View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1701_low_22 (Length: 306)

Name: NF1701_low_22
Description: NF1701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1701_low_22
NF1701_low_22
[»] chr1 (53 HSPs)
chr1 (110-291)||(29515404-29515593)
chr1 (4-85)||(45195127-45195208)
chr1 (18-85)||(20585103-20585170)
chr1 (3-85)||(47553240-47553322)
chr1 (3-85)||(19997707-19997789)
chr1 (3-85)||(25068895-25068977)
chr1 (3-85)||(38011742-38011824)
chr1 (20-85)||(28045034-28045099)
chr1 (13-84)||(15357047-15357118)
chr1 (3-85)||(16536909-16536991)
chr1 (3-85)||(25991307-25991388)
chr1 (4-69)||(831838-831903)
chr1 (4-81)||(17109910-17109987)
chr1 (30-71)||(19611328-19611369)
chr1 (20-85)||(45737864-45737929)
chr1 (24-71)||(11916573-11916620)
chr1 (28-71)||(50144057-50144100)
chr1 (3-85)||(24064633-24064715)
chr1 (3-85)||(27226214-27226296)
chr1 (3-85)||(44645823-44645905)
chr1 (24-85)||(1845984-1846045)
chr1 (24-85)||(27532465-27532526)
chr1 (3-64)||(36511505-36511566)
chr1 (3-84)||(42830641-42830722)
chr1 (20-85)||(52505414-52505479)
chr1 (29-85)||(25068351-25068407)
chr1 (21-85)||(33126306-33126370)
chr1 (1-85)||(44649179-44649263)
chr1 (20-64)||(47216633-47216677)
chr1 (20-71)||(18407104-18407155)
chr1 (20-71)||(27225693-27225744)
chr1 (20-83)||(51611920-51611983)
chr1 (22-64)||(7307081-7307123)
chr1 (33-71)||(19997634-19997672)
chr1 (3-69)||(41321616-41321682)
chr1 (3-85)||(41575901-41575983)
chr1 (3-85)||(43320019-43320101)
chr1 (3-85)||(45559199-45559281)
chr1 (29-71)||(45738026-45738068)
chr1 (18-71)||(1114329-1114382)
chr1 (20-85)||(8061146-8061211)
chr1 (30-71)||(19071739-19071780)
chr1 (30-71)||(19119629-19119670)
chr1 (20-85)||(31765892-31765956)
chr1 (30-71)||(44645288-44645329)
chr1 (48-85)||(47291719-47291756)
chr1 (30-71)||(49129032-49129073)
chr1 (19-71)||(831283-831335)
chr1 (29-85)||(25813048-25813104)
chr1 (30-70)||(28971468-28971508)
chr1 (29-85)||(38294246-38294302)
chr1 (29-85)||(41322187-41322243)
chr1 (29-85)||(52505966-52506022)
[»] chr5 (47 HSPs)
chr5 (1-84)||(30782815-30782898)
chr5 (4-85)||(13280035-13280116)
chr5 (4-85)||(22730491-22730572)
chr5 (3-85)||(4054830-4054912)
chr5 (3-85)||(8007165-8007247)
chr5 (20-85)||(9118955-9119019)
chr5 (20-85)||(20691687-20691751)
chr5 (20-84)||(3933427-3933491)
chr5 (20-71)||(1406241-1406292)
chr5 (20-71)||(17967940-17967991)
chr5 (22-85)||(37657963-37658026)
chr5 (14-85)||(40957303-40957374)
chr5 (22-64)||(3079763-3079805)
chr5 (3-85)||(9017751-9017833)
chr5 (29-71)||(13685995-13686037)
chr5 (3-85)||(40027388-40027470)
chr5 (18-71)||(4717278-4717331)
chr5 (20-85)||(4877267-4877332)
chr5 (3-84)||(17780903-17780984)
chr5 (20-85)||(24625383-24625448)
chr5 (20-85)||(27979788-27979853)
chr5 (20-64)||(2074727-2074771)
chr5 (29-85)||(4055400-4055456)
chr5 (29-85)||(20540973-20541029)
chr5 (3-83)||(37334478-37334558)
chr5 (29-85)||(42598876-42598932)
chr5 (29-64)||(13686634-13686669)
chr5 (22-85)||(15144536-15144599)
chr5 (18-85)||(20183479-20183546)
chr5 (20-71)||(31850022-31850073)
chr5 (29-71)||(4877380-4877422)
chr5 (29-71)||(17967846-17967888)
chr5 (29-71)||(36742148-36742190)
chr5 (28-69)||(4876736-4876777)
chr5 (3-84)||(8572803-8572884)
chr5 (29-70)||(18523755-18523796)
chr5 (20-69)||(38497346-38497395)
chr5 (4-85)||(38497916-38497997)
chr5 (21-69)||(141626-141674)
chr5 (3-71)||(1405686-1405754)
chr5 (1-85)||(1931377-1931461)
chr5 (22-82)||(2554135-2554195)
chr5 (29-69)||(6029481-6029521)
chr5 (29-85)||(9119539-9119595)
chr5 (29-85)||(20691141-20691197)
chr5 (29-85)||(24624844-24624900)
chr5 (29-85)||(37657408-37657464)
[»] chr7 (48 HSPs)
chr7 (20-85)||(29736682-29736747)
chr7 (20-85)||(27144302-27144367)
chr7 (1-85)||(23233379-23233463)
chr7 (1-85)||(23243040-23243124)
chr7 (18-85)||(5228527-5228594)
chr7 (3-85)||(38670572-38670654)
chr7 (3-85)||(43450203-43450285)
chr7 (4-85)||(25607500-25607581)
chr7 (20-85)||(33869311-33869376)
chr7 (3-85)||(11696760-11696842)
chr7 (3-85)||(317382-317464)
chr7 (3-85)||(2146140-2146222)
chr7 (19-85)||(3340893-3340959)
chr7 (20-85)||(1573206-1573271)
chr7 (20-85)||(29823451-29823516)
chr7 (20-85)||(32867791-32867856)
chr7 (20-85)||(36889972-36890037)
chr7 (20-71)||(4518408-4518459)
chr7 (22-85)||(8122750-8122813)
chr7 (22-85)||(36847955-36848018)
chr7 (3-85)||(16425441-16425523)
chr7 (29-71)||(20261587-20261629)
chr7 (3-85)||(32388036-32388118)
chr7 (29-71)||(40400929-40400971)
chr7 (20-85)||(6184772-6184837)
chr7 (20-84)||(28308118-28308182)
chr7 (29-69)||(30738217-30738257)
chr7 (21-85)||(39186784-39186847)
chr7 (29-85)||(40343887-40343943)
chr7 (22-85)||(20261127-20261190)
chr7 (22-85)||(23742548-23742611)
chr7 (18-85)||(34999303-34999369)
chr7 (3-85)||(25360-25442)
chr7 (29-71)||(10412561-10412603)
chr7 (3-85)||(13904321-13904403)
chr7 (3-85)||(22263867-22263949)
chr7 (29-71)||(28308676-28308718)
chr7 (29-71)||(32867271-32867313)
chr7 (22-84)||(38988308-38988370)
chr7 (24-69)||(7192123-7192168)
chr7 (20-85)||(30870467-30870532)
chr7 (30-71)||(40344442-40344483)
chr7 (29-85)||(317949-318005)
chr7 (29-69)||(22264444-22264484)
chr7 (21-84)||(23728326-23728389)
chr7 (29-85)||(25606951-25607007)
chr7 (29-69)||(29615543-29615583)
chr7 (1-85)||(42813467-42813551)
[»] chr8 (50 HSPs)
chr8 (4-84)||(33969099-33969179)
chr8 (3-85)||(37837465-37837547)
chr8 (20-85)||(14093603-14093668)
chr8 (4-85)||(21304071-21304152)
chr8 (6-82)||(33972408-33972484)
chr8 (15-85)||(30991359-30991429)
chr8 (20-85)||(3075429-3075494)
chr8 (20-85)||(8297691-8297756)
chr8 (4-85)||(10674389-10674470)
chr8 (20-85)||(11140217-11140282)
chr8 (24-85)||(37304782-37304842)
chr8 (20-80)||(24810150-24810210)
chr8 (3-83)||(25953994-25954074)
chr8 (18-81)||(45489242-45489305)
chr8 (3-85)||(6292620-6292702)
chr8 (3-85)||(25485315-25485397)
chr8 (3-85)||(30353950-30354032)
chr8 (3-85)||(39998476-39998558)
chr8 (19-85)||(44147519-44147585)
chr8 (20-64)||(3075255-3075299)
chr8 (1-81)||(12330970-12331050)
chr8 (3-71)||(22934395-22934463)
chr8 (20-84)||(40791645-40791709)
chr8 (23-83)||(44283819-44283879)
chr8 (26-85)||(15847985-15848044)
chr8 (28-71)||(24778016-24778059)
chr8 (22-81)||(29459151-29459210)
chr8 (22-81)||(32904106-32904165)
chr8 (22-85)||(32905216-32905279)
chr8 (22-85)||(34364472-34364535)
chr8 (18-85)||(34924922-34924989)
chr8 (30-85)||(43764211-43764266)
chr8 (29-71)||(11760073-11760115)
chr8 (29-71)||(14094156-14094198)
chr8 (3-85)||(17565227-17565309)
chr8 (3-85)||(25598347-25598429)
chr8 (29-71)||(31739538-31739580)
chr8 (29-71)||(34678624-34678666)
chr8 (3-85)||(34679814-34679896)
chr8 (29-71)||(37837583-37837625)
chr8 (29-70)||(8442685-8442726)
chr8 (20-85)||(10216024-10216089)
chr8 (20-85)||(13573305-13573370)
chr8 (20-85)||(36016213-36016278)
chr8 (36-85)||(37872336-37872385)
chr8 (9-41)||(4508506-4508538)
chr8 (15-71)||(11140109-11140165)
chr8 (31-71)||(13421472-13421512)
chr8 (23-83)||(40299043-40299103)
chr8 (33-85)||(42861580-42861632)
[»] chr2 (41 HSPs)
chr2 (3-83)||(32877822-32877902)
chr2 (20-84)||(4437431-4437495)
chr2 (3-85)||(38972567-38972649)
chr2 (1-85)||(5113703-5113787)
chr2 (3-71)||(20126064-20126132)
chr2 (20-85)||(34247951-34248016)
chr2 (20-85)||(35899258-35899323)
chr2 (20-85)||(43439248-43439312)
chr2 (5-85)||(552396-552476)
chr2 (1-85)||(5790908-5790992)
chr2 (1-85)||(26196766-26196849)
chr2 (29-85)||(35657465-35657521)
chr2 (20-84)||(42791602-42791666)
chr2 (22-85)||(13873437-13873500)
chr2 (22-85)||(14013562-14013625)
chr2 (22-85)||(31709625-31709688)
chr2 (14-85)||(41521556-41521627)
chr2 (29-71)||(11563823-11563865)
chr2 (3-69)||(16111071-16111137)
chr2 (3-81)||(18997084-18997162)
chr2 (3-85)||(33146591-33146673)
chr2 (29-71)||(44332388-44332430)
chr2 (20-85)||(11051679-11051744)
chr2 (20-85)||(20894168-20894233)
chr2 (3-83)||(40020645-40020725)
chr2 (4-64)||(44332184-44332244)
chr2 (20-71)||(17829171-17829222)
chr2 (20-71)||(24758238-24758289)
chr2 (18-85)||(33886412-33886479)
chr2 (1-63)||(11470402-11470464)
chr2 (22-84)||(31597705-31597767)
chr2 (22-84)||(37009117-37009179)
chr2 (22-68)||(40768956-40769002)
chr2 (29-71)||(41521708-41521750)
chr2 (30-71)||(36143784-36143825)
chr2 (13-62)||(37330285-37330334)
chr2 (29-69)||(5475141-5475181)
chr2 (29-85)||(20893230-20893286)
chr2 (7-71)||(22298256-22298320)
chr2 (29-85)||(39160273-39160329)
chr2 (29-85)||(39208865-39208921)
[»] scaffold0695 (2 HSPs)
scaffold0695 (20-85)||(2779-2844)
scaffold0695 (29-71)||(2250-2292)
[»] chr6 (47 HSPs)
chr6 (4-81)||(4100624-4100701)
chr6 (4-81)||(4125986-4126063)
chr6 (14-85)||(6936489-6936560)
chr6 (20-71)||(12767056-12767107)
chr6 (20-85)||(14873138-14873203)
chr6 (24-85)||(22268532-22268593)
chr6 (21-85)||(31281735-31281799)
chr6 (3-85)||(188322-188404)
chr6 (3-85)||(7127546-7127628)
chr6 (3-85)||(9240962-9241044)
chr6 (3-85)||(12026086-12026168)
chr6 (3-85)||(12033006-12033088)
chr6 (3-85)||(25577090-25577172)
chr6 (3-85)||(33276298-33276380)
chr6 (20-85)||(3767635-3767700)
chr6 (1-85)||(31881942-31882025)
chr6 (14-85)||(11522914-11522984)
chr6 (26-85)||(17336951-17337010)
chr6 (18-84)||(7448785-7448851)
chr6 (29-71)||(14306818-14306860)
chr6 (29-71)||(22022280-22022322)
chr6 (5-83)||(34794413-34794491)
chr6 (22-71)||(5916635-5916684)
chr6 (30-71)||(11794773-11794814)
chr6 (14-71)||(12767612-12767669)
chr6 (29-82)||(14313749-14313802)
chr6 (20-85)||(25527850-25527915)
chr6 (4-85)||(30462005-30462086)
chr6 (20-85)||(32113859-32113924)
chr6 (20-85)||(34709347-34709412)
chr6 (4-64)||(22022076-22022136)
chr6 (22-85)||(2523226-2523289)
chr6 (30-85)||(3767092-3767147)
chr6 (1-83)||(17311989-17312071)
chr6 (29-71)||(21802610-21802652)
chr6 (3-85)||(34280570-34280652)
chr6 (3-64)||(2091791-2091852)
chr6 (20-85)||(5443131-5443196)
chr6 (30-71)||(6936402-6936443)
chr6 (22-67)||(16325977-16326022)
chr6 (22-67)||(16349375-16349420)
chr6 (3-84)||(33950329-33950410)
chr6 (29-85)||(9241531-9241587)
chr6 (29-85)||(11523469-11523525)
chr6 (30-62)||(24620038-24620070)
chr6 (29-85)||(27923741-27923797)
chr6 (29-85)||(34709909-34709965)
[»] chr3 (54 HSPs)
chr3 (1-85)||(32221707-32221791)
chr3 (18-85)||(20030024-20030091)
chr3 (3-85)||(4757101-4757183)
chr3 (3-85)||(11055897-11055979)
chr3 (3-85)||(48224025-48224107)
chr3 (20-85)||(6293329-6293394)
chr3 (20-71)||(11388975-11389026)
chr3 (18-85)||(27394963-27395030)
chr3 (18-85)||(40927614-40927681)
chr3 (18-85)||(54404119-54404186)
chr3 (3-85)||(291671-291753)
chr3 (3-85)||(10887816-10887898)
chr3 (3-85)||(14601998-14602080)
chr3 (3-85)||(16067783-16067865)
chr3 (3-85)||(44950874-44950956)
chr3 (3-85)||(49764596-49764678)
chr3 (20-85)||(4558155-4558220)
chr3 (3-68)||(7725311-7725376)
chr3 (24-85)||(19546918-19546979)
chr3 (20-85)||(22129810-22129875)
chr3 (20-85)||(22524241-22524306)
chr3 (20-85)||(23309508-23309573)
chr3 (20-85)||(24542869-24542934)
chr3 (4-85)||(41586752-41586832)
chr3 (4-85)||(44499437-44499518)
chr3 (15-84)||(45241733-45241802)
chr3 (3-85)||(3089856-3089938)
chr3 (3-85)||(32737059-32737141)
chr3 (20-85)||(11581990-11582055)
chr3 (20-85)||(37183201-37183266)
chr3 (21-85)||(5963181-5963245)
chr3 (29-85)||(41865006-41865062)
chr3 (20-84)||(54876816-54876880)
chr3 (29-71)||(27255314-27255356)
chr3 (29-71)||(27395080-27395122)
chr3 (29-71)||(40036401-40036443)
chr3 (3-85)||(48841621-48841703)
chr3 (29-71)||(49080614-49080656)
chr3 (3-85)||(53490154-53490236)
chr3 (20-85)||(1780618-1780683)
chr3 (19-71)||(8449218-8449268)
chr3 (24-85)||(19538254-19538315)
chr3 (20-85)||(28248043-28248108)
chr3 (3-64)||(30128175-30128236)
chr3 (20-85)||(30604798-30604863)
chr3 (20-85)||(41865573-41865638)
chr3 (20-85)||(45307246-45307311)
chr3 (20-85)||(54606312-54606377)
chr3 (29-85)||(11056551-11056607)
chr3 (20-80)||(11397607-11397667)
chr3 (29-85)||(22130388-22130444)
chr3 (20-71)||(22518585-22518636)
chr3 (29-85)||(23308965-23309021)
chr3 (29-85)||(37183751-37183807)
[»] chr4 (70 HSPs)
chr4 (3-85)||(10155607-10155689)
chr4 (3-85)||(17201833-17201915)
chr4 (20-85)||(6233676-6233741)
chr4 (21-85)||(7478792-7478857)
chr4 (20-85)||(36897579-36897644)
chr4 (20-84)||(55069404-55069468)
chr4 (18-69)||(33032279-33032330)
chr4 (3-85)||(6232992-6233074)
chr4 (3-85)||(7165967-7166049)
chr4 (3-85)||(23308902-23308984)
chr4 (3-85)||(37423884-37423966)
chr4 (3-81)||(55814420-55814498)
chr4 (20-85)||(616021-616086)
chr4 (20-85)||(13395310-13395375)
chr4 (20-85)||(19313902-19313967)
chr4 (20-85)||(36651159-36651224)
chr4 (3-85)||(796487-796569)
chr4 (3-85)||(8192879-8192961)
chr4 (29-71)||(19313372-19313414)
chr4 (3-85)||(23272508-23272590)
chr4 (3-85)||(37423247-37423329)
chr4 (3-85)||(46076863-46076945)
chr4 (20-85)||(46095527-46095593)
chr4 (3-85)||(50824732-50824814)
chr4 (3-84)||(4950485-4950566)
chr4 (20-85)||(9784707-9784772)
chr4 (20-85)||(16191772-16191837)
chr4 (20-85)||(17729632-17729696)
chr4 (20-85)||(21037840-21037905)
chr4 (24-85)||(47931121-47931182)
chr4 (3-71)||(8138895-8138963)
chr4 (1-85)||(35854118-35854202)
chr4 (20-84)||(45847256-45847320)
chr4 (15-62)||(3690021-3690068)
chr4 (22-81)||(13482692-13482751)
chr4 (22-85)||(25009511-25009574)
chr4 (30-65)||(28464821-28464856)
chr4 (22-85)||(35667645-35667708)
chr4 (22-85)||(44665069-44665132)
chr4 (20-71)||(51019669-51019720)
chr4 (13-43)||(10519273-10519303)
chr4 (29-71)||(13482210-13482252)
chr4 (29-71)||(13771745-13771787)
chr4 (22-64)||(18362183-18362225)
chr4 (4-85)||(23721484-23721563)
chr4 (29-71)||(25010063-25010105)
chr4 (22-64)||(36600702-36600744)
chr4 (29-71)||(37424452-37424494)
chr4 (22-84)||(54092297-54092359)
chr4 (20-85)||(7851834-7851899)
chr4 (20-85)||(12251242-12251307)
chr4 (24-85)||(28464320-28464381)
chr4 (30-71)||(30192537-30192578)
chr4 (24-85)||(32448397-32448458)
chr4 (20-85)||(37708896-37708961)
chr4 (30-71)||(38720625-38720666)
chr4 (36-85)||(51267807-51267856)
chr4 (20-81)||(55139472-55139532)
chr4 (29-85)||(7165423-7165479)
chr4 (22-82)||(7797069-7797129)
chr4 (29-85)||(12250701-12250757)
chr4 (29-85)||(13392743-13392799)
chr4 (29-85)||(13395882-13395938)
chr4 (30-70)||(13772389-13772429)
chr4 (19-71)||(21037315-21037367)
chr4 (29-85)||(23265776-23265832)
chr4 (1-85)||(29979598-29979682)
chr4 (29-85)||(46096111-46096167)
chr4 (29-85)||(46138612-46138668)
chr4 (20-84)||(49702496-49702560)
[»] scaffold0340 (1 HSPs)
scaffold0340 (4-85)||(12748-12829)
[»] scaffold0004 (1 HSPs)
scaffold0004 (3-85)||(351825-351907)
[»] scaffold0361 (2 HSPs)
scaffold0361 (20-71)||(17154-17205)
scaffold0361 (3-71)||(16589-16657)
[»] scaffold0003 (2 HSPs)
scaffold0003 (22-81)||(421822-421881)
scaffold0003 (3-85)||(14153-14235)
[»] scaffold0105 (1 HSPs)
scaffold0105 (3-85)||(19535-19617)
[»] scaffold2113 (1 HSPs)
scaffold2113 (20-85)||(846-911)
[»] scaffold0533 (1 HSPs)
scaffold0533 (22-71)||(10043-10092)
[»] scaffold0368 (1 HSPs)
scaffold0368 (3-84)||(10697-10778)
[»] scaffold0289 (1 HSPs)
scaffold0289 (13-85)||(3522-3594)
[»] scaffold1192 (1 HSPs)
scaffold1192 (14-85)||(275-346)
[»] scaffold0102 (1 HSPs)
scaffold0102 (22-85)||(26893-26956)
[»] scaffold0068 (1 HSPs)
scaffold0068 (29-71)||(59287-59329)
[»] scaffold0115 (1 HSPs)
scaffold0115 (20-85)||(32802-32867)


