View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1701_low_52 (Length: 201)

Name: NF1701_low_52
Description: NF1701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1701_low_52
NF1701_low_52
[»] chr6 (48 HSPs)
chr6 (1-71)||(31881871-31881941)
chr6 (1-80)||(34280655-34280734)
chr6 (1-71)||(188407-188477)
chr6 (1-71)||(21801969-21802039)
chr6 (3-71)||(12026173-12026241)
chr6 (1-71)||(5443041-5443111)
chr6 (1-71)||(7127631-7127701)
chr6 (1-71)||(14313823-14313893)
chr6 (3-71)||(12033093-12033161)
chr6 (1-71)||(11522830-11522900)
chr6 (1-71)||(14873048-14873118)
chr6 (1-71)||(25527760-25527830)
chr6 (8-71)||(10702301-10702364)
chr6 (1-71)||(2091718-2091788)
chr6 (1-71)||(9240889-9240959)
chr6 (1-51)||(12693896-12693946)
chr6 (1-71)||(16326044-16326114)
chr6 (1-71)||(16349442-16349512)
chr6 (1-71)||(25577175-25577245)
chr6 (1-71)||(32003837-32003906)
chr6 (1-71)||(32113769-32113839)
chr6 (1-67)||(33950260-33950326)
chr6 (1-71)||(2523311-2523381)
chr6 (1-71)||(34250093-34250162)
chr6 (1-71)||(34794496-34794566)
chr6 (1-73)||(4100543-4100620)
chr6 (4-71)||(11794744-11794811)
chr6 (1-71)||(6936405-6936475)
chr6 (1-71)||(17312072-17312142)
chr6 (1-73)||(4125905-4125982)
chr6 (1-71)||(3767720-3767790)
chr6 (1-71)||(7448869-7448934)
chr6 (1-51)||(24619958-24620008)
chr6 (1-51)||(32522477-32522527)
chr6 (1-38)||(34709291-34709328)
chr6 (19-71)||(12766977-12767029)
chr6 (27-71)||(12767606-12767650)
chr6 (27-71)||(21802604-21802648)
chr6 (16-71)||(32130967-32131021)
chr6 (14-77)||(33266717-33266779)
chr6 (1-71)||(22022002-22022072)
chr6 (1-51)||(30462090-30462140)
chr6 (6-71)||(33276387-33276452)
chr6 (27-71)||(2522699-2522743)
chr6 (27-71)||(14313222-14313266)
chr6 (1-73)||(16852251-16852321)
chr6 (27-71)||(22022274-22022318)
chr6 (1-52)||(31281662-31281714)
[»] chr8 (70 HSPs)
chr8 (1-79)||(13422040-13422118)
chr8 (1-71)||(32905301-32905371)
chr8 (1-71)||(14363808-14363878)
chr8 (1-71)||(22934322-22934392)
chr8 (1-71)||(40791729-40791799)
chr8 (1-76)||(8297776-8297851)
chr8 (1-80)||(44283717-44283796)
chr8 (1-71)||(10216109-10216179)
chr8 (1-79)||(13440110-13440188)
chr8 (1-71)||(17565312-17565382)
chr8 (1-71)||(25485400-25485470)
chr8 (1-71)||(29636360-29636430)
chr8 (1-71)||(31846480-31846550)
chr8 (1-51)||(44746813-44746863)
chr8 (1-71)||(4855291-4855361)
chr8 (1-71)||(11759421-11759491)
chr8 (1-71)||(14880162-14880232)
chr8 (1-71)||(29459232-29459302)
chr8 (1-71)||(32904193-32904263)
chr8 (1-71)||(39998403-39998473)
chr8 (1-71)||(40298952-40299022)
chr8 (1-51)||(41262738-41262788)
chr8 (6-71)||(3075339-3075404)
chr8 (6-71)||(11140127-11140192)
chr8 (3-71)||(6292547-6292615)
chr8 (1-61)||(34364557-34364617)
chr8 (4-71)||(8437930-8437997)
chr8 (1-71)||(6099371-6099441)
chr8 (1-71)||(8442689-8442759)
chr8 (1-71)||(26928221-26928291)
chr8 (1-51)||(34923894-34923944)
chr8 (5-71)||(41311703-41311769)
chr8 (1-71)||(43764111-43764181)
chr8 (6-71)||(3075165-3075230)
chr8 (1-73)||(14093512-14093584)
chr8 (1-52)||(24810230-24810281)
chr8 (1-51)||(13573235-13573285)
chr8 (5-71)||(24778021-24778087)
chr8 (1-51)||(33972352-33972402)
chr8 (1-71)||(34679899-34679968)
chr8 (1-51)||(37265546-37265596)
chr8 (2-51)||(8628026-8628075)
chr8 (1-73)||(12330897-12330969)
chr8 (33-77)||(24809610-24809654)
chr8 (7-71)||(25598437-25598501)
chr8 (1-60)||(36016133-36016193)
chr8 (1-71)||(17496900-17496969)
chr8 (1-71)||(37837551-37837621)
chr8 (33-77)||(10215479-10215523)
chr8 (27-71)||(14094150-14094194)
chr8 (27-71)||(17564701-17564745)
chr8 (27-71)||(41312380-41312424)
chr8 (12-51)||(21304016-21304055)
chr8 (16-51)||(31739562-31739597)
chr8 (32-71)||(32903646-32903685)
chr8 (8-71)||(37304873-37304936)
chr8 (25-71)||(3075964-3076010)
chr8 (3-49)||(3813943-3813989)
chr8 (9-51)||(30353897-30353939)
chr8 (1-43)||(42166631-42166673)
chr8 (33-71)||(44284356-44284394)
chr8 (30-71)||(5872740-5872781)
chr8 (2-51)||(10674335-10674384)
chr8 (33-74)||(42861577-42861618)
chr8 (5-50)||(44147609-44147654)
chr8 (35-75)||(3940225-3940265)
chr8 (27-71)||(11141061-11141105)
chr8 (33-73)||(22935980-22936020)
chr8 (31-71)||(37266146-37266186)
chr8 (1-73)||(40133488-40133560)
[»] chr3 (90 HSPs)
chr3 (1-78)||(22129713-22129790)
chr3 (1-71)||(18365254-18365324)
chr3 (1-76)||(11055819-11055894)
chr3 (1-71)||(3089783-3089853)
chr3 (1-71)||(4558065-4558135)
chr3 (1-71)||(10887743-10887813)
chr3 (1-71)||(13625878-13625948)
chr3 (1-71)||(37183111-37183181)
chr3 (1-71)||(40974069-40974139)
chr3 (1-71)||(1263032-1263102)
chr3 (5-71)||(1763676-1763742)
chr3 (1-71)||(2756580-2756650)
chr3 (1-71)||(5963090-5963160)
chr3 (1-71)||(14602083-14602153)
chr3 (1-71)||(32737144-32737214)
chr3 (1-71)||(49080582-49080652)
chr3 (1-68)||(27392964-27393030)
chr3 (1-71)||(4757028-4757098)
chr3 (1-71)||(11344724-11344794)
chr3 (1-51)||(11581889-11581939)
chr3 (1-71)||(23309593-23309663)
chr3 (1-71)||(27255947-27256017)
chr3 (1-71)||(40927526-40927596)
chr3 (1-71)||(41865658-41865727)
chr3 (1-71)||(48224110-48224180)
chr3 (1-71)||(49764523-49764593)
chr3 (2-71)||(27395049-27395118)
chr3 (6-71)||(54606402-54606467)
chr3 (1-68)||(20612052-20612119)
chr3 (1-71)||(22524151-22524221)
chr3 (1-51)||(40035790-40035840)
chr3 (1-71)||(48841548-48841618)
chr3 (27-88)||(17764961-17765021)
chr3 (27-88)||(19066281-19066341)
chr3 (1-77)||(19538339-19538415)
chr3 (1-73)||(45307331-45307402)
chr3 (1-49)||(54404204-54404252)
chr3 (1-68)||(44950959-44951026)
chr3 (1-71)||(1363415-1363485)
chr3 (1-71)||(7725379-7725449)
chr3 (9-71)||(14601006-14601068)
chr3 (1-75)||(18480125-18480199)
chr3 (1-71)||(25259911-25259981)
chr3 (1-51)||(27397490-27397540)
chr3 (1-71)||(27638508-27638578)
chr3 (1-71)||(32221636-32221706)
chr3 (1-51)||(32373349-32373399)
chr3 (1-71)||(47794016-47794086)
chr3 (2-71)||(6293239-6293308)
chr3 (1-50)||(10689435-10689484)
chr3 (1-69)||(24542954-24543023)
chr3 (27-71)||(11345358-11345402)
chr3 (27-71)||(18364663-18364707)
chr3 (27-71)||(54605795-54605839)
chr3 (12-71)||(291767-291826)
chr3 (1-51)||(41586700-41586748)
chr3 (25-71)||(1262430-1262476)
chr3 (1-51)||(16067868-16067918)
chr3 (1-71)||(19345278-19345347)
chr3 (1-47)||(27517191-27517237)
chr3 (5-71)||(32255702-32255768)
chr3 (25-71)||(44500040-44500086)
chr3 (1-55)||(45241816-45241870)
chr3 (5-71)||(54876904-54876970)
chr3 (27-71)||(3090417-3090461)
chr3 (1-45)||(30128239-30128283)
chr3 (5-73)||(30604706-30604774)
chr3 (27-71)||(40036395-40036439)
chr3 (27-71)||(41587310-41587354)
chr3 (27-71)||(49765128-49765172)
chr3 (27-71)||(54403592-54403636)
chr3 (1-71)||(10592767-10592838)
chr3 (1-51)||(19547003-19547053)
chr3 (5-55)||(20096110-20096160)
chr3 (25-71)||(30605343-30605389)
chr3 (33-71)||(32222095-32222133)
chr3 (1-71)||(33979254-33979324)
chr3 (1-71)||(37973471-37973541)
chr3 (33-71)||(48842028-48842065)
chr3 (1-38)||(5984912-5984949)
chr3 (18-71)||(20612099-20612152)
chr3 (27-71)||(1364051-1364095)
chr3 (33-73)||(10888409-10888449)
chr3 (27-71)||(13623208-13623252)
chr3 (27-71)||(32255081-32255125)
chr3 (27-71)||(40974697-40974741)
chr3 (2-38)||(44499396-44499432)
chr3 (27-71)||(45241234-45241278)
chr3 (27-71)||(53329364-53329408)
chr3 (27-71)||(53333042-53333086)
[»] chr5 (59 HSPs)
chr5 (1-71)||(20183391-20183461)
chr5 (1-75)||(36742555-36742629)
chr5 (2-71)||(19408570-19408639)
chr5 (1-71)||(4877348-4877418)
chr5 (1-71)||(9017678-9017748)
chr5 (1-71)||(37334561-37334631)
chr5 (1-71)||(37658048-37658118)
chr5 (1-71)||(1199718-1199788)
chr5 (1-71)||(21639049-21639119)
chr5 (1-71)||(27028614-27028684)
chr5 (1-71)||(32458486-32458556)
chr5 (1-71)||(35751547-35751617)
chr5 (1-71)||(15175236-15175306)
chr5 (1-67)||(20570801-20570867)
chr5 (1-51)||(27979873-27979923)
chr5 (1-71)||(31476938-31477008)
chr5 (1-71)||(6031322-6031392)
chr5 (1-71)||(6048016-6048086)
chr5 (1-71)||(9118866-9118936)
chr5 (4-69)||(1405570-1405635)
chr5 (26-71)||(22731058-22731103)
chr5 (1-73)||(5138328-5138399)
chr5 (2-71)||(32020495-32020566)
chr5 (1-72)||(40027473-40027544)
chr5 (1-71)||(8572730-8572800)
chr5 (1-51)||(15144463-15144513)
chr5 (1-71)||(18524337-18524407)
chr5 (1-71)||(20540331-20540401)
chr5 (1-47)||(20691771-20691817)
chr5 (1-71)||(24625468-24625538)
chr5 (1-63)||(24763391-24763453)
chr5 (1-71)||(42598961-42599031)
chr5 (2-71)||(13280121-13280190)
chr5 (18-71)||(20570159-20570212)
chr5 (1-47)||(4054781-4054827)
chr5 (1-71)||(13686595-13686665)
chr5 (1-51)||(17967870-17967920)
chr5 (1-51)||(30782764-30782814)
chr5 (5-71)||(40957392-40957458)
chr5 (34-71)||(15175878-15175915)
chr5 (1-38)||(16614193-16614230)
chr5 (1-38)||(36762757-36762794)
chr5 (27-71)||(4717272-4717316)
chr5 (27-71)||(27979262-27979306)
chr5 (27-71)||(36737448-36737492)
chr5 (1-51)||(17780987-17781038)
chr5 (1-71)||(38498000-38498073)
chr5 (5-71)||(5345109-5345175)
chr5 (1-71)||(14594716-14594786)
chr5 (1-51)||(20259384-20259434)
chr5 (4-38)||(30920586-30920620)
