||| | ||||||||||    
T  9783470 acacacaagtacaaataaacacatataaaaacaatt-aaaataaatataacgaaaat 9783415  T

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Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 21424051 - 21424115
Alignment:
Q  5 acaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    ||||||||||||||||||| || | ||  | | |||||||||||| ||||||||||| |||||||    
T  21424051 acaagcacatataaacacacataataattaattaaaataattctagcgaaaatcgaactgttaca 21424115  T

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Target: scaffold1932 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold1932
Description:

Target: scaffold1932; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 800 - 743
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  800 acacacaagcacatataaacacatat-aaaacaattaaaaataattttaacgaaaatcg 743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 5394 - 5452
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  5394 acacacaagcacgtataaacacgtattaaaacaattaaaaataaatctaacgaaaatcg 5452  T

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Target: scaffold0130 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 26419 - 26338
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttacaaaaaccatctcctt 83  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||   ||||||||| |||| ||||||    
T  26419 acacacaagcacata-aaacacatattaaaacaattaaaaataaatctaacgagaatcgggctgttacaaataccacctcctt 26338  T

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Target: scaffold0057 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 6669 - 6735
Alignment:
Q  4 cacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttacaa 70  Q
    |||| |||||||||||||||||||||||||||||||||||| |||| |||||||||  |||||||||    
T  6669 cacaggcacatataaacacatattaaaacaattaaaaataaatctatcgaaaatcgggttgttacaa 6735  T

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Target: scaffold0058 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 69712 - 69643
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttacaa 70  Q
    |||||||||||||||||| |||||| ||||||||| |||||||| ||||  |||||||||||||||||||    
T  69712 acacacaagcacatataaccacataataaaacaatgaaaaataaatctagagaaaatcgaattgttacaa 69643  T

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Target: scaffold0025 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 86354 - 86410
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaat 57  Q
    ||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||    
T  86354 acacacaagcacataaaaacacataataaaacaattaaaaataaatctaacgaaaat 86410  T

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Target: scaffold1092 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1092
Description:

Target: scaffold1092; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 2568 - 2500
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttacaaa 71  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||| || ||||||||||| |||||||||    
T  2568 acacacaagcacatataaacacataataaaacaatt-aaaataatt-tagcgaaaatcgaactgttacaaa 2500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 7209 - 7267
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||| ||||||||| |||||||||||||||||| |||| |||||||||    
T  7209 acacacaagcacataaaaacacataataaaacaattaaaaataactctagcgaaaatcg 7267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 13139 - 13197
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||||||||||||| |||||||||||||| |||||| |||| |||||||||    
T  13139 acacacaagcacatataaacacgtattaaaacaattagaaataaatctagcgaaaatcg 13197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 196705 - 196647
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||| ||||||||||| |||||||||||||||||| |||| |||||||||    
T  196705 acacacaagcacaaataaacacataataaaacaattaaaaataaatctagcgaaaatcg 196647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 9488 - 9432
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaat 57  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| |||| |||||||    
T  9488 acacacaagcacatataaacacataataaaacaaataaaaataaatctagcgaaaat 9432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 12109 - 12057
Alignment:
Q  7 aagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||||||||||||    
T  12109 aagcacatatcaacacgtattaaaacaattaaaaataaatctaacgaaaatcg 12057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 180308 - 180256
Alignment:
Q  17 aaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    |||||||||||||||||||||||||||| |||| ||||||||||| |||||||    
T  180308 aaacacatattaaaacaattaaaaataaatctagcgaaaatcgaactgttaca 180256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 12048 - 11994
Alignment:
Q  4 cacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||||||| |||||||||||||||||||||||| |||| |||||||||    
T  12048 cacaagcacatataaagacatattaaaacaattaaaaataa-tctagcgaaaatcg 11994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 11746 - 11817
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttacaaaa 72  Q
    ||||||||||||||  ||||||||| |||||||||||||||||| |||| |||||||||   ||||||||||    
T  11746 acacacaagcacattcaaacacataataaaacaattaaaaataaatctagcgaaaatcgggctgttacaaaa 11817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 3320 - 3378
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||| ||||||||||| |||| ||||||||||||  ||||||||||||||    
T  3320 acacacaagcacaaataaacacataataaaccaattaaaaatagatctaacgaaaatcg 3378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 301 - 243
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||||| ||| |||| ||||||||||| |||||||||| |||||||||    
T  301 acacacaagcacatatatacaaatataaaaacaattaataataattctagcgaaaatcg 243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 382 - 324
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaatta-aaaataattctaacgaaaatc 58  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||| |||||||||||||    
T  382 acacaaaagcacatagaaacacatattaaaacaattaaaaaataaatctaacgaaaatc 324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 30784 - 30842
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||| |||||||||||||||||||||||||| | |||| | |||||||    
T  30784 acacacaagcacataaaaacacatattaaaacaattaaaaattaatctagcaaaaatcg 30842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 9293 - 9346
Alignment:
Q  5 acaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  9293 acaagcacatataaacacatattaaaacaatt-aaaataattctagcgacaatcg 9346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 23138 - 23081
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||| ||||||||||| |||||||||| ||||||| ||||||||||||||    
T  23138 acacacaagcacaaataaacacataataaaacaatt-aaaataaatctaacgaaaatcg 23081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 108828 - 108895
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    ||||||||||||||| ||||||||| |||||||||| |||||||||||| | |||||||  ||||||||    
T  108828 acacacaagcacataaaaacacataataaaacaatt-aaaataattctagcaaaaatcgggttgttaca 108895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 968 - 912
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||| ||||||| ||||||||||  ||||| |||||||||||||||||||||||||||    
T  968 acacagaagcacaaataaacacat--taaaataattaaaaataattctaacgaaaatcg 912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6451 - 6408
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataa 44  Q
    ||||||||||||||||||||||||| |||||| |||||||||||    
T  6451 acacacaagcacatataaacacataataaaactattaaaaataa 6408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 33093 - 33046
Alignment:
Q  10 cacatataaacacatattaaaacaattaaaaataattctaacgaaaat 57  Q
    |||||||||||||||| |||||||||||||||||| |||| |||||||    
T  33093 cacatataaacacataataaaacaattaaaaataaatctagcgaaaat 33046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 87178 - 87234
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||| |||||| ||||||||  ||||||||||||||||||||||| |||||||||    
T  87178 acacacaaacacataaaaacacat--taaaacaattaaaaataattctagcgaaaatcg 87234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 28293 - 28350
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||| ||| |||||||||||||||| ||||||||||||  ||||||||    
T  28293 acacacaagcacataaaaatacatattaaaacaatt-aaaataattctagtgaaaatcg 28350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 6240 - 6289
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaac 51  Q
    ||||||| ||||||| |||||||||||||||||||||||||||| ||||||    
T  6240 acacacatgcacata-aaacacatattaaaacaattaaaaataaatctaac 6289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 11325 - 11382
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||| | || ||||||| |||| |||||||||||||||||||||||||||    
T  11325 acacacaagcacaaaaaagcacatat-aaaataattaaaaataattctaacgaaaatcg 11382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 11913 - 11859
Alignment:
Q  15 ataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    ||||||||| || ||||||||||||||||| ||||||||||||||  ||||||||    
T  11913 ataaacacacataaaaacaattaaaaataaatctaacgaaaatcgggttgttaca 11859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 21789 - 21732
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||||||||| ||| ||||||||||||||||||||| |||| | |||||||    
T  21789 acacacaagcacatataa-cacctattaaaacaattaaaaataaatctagcaaaaatcg 21732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 103996 - 103938
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaatt-aaaaataattctaacgaaaatc 58  Q
    |||||||||||||||||||||| |||||||| |||| |||||||| |||| ||||||||    
T  103996 acacacaagcacatataaacacttattaaaataattaaaaaataaatctagcgaaaatc 103938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 80410 - 80467
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    |||||||||||||||||||  |||||||||||||||  |||||| ||||||||||||||    
T  80410 acacacaagcacatataaatgcatattaaaacaatt-caaataaatctaacgaaaatcg 80467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 89265 - 89197
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttacaa 70  Q
    |||||||| ||||||||| ||| || |||||||||||||||||| |||| ||||||||  ||||||||||    
T  89265 acacacaatcacatataa-cacgtaataaaacaattaaaaataaatctagcgaaaatctgattgttacaa 89197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 11853 - 11905
Alignment:
Q  7 aagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||| ||||||||||||||||||| ||||||||| | || ||||||||||||    
T  11853 aagcagatataaacacatattaaaataattaaaaacatttttaacgaaaatcg 11905  T

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Target: scaffold0010 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 31841 - 31909
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgaattgttaca 69  Q
    ||||| ||||||| ||||||||| | ||||| |||||||||||| |||| ||||||| | |||||||||    
T  31841 acacaaaagcacaaataaacacacaataaaataattaaaaataaatctagcgaaaattggattgttaca 31909  T

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Target: scaffold1295 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 922 - 978
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||| ||||||||||  ||||| ||||||||||| ||||||| |||||||    
T  922 acacacaagcacaaataaacacat--taaaataattaaaaatatttctaacaaaaatcg 978  T

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Target: scaffold0589 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 8654 - 8713
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaatt-aaaaataattctaacgaaaatcg 59  Q
    ||||||||||||||||||  ||||| |||||||||| |||||||| |||| |||||||||    
T  8654 acacacaagcacatataacaacataataaaacaattaaaaaataaatctagcgaaaatcg 8713  T

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Target: scaffold0014 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 160169 - 160212
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataa 44  Q
    |||||||||||||||||||||||||   ||||||||||||||||    
T  160169 acacacaagcacatataaacacataaataaacaattaaaaataa 160212  T

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Target: scaffold0808 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 1690 - 1637
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaa 55  Q
    ||||| ||||||||||||||||||| | |||||||||||||||| |||| |||||    
T  1690 acacagaagcacatataaacacataat-aaacaattaaaaataaatctagcgaaa 1637  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 70281 - 70339
Alignment:
Q  1 acacacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||||| ||||||||| | ||||| |||||||||||| | || |||||||||    
T  70281 acacacaagcacaaataaacacacaataaaataattaaaaataaatatagcgaaaatcg 70339  T

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Target: scaffold0643 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0643
Description:

Target: scaffold0643; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 360 - 416
Alignment:
Q  3 acacaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcg 59  Q
    ||||||||||| ||||| || || |||||||||||||||||| |||| | |||||||    
T  360 acacaagcacacataaatacgtaataaaacaattaaaaataaatctagcaaaaatcg 416  T

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