Alignment Details
Target: chr1 (Bit Score: 139; Significance: 9e-73; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 110 - 291
Target Start/End: Complemental strand, 29515593 - 29515404
Alignment:
Q  110 aaattcatacaaatctacaagtggatttcacgttaacaaaataagtatttacaaactctattctatattttttacaacattg-----aat--gtgtat-a 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     |||  |||||| |    
T  29515593 aaattcatacaaatctacaagtggatttcacgttaacaaaataagtatttacaaactctattctatattttttacaacattgatctaaatgagtgtataa 29515494  T
Q  202 tatatagcatgtggaaaatgaaaactctagaagcaaaccaagatttaaagccagtagtagttgcacatgaaatcgcaacaatttcaagtg 291  Q
    || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  29515493 tagatagcatgtggaaaatggaaactctagaagcaaaccaagatttaaagccagtagtagttgcacataaaatcgcaacaatttcaagtg 29515404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 45195208 - 45195127
Alignment:
Q  4 tttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||  ||| |||||||||| |||||||||||||||| ||||||||||||||||||| |||||| || ||||||||||    
T  45195208 tttcactcgcctcccttaagagaagcttgaattacattctcctcccctcttatgttaaaatctacactttactccctcaata 45195127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 20585103 - 20585170
Alignment:
Q  18 cttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||| |||||| || ||||||||||    
T  20585103 cttaagagaagcttgaattacattctcctcccctcttatgttaaaatctacactttactccctcaata 20585170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 47553240 - 47553322
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||| |||| ||||||||||  |||||||||||||   ||||||||||||||||||| |||||| |||||||||||||    
T  47553240 atttcactcatctcccttaagagaagtttgaattacattcctctcccctcttatgttaaaatctacactttaatccctcaata 47553322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 19997707 - 19997789
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||| ||| | |||||||| | |||||||||||||| ||||||||||||||||||| |||| | || ||||||||||    
T  19997707 atttcactctcctcccctaagagaagcctgaattacattctcctcccctcttatgttaaaatctacattttactccctcaata 19997789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 25068977 - 25068895
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | |||||||| |||||||||||||| | ||||||||||||||||||| |||||| || ||||||||||    
T  25068977 atttcactcccctcccctaagagaagcttgaattacattcccctcccctcttatgttaaaatctacactttactccctcaata 25068895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 38011824 - 38011742
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | |||||||| |||||||||||||| | ||||||||||||||||||| |||||| || ||||||||||    
T  38011824 atttcactcccctcccctaagagaagcttgaattacattcccctcccctcttatgttaaaatctacactttactccctcaata 38011742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 28045099 - 28045034
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||| |||||| || ||||||||||    
T  28045099 taagagaagcttgaattacattctcctcccctcttatattaaaatctacactttactccctcaata 28045034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 15357047 - 15357118
Alignment:
Q  13 tctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaat 84  Q
    |||||| |||||||| |||||||||||||| | |||| |||||||||||||| |||||| || |||||||||    
T  15357047 tctctcctaagagaagcttgaattacattcccctcccgtcttatgttaaaatctacactttactccctcaat 15357118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 16536991 - 16536909
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| ||| |||||| |||||||||||||| | ||||||||||||||||||| ||| || || ||||||||||    
T  16536991 atttcactcccctcccttgagagaagcttgaattacattcccctcccctcttatgttaaaatctactctttactccctcaata 16536909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 25991388 - 25991307
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||| ||| | |||||||| |||||||||||||||| ||| | ||||||||||||| |||||| || ||||||||||    
T  25991388 atttcactctcctcccctaagagaagcttgaattacattctcctcctc-cttatgttaaaatctacactttactccctcaata 25991307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 831903 - 831838
Alignment:
Q  4 tttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttaca 69  Q
    ||||||||  ||||| |||||||| |||||||||||||||  | ||||||||||||||||||||||    
T  831903 tttcactcccctctcctaagagaagcttgaattacattcttcttccctcttatgttaaaatttaca 831838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 17109987 - 17109910
Alignment:
Q  4 tttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctc 81  Q
    ||||||||  ||| |||||||||| |||||||| ||||| | ||||||||||||||||||| |||||| || ||||||    
T  17109987 tttcactcccctcccttaagagaagcttgaattccattcccctcccctcttatgttaaaatctacactttactccctc 17109910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 19611369 - 19611328
Alignment:
Q  30 ttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  19611369 ttgaattacattctcttcccctcttatgttaaaatttacact 19611328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 45737929 - 45737864
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||||| | ||||| ||||||||||||| |||||| || ||||||||||    
T  45737929 taagagaagcttgaattacattcccctccccccttatgttaaaatctacactttactccctcaata 45737864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 11916573 - 11916620
Alignment:
Q  24 agaaacttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||| |||||||||||||||| ||||||||||||||||||| ||||||    
T  11916573 agaagcttgaattacattctcttcccctcttatgttaaaatctacact 11916620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 50144100 - 50144057
Alignment:
Q  28 acttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||||||| |||||||||||||||||||||||| ||||||    
T  50144100 acttgaattacactctcatcccctcttatgttaaaatatacact 50144057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 24064633 - 24064715
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||||| ||||||||  || ||||||||||   || |||||||||||||||| |||||| |||||||||||||    
T  24064633 atttcactcccctctcctaagagaagtttaaattacattcatctctcctcttatgttaaaatatacactttaatccctcaata 24064715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 27226296 - 27226214
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| ||| |||||| ||||||| |||||| | ||||||||||||||||||| |||||| || | ||||||||    
T  27226296 atttcactcccctcccttgagagaagcttgaatgacattcacctcccctcttatgttaaaatctacactttacttcctcaata 27226214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 44645905 - 44645823
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||| |||||| |||||||| |||||||||||||| | ||   |||||||||||||| || ||| || ||||||||||    
T  44645905 atttcactcatctctcgtaagagaagcttgaattacattcccctcatttcttatgttaaaatctatactttactccctcaata 44645823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 1845984 - 1846045
Alignment:
Q  24 agaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||| |||||||||||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  1845984 agaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaata 1846045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 27532526 - 27532465
Alignment:
Q  24 agaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||||||| |||||| || |||||||| ||||||| |||||| || ||||||||||    
T  27532526 agaaacttgaattatattctcctctcctcttattttaaaatctacactttactccctcaata 27532465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 36511505 - 36511566
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaat 64  Q
    |||||||||  || |||| |||||| |||||||||||||||| |||||| ||||||||||||    
T  36511505 atttcactcccctttcttgagagaagcttgaattacattctcctccccttttatgttaaaat 36511566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 42830641 - 42830722
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaat 84  Q
    |||||||||  ||| ||| |||||| |||||||||||||| | |||||| |||||||||||| ||| || || |||||||||    
T  42830641 atttcactcccctcccttgagagaagcttgaattacattcccctccccttttatgttaaaatctacgctttagtccctcaat 42830722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 52505414 - 52505479
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||| |   ||||||||||||||||||| |||||| || ||||||||||    
T  52505414 taagagaagcttgaattacatcccactcccctcttatgttaaaatctacactttactccctcaata 52505479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 25068351 - 25068407
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| |||| |||||||||| |||||||| |||||| || ||||||||||    
T  25068351 cttgaattacactctcctcccctcttaagttaaaatatacactttactccctcaata 25068407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 33126306 - 33126370
Alignment:
Q  21 aagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||  ||||||||||||| | ||||||||||||||||||| ||| || || ||||||||||    
T  33126306 aagagaagtttgaattacattcccctcccctcttatgttaaaatctacgctttactccctcaata 33126370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 44649263 - 44649179
Alignment:
Q  1 acatttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||| |||||| |||| | |||||||| |||||||||||||| | ||   |||||||||||||| |||||| || ||||||||||    
T  44649263 acatatcactcatctcccctaagagaagcttgaattacattcccctcatttcttatgttaaaatctacactttactccctcaata 44649179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 47216677 - 47216633
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaat 64  Q
    |||||||| |||||||||||||| | |||||||||||||||||||    
T  47216677 taagagaagcttgaattacattcccctcccctcttatgttaaaat 47216633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 18407155 - 18407104
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||| |||||||||||||| | ||||| ||||||||||||| ||||||    
T  18407155 taagagaagcttgaattacattcccctccccccttatgttaaaatctacact 18407104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 27225693 - 27225744
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||  ||||||||||| |||| ||||||||||||||||||| ||||||    
T  27225693 taagagatgcttgaattacactctcctcccctcttatgttaaaatatacact 27225744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 51611920 - 51611983
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaa 83  Q
    ||||||||  ||||||| ||||||  ||||||||||||||||||| |||||| || ||||||||    
T  51611920 taagagaagtttgaattgcattcttctcccctcttatgttaaaatctacactttattccctcaa 51611983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 7307081 - 7307123
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaat 64  Q
    ||||||||||||||||||||| | | |||||||||||||||||    
T  7307081 agagaaacttgaattacattccccttccctcttatgttaaaat 7307123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 19997634 - 19997672
Alignment:
Q  33 aattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  19997634 aattacattctcctcccctcttatgttaaaatatacact 19997672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 41321616 - 41321682
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttaca 69  Q
    |||||||||  ||| | |||||||| |||||||||||| | | ||||||||||||||||||| ||||    
T  41321616 atttcactcccctcccctaagagaagcttgaattacatccccctcccctcttatgttaaaatctaca 41321682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 41575983 - 41575901
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| ||| ||||||  ||||||||||||| | ||||||||||||||||||| |||  | || ||||||||||    
T  41575983 atttcactcccctcccttgagagaagattgaattacattcccctcccctcttatgttaaaatctacgatttactccctcaata 41575901  T