chr5 (33-78)||(1198455-1198500)
chr5 (27-68)||(20570192-20570233)
chr5 (1-53)||(3933355-3933407)
chr5 (1-73)||(5701067-5701139)
chr5 (27-71)||(8573348-8573392)
chr5 (1-64)||(10688235-10688296)
chr5 (27-71)||(20184013-20184057)
chr5 (27-71)||(36762145-36762189)
[»] chr4 (95 HSPs)
chr4 (1-71)||(35667257-35667327)
chr4 (1-73)||(37423809-37423881)
chr4 (4-71)||(17722781-17722848)
chr4 (1-67)||(4950569-4950635)
chr4 (1-71)||(6233077-6233147)
chr4 (1-71)||(7796977-7797047)
chr4 (1-71)||(8192964-8193034)
chr4 (1-71)||(10155534-10155604)
chr4 (1-71)||(16960236-16960306)
chr4 (1-71)||(19313987-19314057)
chr4 (1-71)||(26705643-26705713)
chr4 (1-71)||(33047203-33047273)
chr4 (1-71)||(35667730-35667800)
chr4 (1-71)||(44665159-44665229)
chr4 (1-71)||(796414-796484)
chr4 (1-71)||(13395220-13395290)
chr4 (1-71)||(30192540-30192610)
chr4 (1-71)||(37708806-37708876)
chr4 (1-71)||(45847166-45847236)
chr4 (1-71)||(46095437-46095507)
chr4 (1-71)||(47030456-47030526)
chr4 (1-71)||(721353-721423)
chr4 (1-71)||(23308829-23308899)
chr4 (1-71)||(26809020-26809090)
chr4 (6-71)||(8138971-8139036)
chr4 (2-71)||(36651244-36651313)
chr4 (1-73)||(36897489-36897559)
chr4 (1-74)||(54092203-54092275)
chr4 (12-71)||(6233771-6233830)
chr4 (1-71)||(755500-755570)
chr4 (1-71)||(7166052-7166122)
chr4 (1-71)||(13482773-13482843)
chr4 (1-51)||(13771769-13771819)
chr4 (1-51)||(17729562-17729612)
chr4 (1-71)||(28464232-28464302)
chr4 (1-71)||(33032191-33032261)
chr4 (5-71)||(35667544-35667610)
chr4 (1-71)||(37423174-37423244)
chr4 (3-50)||(25008272-25008319)
chr4 (5-71)||(616109-616175)
chr4 (1-51)||(9784637-9784687)
chr4 (34-76)||(17723426-17723468)
chr4 (1-71)||(23721411-23721480)
chr4 (1-51)||(49621321-49621371)
chr4 (1-71)||(50824659-50824729)
chr4 (1-51)||(55069488-55069538)
chr4 (1-71)||(56310041-56310110)
chr4 (1-53)||(29979683-29979735)
chr4 (1-73)||(32448304-32448375)
chr4 (27-71)||(36898099-36898143)
chr4 (27-71)||(55068874-55068918)
chr4 (1-48)||(35854203-35854250)
chr4 (1-76)||(55139377-55139452)
chr4 (5-71)||(4649678-4649743)
chr4 (1-47)||(12251326-12251372)
chr4 (1-59)||(26619513-26619570)
chr4 (77-111)||(32930083-32930117)
chr4 (1-51)||(37735453-37735503)
chr4 (1-51)||(42074404-42074454)
chr4 (1-71)||(47931204-47931274)
chr4 (1-71)||(49702407-49702477)
chr4 (1-77)||(36408524-36408601)
chr4 (1-77)||(36422690-36422767)
chr4 (1-50)||(46490096-46490145)
chr4 (27-71)||(7797613-7797657)
chr4 (27-71)||(13482214-13482258)
chr4 (27-71)||(16192315-16192359)
chr4 (1-53)||(19854778-19854830)
chr4 (27-71)||(20545018-20545062)
chr4 (27-71)||(23722051-23722095)
chr4 (33-76)||(796997-797040)
chr4 (30-69)||(54096718-54096757)
chr4 (1-51)||(17201918-17201968)
chr4 (5-47)||(22474891-22474933)
chr4 (29-71)||(23269199-23269241)
chr4 (31-77)||(51268553-51268599)
chr4 (1-51)||(55814367-55814417)
chr4 (30-71)||(4949965-4950006)
chr4 (2-51)||(21037926-21037975)
chr4 (1-73)||(48373063-48373140)
chr4 (53-81)||(7384228-7384256)
chr4 (1-49)||(7478723-7478771)
chr4 (2-38)||(16191715-16191751)
chr4 (27-71)||(17730180-17730224)
chr4 (27-71)||(19313376-19313420)
chr4 (31-71)||(25010061-25010101)
chr4 (27-71)||(32448940-32448984)
chr4 (27-71)||(35667381-35667425)
chr4 (6-53)||(36721359-36721407)
chr4 (27-71)||(37147770-37147814)
chr4 (27-71)||(37424446-37424490)
chr4 (53-81)||(46096176-46096204)
chr4 (53-81)||(46138677-46138705)
chr4 (27-71)||(51019682-51019726)
chr4 (27-71)||(53102740-53102784)
[»] chr2 (69 HSPs)
chr2 (1-71)||(7939967-7940037)
chr2 (4-71)||(10357097-10357164)
chr2 (1-71)||(11796170-11796240)
chr2 (1-71)||(17829081-17829151)
chr2 (1-71)||(20894254-20894324)
chr2 (1-71)||(34173076-34173146)
chr2 (1-71)||(35899168-35899238)
chr2 (1-68)||(33146676-33146743)
chr2 (1-71)||(552481-552551)
chr2 (1-63)||(15006468-15006530)
chr2 (1-71)||(38972494-38972564)
chr2 (1-61)||(5474664-5474724)
chr2 (4-71)||(11051589-11051656)
chr2 (1-71)||(11563649-11563719)
chr2 (1-71)||(31597789-31597859)
chr2 (1-71)||(34248036-34248106)
chr2 (1-51)||(37198974-37199024)
chr2 (1-68)||(41078132-41078199)
chr2 (1-68)||(42791516-42791583)
chr2 (1-71)||(3044958-3045028)
chr2 (1-71)||(4437342-4437412)
chr2 (1-51)||(13873366-13873416)
chr2 (1-51)||(14013491-14013541)
chr2 (5-71)||(37009025-37009091)
chr2 (5-71)||(38910705-38910771)
chr2 (1-50)||(8726777-8726826)
chr2 (1-78)||(18467800-18467877)
chr2 (1-53)||(40768882-40768934)
chr2 (5-60)||(41521645-41521700)
chr2 (5-51)||(3514853-3514899)
chr2 (1-71)||(11563827-11563897)
chr2 (1-59)||(16599567-16599625)
chr2 (1-71)||(18997165-18997235)
chr2 (1-51)||(26196084-26196134)
chr2 (1-71)||(31363924-31363994)
chr2 (1-51)||(37330348-37330398)
chr2 (1-71)||(43656938-43657008)
chr2 (1-46)||(64368-64413)
chr2 (27-71)||(37199599-37199643)
chr2 (3-51)||(43439179-43439227)
chr2 (1-71)||(16111141-16111210)
chr2 (9-51)||(22606366-22606408)
chr2 (1-71)||(24387031-24387101)
chr2 (27-73)||(37009659-37009705)
chr2 (1-51)||(40020728-40020778)
chr2 (26-71)||(15890705-15890750)
chr2 (1-73)||(31709710-31709783)
chr2 (12-69)||(33886338-33886395)
chr2 (30-71)||(40947462-40947503)
chr2 (22-71)||(41521697-41521746)
chr2 (27-71)||(3515472-3515516)
chr2 (27-71)||(6229884-6229928)
chr2 (31-71)||(8313686-8313726)
chr2 (1-53)||(11942911-11942963)
chr2 (27-71)||(33146065-33146109)
chr2 (27-71)||(34173713-34173757)
chr2 (25-73)||(41521032-41521080)
chr2 (28-71)||(4437979-4438022)
chr2 (1-71)||(1534622-1534692)
chr2 (1-71)||(5113633-5113702)
chr2 (1-51)||(14743101-14743151)
chr2 (25-59)||(17449763-17449797)
chr2 (1-51)||(24758168-24758218)
chr2 (1-71)||(44332110-44332180)
chr2 (18-71)||(42791483-42791536)
chr2 (27-71)||(28167570-28167614)
chr2 (27-71)||(31597255-31597299)
chr2 (27-71)||(40769369-40769413)
chr2 (27-71)||(44332382-44332426)
[»] chr7 (77 HSPs)
chr7 (2-71)||(5228613-5228682)
chr7 (1-71)||(25287-25357)
chr7 (1-71)||(317309-317379)
chr7 (1-71)||(8535407-8535477)
chr7 (1-71)||(25607585-25607655)
chr7 (1-71)||(48982512-48982582)
chr7 (6-73)||(27144210-27144277)
chr7 (1-71)||(1573109-1573178)
chr7 (1-71)||(2146067-2146137)
chr7 (5-71)||(34999216-34999282)
chr7 (1-78)||(19332397-19332474)
chr7 (1-62)||(36847872-36847933)
chr7 (1-73)||(11640953-11641025)
chr7 (1-51)||(14078407-14078457)
chr7 (1-51)||(14388435-14388485)
chr7 (1-71)||(29823361-29823431)
chr7 (1-71)||(36687327-36687397)
chr7 (1-71)||(38670657-38670727)
chr7 (1-71)||(40400933-40401003)
chr7 (1-71)||(42813552-42813622)
chr7 (11-71)||(32867886-32867946)
chr7 (1-71)||(2935734-2935804)
chr7 (1-71)||(6184683-6184752)
chr7 (1-51)||(8122678-8122728)
chr7 (9-71)||(20261035-20261097)
chr7 (1-71)||(22712277-22712347)
chr7 (1-71)||(32388121-32388191)
chr7 (1-71)||(38790714-38790784)
chr7 (1-71)||(40343789-40343859)
chr7 (1-51)||(46010502-46010552)
chr7 (27-71)||(31221455-31221499)
chr7 (1-45)||(40402177-40402221)
chr7 (1-49)||(48872650-48872698)
chr7 (1-71)||(16425368-16425438)
chr7 (5-71)||(19156053-19156119)
chr7 (5-71)||(20755452-20755518)
chr7 (1-51)||(22263814-22263864)
chr7 (1-46)||(26903217-26903262)
chr7 (1-73)||(4518315-4518387)
chr7 (62-184)||(29736857-29736971)
chr7 (27-73)||(1573753-1573799)
chr7 (1-71)||(2790909-2790979)
chr7 (27-73)||(12677128-12677174)
chr7 (27-73)||(13068406-13068452)
chr7 (1-51)||(13904406-13904456)
chr7 (1-51)||(23742632-23742682)
chr7 (1-71)||(30870552-30870622)
chr7 (5-71)||(31220829-31220895)
chr7 (30-71)||(40401554-40401595)
chr7 (27-71)||(11639927-11639971)
chr7 (31-71)||(27619637-27619677)
chr7 (1-71)||(33869224-33869291)
chr7 (1-51)||(29736767-29736815)
chr7 (32-71)||(38790103-38790142)
chr7 (1-64)||(39186869-39186932)
chr7 (1-51)||(3340824-3340874)
chr7 (1-39)||(11696845-11696883)
chr7 (1-51)||(12677716-12677766)
chr7 (1-51)||(12679611-12679661)
chr7 (1-71)||(19435269-19435339)
chr7 (5-71)||(28308028-28308094)
chr7 (1-51)||(29103572-29103622)
chr7 (1-71)||(35783393-35783463)
chr7 (33-71)||(36688865-36688903)
chr7 (25-71)||(38987783-38987829)
chr7 (55-84)||(2935824-2935853)
chr7 (1-38)||(13067821-13067858)
chr7 (27-71)||(2790111-2790155)
chr7 (27-71)||(10412555-10412599)
chr7 (1-33)||(19155976-19156008)
chr7 (27-71)||(20261581-20261625)
chr7 (1-33)||(20755375-20755407)
chr7 (25-69)||(22711667-22711711)
chr7 (27-71)||(29615547-29615591)
chr7 (1-53)||(29616191-29616243)
chr7 (31-71)||(32867275-32867315)
chr7 (27-71)||(48872042-48872086)
[»] scaffold0105 (1 HSPs)
scaffold0105 (1-71)||(19620-19690)
[»] chr1 (76 HSPs)
chr1 (1-71)||(29510452-29510522)
chr1 (1-71)||(794721-794791)
chr1 (1-71)||(1845890-1845960)
chr1 (1-71)||(11916481-11916551)
chr1 (1-71)||(18407175-18407245)
chr1 (1-71)||(23739790-23739860)
chr1 (1-71)||(38011827-38011897)
chr1 (1-71)||(41321543-41321613)
chr1 (1-71)||(43319946-43320016)
chr1 (5-71)||(51362464-51362530)
chr1 (1-53)||(31765976-31766028)
chr1 (1-71)||(8061056-8061126)
chr1 (1-71)||(15356964-15357034)
chr1 (1-71)||(19072332-19072402)
chr1 (1-71)||(19120222-19120292)
chr1 (1-71)||(42830568-42830638)
chr1 (1-71)||(50144025-50144095)
chr1 (1-69)||(47553169-47553237)
chr1 (27-78)||(9091060-9091111)
chr1 (1-71)||(12048390-12048459)
chr1 (1-71)||(27226299-27226369)
chr1 (1-71)||(27931279-27931349)
chr1 (1-77)||(29344545-29344618)
chr1 (1-71)||(36605374-36605444)
chr1 (1-71)||(41575204-41575274)
chr1 (1-71)||(41575986-41576055)
chr1 (1-51)||(45195212-45195262)
chr1 (5-75)||(47216828-47216898)
chr1 (2-71)||(49129035-49129104)
chr1 (1-73)||(19997632-19997704)
chr1 (1-71)||(4666904-4666975)
chr1 (1-71)||(6851829-6851899)
chr1 (1-71)||(7306989-7307059)
chr1 (1-51)||(13574136-13574186)
chr1 (9-71)||(16537002-16537064)
chr1 (1-71)||(17109991-17110060)
chr1 (1-71)||(20585016-20585086)
chr1 (1-51)||(47233688-47233738)
chr1 (1-71)||(52505324-52505394)
chr1 (1-62)||(44645908-44645969)
chr1 (27-71)||(16536402-16536446)
chr1 (5-73)||(47291601-47291669)
chr1 (27-78)||(41575842-41575893)
chr1 (12-71)||(45559133-45559192)
chr1 (5-71)||(45738643-45738714)
chr1 (28-71)||(47233090-47233133)
chr1 (1-51)||(125045-125095)
chr1 (1-47)||(25068980-25069026)
chr1 (6-51)||(27532555-27532601)
chr1 (1-51)||(46682725-46682775)
chr1 (1-38)||(1386620-1386657)
chr1 (13-78)||(19611411-19611476)
chr1 (27-71)||(42831201-42831245)
chr1 (27-71)||(43320577-43320621)
chr1 (1-77)||(44649264-44649339)
chr1 (27-71)||(45737335-45737379)
chr1 (1-45)||(45737949-45737993)
chr1 (1-45)||(46111607-46111651)
chr1 (27-71)||(50143415-50143459)
chr1 (36-71)||(1116464-1116499)
chr1 (1-71)||(831907-831977)
chr1 (33-71)||(1114888-1114926)
chr1 (1-71)||(2275756-2275826)
chr1 (1-71)||(28045118-28045188)
chr1 (1-51)||(28971435-28971485)
chr1 (1-51)||(33126235-33126285)
chr1 (1-51)||(51611850-51611900)
chr1 (30-71)||(19071742-19071783)
chr1 (30-71)||(19119632-19119673)
chr1 (1-50)||(36511453-36511502)
chr1 (1-38)||(38294191-38294228)
chr1 (27-71)||(9997998-9998042)
chr1 (27-71)||(18406560-18406604)
chr1 (27-71)||(27225706-27225750)
chr1 (27-71)||(45738030-45738074)
chr1 (35-71)||(49129683-49129719)
[»] scaffold2113 (1 HSPs)
scaffold2113 (1-71)||(757-827)
[»] scaffold0289 (2 HSPs)
scaffold0289 (1-71)||(3439-3509)
scaffold0289 (33-71)||(4053-4091)
[»] scaffold0361 (3 HSPs)
scaffold0361 (4-71)||(16516-16583)
scaffold0361 (52-80)||(16476-16504)
scaffold0361 (27-71)||(17148-17192)
[»] scaffold1192 (2 HSPs)
scaffold1192 (1-71)||(191-261)
scaffold1192 (27-71)||(824-868)
[»] scaffold0368 (2 HSPs)
scaffold0368 (1-71)||(10624-10694)
scaffold0368 (27-71)||(11257-11301)
[»] scaffold0003 (3 HSPs)
scaffold0003 (1-71)||(421903-421973)
scaffold0003 (1-71)||(14080-14150)
scaffold0003 (27-71)||(421178-421222)
[»] scaffold0695 (2 HSPs)
scaffold0695 (1-73)||(2863-2935)
scaffold0695 (27-71)||(2254-2298)
[»] scaffold0340 (1 HSPs)
scaffold0340 (1-51)||(12833-12883)
[»] scaffold0201 (1 HSPs)
scaffold0201 (1-51)||(15968-16018)
[»] scaffold0166 (1 HSPs)
scaffold0166 (1-63)||(5888-5950)
[»] scaffold0115 (2 HSPs)
scaffold0115 (5-71)||(31331-31397)
scaffold0115 (1-38)||(32745-32782)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-71)||(26976-27046)
[»] scaffold0051 (2 HSPs)
scaffold0051 (1-51)||(11019-11069)
scaffold0051 (25-71)||(11627-11673)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-73)||(351910-351982)
[»] scaffold0451 (1 HSPs)
scaffold0451 (1-52)||(7993-8044)
[»] scaffold0098 (1 HSPs)
scaffold0098 (17-71)||(34304-34358)
[»] scaffold0712 (1 HSPs)
scaffold0712 (1-70)||(3683-3752)
[»] scaffold0709 (1 HSPs)
scaffold0709 (1-70)||(3703-3772)
[»] scaffold0068 (1 HSPs)
scaffold0068 (27-71)||(59291-59335)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-51)||(25857-25907)
[»] scaffold0189 (1 HSPs)
scaffold0189 (27-71)||(11320-11364)


Alignment Details
Target: chr6 (Bit Score: 67; Significance: 6e-30; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 31881941 - 31881871
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31881941 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaggggaggggagtgtaatt 31881871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 34280655 - 34280734
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatttactctatt 80  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| | ||||||||||||||||||||||||||    
T  34280655 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaatttactctatt 34280734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 188407 - 188477
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||    
T  188407 tttctaatatgttttgaataagaggagaggggagtgtatattttaacttaagaggggaggggagtgtaatt 188477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 21802039 - 21801969
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||    
T  21802039 tttctaatatgttttgaataagaggggaggggagtgtatattttaacataagaatggaggggagtgtaatt 21801969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 12026173 - 12026241
Alignment:
Q  3 tctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||    
T  12026173 tctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggaggggagtgtaatt 12026241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 5443111 - 5443041
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||| |||||||||    
T  5443111 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaagggagggaagtgtaatt 5443041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7127631 - 7127701
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||| ||||| |||||||||||||||||    
T  7127631 tttctaatatgttttgaataagaggggaggggagtgtacattttaacttaaaaggggaggggagtgtaatt 7127701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 14313823 - 14313893
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||| | |||||||||||||||||    
T  14313823 tttctaatatgttttgaataagaggggaggggattgtatattttaacataagaggggaggggagtgtaatt 14313893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 12033093 - 12033161
Alignment:
Q  3 tctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||| | |||||||||||||||||    
T  12033093 tctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaatt 12033161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 11522900 - 11522830
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||| ||| | |||||||||||||||||    
T  11522900 tttctaatatattttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaatt 11522830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14873118 - 14873048
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||| ||| | |||||||||||||||||    
T  14873118 tttctaatatgttttgaataagaggggaggggaatgtatattttaacttaagaggggaggggagtgtaatt 14873048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 25527830 - 25527760
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| | |||||| ||||||||||    
T  25527830 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggagagtgtaatt 25527760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 10702364 - 10702301
Alignment:
Q  8 tatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||| ||||||||||||||||||||||||| | ||||||| |||||||||    
T  10702364 tatgttttgaataagaggggaggggagtgtatattttaacataagaggggagggaagtgtaatt 10702301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 2091788 - 2091718
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||||||  |||  ||||||||||||||||||| | |||||||||||||||||    
T  2091788 tttctaatatgttttgaataagagggaaggtaagtgtatattttaacataagaggggaggggagtgtaatt 2091718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 9240959 - 9240889
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||| ||||||||||||| ||||| ||||||||||||||| ||| | |||||||||||||||||    
T  9240959 tttctaatatgctttgaataagaggggagggaagtgtatattttaacttaagaggggaggggagtgtaatt 9240889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12693946 - 12693896
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12693946 tttctaatatgttttgaataagaggggaggggagtgtatattttaacataa 12693896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 16326044 - 16326114
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||| |||| | |||||| ||||||||||    
T  16326044 tttctaatatggtttgaataagaggggaggggagtgtatattttaatataagaggggaggtgagtgtaatt 16326114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 16349442 - 16349512
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||| |||| | |||||| ||||||||||    
T  16349442 tttctaatatggtttgaataagaggggaggggagtgtatattttaatataagaggggaggtgagtgtaatt 16349512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 25577175 - 25577245
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||| ||| | |||| ||||||||||||    
T  25577175 tttctaatatgttttgaataagaggggaggtgagtgtatattttaacttaagaggggatgggagtgtaatt 25577245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 32003837 - 32003906
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||| | |||||||| ||||||||    
T  32003837 tttctaatatgttttgaataagaggggaggagagtgtatattttaacataagaggggagggg-gtgtaatt 32003906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 32113839 - 32113769