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Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 43320019 - 43320101
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||| |||| ||| |||||| |||||||||||||| | |||| ||||| |||||||| ||| |  || ||||||||||    
T  43320019 atttcactcctctcccttgagagaagcttgaattacattcccctcccatcttaagttaaaatctacgcattagtccctcaata 43320101  T

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Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 45559199 - 45559281
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | |||||||| ||| |||||||||| | || |||||||||||||||| |||||| || || |||||||    
T  45559199 atttcactccactcccctaagagaagcttaaattacattcccctctcctcttatgttaaaatctacactttagtctctcaata 45559281  T

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Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 45738026 - 45738068
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||||||||| |||| ||||||||||||||||||| ||||||    
T  45738026 cttgaattacactctcctcccctcttatgttaaaatatacact 45738068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 1114329 - 1114382
Alignment:
Q  18 cttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||| |||| ||||||||||||||   ||||||||||||||||||| ||||||    
T  1114329 cttaaaagaagcttgaattacattcagctcccctcttatgttaaaatctacact 1114382  T

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Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 8061146 - 8061211
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||||  | |||  |||||||||||||| |||||| || ||||||||||    
T  8061146 taagagaagcttgaattacatttccctccattcttatgttaaaatctacactttactccctcaata 8061211  T

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Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 19071739 - 19071780
Alignment:
Q  30 ttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||||| |||| ||||||||||||||||||| ||||||    
T  19071739 ttgaattacactctcctcccctcttatgttaaaatatacact 19071780  T

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Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 19119629 - 19119670
Alignment:
Q  30 ttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||||| |||| ||||||||||||||||||| ||||||    
T  19119629 ttgaattacactctcctcccctcttatgttaaaatatacact 19119670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 31765956 - 31765892
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||||  | |||| |||||||||||||| |||||| || ||||||||||    
T  31765956 taagagaagcttgaattacattaccctccc-tcttatgttaaaatctacactttactccctcaata 31765892  T

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Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 44645288 - 44645329
Alignment:
Q  30 ttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||||| |||||||| ||||||||||||||| ||||||    
T  44645288 ttgaattacactctcatcctctcttatgttaaaatatacact 44645329  T

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Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 85
Target Start/End: Original strand, 47291719 - 47291756
Alignment:
Q  48 ccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  47291719 ccctcttatgttaaaatctacactttaatccctcaata 47291756  T

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Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 49129032 - 49129073
Alignment:
Q  30 ttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||||| ||||||||| |||||||||||||| ||||||    
T  49129032 ttgaattacactctcatcccttcttatgttaaaatatacact 49129073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 831283 - 831335
Alignment:
Q  19 ttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||||||| |||||||||||||| | | || |||||||||||||| ||||||    
T  831283 ttaagagaagcttgaattacattccccttccatcttatgttaaaatatacact 831335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 25813048 - 25813104
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| || | |||||||||| |||||||| |||||| || ||||||||||    
T  25813048 cttgaattacactcccctcccctcttaagttaaaatatacactttactccctcaata 25813104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 28971508 - 28971468
Alignment:
Q  30 ttgaattacattctcatcccctcttatgttaaaatttacac 70  Q
    ||||||||||||  ||||||||||||||||||||| |||||    
T  28971508 ttgaattacatttacatcccctcttatgttaaaatatacac 28971468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 38294246 - 38294302
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||||||  | || |||||||||||||||| |||||| || ||||||||||    
T  38294246 cttgaattacatttccctcacctcttatgttaaaatctacactttactccctcaata 38294302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 41322243 - 41322187
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| || | |||||||||| |||||||| |||||| || ||||||||||    
T  41322243 cttgaattacactcccctcccctcttaagttaaaatatacactttactccctcaata 41322187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 52506022 - 52505966
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| || | |||||||||| |||||||| |||||| || ||||||||||    
T  52506022 cttgaattacactcccctcccctcttaagttaaaatatacactttactccctcaata 52505966  T

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Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 30782815 - 30782898
Alignment:
Q  1 acatttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaat 84  Q
    |||| ||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| || |||||||||    
T  30782815 acatatcactcccctctcttaagagaaacttgaattacattctcctcccctcttatgttaaaatctacactttactccctcaat 30782898  T

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Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 13280116 - 13280035
Alignment:
Q  4 tttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||  ||||| |||| |||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||    
T  13280116 tttcactcctcttccttaaaagaagcttgaattacattctcctcccctcttatgttaaaatctacactttaatccctcaata 13280035  T

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Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 22730491 - 22730572
Alignment:
Q  4 tttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  || || ||||||| |||||||||||||||| ||||||||||||||||||| |||||| || ||||||||||    
T  22730491 tttcactctcatccctcaagagaagcttgaattacattctcctcccctcttatgttaaaatctacactttactccctcaata 22730572  T

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Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 4054830 - 4054912
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | |||||||| |||||||||||||| | ||||||||||||||||||| |||||| || ||||||||||    
T  4054830 atttcactcccctcccctaagagaagcttgaattacattcccctcccctcttatgttaaaatctacactttactccctcaata 4054912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 8007165 - 8007247
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||| ||| | |||||||| ||||||||||||||   | ||||||||||||||||| |||||| |||||||||||||    
T  8007165 atttcactctcctcccctaagagaagcttgaattacattcctcttccctcttatgttaaaatctacactttaatccctcaata 8007247  T