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||| || |||||||||||||| ||||||||||||||||||||||||| | ||||||| |||||||||    
T  32113839 tttctaacatattttgaataagaggggaggggagtgtatattttaacataagaggggagggaagtgtaatt 32113769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 33950326 - 33950260
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgt 67  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||| | |||||| ||||||    
T  33950326 tttctaatatgttttgaataagaggggaggggagtgtatattttaaaataagaggggaggagagtgt 33950260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 2523311 - 2523381
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||| ||||||| ||||| ||| ||||||||||||||| ||||||||  |||||||||    
T  2523311 tttctaatatgttttgagtaagaggggagggaagtatatattttaacataagaagggaggtcagtgtaatt 2523381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 34250162 - 34250093
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||| | |||||  ||||||||||    
T  34250162 tttctaatatgttttgaataagaggggagggg-gtgtatattttaacataataggggagatgagtgtaatt 34250093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 34794496 - 34794566
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||| |||| | ||||  ||||||||||||||||||| | |||||||||||||||||    
T  34794496 tttctaatatgttttgaaaaagatgggaggaaagtgtatattttaacataagaggggaggggagtgtaatt 34794566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 4100620 - 4100543
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggag-----tgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    ||||||| ||||||||||||||||| ||||||||     ||||||||||||||||| | |||||||||||||||||||    
T  4100620 tttctaacatgttttgaataagaggggaggggaggggagtgtatattttaacataagaggggaggggagtgtaattta 4100543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 11794744 - 11794811
Alignment:
Q  4 ctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||| ||||||||  ||||||||||| |||||||||||| | |||| ||||||||||||    
T  11794744 ctaatatgttttgtataagagggaaggggagtgtaaattttaacataagaggggatgggagtgtaatt 11794811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 6936475 - 6936405
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||| ||||| ||| || | |||||||||||||||||||| | |||||| ||||||||||    
T  6936475 tttctaatatgttttaaataataggggatgagagtgtatattttaacataagaggggaggagagtgtaatt 6936405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 17312072 - 17312142
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||   |||| ||||||||||||||| |  ||||||||||||||||    
T  17312072 tttctaatatgttttgaataagaggggataagagtttatattttaacataagagtggaggggagtgtaatt 17312142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 4125982 - 4125905
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggag-----tgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    ||||||| ||||||||||||||||| ||||||||     ||||||||||||||||| | |||||| ||||||||||||    
T  4125982 tttctaacatgttttgaataagaggggaggggaggggagtgtatattttaacataagaggggaggagagtgtaattta 4125905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 3767720 - 3767790
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||| ||||| |||||||||||||| ||| ||||||||||||||||| ||| | |||||  ||||||||||    
T  3767720 tttcaaatatattttgaataagaggggagaggagtgtatattttaacttaagaggggagatgagtgtaatt 3767790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7448869 - 7448934
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||     |||||||||||||||||||||| | ||||  |||||||||||    
T  7448869 tttctaatatgttttgaataagag-----gggagtgtatattttaacataagaggggaaaggagtgtaatt 7448934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 24620008 - 24619958
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||| ||||||||| ||||| ||||| |||||||||||||||||||    
T  24620008 tttctaatacgttttgaatcagaggggagggaagtgtatattttaacataa 24619958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 32522477 - 32522527
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    |||||||||| ||||||||||||||  |||| |||||||||||||||||||    
T  32522477 tttctaatatattttgaataagagggaagggaagtgtatattttaacataa 32522527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 34709328 - 34709291
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgta 38  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  34709328 tttctaatatgttttgaataagaggggaggggagtgta 34709291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 12767029 - 12766977
Alignment:
Q  19 taagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||| |||| |||||||||||||||||||  | |||||||||||||||||    
T  12767029 taagaggggaggagagtgtatattttaacataggaggggaggggagtgtaatt 12766977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 12767606 - 12767650
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||| ||||||||||||||||||| | |||||||||||||||||    
T  12767606 gagggaagtgtatattttaacataagaggggaggggagtgtaatt 12767650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 21802604 - 21802648
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | |||||| ||||||||||    
T  21802604 gaggggagtgtatattttaacataagaggggaggagagtgtaatt 21802648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 32131021 - 32130967
Alignment:
Q  16 gaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||  |||| ||||||||||||||||| || ||||||||||||||||||    
T  32131021 gaataagagggaagggaagtgtatattttaacat-aagagggaggggagtgtaatt 32130967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 33266717 - 33266779
Alignment:
Q  14 ttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatttactct 77  Q
    ||||| |||||||||| | |||||||||||||| |||||| ||||  |||||||||||||||||    
T  33266717 ttgaaaaagaggagagagaagtgtatattttaaaataaaagggga-aggagtgtaatttactct 33266779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 22022072 - 22022002
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||| |||||  ||||  ||||||||||| ||||||| | ||||||| || ||||||    
T  22022072 tttctaatatgttttgaaaaagagaggaggaaagtgtatatttaaacataagaggggagggaagggtaatt 22022002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30462090 - 30462140
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||| ||||||||||||| || | ||||||||||||||| ||||    
T  30462090 tttctaatatgctttgaataagaggggatgagagtgtatattttaatataa 30462140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 33276387 - 33276452
Alignment:
Q  6 aatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||| |||||  ||||| ||||||| ||||||||||||| | |||  ||||||||||    
T  33276387 aatatgttttgaaaaagagatgagggaagtgtatgttttaacataaaaggagagatgagtgtaatt 33276452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 2522743 - 2522699
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||| |||| | |||||| ||||||||||    
T  2522743 gaggggagtgtatattttaatataagaggggaggagagtgtaatt 2522699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 14313266 - 14313222
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||| ||||||||||||||||||||| ||||| ||| |||||||    
T  14313266 gagggaagtgtatattttaacataaaaggggagaggaatgtaatt 14313222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 16852321 - 16852251
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    ||||||||||||||||  ||||||| | || ||||||||| |||||||| || |||||| |||||||||||||    
T  16852321 tttctaatatgttttgcttaagaggtggggagagtgtata-tttaacat-aagagggagtggagtgtaattta 16852251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 22022274 - 22022318
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | |||| | ||||||||||    
T  22022274 gaggggagtgtatattttaacataagaggggatgagagtgtaatt 22022318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 31281714 - 31281662
Alignment:
Q  1 tttctaatatgttttgaataaga-ggagaggggagtgtatattttaacataaa 52  Q
    ||||||||||||||||||||||| ||||||   | ||||||||||||||||||    
T  31281714 tttctaatatgttttgaataagagggagagaaaaatgtatattttaacataaa 31281662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 1e-27; HSPs: 70)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 13422040 - 13422118
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatttactctat 79  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  13422040 tttctaatatgttttgaataagagaggaggggagtgtatattttaacataagaggggaggggagtgtaatttactctat 13422118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 32905301 - 32905371
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||    
T  32905301 tttctaatatgttttgaataagaggggagggaagtgtatattttaacataaaaagggaggagagtgtaatt 32905371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14363878 - 14363808
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| | |||||||||||||||||    
T  14363878 tttctaatatgttttgaataagaggtgaggggagtgtatattttaacttaagaggggaggggagtgtaatt 14363808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 22934392 - 22934322
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| | |||||||||||||||||    