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Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 9118955 - 9119019
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||| | | |||||||||||||||||||||||||| || ||||||||||    
T  9118955 taagagaagcttgaattacatcccc-tcccctcttatgttaaaatttacactttactccctcaata 9119019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 20691751 - 20691687
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||||| | ||||||||||||||||||| |||||| || ||||||||||    
T  20691751 taagagaagcttgaattacattccc-tcccctcttatgttaaaatctacactttactccctcaata 20691687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 3933427 - 3933491
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaat 84  Q
    |||||||| |||||||||||||| | || |||||||||||||||| |||||| || |||||||||    
T  3933427 taagagaagcttgaattacattcccctcacctcttatgttaaaatctacactttactccctcaat 3933491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 1406292 - 1406241
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||| ||||||||||| ||||||| |||||||||||||||| ||||||    
T  1406292 taagagaagcttgaattacactctcatctcctcttatgttaaaatatacact 1406241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 17967940 - 17967991
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||| ||||||||||||| ||||||| |||||||||||||| ||||||    
T  17967940 taagagaagcttgaattacattttcatcccttcttatgttaaaatctacact 17967991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 37658026 - 37657963
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||| |||||||||||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  37658026 agagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaata 37657963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 40957374 - 40957303
Alignment:
Q  14 ctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||| |||||||| |||||||||||||||| |||||||||||  |||||| |||||| || ||| ||||||    
T  40957374 ctctcctaagagaagcttgaattacattctcctcccctcttataataaaatctacactttactccatcaata 40957303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 3079805 - 3079763
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaat 64  Q
    |||||| ||||||||||||| ||||||||||||||||||||||    
T  3079805 agagaagcttgaattacattatcatcccctcttatgttaaaat 3079763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 9017751 - 9017833
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||| ||| ||| |||||| |||||||||||||    |||||||||| |||||||||||| || || ||||||||||    
T  9017751 atttcactctcctcccttgagagaagcttgaattacatttctttcccctcttaagttaaaatttacgctttagtccctcaata 9017833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 13685995 - 13686037
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  13685995 cttgaattacactctcatcccctcttatgttaaaatatacact 13686037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 40027470 - 40027388
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||||| |||||||| |||||||||||||  | |||| ||||||||| |||| |||||| |||||||| ||||    
T  40027470 atttcactcccctctcctaagagaagcttgaattacatttccctcccttcttatgttcaaatctacactttaatcccttaata 40027388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 4717331 - 4717278
Alignment:
Q  18 cttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||| ||||| ||||||||||| ||||||||| |||||||||||||| ||||||    
T  4717331 cttatgagaagcttgaattacactctcatcccttcttatgttaaaatatacact 4717278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 4877332 - 4877267
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||||| | || || ||||||||||||| |||||| || ||||||||||    
T  4877332 taagagaagcttgaattacattcccctcaccccttatgttaaaatctacactttactccctcaata 4877267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 17780984 - 17780903
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaat 84  Q
    |||||||||  ||| ||| |||||| |||||||||||||| | || ||| |||||||||||| |||||| || |||||||||    
T  17780984 atttcactccactcccttgagagaagcttgaattacattcccctctccttttatgttaaaatctacactttagtccctcaat 17780903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 24625448 - 24625383
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||| |   ||||||||||||||||||| |||||| || ||||||||||    
T  24625448 taagagaagcttgaattacatcccactcccctcttatgttaaaatctacactttactccctcaata 24625383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 27979853 - 27979788
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||  |||||||||||||| | |||||||| |||||||||| |||||| || ||||||||||    
T  27979853 taagagatgcttgaattacattcccctcccctctcatgttaaaatctacactttactccctcaata 27979788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 2074771 - 2074727
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaat 64  Q
    |||||||||||||||||||| || | |||||||||||||||||||    
T  2074771 taagagaaacttgaattacactcccctcccctcttatgttaaaat 2074727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 4055456 - 4055400
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| |||| |||||||||| |||||||| |||||| || ||||||||||    
T  4055456 cttgaattacactctcctcccctcttaagttaaaatatacactttactccctcaata 4055400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 20541029 - 20540973
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||||||||| |||||||||| |||||||| |||||| || ||| ||||||    
T  20541029 cttgaattacattctcctcccctcttaagttaaaatatacactttactccttcaata 20540973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 37334558 - 37334478
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaa 83  Q
    |||||||||  ||| | |||||||| |||||||||||| | | ||||||||||||||||||| |||| | || ||||||||    
T  37334558 atttcactcccctcccctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacaatttactccctcaa 37334478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 42598932 - 42598876
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| ||   ||||||||||||||||||| |||||| |||||||||||||    
T  42598932 cttgaattacactcctctcccctcttatgttaaaatctacactttaatccctcaata 42598876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 64
Target Start/End: Complemental strand, 13686669 - 13686634
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaat 64  Q
    ||||||||||| ||||||||||||||||||||||||    
T  13686669 cttgaattacactctcatcccctcttatgttaaaat 13686634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 15144536 - 15144599
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||| |||||||||||||| | || |||||||||||||||| ||| || || ||||||||||    
T  15144536 agagaagcttgaattacattcccctcacctcttatgttaaaatctacgctttagtccctcaata 15144599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 20183479 - 20183546
Alignment:
Q  18 cttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  |||||||||||||  | |||||||||| |||||||| |||||| || ||||||||||    
T  20183479 cttaagagaggcttgaattacatttccctcccctcttaagttaaaatctacactttagtccctcaata 20183546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 31850022 - 31850073
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||  ||||||||||| |||||||| ||||||||||||||| ||||||    
T  31850022 taagagatgcttgaattacactctcatcctctcttatgttaaaatatacact 31850073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 4877422 - 4877380
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||||||||| |||| ||||||||||||||||||| ||||||    
T  4877422 cttgaattacactctcctcccctcttatgttaaaatatacact 4877380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 17967846 - 17967888
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||    
T  17967846 cttgaattacattttcatctcctcttatgttaaaatatacact 17967888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 36742148 - 36742190
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||||||| | |||||||||||||||||||||||| ||||||    
T  36742148 cttgaattaaactctcatcccctcttatgttaaaatatacact 36742190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 4876736 - 4876777
Alignment:
Q  28 acttgaattacattctcatcccctcttatgttaaaatttaca 69  Q
    |||||||| ||| |||||||||||||||||||||||| ||||    
T  4876736 acttgaataacactctcatcccctcttatgttaaaatataca 4876777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 8572803 - 8572884
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaat 84  Q
    |||||||||  ||| ||| |||||| ||| |||||||||||| |||||| || ||||||||| ||| || || |||||||||    
T  8572803 atttcactcccctcccttgagagaagctttaattacattctcctccccttttttgttaaaatgtacgctttagtccctcaat 8572884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 18523755 - 18523796
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacac 70  Q
    ||||||||||| | |||||||||||||||||||||| |||||    
T  18523755 cttgaattacactttcatcccctcttatgttaaaatatacac 18523796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 38497346 - 38497395
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttaca 69  Q
    |||||||| ||||||||||| |||  ||||||||||||||||||| ||||    
T  38497346 taagagaagcttgaattacactcttctcccctcttatgttaaaatataca 38497395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 38497997 - 38497916
Alignment:
Q  4 tttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||| ||| |||||||||  ||||||||||||  |  |||| |||||| ||||||| |||||| || ||||||||||    
T  38497997 tttcactctcctcccttaagagatgcttgaattacatcattctcccatcttatattaaaatatacactttactccctcaata 38497916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 141674 - 141626
Alignment:
Q  21 aagagaaacttgaattacattctcatcccctcttatgttaaaatttaca 69  Q
    ||||||||||||||||| ||| || ||| ||||||||||||||| ||||    
T  141674 aagagaaacttgaattatattttcttccactcttatgttaaaatataca 141626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 1405686 - 1405754
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||||  ||| ||||| |||| |||||||||||||| | |||||||||| || ||||| ||||||    
T  1405686 atttcactcccctcccttaatagaagcttgaattacattcccctcccctcttaagtcaaaatctacact 1405754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 1931377 - 1931461
Alignment:
Q  1 acatttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||||   || |||||||||| | | ||||||||||   ||||||||| ||||||||| |||||| || ||||||||||    
T  1931377 acatttcactcccgtcccttaagagaagcctcaattacattcctctcccctcttttgttaaaatctacactttactccctcaata 1931461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 2554195 - 2554135
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctca 82  Q
    |||||| ||||||||||||| || ||||| ||||||||||||| ||| || || |||||||    
T  2554195 agagaagcttgaattacattatcctccccacttatgttaaaatctacgctttactccctca 2554135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 6029481 - 6029521
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttaca 69  Q
    ||||||||||| |||||||| ||||||||||||||| ||||    
T  6029481 cttgaattacactctcatcctctcttatgttaaaatataca 6029521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 9119595 - 9119539
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| || | |||||||||| |||||||| |||||| || ||||||||||    
T  9119595 cttgaattacactcccctcccctcttaagttaaaatgtacactttactccctcaata 9119539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 20691141 - 20691197
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| || | |||||||||| |||||||| |||||| || ||||||||||    
T  20691141 cttgaattacactcccctcccctcttaagttaaaatatacactttactccctcaata 20691197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 24624844 - 24624900
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| || | |||||||||| |||||||| |||||| || ||||||||||    
T  24624844 cttgaattacactcccctcccctcttaagttaaaatatacactttactccctcaata 24624900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 37657408 - 37657464
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| || | |||||||||| |||||||| |||||| || ||||||||||    
T  37657408 cttgaattacactcccctcccctcttaagttaaaatatacactttactccctcaata 37657464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 29736747 - 29736682
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||| || ||||||||||    
T  29736747 taagagaagcttgaattacattctcatcccctcttatgttaaaatctacactttagtccctcaata 29736682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 27144302 - 27144367
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||||| ||||||||||||||||||||| |||||| || ||||||||||    
T  27144302 taagagaatcttgaattacattcccatcccctcttatgttaaaatctacactttattccctcaata 27144367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 23233463 - 23233379
Alignment:
Q  1 acatttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||   ||| ||||||||||||||||||||||||| ||||||||||||||||||||| || | | || ||||||||||    
T  23233463 acatttcacttccctcccttaagagaaacttgaattacattcacatcccctcttatgttaaaatctatattttactccctcaata 23233379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 23243124 - 23243040
Alignment:
Q  1 acatttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||   ||| ||||||||||||||||||||||||| ||||||||||||||||||||| || | | || ||||||||||    
T  23243124 acatttcacttccctcccttaagagaaacttgaattacattcacatcccctcttatgttaaaatctatattttactccctcaata 23243040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 5228594 - 5228527
Alignment:
Q  18 cttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||| |||||||||||||||| |||| |||||||||||||| |||||| || ||||||||||    
T  5228594 cttaagagaagcttgaattacattctcctcccttcttatgttaaaatctacactttactccctcaata 5228527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 38670654 - 38670572
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||| ||||| ||||||||  ||||||||||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  38670654 atttcactctcctctcctaagagaaggttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaata 38670572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 43450203 - 43450285
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||| |||| ||| |||||| |||||||||||||| | ||||||||||||||||||| ||| || || ||||||||||    
T  43450203 atttcactcctctcccttgagagaagcttgaattacattcccctcccctcttatgttaaaatctacgctttagtccctcaata 43450285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 25607581 - 25607500
Alignment:
Q  4 tttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||| ||| | ||||||||||||||||||||| | | || |||||||||||||||| |||||| || ||||||||||    
T  25607581 tttcactctcctcgcctaagagaaacttgaattacatccccctctcctcttatgttaaaatctacactttactccctcaata 25607500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 33869311 - 33869376
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||  ||||||| ||||||||||||||||||||||||||| |||||| || ||||||||||    
T  33869311 taagagaagtttgaatttcattctcatcccctcttatgttaaaatctacactttactccctcaata 33869376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 11696842 - 11696760
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattc-tcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||| | | |||||||||| |||||||||||||| ||| |||||||||||||||||| ||| ||||| ||||||||||    
T  11696842 atttcactctccccccttaagagaagcttgaattacattcctca-cccctcttatgttaaaatgtacgctgtactccctcaata 11696760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 317382 - 317464
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | |||||||| |||||||||||||  | ||||||||||||||||||| |||||| || ||||||||||    
T  317382 atttcactcccctcccctaagagaagcttgaattacatttccctcccctcttatgttaaaatctacactttactccctcaata 317464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 2146140 - 2146222
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | |||||||| |||||||||||||| | ||||||||||||||||||| |||||| || ||| ||||||    
T  2146140 atttcactcccctcccctaagagaagcttgaattacattcccctcccctcttatgttaaaatctacactttactccttcaata 2146222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 3340893 - 3340959
Alignment:
Q  19 ttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||| | |||||||||||| | ||||||||||||||||||| |||||| || ||||||||||    
T  3340893 ttaagagaagcatgaattacattcccctcccctcttatgttaaaatctacactttactccctcaata 3340959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 1573206 - 1573271
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| ||||||||||||||   ||||||||||||||||||| |||||| || ||||||||||    
T  1573206 taagagaagcttgaattacattccactcccctcttatgttaaaatctacactttactccctcaata 1573271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 29823451 - 29823516
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  29823451 taagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaata 29823516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 32867856 - 32867791
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||||| | ||| ||||||||||||||| |||||| || ||||||||||    
T  32867856 taagagaagcttgaattacattcccctcctctcttatgttaaaatctacactttactccctcaata 32867791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 36890037 - 36889972
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||||| | |||| |||||||||||||| |||||  |||||||||||||    
T  36890037 taagagaagcttgaattacattcccctcccttcttatgttaaaatctacacattaatccctcaata 36889972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 4518408 - 4518459
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||| ||| ||||||||||||||||||||| |||||||||| ||||||    
T  4518408 taagagaagcttaaattacattctcatcccctctaatgttaaaatctacact 4518459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 8122750 - 8122813
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||| |||||||||||||| |||||||||||| |||||||| ||| || || ||||||||||    
T  8122750 agagaagcttgaattacattcccatcccctcttaagttaaaatctacgctttagtccctcaata 8122813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 36847955 - 36848018
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||| |||||||||||||| | |||||||||| |||||||| ||| || |||||||||||||    
T  36847955 agagaagcttgaattacattcccctcccctcttaagttaaaatctacgctttaatccctcaata 36848018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 16425441 - 16425523
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||| | || ||| |||||| |||||||||||||||| | |||||||||||| |||| ||||||  | ||||||||||    
T  16425441 atttcactcctatcccttgagagaagcttgaattacattctccttccctcttatgttcaaatctacacttaagtccctcaata 16425523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 20261629 - 20261587
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  20261629 cttgaattacactctcatcccctcttatgttaaaatatacact 20261587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 32388118 - 32388036
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||| ||| | | ||||||  ||||||||||||||| || |||||||||||||||| ||| || || ||||||||||    
T  32388118 atttcactctcctcccctgagagaagtttgaattacattctcttctcctcttatgttaaaatatacgctttactccctcaata 32388036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 40400929 - 40400971
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  40400929 cttgaattacactctcatcccctcttatgttaaaatatacact 40400971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 6184772 - 6184837
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||| | | || |||||||||||||||| |||||| || ||||||||||    
T  6184772 taagagaagcttgaattacatccccctctcctcttatgttaaaatctacactttactccctcaata 6184837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 28308118 - 28308182
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaat 84  Q
    |||||||||| |||||||||||| | ||||| ||||||||||||| |||||| || ||| |||||    
T  28308118 taagagaaacatgaattacattcccgtccccacttatgttaaaatctacactttactccatcaat 28308182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 30738217 - 30738257
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttaca 69  Q
    ||||||||||| |||||||| ||||||||||||||||||||    
T  30738217 cttgaattacactctcatcctctcttatgttaaaatttaca 30738257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 39186847 - 39186784
Alignment:
Q  21 aagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||| |||||||||||||| | ||||| ||||||||||||| |||||| || ||||||||||    
T  39186847 aagagaagcttgaattacattcccctcccc-cttatgttaaaatctacactttactccctcaata 39186784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 40343887 - 40343943
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  40343887 cttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaata 40343943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 20261127 - 20261190
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||| |||||||||||||| | |||||||||| |||||||| ||| || || ||||||||||    
T  20261127 agagaagcttgaattacattcccctcccctcttacgttaaaatctactctttactccctcaata 20261190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 23742611 - 23742548
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||| |||||||||||||||  |||||||||||  |||||| |||||| || ||||||||||    
T  23742611 agagaagcttgaattacattcttctcccctcttataataaaatctacactttactccctcaata 23742548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 34999303 - 34999369
Alignment:
Q  18 cttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||| |||||||||||| | | ||||| ||||||||||||| |||||| || ||||||||||    
T  34999303 cttaagagaagcttgaattacatccccctcccc-cttatgttaaaatctacactttactccctcaata 34999369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 25360 - 25442
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | |||||||| ||||||||||||   | ||||||||||| ||||||| |||||| || ||||||||||    
T  25360 atttcactcccctcccctaagagaagcttgaattacatctccctcccctcttatattaaaatctacactttactccctcaata 25442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 10412603 - 10412561
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||||||||| |||| ||||||||||||||||||| ||||||    
T  10412603 cttgaattacactctcctcccctcttatgttaaaatatacact 10412561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 13904403 - 13904321
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||| |||  || |||||| |||||||||||||| | ||||||||||||||| ||| |||  | || ||||||||||    
T  13904403 atttcactctcctccgttgagagaagcttgaattacattcccctcccctcttatgttagaatatacgatttagtccctcaata 13904321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 22263867 - 22263949
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| ||| || ||| |||||||||||||| | ||||||||||||||||||| ||| || ||  |||||||||    
T  22263867 atttcactcccctcccttgagggaagcttgaattacattcccctcccctcttatgttaaaatctacgctttacaccctcaata 22263949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 28308718 - 28308676
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||    
T  28308718 cttgaattacactctcatctcctcttatgttaaaatatacact 28308676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 32867271 - 32867313
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||||||||| | ||||||||||||||||||| ||||||    
T  32867271 cttgaattacattcccctcccctcttatgttaaaatatacact 32867313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 38988370 - 38988308
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaat 84  Q
    |||||||||| ||||||||| || |||||| |||||||||||| |||| | || |||||||||    
T  38988370 agagaaacttcaattacattttcctccccttttatgttaaaatctacaatttagtccctcaat 38988308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 7192168 - 7192123
Alignment:
Q  24 agaaacttgaattacattctcatcccctcttatgttaaaatttaca 69  Q
    |||| ||||||||||||||||  |||||||||||||||||| ||||    
T  7192168 agaagcttgaattacattctccacccctcttatgttaaaatctaca 7192123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 30870532 - 30870467
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||||  | |||| |||||||||||||| |||| | || ||||||||||    
T  30870532 taagagaagcttgaattacatttccttcccttcttatgttaaaatctacattttactccctcaata 30870467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 40344483 - 40344442
Alignment:
Q  30 ttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||||| |||| ||||||||||||||||||| ||||||    
T  40344483 ttgaattacactctcctcccctcttatgttaaaatatacact 40344442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 318005 - 317949
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| || | |||||||||| |||||||| |||||| || ||||||||||    
T  318005 cttgaattacactcccctcccctcttaagttaaaatatacactttactccctcaata 317949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 22264484 - 22264444
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttaca 69  Q
    ||||||| ||| |||||||||||||||||||||||| ||||    
T  22264484 cttgaataacactctcatcccctcttatgttaaaatataca 22264444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 23728389 - 23728326
Alignment:
Q  21 aagagaaacttgaattacatt-ctcatcccctcttatgttaaaatttacactgtaatccctcaat 84  Q
    ||||||| ||||||| ||||| ||| ||||||||||||||||||| |||||| || |||||||||    
T  23728389 aagagaagcttgaatcacatttctc-tcccctcttatgttaaaatctacactttactccctcaat 23728326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 25606951 - 25607007
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| || | |||||||||| |||||||| |||||| || ||||||||||    
T  25606951 cttgaattacactcccctcccctcttaagttaaaatatacactttactccctcaata 25607007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 29615543 - 29615583
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttaca 69  Q
    ||||||||||| |||| ||||||||||||||||||| ||||    
T  29615543 cttgaattacactctcctcccctcttatgttaaaatataca 29615583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 42813551 - 42813467
Alignment:
Q  1 acatttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||| |||  ||| ||| |||||| |||||||||||||| | |||||||||| ||||||||  || || || ||||||||||    
T  42813551 acatttccctcccctcccttgagagaagcttgaattacattcccctcccctcttaagttaaaatccactctttagtccctcaata 42813467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 5e-19; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 33969099 - 33969179
Alignment:
Q  4 tttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaat 84  Q
    ||||||||  ||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||| || |||||||||    
T  33969099 tttcactcccctcccttaagagaaacttgaattgcattctcctcccctcttatgttaaaatctacactttactccctcaat 33969179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 37837547 - 37837465
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||| ||||||| ||||||||||||||||||||| | ||||||||||||||||||| ||| || || || |||||||    
T  37837547 atttcactctcctctcttgagagaaacttgaattacattcccctcccctcttatgttaaaatctacgctttagtctctcaata 37837465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 14093603 - 14093668
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||||| | ||||||||||||||||||| |||||| |||||||||||||    
T  14093603 taagagaagcttgaattacattcccctcccctcttatgttaaaatctacactttaatccctcaata 14093668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 21304071 - 21304152
Alignment:
Q  4 tttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||  ||| |||||||||| |||||||||||||| | ||| ||||||||||||||| |||||| || ||||||||||    
T  21304071 tttcactcacctcccttaagagaagcttgaattacattcacctcctctcttatgttaaaatctacactttactccctcaata 21304152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 33972408 - 33972484
Alignment:
Q  6 tcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctca 82  Q
    |||||| |||| | |||||||||| ||||||||||||||  |||||||||||||||||| |||||| || |||||||    
T  33972408 tcactcctctcccctaagagaaacatgaattacattctccgcccctcttatgttaaaatctacactttactccctca 33972484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 30991429 - 30991359
Alignment:
Q  15 tctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||| |||||||| |||||||||||||| | ||| ||||||||||||||| |||||| || ||||||||||    
T  30991429 tctcctaagagaagcttgaattacattcccctcctctcttatgttaaaatctacactttactccctcaata 30991359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 3075429 - 3075494
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||||| | ||||||||||||||||||| |||||| || ||| ||||||    
T  3075429 taagagaagcttgaattacattcccctcccctcttatgttaaaatctacactttactccttcaata 3075494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 8297756 - 8297691
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  8297756 taagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaata 8297691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 10674389 - 10674470
Alignment:
Q  4 tttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||| || ||| |||||||||| |||||||||||||| | |||| |||||||||||||| |||||| || || |||||||    
T  10674389 tttcaccctcctcccttaagagaagcttgaattacattcacctcccttcttatgttaaaatctacactttactctctcaata 10674470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 11140217 - 11140282
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||||| | ||||| ||||||||||||| |||||| || ||||||||||    
T  11140217 taagagaagcttgaattacattcccctccccccttatgttaaaatctacactttactccctcaata 11140282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 37304842 - 37304782
Alignment:
Q  24 agaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||||||| ||||| ||||||||||||||||||| |||||| || ||||||||||    
T  37304842 agaaacttgaattacgttctc-tcccctcttatgttaaaatctacactttactccctcaata 37304782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 24810210 - 24810150
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccct 80  Q
    |||||||| |||||||||||||||| ||||||||||||||||||  |||||| || |||||    
T  24810210 taagagaagcttgaattacattctcctcccctcttatgttaaaaactacactttactccct 24810150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 25954074 - 25953994
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaa 83  Q
    |||||||||  ||| ||| |||||| |||||||||||||| | ||||||||||||||||||| ||| || || ||||||||    
T  25954074 atttcactcccctcccttgagagaagcttgaattacattcacttcccctcttatgttaaaatctacgctttactccctcaa 25953994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 45489305 - 45489242
Alignment:
Q  18 cttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctc 81  Q
    |||||||||| ||||||||||||||| ||||||||| |||||||||| ||| || || ||||||    
T  45489305 cttaagagaagcttgaattacattcttatcccctctcatgttaaaatatacgctttagtccctc 45489242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 6292620 - 6292702
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | |||||||| |||||||||||| | | ||||||||||||||||||| |||||| ||  |||||||||    
T  6292620 atttcactcccctcccctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttaccccctcaata 6292702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 25485397 - 25485315
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||||| |||||||| |||||||||||| | | | ||||||||||||||||| |||| | || ||||||||||    
T  25485397 atttcactcccctctcctaagagaagcttgaattacatccccctaccctcttatgttaaaatctacattctactccctcaata 25485315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 30353950 - 30354032
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| ||| |||||| ||||||||||||||   ||||||||||| ||||||| |||||| || ||||||||||    
T  30353950 atttcactcccctcccttgagagaagcttgaattacattcctctcccctcttatattaaaatctacactttactccctcaata 30354032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 39998476 - 39998558
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||| ||| ||| |||||| ||| |||||||||||| || ||||||| |||||||| ||| || || ||||||||||    
T  39998476 atttcactctcctcccttgagagaagcttcaattacattctcttctcctcttaagttaaaatctacgctttagtccctcaata 39998558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 44147585 - 44147519
Alignment:
Q  19 ttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||||||||| ||| | ||||||||||||||||||| |||||| || ||||||||||    
T  44147585 ttaagagaagtttgaattacgttcccctcccctcttatgttaaaatatacactttactccctcaata 44147519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 3075255 - 3075299
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaat 64  Q
    |||||||| |||||||||||||| | |||||||||||||||||||    
T  3075255 taagagaagcttgaattacattcccctcccctcttatgttaaaat 3075299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 12330970 - 12331050
Alignment:
Q  1 acatttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctc 81  Q
    |||||||| ||  ||| ||||||| || ||||||||| |||||| | ||||||||||||||||| |||||| || ||||||    
T  12330970 acatttcattcccctcccttaagataagcttgaattatattctccttccctcttatgttaaaatctacactttactccctc 12331050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 22934395 - 22934463
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||||  ||| | |||||||| ||||||||| || ||| ||||||||||||||||||| ||||||    
T  22934395 atttcactcccctcccctaagagaagcttgaattagatcctcctcccctcttatgttaaaatctacact 22934463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 40791709 - 40791645
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaat 84  Q
    |||||||| |||||||| ||| | ||||||||||||| ||||||| |||||| || |||||||||    
T  40791709 taagagaagcttgaatttcatccacatcccctcttatattaaaatctacactttactccctcaat 40791645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 44283819 - 44283879
Alignment:
Q  23 gagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaa 83  Q
    ||||| |||||||||||||| | ||||||||||||||||||| ||| || || ||||||||    
T  44283819 gagaagcttgaattacattcccctcccctcttatgttaaaatctacgctttactccctcaa 44283879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 15847985 - 15848044
Alignment:
Q  26 aaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||||||||||   | | |||||||||||||||||||||| || ||||||||||    
T  15847985 aaacttgaattacattcatcttctctcttatgttaaaatttacactttactccctcaata 15848044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 24778016 - 24778059
Alignment:
Q  28 acttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||||||| |||| ||||||||||||||||||| ||||||    
T  24778016 acttgaattacactctcctcccctcttatgttaaaatatacact 24778059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 29459210 - 29459151
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctc 81  Q
    |||||| |||||||||||||| | |||||||||| |||||||| |||||| || ||||||    
T  29459210 agagaagcttgaattacattcccctcccctcttaagttaaaatctacactttagtccctc 29459151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 32904165 - 32904106
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctc 81  Q
    |||||| |||||||||||||| | ||||||||| ||||||||| ||| || |||||||||    
T  32904165 agagaagcttgaattacattcccctcccctcttgtgttaaaatctacgctttaatccctc 32904106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 32905279 - 32905216
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||| |||||||||||||| | ||||||||| ||||||||| ||| || || ||||||||||    
T  32905279 agagaagcttgaattacattcccctcccctcttgtgttaaaatctacgctttactccctcaata 32905216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 34364535 - 34364472
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||| |||||||||||||| | |||||||||| |||||||| ||| || || ||||||||||    
T  34364535 agagaagcttgaattacattcccctcccctcttaagttaaaatctacgctttagtccctcaata 34364472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 34924922 - 34924989
Alignment:
Q  18 cttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||| |||||||||| | | | ||||||||||||||||||| |||||| || || |||||||    
T  34924922 cttaagagaagcttgaattacttccccctcccctcttatgttaaaatctacactttactcgctcaata 34924989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 43764211 - 43764266
Alignment:
Q  30 ttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||||| | | |||||||||||||||||||||||| || || |||||||    
T  43764211 ttgaattacattccccttccctcttatgttaaaatttacactttactcgctcaata 43764266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 11760115 - 11760073
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||||||||||| ||| ||||||||||||||| ||||||    
T  11760115 cttgaattacattctcctcctctcttatgttaaaatatacact 11760073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 14094198 - 14094156
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||||||||| || | ||||||||||||||||||||||||||    
T  14094198 cttgaattacactcccctcccctcttatgttaaaatttacact 14094156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 17565309 - 17565227
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||||||| | |||| ||||||||||||| || |||||||||| |||||||| ||| || ||  |||||||||    
T  17565309 atttcactcacctctctttatagaagcttgaattacattttcctcccctcttaagttaaaatctacgctttagaccctcaata 17565227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 25598429 - 25598347
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | ||||| || |||||||||||| | | ||||||||||||||||||| |||||| || | ||||||||    
T  25598429 atttcactcccctcccctaagaaaagcttgaattacatccccctcccctcttatgttaaaatctacactttactacctcaata 25598347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 31739538 - 31739580
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||||||||| | |||||||||||||||||||||| ||||||    
T  31739538 cttgaattacactgtcatcccctcttatgttaaaatatacact 31739580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 34678624 - 34678666
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||||||||||||||||||| |||| ||||||||| ||||||    
T  34678624 cttgaattacattctcatcccttcttgtgttaaaatatacact 34678666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 34679896 - 34679814
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| ||| |||||| ||||||||||||   | ||||||||||||||||||| ||| || || ||||||||||    
T  34679896 atttcactccgctcccttgagagaagcttgaattacatctccctcccctcttatgttaaaatctacgctttagtccctcaata 34679814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 37837625 - 37837583
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||||||||||| ||||||||||| ||||||| ||||||    
T  37837625 cttgaattacattctcctcccctcttatcttaaaatatacact 37837583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 8442685 - 8442726
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacac 70  Q
    ||||||||||| |||| ||||||||||||||||||| |||||    
T  8442685 cttgaattacactctcttcccctcttatgttaaaatatacac 8442726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 10216089 - 10216024
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| ||||||| ||||   | ||||||||||||||||||| |||||| || ||||||||||    
T  10216089 taagagaagcttgaataacatctccctcccctcttatgttaaaatctacactttactccctcaata 10216024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 13573305 - 13573370
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||||||| ||||||| | || ||||||||  |||||| |||||| || ||||||||||    
T  13573305 taagagaaacttgaactacattcccctctcctcttataataaaatctacactttactccctcaata 13573370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 36016213 - 36016278
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| ||||||||||||||   || |||||||||||||||| |||||| || | ||||||||    
T  36016213 taagagaagcttgaattacattcctctctcctcttatgttaaaatctacactttacttcctcaata 36016278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 37872336 - 37872385
Alignment:
Q  36 tacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||| || ||||||||||||||||||| |||||| || ||||||||||    
T  37872336 tacattttcctcccctcttatgttaaaatctacactttactccctcaata 37872385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 4508538 - 4508506
Alignment:
Q  9 ctcttctctcttaagagaaacttgaattacatt 41  Q
    ||||||||||||||||||| |||||||||||||    
T  4508538 ctcttctctcttaagagaagcttgaattacatt 4508506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 11140109 - 11140165
Alignment:
Q  15 tctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||| ||| ||| |||||||||||| || | ||||||||||||||||||| ||||||    
T  11140109 tctcctaaaagatacttgaattacactcccctcccctcttatgttaaaatatacact 11140165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 13421472 - 13421512
Alignment:
Q  31 tgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||||||| ||||||| |||||||||||||||| ||||||    
T  13421472 tgaattacactctcatctcctcttatgttaaaatatacact 13421512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 40299043 - 40299103
Alignment:
Q  23 gagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaa 83  Q
    |||||||||||||||||||| | | |||||||| |||||||| ||| || || ||||||||    
T  40299043 gagaaacttgaattacattccccttccctcttaagttaaaatctacgctttagtccctcaa 40299103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 42861580 - 42861632
Alignment:
Q  33 aattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||| || | ||||||||||||||||||| |||||| || ||||||||||    
T  42861580 aattacactcccctcccctcttatgttaaaatctacactttactccctcaata 42861632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 5e-19; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 32877822 - 32877902
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaa 83  Q
    |||||| ||| ||| |||||||||  |||||||||||||||| |||||||||||||||||||||||| | |||||||||||    
T  32877822 atttcattctcctcccttaagagatgcttgaattacattctcctcccctcttatgttaaaatttacattttaatccctcaa 32877902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 4437431 - 4437495
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaat 84  Q
    |||||||| ||||||||||||||||| |||||||||||||||||| |||||| || |||||||||    
T  4437431 taagagaagcttgaattacattctcaccccctcttatgttaaaatctacactttactccctcaat 4437495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 38972567 - 38972649
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | ||||||||||||||||||||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  38972567 atttcactcccctcccctaagagaaacttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaata 38972649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 5113703 - 5113787
Alignment:
Q  1 acatttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| |||||| ||||| || ||||||||| |||||| |||  |||||||||||||| |||||| || ||||||||||    
T  5113703 acatttcactcctctctcctaagaaaagcttgaattatattctcctccattcttatgttaaaatctacactttactccctcaata 5113787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 20126132 - 20126064
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||| ||| ||| | ||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  20126132 atttcattctcctcccctaagagaaacttgaattacattcccctcccctcttatgttaaaatctacact 20126064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 34248016 - 34247951
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  34248016 taagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaata 34247951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 35899258 - 35899323
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  35899258 taagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaata 35899323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 43439248 - 43439312
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||||||| ||||| ||||||||||||| |||||| || ||||||||||    
T  43439248 taagagaagcttgaattacattctcctcccc-cttatgttaaaatctacactttactccctcaata 43439312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 552476 - 552396
Alignment:
Q  5 ttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| ||| | ||||||||  ||||||||||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  552476 ttcactctcctcccctaagagaagtttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaata 552396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 5790992 - 5790908
Alignment:
Q  1 acatttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| ||||||  |||||||||| | ||||||||||   | ||||||||||||||||||| |||||| || ||||||||||    
T  5790992 acatttcaatcttcttccttaagagaagcatgaattacatgtccctcccctcttatgttaaaatctacactttagtccctcaata 5790908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 26196849 - 26196766
Alignment:
Q  1 acatttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||| ||||| ||| | |||||||| |||||||||||||||||| |||||| |||| ||||| |||||| || ||||||||||    
T  26196849 acatttaactctcctcccctaagagaagcttgaattacattctcat-ccctctaatgtcaaaatctacactttactccctcaata 26196766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 35657465 - 35657521
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||||||| | ||||||||||||||||||| |||||| || ||||||||||    
T  35657465 cttgaattacattcccctcccctcttatgttaaaatctacactttactccctcaata 35657521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 42791602 - 42791666
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaat 84  Q
    |||||||| |||||||||||||| | ||||||||||| ||||||| |||||| || |||||||||    
T  42791602 taagagaagcttgaattacattcccctcccctcttatattaaaatctacactttactccctcaat 42791666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 13873437 - 13873500
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||| |||||||||||||| |||||||||||| |||||||| ||| || || ||||||||||    
T  13873437 agagaagcttgaattacattcccatcccctcttaagttaaaatctacgctttagtccctcaata 13873500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 14013562 - 14013625
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||| |||||||||||||| |||||||||||| |||||||| ||| || || ||||||||||    
T  14013562 agagaagcttgaattacattcccatcccctcttaagttaaaatctacgctttagtccctcaata 14013625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 31709688 - 31709625
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||| |||||||||||||| | ||| ||||||||||||||| |||||| || ||||||||||    
T  31709688 agagaagcttgaattacattcacctcctctcttatgttaaaatctacactttactccctcaata 31709625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 41521627 - 41521556
Alignment:
Q  14 ctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||| |||||||| |||||||||||||| |  |||||||||||||||||| |||||| || | ||||||||    
T  41521627 ctctcctaagagaagcttgaattacattccctccccctcttatgttaaaatctacactttacttcctcaata 41521556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 11563823 - 11563865
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  11563823 cttgaattacactctcatcccctcttatgttaaaatatacact 11563865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 16111137 - 16111071
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttaca 69  Q
    |||||||||  ||| | |||||||| |||||||||||||| | ||||||||||||||||||| ||||    
T  16111137 atttcactcccctcccctaagagaagcttgaattacattcccctcccctcttatgttaaaatctaca 16111071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 18997162 - 18997084
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctc 81  Q
    ||||||||  |||| ||| |||| ||||||||||||||||||  || || ||||||||||||||||||| || ||||||    
T  18997162 atttcacttatctcccttgagagcaacttgaattacattctccacctcttttatgttaaaatttacactttattccctc 18997084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 33146673 - 33146591
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| ||| |||||| |||||||||||||| | |||||||||| |||||||| ||| || || ||||||||||    
T  33146673 atttcactcccctcccttgagagaagcttgaattacattcccctcccctcttaagttaaaatctacgctttagtccctcaata 33146591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 44332430 - 44332388
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  44332430 cttgaattacactctcatcccctcttatgttaaaatatacact 44332388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 11051679 - 11051744
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| ||||||||| |||| | ||||| ||||||||||||| |||||| || ||||||||||    
T  11051679 taagagaagcttgaattatattcccctccccccttatgttaaaatctacactttactccctcaata 11051744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 20894233 - 20894168
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| ||||||||||||   | ||||||||||||||||||| |||||| || ||||||||||    
T  20894233 taagagaagcttgaattacatctccctcccctcttatgttaaaatctacactttactccctcaata 20894168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 40020725 - 40020645
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaa 83  Q
    |||||||||  ||| ||| |||||| |||||||||||||| | ||| ||||||||||||||| ||| || || ||||||||    
T  40020725 atttcactcccctcccttgagagaagcttgaattacattcccttcctctcttatgttaaaatctacgctttactccctcaa 40020645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 44332184 - 44332244
Alignment:
Q  4 tttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaat 64  Q
    ||||||||| ||| | |||||||| |||||||||||||  | |||||||||||||||||||    
T  44332184 tttcactctcctcccctaagagaagcttgaattacattaccctcccctcttatgttaaaat 44332244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 17829171 - 17829222
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||| |||||||||||||| | ||||| ||||||||||||| ||||||    
T  17829171 taagagaagcttgaattacattcccctccccccttatgttaaaatctacact 17829222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 24758238 - 24758289
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||| |||||||||||||||| ||||||||||  ||||||| ||||||    
T  24758238 taagagaagcttgaattacattctcctcccctcttaatttaaaatctacact 24758289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 33886412 - 33886479
Alignment:
Q  18 cttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||| |||| |||||||||||||| | | ||||||||||||||||| |||||| |||| | ||||||    
T  33886412 cttaaaagaagcttgaattacattccccttccctcttatgttaaaatctacactttaattcttcaata 33886479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 11470464 - 11470402
Alignment:
Q  1 acatttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaa 63  Q
    |||||||||||| ||| | ||| ||||||||||||||| |||   ||||||||||||||||||    
T  11470464 acatttcactctcctcccctaaaagaaacttgaattactttccactcccctcttatgttaaaa 11470402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 31597767 - 31597705
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaat 84  Q
    ||||||||||||||||||||| | | |||| |||||||||||| ||| || || |||||||||    
T  31597767 agagaaacttgaattacattcccctacccttttatgttaaaatctacgctttagtccctcaat 31597705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 37009117 - 37009179
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaat 84  Q
    |||||| ||||||||||||||   |||||| |||||||||||| ||| || ||||||||||||    
T  37009117 agagaagcttgaattacattcctctccccttttatgttaaaatctacgctttaatccctcaat 37009179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 40768956 - 40769002
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttac 68  Q
    ||||||||||||||||||||  | |||||||||| ||||||||||||    
T  40768956 agagaaacttgaattacattgccctcccctcttaagttaaaatttac 40769002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 41521750 - 41521708
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||||||||||| |||| |||||||||||||| ||||||    
T  41521750 cttgaattacattctcttcccttcttatgttaaaatatacact 41521708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 36143825 - 36143784
Alignment:
Q  30 ttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||||||||||||||  ||||||| |||||||||||||    
T  36143825 ttgaattacattctcatccattcttatggtaaaatttacact 36143784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 37330334 - 37330285
Alignment:
Q  13 tctctcttaagagaaacttgaattacattctcatcccctcttatgttaaa 62  Q
    |||||| |||||||| |||||||||||||  | |||||||||||||||||    
T  37330334 tctctcctaagagaagcttgaattacatttccctcccctcttatgttaaa 37330285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 5475181 - 5475141
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttaca 69  Q
    ||||||||||| |||| ||||||||||||||||||| ||||    
T  5475181 cttgaattacactctcctcccctcttatgttaaaatataca 5475141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 20893230 - 20893286
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| || | |||||||||| |||||||| |||||| || ||||||||||    
T  20893230 cttgaattacaatcccctcccctcttaagttaaaatatacactttactccctcaata 20893286  T

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Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 22298320 - 22298256
Alignment:
Q  7 cactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||| |||||  |||||||| ||||||||||| ||   ||||||||||||||||||| ||||||    
T  22298320 cactcctctcttctaagagaagcttgaattacactcctctcccctcttatgttaaaatatacact 22298256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 39160329 - 39160273
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||||||| | |||||||||| |||||||| ||| || || ||||||||||    
T  39160329 cttgaattacattcccctcccctcttaagttaaaatctacgctttagtccctcaata 39160273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 39208865 - 39208921
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||||||| | |||||||||| |||||||| ||| || || ||||||||||    
T  39208865 cttgaattacattcccctcccctcttaagttaaaatctacgctttagtccctcaata 39208921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 2844 - 2779
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||||| | ||||||||||||||||||| |||||| |||||||||||||    
T  2844 taagagaagcttgaattacattcccctcccctcttatgttaaaatctacactttaatccctcaata 2779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 2250 - 2292
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||||||||| || | ||||||||||||||||||||||||||    
T  2250 cttgaattacactcccctcccctcttatgttaaaatttacact 2292  T

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Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 4100624 - 4100701
Alignment:
Q  4 tttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctc 81  Q
    ||||||||  ||| |||||||||| |||||||||||||||| ||||||||||||||||||| |||||| || ||||||    
T  4100624 tttcactcccctcccttaagagaagcttgaattacattctcctcccctcttatgttaaaatctacactttactccctc 4100701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 4125986 - 4126063
Alignment:
Q  4 tttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctc 81  Q
    ||||||||  ||| |||||||||| |||||||||||||||| ||||||||||||||||||| |||||| || ||||||    
T  4125986 tttcactcccctcccttaagagaagcttgaattacattctcctcccctcttatgttaaaatctacactttactccctc 4126063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 6936489 - 6936560
Alignment:
Q  14 ctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||| |||||||| |||||||||||||||  |||||||||||||||||||||||| | || ||||||||||    
T  6936489 ctctcctaagagaagcttgaattacattcttctcccctcttatgttaaaatttacattttactccctcaata 6936560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 12767056 - 12767107
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  12767056 taagagaagcttgaattacattctcctcccctcttatgttaaaatttacact 12767107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 14873138 - 14873203
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||||| | ||||||||||||||||||| |||||| || ||||||||||    
T  14873138 taagagaagcttgaattacattcccctcccctcttatgttaaaatctacactttactccctcaata 14873203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 22268532 - 22268593
Alignment:
Q  24 agaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||| ||||||||||| |||| |||||||||||||||||||||||||| || ||||||||||    
T  22268532 agaagcttgaattacactctcctcccctcttatgttaaaatttacactttactccctcaata 22268593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 31281735 - 31281799
Alignment:
Q  21 aagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||| ||||||||||||||||||||||||||||| |||||| |||||| ||  |||||||||    
T  31281735 aagagaagcttgaattacattctcatcccctcttatgataaaatctacactttacaccctcaata 31281799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 188404 - 188322
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | |||||||| |||||||||||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  188404 atttcactcccctcccctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaata 188322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 7127628 - 7127546
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | |||||||| |||||||||||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  7127628 atttcactcccctcccctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaata 7127546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 9240962 - 9241044
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | |||||||| |||||||||||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  9240962 atttcactcccctcccctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaata 9241044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 12026168 - 12026086
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | |||||||| |||||||||||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  12026168 atttcactcccctcccctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaata 12026086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 12033088 - 12033006
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | |||||||| |||||||||||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  12033088 atttcactcccctcccctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaata 12033006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 25577172 - 25577090
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | |||||||| |||||||||||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  25577172 atttcactcccctcccctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaata 25577090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 33276380 - 33276298
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| |||||||||| ||| |||||||||| | ||||||||||||||||||| ||| || || ||||||||||    
T  33276380 atttcactcccctcccttaagagaagcttaaattacattcccctcccctcttatgttaaaatctacgctttactccctcaata 33276298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 3767700 - 3767635
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||||||||||||| | | ||||||||||||||||||| |||||| || ||||| ||||    
T  3767700 taagagaaacttgaattacatccccctcccctcttatgttaaaatctacactttactcccttaata 3767635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 31881942 - 31882025
Alignment:
Q  1 acatttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| ||| ||| ||||||||||   |||||||||||| | ||||||||||||||||||| |||||| || ||||||||||    
T  31881942 acatttcaatctcctc-cttaagagaagtatgaattacattcccctcccctcttatgttaaaatctacactttactccctcaata 31882025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 11522914 - 11522984
Alignment:
Q  14 ctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||| |||||||| |||||||||||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  11522914 ctctcctaagagaagcttgaattacatcccc-tcccctcttatgttaaaatctacactttactccctcaata 11522984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 17336951 - 17337010
Alignment:
Q  26 aaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||||||||||  || |||||||||||||||| |||||| || ||||||||||    
T  17336951 aaacttgaattacattcttctctcctcttatgttaaaatctacactttactccctcaata 17337010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 7448851 - 7448785
Alignment:
Q  18 cttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaat 84  Q
    |||||||||| | |||||||||||  | ||||||||||||||||||| |||||| || |||||||||    
T  7448851 cttaagagaagcatgaattacattaacctcccctcttatgttaaaatctacactttactccctcaat 7448785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 14306818 - 14306860
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||||||||||| ||||||||||||||||||| ||||||    
T  14306818 cttgaattacattctcctcccctcttatgttaaaatatacact 14306860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 22022322 - 22022280
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  22022322 cttgaattacactctcatcccctcttatgttaaaatatacact 22022280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 34794491 - 34794413
Alignment:
Q  5 ttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaa 83  Q
    |||||||  ||| ||| |||||||||||||||||||||   ||||||||||||||||||| ||| || || ||||||||    
T  34794491 ttcactcccctcccttgagagaaacttgaattacattcatctcccctcttatgttaaaatctactctttactccctcaa 34794413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 5916684 - 5916635
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||| |||||||||||||||| |||||||| |||||||||| ||||||    
T  5916684 agagaagcttgaattacattctcctcccctctgatgttaaaatctacact 5916635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 11794814 - 11794773
Alignment:
Q  30 ttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||||| || ||||||||||||||||||||||||||||    
T  11794814 ttgaattacactcccatcccctcttatgttaaaatttacact 11794773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 12767669 - 12767612
Alignment:
Q  14 ctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||| |||||||| ||||||||||| || | ||||||||||||||||||| ||||||    
T  12767669 ctctcctaagagaagcttgaattacactcccctcccctcttatgttaaaatatacact 12767612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 14313802 - 14313749
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctca 82  Q
    |||||||||||||| |||||||||||| |||||||| |||||| || |||||||    
T  14313802 cttgaattacattcccatcccctcttaagttaaaatctacactttagtccctca 14313749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 25527850 - 25527915
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| ||||||||||||   | ||||||||||||||||||| |||||| || ||||||||||    
T  25527850 taagagaagcttgaattacatctccctcccctcttatgttaaaatctacactttactccctcaata 25527915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 30462086 - 30462005
Alignment:
Q  4 tttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||  ||||| ||||||||  ||||||||| ||| | ||||||||||||||||||| |||||| || ||| ||||||    
T  30462086 tttcactcccctctcctaagagaagtttgaattactttcccctcccctcttatgttaaaatctacactttactccatcaata 30462005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 32113859 - 32113924
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||| ||| | ||||||||||||||||||| |||||| || ||| ||||||    
T  32113859 taagagaagcttgaattactttcccctcccctcttatgttaaaatctacactttactccttcaata 32113924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 34709347 - 34709412
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||| |   ||||||||||||||||||| |||||| || ||||||||||    
T  34709347 taagagaagcttgaattacatccctctcccctcttatgttaaaatctacactttactccctcaata 34709412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 22022076 - 22022136
Alignment:
Q  4 tttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaat 64  Q
    ||||||||| ||| | |||||||| |||||||||||||  | |||||||||||||||||||    
T  22022076 tttcactctcctcccctaagagaagcttgaattacattaccctcccctcttatgttaaaat 22022136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 2523289 - 2523226
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||| |||||||||||||| | ||||||||| ||||||||| ||| || || ||||||||||    
T  2523289 agagaagcttgaattacattcccctcccctcttgtgttaaaatctacgctttactccctcaata 2523226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 3767092 - 3767147
Alignment:
Q  30 ttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||| ||||||||||||||| |||||||| |||||| || ||| ||||||    
T  3767092 ttgaattacactctcatcccctcttaagttaaaatatacactttactccatcaata 3767147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 17312071 - 17311989
Alignment:
Q  1 acatttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaa 83  Q
    |||||| |||| |||| | |||||||| ||| |||||||| | | ||||||||||||| ||||| |||||| || ||||||||    
T  17312071 acattttactcctctcccctaagagaagctttaattacatccccctcccctcttatgtaaaaatctacactttactccctcaa 17311989  T