T  22934392 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaatt 22934322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 40791729 - 40791799
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||| |||||||||||    
T  40791729 tttctaatatgttttgaataagaggtgaggggagtgtatattttaacataagaggggagaggagtgtaatt 40791799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 8297776 - 8297851
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatttactc 76  Q
    ||||||||||||||||||||||||| || || ||||||||||||||| ||| | ||||||||||||||||||||||    
T  8297776 tttctaatatgttttgaataagaggggatggaagtgtatattttaacttaagaggggaggggagtgtaatttactc 8297851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 44283796 - 44283717
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatttactctatt 80  Q
    |||||||||||||||||| |||||| ||| | ||||||||||||||||||| | ||| ||||||||||||||||||||||    
T  44283796 tttctaatatgttttgaaaaagaggggagtgaagtgtatattttaacataagaggggtggggagtgtaatttactctatt 44283717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 10216109 - 10216179
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||  || | |||||||||||||||||    
T  10216109 tttctaatatgttttgaataagaggggaggggagtgtatattttaactgaagaggggaggggagtgtaatt 10216179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 13440110 - 13440188
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatttactctat 79  Q
    |||||||||| |||||||||||||| || | |||||||||||||||||||| | ||| |||||||||||||||||||||    
T  13440110 tttctaatatattttgaataagaggggatgagagtgtatattttaacataagaggggtggggagtgtaatttactctat 13440188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 17565312 - 17565382
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||| | ||||| |||||||||||    
T  17565312 tttctaatatgttttgaataagaggggagaggagtgtatattttaacataagaggggagaggagtgtaatt 17565382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 25485400 - 25485470
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||||||  |||||||||||||||||||| ||| | |||||||||||||||||    
T  25485400 tttctaatatgttttgaataagagggtaggggagtgtatattttaacttaagaggggaggggagtgtaatt 25485470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 29636360 - 29636430
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||| ||| | |||||||||||||||||    
T  29636360 tttctaatatgttttgaataagaggggagtggagtgtatattttaacttaagaggggaggggagtgtaatt 29636430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 31846550 - 31846480
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||| | ||||||| |||||||||    
T  31846550 tttctaatatgttttgaataagagggaaggggagtgtatattttaacataagaggggagggaagtgtaatt 31846480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 44746813 - 44746863
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44746813 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 44746863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 4855361 - 4855291
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||||||||| ||| ||||||||| |||||    
T  4855361 tttctaatatgttttgaataagagaggaggggattgtatattttaacataagaagagaggggagtataatt 4855291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 11759491 - 11759421
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||  |||||||||||||||||||   |||||||||||||||||    
T  11759491 tttctaatatgttttgaataagaggggaggaaagtgtatattttaacataagtggggaggggagtgtaatt 11759421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 14880162 - 14880232
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||| |||| ||||||||| ||||| ||||||||||||||||||| | |||||||||||||||||    
T  14880162 tttctaatatttttttaataagaggggagggaagtgtatattttaacataagaggggaggggagtgtaatt 14880232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 29459232 - 29459302
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||  |||||||||| |||||||||||||| | | |||||||||||||||    
T  29459232 tttctaatatgttttgaataagagatgaggggagtggatattttaacataagaggagaggggagtgtaatt 29459302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 32904193 - 32904263
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||| |||||||||||||  ||||| ||||||||||||||||||| | |||||||||||||||||    
T  32904193 tttctaatatattttgaataagagtggagggaagtgtatattttaacataagaggggaggggagtgtaatt 32904263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 39998473 - 39998403
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||| ||| | |||||| ||||||||||    
T  39998473 tttctaatatgttttgaataagaggggaggggagtgtgtattttaacttaagaggggaggagagtgtaatt 39998403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 40299022 - 40298952
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||  ||||||||||||||||||| || | ||||||||||||||    
T  40299022 tttctaatatgttttgaataagaggggaggaaagtgtatattttaacataagaatgaaggggagtgtaatt 40298952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 41262738 - 41262788
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41262738 tttctaatatgttttgaataagaggagaggggagtatatattttaacataa 41262788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 3075404 - 3075339
Alignment:
Q  6 aatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||| ||||||||||||||| || |||||||||||||||||||||| | |||||||||||||||||    
T  3075404 aataagttttgaataagaggggaagggagtgtatattttaacataagaggggaggggagtgtaatt 3075339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 11140192 - 11140127
Alignment:
Q  6 aatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||||| | |||||||||||||||||    
T  11140192 aatatattttgaatatgaggggaggggagtgtatattttaacataagaggggaggggagtgtaatt 11140127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 6292615 - 6292547
Alignment:
Q  3 tctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||| ||| | ||||||||| |||||||    
T  6292615 tctaatatgttttgaataagaggggaggggattgtatattttaacttaagaggggaggggaatgtaatt 6292547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 34364557 - 34364617
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggg 61  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||| | |||||||    
T  34364557 tttctaatatgttttgaataagaggggaggagagtgtatattttaacataagaggggaggg 34364617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 8437997 - 8437930
Alignment:
Q  4 ctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |  |||| |||||||||||    
T  8437997 ctaatatgttttgaataaaaggggaggggagtgtatattttaacataagagaggagtggagtgtaatt 8437930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 6099441 - 6099371
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||| |||||||||||||||| ||||  ||||||||||||||||||||| | ||||| |||||||||    
T  6099441 tttctaatttgttttgaataagaggggaggaaagtgtatattttaacataaaaggagagggaagtgtaatt 6099371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 8442759 - 8442689
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||||||| | |||| | ||||||||||    
T  8442759 tttctaatatgttttgaataagagggtaggggtgtgtatattttaacataagaggggaagagagtgtaatt 8442689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 26928291 - 26928221
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||  ||||||||||||||||||||  |||| || |||||||||    
T  26928291 tttctaatatgttttgaataagaggggaggaaagtgtatattttaacataaatggggaaggaagtgtaatt 26928221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 34923944 - 34923894
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  34923944 tttctaatatgttttaaataagaggggaggggagtgtatattttaacataa 34923894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 41311769 - 41311703
Alignment:
Q  5 taatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||||||| |||||  ||||||||||    
T  41311769 taatatattttgaataagaggggaggggaatgtatattttaacataaaaggggagtagagtgtaatt 41311703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 43764181 - 43764111
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||||||||| | ||||| | |||||||||    
T  43764181 tttctaatatgttttgaataaaaggggaggagagtgtatattttaacataagaggggagagaagtgtaatt 43764111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 3075230 - 3075165
Alignment:
Q  6 aatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||| |||||||||||||||| |||||| ||||||||||||||||| | ||||||| |||||||||    
T  3075230 aataagttttgaataagaggataggggaatgtatattttaacataagaggggagggtagtgtaatt 3075165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 14093584 - 14093512
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||| ||| |   ||| |||||||||||||    
T  14093584 tttctaatatattttgaataagaggggaggggagtgtatattttaacttaagagatgagaggagtgtaattta 14093512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 24810230 - 24810281
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaa 52  Q
    ||||||||||||||||||||||||| |||||||  |||||||||||||||||    
T  24810230 tttctaatatgttttgaataagaggggaggggaacgtatattttaacataaa 24810281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 13573285 - 13573235
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||| ||||||| ||||||| |||||||||||||||||    
T  13573285 tttctaatatgttttgagtaagaggggaggggattgtatattttaacataa 13573235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 24778087 - 24778021