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Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 21802652 - 21802610
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||||||||| |||| ||||||||||||||||||| ||||||    
T  21802652 cttgaattacactctcctcccctcttatgttaaaatatacact 21802610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 34280652 - 34280570
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | |||||||| |||||||||||| | | |||||||||| |||||||| |||||| || ||||| ||||    
T  34280652 atttcactcccctcccctaagagaagcttgaattacatccccctcccctcttacgttaaaatctacactttactccctaaata 34280570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 2091791 - 2091852
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaat 64  Q
    |||||||||| ||| ||| |||||| |||||||||||||  | |||||||||| ||||||||    
T  2091791 atttcactctcctcccttgagagaagcttgaattacatttccctcccctcttaagttaaaat 2091852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 5443131 - 5443196
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||  ||||||||||| | | ||||||||||||||||||| |||| | || ||||||||||    
T  5443131 taagagaagtttgaattacatccccctcccctcttatgttaaaatctacattttactccctcaata 5443196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 6936402 - 6936443
Alignment:
Q  30 ttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||||| |||| ||||||||||||||||||| ||||||    
T  6936402 ttgaattacactctcctcccctcttatgttaaaatatacact 6936443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 16326022 - 16325977
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaattta 67  Q
    |||||| |||||||||||||| | |||||||||| |||||||||||    
T  16326022 agagaagcttgaattacattcccctcccctcttaagttaaaattta 16325977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 16349420 - 16349375
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaattta 67  Q
    |||||| |||||||||||||| | |||||||||| |||||||||||    
T  16349420 agagaagcttgaattacattcccctcccctcttaagttaaaattta 16349375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 33950329 - 33950410
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaat 84  Q
    |||||||||  ||| ||| |||||| |||||||||||||| | | |||||||| |||||||| ||| || || |||||||||    
T  33950329 atttcactcccctcccttgagagaagcttgaattacattccccttccctcttaagttaaaatctacgctttagtccctcaat 33950410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 9241587 - 9241531
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| || | |||||||||| |||||||| |||||| || ||||||||||    
T  9241587 cttgaattacactcccctcccctcttaagttaaaatatacactttactccctcaata 9241531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 11523525 - 11523469
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| || | |||||||||| |||||||| |||||| || ||||||||||    
T  11523525 cttgaattacactcccctcccctcttaagttaaaatatacactttactccctcaata 11523469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 62
Target Start/End: Original strand, 24620038 - 24620070
Alignment:
Q  30 ttgaattacattctcatcccctcttatgttaaa 62  Q
    ||||||||||||||| |||||||||||||||||    
T  24620038 ttgaattacattctcctcccctcttatgttaaa 24620070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 27923797 - 27923741
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| || | |||||||||| |||||||| |||||| || ||||||||||    
T  27923797 cttgaattacactcccctcccctcttaagttaaaatatacactttactccctcaata 27923741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 34709965 - 34709909
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| || | |||||||||| |||||||| |||||| || ||||||||||    
T  34709965 cttgaattacactcccctcccctcttaagttaaaatatacactttactccctcaata 34709909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 32221707 - 32221791
Alignment:
Q  1 acatttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| |||| |||||||||   ||||||||||||||| |||||||| |||||||||| |||||| || ||||||||||    
T  32221707 acatttcactcctctcccttaagagacgattgaattacattctcctcccctctaatgttaaaatctacactttactccctcaata 32221791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 20030024 - 20030091
Alignment:
Q  18 cttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||| |||||||||||||| | ||||||||||||||||||| |||||| |||||| ||||||    
T  20030024 cttaagagaagcttgaattacattcacctcccctcttatgttaaaatctacactttaatccttcaata 20030091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 4757101 - 4757183
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | |||||||| |||||||||||||||| ||| ||||||||||||||| |||||| || ||||||||||    
T  4757101 atttcactcccctcccctaagagaagcttgaattacattctcctccactcttatgttaaaatctacactttactccctcaata 4757183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 11055897 - 11055979
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | |||||||| |||||||||||||| | ||||||||||||||||||| |||||| || ||||||||||    
T  11055897 atttcactcccctcccctaagagaagcttgaattacattcccctcccctcttatgttaaaatctacactttactccctcaata 11055979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 48224107 - 48224025
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||| ||| ||| |||||| |||||||||||||| | ||||||||||||||||||| ||| || || ||||||||||    
T  48224107 atttcactctcctcccttgagagaagcttgaattacattcccctcccctcttatgttaaaatctactctttactccctcaata 48224025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 6293329 - 6293394
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||||| | ||||||||||||||||||| |||||| ||||| |||||||    
T  6293329 taagagaagcttgaattacattcccctcccctcttatgttaaaatctacactttaatctctcaata 6293394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 11389026 - 11388975
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||| |||||||||||||||| ||||||||||||||||||| ||||||    
T  11389026 taagagaagcttgaattacattctcctcccctcttatgttaaaatctacact 11388975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 27395030 - 27394963
Alignment:
Q  18 cttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||| |||||||||||||| | |||| |||||||||||||| |||||| || ||||||||||    
T  27395030 cttaagagaagcttgaattacattcccctcccttcttatgttaaaatctacactttactccctcaata 27394963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 40927614 - 40927681
Alignment:
Q  18 cttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||| ||||||||||||||   || |||||||||||||||| |||||| |||||||||||||    
T  40927614 cttaagagaagcttgaattacattcctctctcctcttatgttaaaatctacactttaatccctcaata 40927681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 54404186 - 54404119
Alignment:
Q  18 cttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||| ||||||||||| || | ||||||||||||||||||| |||||| || ||||||||||    
T  54404186 cttaagagaagcttgaattacactcccctcccctcttatgttaaaatctacactttactccctcaata 54404119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 291753 - 291671
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | |||||||| | |||||||||||| | |||||||||| |||||||| |||||| |||||||||||||    
T  291753 atttcactccactcccctaagagaagcatgaattacattcccctcccctcttaagttaaaatctacactttaatccctcaata 291671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 10887816 - 10887898
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | |||||||| |||||||||||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  10887816 atttcactcccctcccctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaata 10887898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 14602080 - 14601998
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||| || ||| | |||||||| |||||||||||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  14602080 atttcaccctgctcccctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaata 14601998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 16067865 - 16067783
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| ||| |||||| |||||||||||||| | |||||||||| |||||||| |||||| || ||||||||||    
T  16067865 atttcactcccctcccttgagagaagcttgaattacattcccctcccctcttaagttaaaatctacactttagtccctcaata 16067783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 44950956 - 44950874
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||| |||| |||  ||||| |||||||||||||| | ||||||||||||||||||| ||| || || ||||||||||    
T  44950956 atttcactcctctcccttgtgagaagcttgaattacattcccctcccctcttatgttaaaatctacgctttagtccctcaata 44950874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 49764596 - 49764678
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| ||| |||||| |||||||||||||||| ||||||||||||||||||| |||  | || ||||||||||    
T  49764596 atttcactcccctcccttgagagaagcttgaattacattctcctcccctcttatgttaaaatctactatttagtccctcaata 49764678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 4558155 - 4558220
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  4558155 taagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaata 4558220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 7725376 - 7725311
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttac 68  Q
    |||||||||  ||| ||| ||||||||||||||||||||  | |||||||||||||||||||||||    
T  7725376 atttcactcccctcccttgagagaaacttgaattacatttccctcccctcttatgttaaaatttac 7725311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 19546979 - 19546918
Alignment:
Q  24 agaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||| |||||||||||||||| || |||||||||||||||| |||||| || ||||||||||    
T  19546979 agaagcttgaattacattctcctcacctcttatgttaaaatctacactttactccctcaata 19546918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 22129810 - 22129875
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  22129810 taagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaata 22129875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 22524241 - 22524306
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  22524241 taagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaata 22524306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 23309573 - 23309508
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| ||||||||||||||   ||||||||||||||||||| |||||| || ||||||||||    
T  23309573 taagagaagcttgaattacattcctctcccctcttatgttaaaatctacactttactccctcaata 23309508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 24542934 - 24542869
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  24542934 taagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaata 24542869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 41586752 - 41586832
Alignment:
Q  4 tttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||| |||||||||| ||||||||||||||   ||||||||||||||||||| |||||| || || |||||||    
T  41586752 tttcactcctctc-cttaagagaagcttgaattacattcatctcccctcttatgttaaaatctacactttactcactcaata 41586832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 44499437 - 44499518
Alignment:
Q  4 tttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||  ||| |||||||||| ||||||||||||||   ||| ||||||||||||||| |||||| || ||||||||||    
T  44499437 tttcactcccctcccttaagagaagcttgaattacattcatctcctctcttatgttaaaatctacactttactccctcaata 44499518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 45241802 - 45241733
Alignment:
Q  15 tctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaat 84  Q
    |||| |||||||| |||||||||||||| | ||||||||||||||||||| | |||| || |||||||||    
T  45241802 tctcctaagagaagcttgaattacattcccctcccctcttatgttaaaatctgcactttactccctcaat 45241733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 3089856 - 3089938
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| ||| |||||| |||||||||||||| | |||||||||| |||||||| ||| || || ||||||||||    
T  3089856 atttcactcccctcccttgagagaagcttgaattacattcacctcccctcttaagttaaaatctacgctttagtccctcaata 3089938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 32737141 - 32737059
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | |||||||| |||||||||||| | | ||||||||||||||||||| |||| | || ||||||||||    
T  32737141 atttcactcccctcccctaagagaagcttgaattacatccacctcccctcttatgttaaaatctacattttactccctcaata 32737059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 11581990 - 11582055
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||||| | ||| ||||||||||||||| |||||| || ||| ||||||    
T  11581990 taagagaagcttgaattacattcccctcctctcttatgttaaaatctacactttactccttcaata 11582055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 37183201 - 37183266
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| ||||||| |||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  37183201 taagagaagcttgaataacatccccctcccctcttatgttaaaatctacactttactccctcaata 37183266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 5963181 - 5963245
Alignment:
Q  21 aagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||| |||||||||||||| | |||||||||||||||| || |||||| || ||| ||||||    
T  5963181 aagagaagcttgaattacattcccctcccctcttatgttaatatctacactttactccatcaata 5963245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 41865006 - 41865062
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| |||||| |||||||| |||||||| |||||| || ||||||||||    
T  41865006 cttgaattacactctcattccctcttaagttaaaatatacactttactccctcaata 41865062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 54876880 - 54876816
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaat 84  Q
    |||||||| |||||||||||||| | |||||||||| |||||||| |||||| || | |||||||    
T  54876880 taagagaagcttgaattacattcccctcccctcttaggttaaaatctacactttacttcctcaat 54876816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 27255314 - 27255356
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||||||||| |||| ||||||||||||||||||| ||||||    
T  27255314 cttgaattacactctcctcccctcttatgttaaaatatacact 27255356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 27395122 - 27395080
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||||||||| | ||||||||||||||||||| ||||||    
T  27395122 cttgaattacattcccctcccctcttatgttaaaatatacact 27395080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 40036443 - 40036401
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||||||||| | ||||||||||||||||||| ||||||    
T  40036443 cttgaattacattcccctcccctcttatgttaaaatatacact 40036401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 48841621 - 48841703
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||||||| |||||| |||||||||||||| | || ||||||| | |||||| ||| || || ||||||||||    
T  48841621 atttcactcccctctcttgagagaagcttgaattacattcccctctcctcttaagctaaaatctacgctttagtccctcaata 48841703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 49080656 - 49080614
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||||||||| | ||||||||||||||||||| ||||||    
T  49080656 cttgaattacattcccctcccctcttatgttaaaatatacact 49080614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 53490154 - 53490236
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| ||| |||||| ||| |||||||||||| ||| |||||| |||||||| |||||| || ||||| ||||    
T  53490154 atttcactcccctcccttgagagaagcttcaattacattctcttcctctcttaagttaaaatctacactttagtccctaaata 53490236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 1780683 - 1780618
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||| ||| ||||||||||||||| |||| |||||||||||||| || ||| || ||| ||||||    
T  1780683 taagaaaaatttgaattacattctcctcccttcttatgttaaaatctatactttactccttcaata 1780618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 8449218 - 8449268
Alignment:
Q  19 ttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||||||||||||||||||| | |||||||  |||||||||| ||||||    
T  8449218 ttaagagaaacttgaattacattcccctcccctc--atgttaaaatctacact 8449268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 19538315 - 19538254
Alignment:
Q  24 agaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||||||||||||| | || |||||| |||||||||| ||| || ||| ||||||    
T  19538315 agaaacttgaattacattctctttccttcttatattaaaatttatactttactccttcaata 19538254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 28248108 - 28248043
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| | ||||||| |||||  ||||||||||||||||||| |||||| || ||| ||||||    
T  28248108 taagagaagcatgaattatattcttctcccctcttatgttaaaatctacactatactccatcaata 28248043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 30128236 - 30128175
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaat 64  Q
    ||||||||  |||| ||| |||||| ||||||||||||||   |||||||||||||||||||    
T  30128236 atttcacttctctcccttgagagaagcttgaattacattccactcccctcttatgttaaaat 30128175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 30604798 - 30604863
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| || ||||||||||| | |||||||| |||||||| | |||| | |||||||||||||    
T  30604798 taagagaagctagaattacattcccctcccctctaatgttaaattctacaatttaatccctcaata 30604863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 41865638 - 41865573
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||  | | || |||||||||||||||| |||||| || ||||||||||    
T  41865638 taagagaagcttgaattacacccccctctcctcttatgttaaaatctacactttactccctcaata 41865573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 45307311 - 45307246
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| ||||||||| | || | |||||||||||||||||||  ||||| || ||||||||||    
T  45307311 taagagaagcttgaattatactcccctcccctcttatgttaaaatccacactttactccctcaata 45307246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 54606377 - 54606312
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||| || ||||||||||| || | ||||||||||||||||||| |||||| || ||| ||||||    
T  54606377 taagataagcttgaattacactcccctcccctcttatgttaaaatctacactttactccatcaata 54606312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 11056607 - 11056551
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| || | |||||||||| |||||||| |||||| || ||||||||||    
T  11056607 cttgaattacactcccctcccctcttaagttaaaatatacactttactccctcaata 11056551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 11397607 - 11397667
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccct 80  Q
    |||||||| ||||||||||| |  | ||||||||||||||||||| |||||| | ||||||    
T  11397607 taagagaagcttgaattacacttccctcccctcttatgttaaaatatacactctcatccct 11397667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 22130444 - 22130388
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| || | |||||||||| |||||||| |||||| || ||||||||||    
T  22130444 cttgaattacactcccctcccctcttaagttaaaatatacactttactccctcaata 22130388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 22518636 - 22518585
Alignment:
Q  20 taagagaaacttgaattaca-ttctcatcccctcttatgttaaaatttacact 71  Q
    |||||||| ||||||||||| ||||| ||||||||||||||||||| ||||||    
T  22518636 taagagaatcttgaattacacttctc-tcccctcttatgttaaaatatacact 22518585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 23308965 - 23309021
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| || | |||||||||| |||||||| |||||| || ||||||||||    
T  23308965 cttgaattacactcccctcccctcttaagttaaaatatacactttactccctcaata 23309021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 37183807 - 37183751
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| || | |||||||||| |||||||| |||||| || ||||||||||    
T  37183807 cttgaattacactcccgtcccctcttaagttaaaatatacactttactccctcaata 37183751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 10155607 - 10155689
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||||| |||||||| |||||||||||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  10155607 atttcactcccctctcctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaata 10155689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 17201915 - 17201833
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| ||| |||||| |||||||||||||||| ||||||||||||||||||| ||| || || ||||||||||    
T  17201915 atttcactcccctcccttgagagaagcttgaattacattctcctcccctcttatgttaaaatctacgctttagtccctcaata 17201833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 6233741 - 6233676
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||||||| ||||||||||||||||||| |||||| || ||| ||||||    
T  6233741 taagagaagcttgaattacattctcttcccctcttatgttaaaatctacactttactccatcaata 6233676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 7478792 - 7478857
Alignment:
Q  21 aagagaaacttgaattacattctcatcccctcttatgtt-aaaatttacactgtaatccctcaata 85  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||| |||||| || ||||||||||    
T  7478792 aagagaagcttgaattacattctcatcccctcttatgttaaaaatctacactttactccctcaata 7478857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 36897579 - 36897644
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||||  | ||||||||||||||||||| |||||| |||||||||||||    
T  36897579 taagagaagcttgaattacattaccctcccctcttatgttaaaatctacactttaatccctcaata 36897644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 55069468 - 55069404
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaat 84  Q
    |||||||| |||||||||||||| | ||||||||||||||||||| |||||| || |||||||||    
T  55069468 taagagaagcttgaattacattcccctcccctcttatgttaaaatctacactttactccctcaat 55069404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 33032279 - 33032330
Alignment:
Q  18 cttaagagaaacttgaattacattctcatcccctcttatgttaaaatttaca 69  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||| ||||    
T  33032279 cttaagagaagcttgaattacattctcatccccccttatgttaaaatctaca 33032330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 6233074 - 6232992
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | |||||||| ||||||||||||   ||||||||||||||||||||| |||||| || ||||||||||    
T  6233074 atttcactcccctcccctaagagaagcttgaattacatctccatcccctcttatgttaaaatctacactttactccctcaata 6232992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 7166049 - 7165967
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | |||||||| |||||||||||||  | ||||||||||||||||||| |||||| || ||||||||||    
T  7166049 atttcactcccctcccctaagagaagcttgaattacatttccctcccctcttatgttaaaatctacactttactccctcaata 7165967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 23308902 - 23308984
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | |||||||| |||||||||||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  23308902 atttcactcccctcccctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaata 23308984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 37423884 - 37423966
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| ||| |||||| |||||||||||||||| |||||||||| |||||||| ||| || || ||||||||||    
T  37423884 atttcactcccctcccttgagagaagcttgaattacattctcctcccctcttaagttaaaatctacgctttagtccctcaata 37423966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 55814420 - 55814498
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctc 81  Q
    |||||||||| ||| ||| |||||| ||||||||||||||||||||| |||||| ||||||| ||| || || ||||||    
T  55814420 atttcactctcctcccttgagagaagcttgaattacattctcatcccttcttattttaaaatgtactctttactccctc 55814498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 616086 - 616021
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  616086 taagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaata 616021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 13395310 - 13395375
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  13395310 taagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctcaata 13395375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 19313967 - 19313902
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||  ||||||||||||| ||||||| ||||||||||||| |||||| || ||||||||||    
T  19313967 taagagaagtttgaattacattcacatccccccttatgttaaaatctacactttactccctcaata 19313902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 36651224 - 36651159
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||||||||||||||  | ||| ||||||||||||||| |||||| ||||| |||||||    
T  36651224 taagagaaacttgaattacatttccctccactcttatgttaaaatctacactttaatcgctcaata 36651159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 796487 - 796569
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | |||||||| ||||||||||||   | ||||||||||||||||||| |||||| || ||||||||||    
T  796487 atttcactcccctcccctaagagaagcttgaattacatctccctcccctcttatgttaaaatctacactttactccctcaata 796569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 8192961 - 8192879
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | |||||||| ||||||||||||   | ||||||||||||||||||| |||||| || ||||||||||    
T  8192961 atttcactcccctcccctaagagaagcttgaattacatctccctcccctcttatgttaaaatctacactttactccctcaata 8192879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 19313372 - 19313414
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  19313372 cttgaattacactctcatcccctcttatgttaaaatatacact 19313414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 23272508 - 23272590
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | |||||||| |||||||||||| | | ||||||||||||||||||| |||||| || ||||| ||||    
T  23272508 atttcactcccctcccctaagagaagcttgaattacatccccctcccctcttatgttaaaatctacactttactccctaaata 23272590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 37423247 - 37423329
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||||| | |||||| ||||||||||||||   ||||||||||||||||||| ||| || || ||||||||||    
T  37423247 atttcactcccctctcctgagagaagcttgaattacattcctctcccctcttatgttaaaatctacgctttagtccctcaata 37423329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 46076945 - 46076863
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||| |||| ||| |||||| | |||||||||||||| || |||||||||||||||| | || | || ||||||||||    
T  46076945 atttcactcctctcccttgagagaagcatgaattacattctcctctcctcttatgttaaaatctgcattttactccctcaata 46076863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 46095527 - 46095593
Alignment:
Q  20 taagagaaacttgaattacattctca-tcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||||| |  ||||||||||||||||||| |||||| || ||||||||||    
T  46095527 taagagaagcttgaattacattccccctcccctcttatgttaaaatctacactttactccctcaata 46095593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 50824732 - 50824814
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| ||| |||||| |||||||||||||| | |||||||||| |||||||| ||| || || ||||||||||    
T  50824732 atttcactcccctcccttgagagaagcttgaattacattcccctcccctcttaagttaaaatctacgctttagtccctcaata 50824814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 4950566 - 4950485
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaat 84  Q
    |||||||||  ||| ||| |||||| |||||||||||||| | |||||||||| |||||||| ||| || || |||||||||    
T  4950566 atttcactcccctcccttgagagaagcttgaattacattcccctcccctcttaagttaaaatctacgctttagtccctcaat 4950485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 9784707 - 9784772
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| ||||||||||||||   ||||||||||||||||||| |||||| || ||| ||||||    
T  9784707 taagagaatcttgaattacattcatctcccctcttatgttaaaatctacactttactccttcaata 9784772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 16191772 - 16191837
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||||| | |||||||||||  |||||| |||||| || ||||||||||    
T  16191772 taagagaagcttgaattacattcccctcccctcttataataaaatctacactttactccctcaata 16191837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 17729632 - 17729696
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||||| | ||||| ||||||||||||| |||||| || ||||||||||    
T  17729632 taagagaagcttgaattacattcccctcccc-cttatgttaaaatctacactttactccctcaata 17729696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 21037905 - 21037840
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| ||||||||||||| |  | ||||||||||||||||| |||||| || ||||||||||    
T  21037905 taagagaagcttgaattacatttttcttccctcttatgttaaaatctacactttactccctcaata 21037840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 47931182 - 47931121
Alignment:
Q  24 agaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||| |||||||||||||| | ||||||||||||||||||| |||  | |||||||||||||    
T  47931182 agaagcttgaattacattcgcctcccctcttatgttaaaatctacggtttaatccctcaata 47931121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 8138963 - 8138895
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||||  ||| ||||| |||| |||||||||||||||| |||||||||| || ||||| ||||||    
T  8138963 atttcactcccctcccttaatagaagcttgaattacattctcctcccctcttaagtcaaaatctacact 8138895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 35854202 - 35854118
Alignment:
Q  1 acatttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||||  ||| ||| |||||| |||||||||||||| | | ||||||||||||| ||| ||| || || ||||||||||    
T  35854202 acatttcactcccctcccttgagagaagcttgaattacattccccttccctcttatgttagaatctacgctttactccctcaata 35854118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 45847256 - 45847320
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaat 84  Q
    |||||||| || ||||||||||| | ||||||||||||||||||| |||||| || || ||||||    
T  45847256 taagagaagctggaattacattcccctcccctcttatgttaaaatctacactttactcactcaat 45847320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 3690021 - 3690068
Alignment:
Q  15 tctcttaagagaaacttgaattacattctcatcccctcttatgttaaa 62  Q
    |||||||||||||| ||||||||||||||| | ||||||| |||||||    
T  3690021 tctcttaagagaaatttgaattacattctctttccctcttttgttaaa 3690068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 13482751 - 13482692
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctc 81  Q
    |||||| |||||||||||||| | ||||||||||||||||||| ||| || || ||||||    
T  13482751 agagaagcttgaattacattcccctcccctcttatgttaaaatctactctttactccctc 13482692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 25009511 - 25009574
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||| |||||||||||||| | |||||||||| |||||||| ||| || || ||||||||||    
T  25009511 agagaagcttgaattacattcccctcccctcttaagttaaaatctacgctttagtccctcaata 25009574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 65
Target Start/End: Complemental strand, 28464856 - 28464821
Alignment:
Q  30 ttgaattacattctcatcccctcttatgttaaaatt 65  Q
    |||||||||| |||||||||||||||||||||||||    
T  28464856 ttgaattacaatctcatcccctcttatgttaaaatt 28464821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 35667708 - 35667645
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||| |||||||||||||| | |||||||||| |||||||| ||| || || ||||||||||    
T  35667708 agagaagcttgaattacattcccctcccctcttaagttaaaatctacgctttagtccctcaata 35667645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 44665132 - 44665069
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||| |||||||||||||  | ||||| ||||||||||||| |||||| || ||||||||||    
T  44665132 agagaagcttgaattacatttccctccccccttatgttaaaatctacactttactccctcaata 44665069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 51019669 - 51019720
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||  ||||||||||| |||| ||||||||||||||||||| ||||||    
T  51019669 taagagatgcttgaattacactctcctcccctcttatgttaaaatatacact 51019720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 43
Target Start/End: Original strand, 10519273 - 10519303
Alignment:
Q  13 tctctcttaagagaaacttgaattacattct 43  Q
    |||||||||||||||||||||||||||||||    
T  10519273 tctctcttaagagaaacttgaattacattct 10519303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 13482210 - 13482252
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||||||||| |||| ||||||||||||||||||| ||||||    
T  13482210 cttgaattacactctcctcccctcttatgttaaaatatacact 13482252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 13771745 - 13771787
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||||||||| | |||||||||||||||||||||| ||||||    
T  13771745 cttgaattacactttcatcccctcttatgttaaaatatacact 13771787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 18362183 - 18362225
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaat 64  Q
    |||||| ||||| |||||||||| |||||||||||||||||||    
T  18362183 agagaagcttgagttacattctcctcccctcttatgttaaaat 18362225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 23721484 - 23721563
Alignment:
Q  4 tttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||| ||| | |||||||| ||||||||||||  || ||||| ||||||||||||  |||||| || ||||||||||    
T  23721484 tttcactctcctcccctaagagaagcttgaattacat--tcctccccccttatgttaaaacctacactttactccctcaata 23721563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 25010105 - 25010063
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||||||||| |||| ||||||||||||||||||| ||||||    
T  25010105 cttgaattacactctcctcccctcttatgttaaaatatacact 25010063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 36600744 - 36600702
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaat 64  Q
    |||||| ||||| |||||||||| |||||||||||||||||||    
T  36600744 agagaagcttgagttacattctcctcccctcttatgttaaaat 36600702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 37424494 - 37424452
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||||||||| | ||||||||||||||||||| ||||||    
T  37424494 cttgaattacattcccctcccctcttatgttaaaatatacact 37424452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 54092297 - 54092359
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaat 84  Q
    |||||| |||||||||||||||| |||||| | |||||||||| ||| || || |||||||||    
T  54092297 agagaagcttgaattacattctcctcccctttcatgttaaaatctacgctttagtccctcaat 54092359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 7851834 - 7851899
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||| ||||||| | || |||||||||||||||| |||||| || ||| ||||||    
T  7851834 taagagaagcttgaactacattcccctctcctcttatgttaaaatctacactttactccatcaata 7851899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 12251307 - 12251242
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||| | | |||||||||||||||||||  ||| | || ||||||||||    
T  12251307 taagagaagcttgaattacatccccctcccctcttatgttaaaatccacattttactccctcaata 12251242  T

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Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 28464320 - 28464381
Alignment:
Q  24 agaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||| |||||||||||||| | | ||||||||||||||||| ||| || || ||||||||||    
T  28464320 agaagcttgaattacattccccttccctcttatgttaaaatctacgctttagtccctcaata 28464381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 30192537 - 30192578
Alignment:
Q  30 ttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||||| |||| ||||||||||||||||||| ||||||    
T  30192537 ttgaattacactctcctcccctcttatgttaaaatatacact 30192578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 32448397 - 32448458
Alignment:
Q  24 agaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||| ||||||||| | || | ||||||||||||||||||| |||||| || ||||||||||    
T  32448397 agaagcttgaattaaactcccctcccctcttatgttaaaatctacactttactccctcaata 32448458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 37708896 - 37708961
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||||| | ||||||||| ||||||||| ||| || || ||| ||||||    
T  37708896 taagagaagcttgaattacattcccctcccctcttgtgttaaaatctaccctttactccatcaata 37708961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 38720666 - 38720625
Alignment:
Q  30 ttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||||| |||||||| ||||||||||||||| ||||||    
T  38720666 ttgaattacactctcatcctctcttatgttaaaatatacact 38720625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 51267807 - 51267856
Alignment:
Q  36 tacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||| | ||||||||||||||||||| |||||| || ||||||||||    
T  51267807 tacattcccctcccctcttatgttaaaatctacactttattccctcaata 51267856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 55139472 - 55139532
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctc 81  Q
    |||||||| |||||||||||||| | ||||| ||||||||||||| |||||| || ||||||    
T  55139472 taagagaagcttgaattacattcccctcccc-cttatgttaaaatctacactttactccctc 55139532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 7165423 - 7165479
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| || | |||||||||| |||||||| |||||| || ||||||||||    
T  7165423 cttgaattacactcccctcccctcttaagttaaaatatacactttactccctcaata 7165479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 7797069 - 7797129
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctca 82  Q
    |||||| |||||||||||||| | |||||||||| | |||||| |||||| || |||||||    
T  7797069 agagaagcttgaattacattcccctcccctcttaaggtaaaatctacactttagtccctca 7797129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 12250701 - 12250757
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| || | |||||||||| |||||||| |||||| || ||||||||||    
T  12250701 cttgaattacactcccctcccctcttaagttaaaatatacactttactccctcaata 12250757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 13392799 - 13392743
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| || | |||||||||| |||||||| |||||| || ||||||||||    
T  13392799 cttgaattacactcccctcccctcttaagttaaaatatacactttactccctcaata 13392743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 13395938 - 13395882
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| || | |||||||||| |||||||| |||||| || ||||||||||    
T  13395938 cttgaattacactcccctcccctcttaagttaaaatatacactttactccctcaata 13395882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 13772429 - 13772389
Alignment:
Q  30 ttgaattacattctcatcccctcttatgttaaaatttacac 70  Q
    |||||||||| |||||||| ||||||||||||||| |||||    
T  13772429 ttgaattacactctcatcctctcttatgttaaaatatacac 13772389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 21037315 - 21037367
Alignment:
Q  19 ttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||||||| ||||||||||| || | ||| ||||||||||||||| ||||||    
T  21037315 ttaagagaagcttgaattacactcccctcctctcttatgttaaaatatacact 21037367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 23265832 - 23265776
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| |||| |||||||||| |||||||| |||||| ||  |||||||||    
T  23265832 cttgaattacactctcttcccctcttaagttaaaatatacactttaccccctcaata 23265776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 29979682 - 29979598
Alignment:
Q  1 acatttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||||| ||| | ||| | || |||||||| |||||   | ||||||||||||||||| |||||| || ||||||||||    
T  29979682 acatttcactctcctcccctaataaaagcttgaattgcattcatcttccctcttatgttaaaatctacactttactccctcaata 29979598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 46096167 - 46096111
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| || | |||||||||| |||||||| |||||| || ||||||||||    
T  46096167 cttgaattacactcccttcccctcttaagttaaaatatacactttactccctcaata 46096111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 46138668 - 46138612
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||||| || | |||||||||| |||||||| |||||| || ||||||||||    
T  46138668 cttgaattacactcccttcccctcttaagttaaaatatacactttactccctcaata 46138612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 49702496 - 49702560
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaat 84  Q
    |||||||| |||||||||||||| | |||||||||  |||||||| |||||| || || ||||||    
T  49702496 taagagaagcttgaattacattcccctcccctctttcgttaaaatctacactttactctctcaat 49702560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 12829 - 12748
Alignment:
Q  4 tttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||| |||||||||| ||||||||| |||||| ||||  ||||||||||||| |||||| || ||||||||||    
T  12829 tttcactcatctcacttaagagaagcttgaattatattctcctccctccttatgttaaaatctacactttactccctcaata 12748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 351907 - 351825
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||| |||   |||||||| | |||||||||||||| ||||||||||||||||||| |||| | || ||||||||||    
T  351907 atttcactctcctcctctaagagaagcctgaattacattctcctcccctcttatgttaaaatctacattttactccctcaata 351825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 17205 - 17154
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||| ||||||||||| || ||||||||||||||||||||| ||||||    
T  17205 taagagaagcttgaattacactcacatcccctcttatgttaaaatatacact 17154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 16589 - 16657
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||||||  ||| ||||| |||| |||||||||||||| | |||||||||| || ||||| ||||||    
T  16589 atttcactcccctcccttaatagaagcttgaattacattcccctcccctcttaagtcaaaatctacact 16657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 421881 - 421822
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctc 81  Q
    |||||| |||||||||||||| ||||||||||||||||||||| ||| || || ||||||    
T  421881 agagaagcttgaattacattcccatcccctcttatgttaaaatctactctttactccctc 421822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 14153 - 14235
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||||| | || ||| |||||| |||||||||||||||| | |||||||||||| |||| ||||||  | ||||||||||    
T  14153 atttcactcctatcccttgagagaagcttgaattacattctccttccctcttatgttcaaatctacacttaagtccctcaata 14235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 19617 - 19535
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||||  ||| | |||||||| ||||||||||||   | ||||||||||||||||||| |||||| || ||||||||||    
T  19617 atttcactcccctcccctaagagaagcttgaattacatctccctcccctcttatgttaaaatctacactttactccctcaata 19535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2113 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold2113
Description:

Target: scaffold2113; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 846 - 911
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| |||||||||||  | | ||||||||||||||||||| |||||| || ||||||||||    
T  846 taagagaagcttgaattacacccccctcccctcttatgttaaaatctacactttagtccctcaata 911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 10092 - 10043
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    |||||| |||||||||||||||  ||||||||||||||||||| ||||||    
T  10092 agagaagcttgaattacattcttttcccctcttatgttaaaatctacact 10043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 10697 - 10778
Alignment:
Q  3 atttcactcttctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaat 84  Q
    |||||||||  ||| ||| |||||| |||||||||||||| | |||||| |||||||||||| ||| || || |||||||||    
T  10697 atttcactcccctcccttgagagaagcttgaattacattcccctccccttttatgttaaaatctacgctttagtccctcaat 10778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 3522 - 3594
Alignment:
Q  13 tctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||| ||| |||||| |||||| ||||||| | |||||||||| |||||||| ||| || |||||||||||||    
T  3522 tctcccttgagagaagcttgaactacattcccctcccctcttaagttaaaatctacgctttaatccctcaata 3594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1192 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1192
Description:

Target: scaffold1192; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 275 - 346
Alignment:
Q  14 ctctcttaagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    ||||||| |||||| |||||||||||||||  |||||||||| |||||||| ||| || || ||| ||||||    
T  275 ctctcttgagagaagcttgaattacattcttctcccctcttaagttaaaatctacgctttagtccatcaata 346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 26956 - 26893
Alignment:
Q  22 agagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||| |||| ||||||||||| ||||||||||||||||||| |||  | ||| |||||||||    
T  26956 agagaagcttggattacattctcctcccctcttatgttaaaatctacggtttaacccctcaata 26893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 59287 - 59329
Alignment:
Q  29 cttgaattacattctcatcccctcttatgttaaaatttacact 71  Q
    ||||||||||| |||| ||||||||||||||||||| ||||||    
T  59287 cttgaattacactctcctcccctcttatgttaaaatatacact 59329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 32802 - 32867
Alignment:
Q  20 taagagaaacttgaattacattctcatcccctcttatgttaaaatttacactgtaatccctcaata 85  Q
    |||||||| ||||||||||||   | ||||||||||||||||||| |||||| || ||| ||||||    
T  32802 taagagaagcttgaattacatctccctcccctcttatgttaaaatctacactttactccgtcaata 32867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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