Alignment:
Q  5 taatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||  || | ||||||||||||||||||| | |||||| ||||||||||    
T  24778087 taatatgttttgaataagagggtagagaagtgtatattttaacataagaggggaggagagtgtaatt 24778021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 33972402 - 33972352
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||| ||||||| | |||||||||||||||||    
T  33972402 tttctaatatgttttgaataagatgagagggtaatgtatattttaacataa 33972352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 34679899 - 34679968
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||  ||||||||||||||||||  | |||||| ||||||||||    
T  34679899 tttctaatatgttttgaataagagg-gaggaaagtgtatattttaacatacgaggggaggagagtgtaatt 34679968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 37265596 - 37265546
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  37265596 tttctaatatgttttgaataagaggagaggaaagtgtatgttttaacataa 37265546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 8628026 - 8628075
Alignment:
Q  2 ttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    |||||| ||||||||||||||||| |||| ||||||||||||||||||||    
T  8628026 ttctaaaatgttttgaataagaggggaggagagtgtatattttaacataa 8628075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 12330969 - 12330897
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    |||||||||| |||||||||||||  |||||||||||||| |||||||||| |||| | | || |||||||||    
T  12330969 tttctaatatattttgaataagagaggaggggagtgtatactttaacataagaaggaatgagaatgtaattta 12330897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 24809654 - 24809610
Alignment:
Q  33 agtgtatattttaacataaaaagggaggggagtgtaatttactct 77  Q
    ||||||||||||||||||| | |||||||||||||||||||||||    
T  24809654 agtgtatattttaacataagaggggaggggagtgtaatttactct 24809610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 25598437 - 25598501
Alignment:
Q  7 atatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||| |||||||||||||| ||| | ||||||||||||||| ||| | |||||||||||||||||    
T  25598437 atatattttgaataagaggggagagtagtgtatattttaacttaagaggggaggggagtgtaatt 25598501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 36016193 - 36016133
Alignment:
Q  1 tttctaatatgtttt-gaataagaggagaggggagtgtatattttaacataaaaagggagg 60  Q
    ||||||||||||||| |||||||||   |||||||||||||||||||||||| ||||||||    
T  36016193 tttctaatatgttttagaataagagagaaggggagtgtatattttaacataagaagggagg 36016133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 17496900 - 17496969
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||| |||||||||||||||||| || | || ||||||||||||||||| | |||| ||||||||||||    
T  17496900 tttctattatgttttgaataagaggggaagagattgtatattttaacataagagggga-gggagtgtaatt 17496969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 37837551 - 37837621
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||| |||  ||||| |||||||||||||| |||| | |||||| || |||||||    
T  37837551 tttctaatatgttttgaataggagaggagggaagtgtatattttaagataagaggggaggagaatgtaatt 37837621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 10215523 - 10215479
Alignment:
Q  33 agtgtatattttaacataaaaagggaggggagtgtaatttactct 77  Q
    ||||||||||||||| ||| | |||||||||||||||||||||||    
T  10215523 agtgtatattttaacttaagaggggaggggagtgtaatttactct 10215479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 14094150 - 14094194
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||| |||||||||||| | |||||||||||||||||    
T  14094150 gaggggagtgtaaattttaacataagaggggaggggagtgtaatt 14094194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 17564745 - 17564701
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | ||||||| |||||||||    
T  17564745 gaggggagtgtatattttaacataagaggggagggaagtgtaatt 17564701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 41312380 - 41312424
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||| ||||||||||||||||| | |||||||||||||||||    
T  41312380 gaggggaatgtatattttaacataagaggggaggggagtgtaatt 41312424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 21304055 - 21304016
Alignment:
Q  12 ttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    |||||||||||||| ||||| |||||||||||||||||||    
T  21304055 ttttgaataagaggggagggaagtgtatattttaacataa 21304016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 31739597 - 31739562
Alignment:
Q  16 gaataagaggagaggggagtgtatattttaacataa 51  Q
    |||||||||| |||||||||||||||||||||||||    
T  31739597 gaataagaggggaggggagtgtatattttaacataa 31739562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 32 - 71
Target Start/End: Complemental strand, 32903685 - 32903646
Alignment:
Q  32 gagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||| ||||||| |||||||||||    
T  32903685 gagtgtatattttaacataagaagggagtggagtgtaatt 32903646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 37304873 - 37304936
Alignment:
Q  8 tatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||| || ||| ||||| |||||||||||||||||  | ||| ||||||||||    
T  37304873 tatgttttgaataagtggggagaggagtctatattttaacataaaagagaaggagagtgtaatt 37304936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 3075964 - 3076010
Alignment:
Q  25 gagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||| |||| | | |||||||||||||||    
T  3075964 gagaggggagtgtatattttaatataagaggagaggggagtgtaatt 3076010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 3813943 - 3813989
Alignment:
Q  3 tctaatatgttttgaataagaggagaggggagtgtatattttaacat 49  Q
    |||||||| |||||||||||||| |||  ||||||||||||||||||    
T  3813943 tctaatatattttgaataagaggggagtagagtgtatattttaacat 3813989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 30353939 - 30353897
Alignment:
Q  9 atgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||| ||||||||| ||||| |||||||||||||||||||    
T  30353939 atgttttaaataagaggggagggaagtgtatattttaacataa 30353897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 42166631 - 42166673
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattt 43  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||    
T  42166631 tttctaatatgttttgaataataggggaggagagtgtatattt 42166673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 44284356 - 44284394
Alignment:
Q  33 agtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  44284356 agtgtatattttaacataagaggggaggggagtgtaatt 44284394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 5872740 - 5872781
Alignment:
Q  30 gggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||||| ||  ||||||||||    
T  5872740 gggagtgtatattttaacataaaaaggaagtagagtgtaatt 5872781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 10674384 - 10674335
Alignment:
Q  2 ttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    |||||||||||||||||||||||| |||  || |||||||||||| ||||    
T  10674384 ttctaatatgttttgaataagaggggagaagattgtatattttaatataa 10674335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 42861618 - 42861577
Alignment:
Q  33 agtgtatattttaacataaaaagggaggggagtgtaatttac 74  Q
    |||||| |||||||||||| | ||||||||||||||||||||    
T  42861618 agtgtagattttaacataagaggggaggggagtgtaatttac 42861577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 44147609 - 44147654
Alignment:
Q  5 taatatgttttgaataagaggagaggggagtgtatattttaacata 50  Q
    |||| ||||||||| ||||||||||| ||||||||||||| |||||    
T  44147609 taatgtgttttgaagaagaggagaggagagtgtatattttgacata 44147654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 3940225 - 3940265
Alignment:
Q  35 tgtatattttaacataaaaagggaggggagtgtaatttact 75  Q
    |||||||||||| |||| | |||||||||||||||||||||    
T  3940225 tgtatattttaatataagaggggaggggagtgtaatttact 3940265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 11141061 - 11141105
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| |  |||||||| |||||||    
T  11141061 gaggggagtgtatattttaacataagagaggaggggaatgtaatt 11141105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 22935980 - 22936020
Alignment:
Q  33 agtgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    ||||||||||||||| ||| | |||||||||||||||||||    
T  22935980 agtgtatattttaacttaagaggggaggggagtgtaattta 22936020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 37266146 - 37266186
Alignment:
Q  31 ggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||| | |||||| ||||||||||    
T  37266146 ggagtgtatattttaacataagaggggaggagagtgtaatt 37266186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 40133560 - 40133488
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    |||||||||| ||||| || ||||| ||| |||||||||||||| |||||| | ||||| | | |||||||||    
T  40133560 tttctaatattttttgcatgagaggggagtggagtgtatattttgacataagaggggagagtaatgtaattta 40133488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 5e-27; HSPs: 90)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22129790 - 22129713
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatttactcta 78  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| | ||||||||||||||||||||||||    
T  22129790 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaatttactcta 22129713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 18365254 - 18365324
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||    
T  18365254 tttctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggaggggagtgtaatt 18365324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 11055894 - 11055819
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatttactc 76  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||| ||| | ||||||||||||||||||||||    
T  11055894 tttctaatatgtattgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaatttactc 11055819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 3089853 - 3089783
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||| |||||||||    
T  3089853 tttctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggagggaagtgtaatt 3089783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 4558135 - 4558065
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| | |||||||||||||||||    
T  4558135 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaatt 4558065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 10887813 - 10887743
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| | |||||||||||||||||    
T  10887813 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaatt 10887743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 13625878 - 13625948
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||| | |||||||||||||||||    
T  13625878 tttctaatatgttttgaataagaggggaggggagggtatattttaacataagatgggaggggagtgtaatt 13625948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 37183181 - 37183111
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| | |||||||||||||||||    
T  37183181 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaatt 37183111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 40974139 - 40974069
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||| | |||||||||||||||||    
T  40974139 tttctaatatgttttgaataagaggggaggggattgtatattttaacataagaggggaggggagtgtaatt 40974069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 1263032 - 1263102
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||  ||||||||||||||||||| | |||||||||||||||||    
T  1263032 tttctaatatgttttgaataagaggggaggaaagtgtatattttaacataagaggggaggggagtgtaatt 1263102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 1763742 - 1763676
Alignment:
Q  5 taatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||  |||||||||    
T  1763742 taatatgttttgaataagaggggaggagagtgtatattttaacataaaaagggaggaaagtgtaatt 1763676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 2756580 - 2756650
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||||||| | |||||||||||||||||    
T  2756580 tttctaatatgttttgaataagatggaaggggagtgtatattttaacataagaggggaggggagtgtaatt 2756650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 5963160 - 5963090
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||| |||||| ||||    
T  5963160 tttctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggagaggagtgcaatt 5963090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 14602083 - 14602153
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| | ||||||| |||||||||    
T  14602083 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggagggaagtgtaatt 14602153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 32737144 - 32737214
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||  |||||||||    
T  32737144 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaaaaggggaggaaagtgtaatt 32737214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 49080582 - 49080652
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||| | ||||||||| |||||||    
T  49080582 tttctaatatgttttgaacaagaggggaggggagtgtatattttaacataagaggggaggggaatgtaatt 49080652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 27393030 - 27392964
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgta 68  Q
    |||||||| |||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||    
T  27393030 tttctaat-tgttttgaataagaggggaggggagtgtatatttaaacataagaagggaggggagtgta 27392964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 4757098 - 4757028
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| || |||||||||||||||||| ||| | |||||| ||||||||||    
T  4757098 tttctaatatgttttgaataagaggggatgggagtgtatattttaacttaagaggggaggagagtgtaatt 4757028  T

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Target: chr3; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 11344794 - 11344724
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| |||| | |||||||||||| ||||| | |||||||||||||||||    
T  11344794 tttctaatatgttttgaataagaggggaggagggtgtatattttagcataagaggggaggggagtgtaatt 11344724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 11581939 - 11581889
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11581939 tttctaatatgttttgaataagaggggaggggagtgtatattttaacataa 11581889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 23309593 - 23309663
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||  ||| |  ||||||||||||||||    
T  23309593 tttctaatatgttttgaataagaggggaggggagtgtatattttaagttaagagaggaggggagtgtaatt 23309663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 27255947 - 27256017
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||| ||| ||||| |||||||||||||| |||| | |||||||||||||||||    
T  27255947 tttctaatatgttttgaataataggggagggaagtgtatattttaatataagaggggaggggagtgtaatt 27256017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 40927596 - 40927526
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||  |||||||||||||| ||||||||||||||||||||||||| | ||||||| |||||||||    
T  40927596 tttctaataaattttgaataagaggggaggggagtgtatattttaacataagaggggagggaagtgtaatt 40927526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 41865658 - 41865727
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||| | ||| |||||||||||||||||    
T  41865658 tttctaatatgttttgaataagaggggagggaagtgtatattttaac-ttaaaggggaggggagtgtaatt 41865727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 48224110 - 48224180
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||| |||||||| |||||| ||||| ||||||||||||||||||| | |||||||||||||||||    
T  48224110 tttctaataggttttgaaaaagaggggagggaagtgtatattttaacataagatgggaggggagtgtaatt 48224180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 49764593 - 49764523
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||| | ||||||||||||||||||| | ||||||| |||||||||    
T  49764593 tttctaatatgttttgaataagaggggagagaagtgtatattttaacataagaggggagggaagtgtaatt 49764523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 27395049 - 27395118
Alignment:
Q  2 ttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||| || ||| ||||||||||||||||||||| | ||||||||| |||||||    
T  27395049 ttctaatatgttttgaataagtggggagtggagtgtatattttaacataagaggggaggggaatgtaatt 27395118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 54606402 - 54606467
Alignment:
Q  6 aatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||| | | |||||||||||||||    
T  54606402 aataagttttgaataagaggggaggggagtgtatattttaacataagaggagaggggagtgtaatt 54606467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 20612052 - 20612119
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgta 68  Q
    ||||||||||||||||||||||||| ||||||| | ||||||||||||||| | ||||||||| ||||    
T  20612052 tttctaatatgttttgaataagaggggaggggattatatattttaacataagaggggaggggattgta 20612119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 22524221 - 22524151
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||||| ||| | ||||| |||||||||||    
T  22524221 tttctaatatgttttgaataagaggggagggaagtgtatcttttaacttaagaggggagaggagtgtaatt 22524151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 40035840 - 40035790
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  40035840 tttctaatatgttttgaataagaggggaggggagtatatattttaacataa 40035790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 48841618 - 48841548
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| |||| ||||||||| |||||||||| | | ||| |||||||||||    
T  48841618 tttctaatatgttttgaataagaggggaggagagtgtataatttaacataagaggagagaggagtgtaatt 48841548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 17764961 - 17765021
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatttactctattaaattaca 88  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||||| |||||||||||    
T  17764961 gaggggagtgtatattttaacataagaggggaggggagtttaatttactc-attaaattaca 17765021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 19066281 - 19066341
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatttactctattaaattaca 88  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||||| |||||||||||    
T  19066281 gaggggagtgtatattttaacataagaggggaggggagtttaatttactc-attaaattaca 19066341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 19538339 - 19538415
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatttactct 77  Q
    ||||||||||||||||||||||||  ||||| ||||||||||||||||||| | || ||   |||||||||||||||    
T  19538339 tttctaatatgttttgaataagagtggagggaagtgtatattttaacataagatggaagaatagtgtaatttactct 19538415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 45307331 - 45307402
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    ||||||||||| ||||||||||||| ||||| ||||||||||||||||| || ||||||| ||||||| ||||    
T  45307331 tttctaatatgctttgaataagaggggagggaagtgtatattttaacat-aagagggaggagagtgtagttta 45307402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 54404204 - 54404252
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacat 49  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  54404204 tttctaatatgttttgaataagaggggaggggaatgtatattttaacat 54404252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 44950959 - 44951026
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgta 68  Q
    |||||||||| |||||||||||||| ||||  ||||||||||||||||||| | |||||| |||||||    
T  44950959 tttctaatatattttgaataagaggggaggaaagtgtatattttaacataagaggggaggtgagtgta 44951026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 1363485 - 1363415
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||| ||||||||||||| |||| || ||||||||||||||||| | ||||| ||||| |||||    
T  1363485 tttctaatatgctttgaataagaggggaggagaatgtatattttaacataataggggagtggagtttaatt 1363415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7725379 - 7725449
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||| |||||| ||| | ||||||||||||||||||| | | | |||||||||||||    
T  7725379 tttctaatatgttttgaaaaagaggggagtgaagtgtatattttaacataagaggagtggggagtgtaatt 7725449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 14601006 - 14601068
Alignment:
Q  9 atgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||| ||||| ||||||||||||||||||| || ||| || |||||||||    
T  14601006 atgttttgaataagaggggagggaagtgtatattttaacataagaaaggaaggaagtgtaatt 14601068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 18480199 - 18480125
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatttact 75  Q
    ||||||||| ||||||||||||||| ||||||| ||| ||||||||||||| | |||||  |||| |||||||||    
T  18480199 tttctaataagttttgaataagaggggaggggaatgtttattttaacataagaggggagaagagtttaatttact 18480125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 25259911 - 25259981
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||||||  || ||  | |||||||||||||||||  ||||||||||||||||    
T  25259911 tttctaatatgttttgaataagagggaagagggatatatattttaacataaaagaggaggggagtgtaatt 25259981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 27397490 - 27397540
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    |||| |||||||||||||||||||| ||||||| |||||||||||||||||    
T  27397490 tttcaaatatgttttgaataagaggggaggggaatgtatattttaacataa 27397540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 27638578 - 27638508
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||| ||||||||  ||||||| | |||||||||||||||||  |||||| |||||||||    
T  27638578 tttctaatatgttttcaataagagaggaggggaatatatattttaacataaaagaggagggaagtgtaatt 27638508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 32221706 - 32221636
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||| |||||||||||||| || |||||||||||||||||||  ||| || ||||||||| ||||    
T  32221706 tttctaatatattttgaataagaggggatgggagtgtatattttaacaagaaagggaaggggagtgcaatt 32221636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 32373399 - 32373349
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||||||||  | |||||||||||||||||    
T  32373399 tttctaatatgttttgaataagaggagaggaaaatgtatattttaacataa 32373349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 47794086 - 47794016
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| || |  |||||||||||||| |||| | | |||||||||||||||    
T  47794086 tttctaatatgttttgaataagaggggaagaaagtgtatattttaagataagaggtgaggggagtgtaatt 47794016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 6293308 - 6293239
Alignment:
Q  2 ttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||| |||||||||||||  ||| ||||||||||||||||||||| | ||||||| | |||||||    
T  6293308 ttctaatatattttgaataagagaggagcggagtgtatattttaacataagaggggagggaaatgtaatt 6293239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 10689435 - 10689484
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacata 50  Q
    ||||||||||||||||||||||||| |||| || ||||||||||||||||    
T  10689435 tttctaatatgttttgaataagaggggaggagaatgtatattttaacata 10689484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 24542954 - 24543023
Alignment:
Q  1 tttctaatatgttttgaataaga-ggagaggggagtgtatattttaacataaaaagggaggggagtgtaa 69  Q
    ||||||||||||||||||||||| || |||||||||||| |||||||| ||| |  ||||||||||||||    
T  24542954 tttctaatatgttttgaataagagggggaggggagtgtacattttaacttaagagaggaggggagtgtaa 24543023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 11345358 - 11345402
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | |||||||||||||||||    
T  11345358 gaggggagtgtatattttaacataagaggggaggggagtgtaatt 11345402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 18364707 - 18364663
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | |||||||||||||||||    
T  18364707 gaggggagtgtatattttaacataagaggggaggggagtgtaatt 18364663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 54605839 - 54605795
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | |||||||||||||||||    
T  54605839 gaggggagtgtatattttaacataagaggggaggggagtgtaatt 54605795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 291767 - 291826
Alignment:
Q  12 ttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||| ||||||||||||||||| ||||||| | |||||| | ||||||||    
T  291767 ttttgaataagaggggaggggagtgtatatttgaacataagaggggaggagggtgtaatt 291826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 41586748 - 41586700
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||||||    
T  41586748 tttctaatatgttttgaataagagggga--ggagtgtatattttaacataa 41586700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 1262476 - 1262430
Alignment:
Q  25 gagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||    
T  1262476 gagaggagagtgtatattttaacataagaggggaggggagtgtaatt 1262430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 16067868 - 16067918
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||| | || | ||||||||||||||||||||    
T  16067868 tttctaatatgttttgaataagaagggatgtgagtgtatattttaacataa 16067918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 19345347 - 19345278
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||| |||||||| ||||| |||||||| |||||||||| | | ||| |||||||||||    
T  19345347 tttctaatatgttttgcataagaggcgagggaagtgtata-tttaacataagaggagagtggagtgtaatt 19345278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 27517237 - 27517191
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaac 47  Q
    ||||||||||||||||||||||||| ||||| |||||||| ||||||    
T  27517237 tttctaatatgttttgaataagaggggagggaagtgtataatttaac 27517191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 32255702 - 32255768
Alignment:
Q  5 taatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||  ||||| ||| ||||||||||||||| | | ||||| |||||||||    
T  32255702 taatatgttttgaataagagtggagggaagtatatattttaacataagaggagagggaagtgtaatt 32255768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 44500040 - 44500086
Alignment:
Q  25 gagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||    
T  44500040 gagagggaagtgtatattttaacataagaggggaggggagtgtaatt 44500086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 45241816 - 45241870
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaag 55  Q
    |||||||||||||||||||||||||  ||| || | |||||||||||||||||||    
T  45241816 tttctaatatgttttgaataagagggaaggagattatatattttaacataaaaag 45241870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 54876904 - 54876970
Alignment:
Q  5 taatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||  ||| |||||||| ||||||| |||||||||||  | |||||||||||||||||    
T  54876904 taatatgttttgcctaaaaggagaggagagtgtaaattttaacataggaggggaggggagtgtaatt 54876970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 3090417 - 3090461
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | |||||||||||| ||||    
T  3090417 gaggggagtgtatattttaacataagaggggaggggagtgcaatt 3090461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 30128239 - 30128283
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatatttta 45  Q
    |||||||||||||||||||||||||  |||| |||||||||||||    
T  30128239 tttctaatatgttttgaataagagggaagggaagtgtatatttta 30128283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 30604774 - 30604706
Alignment:
Q  5 taatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    |||||||||||||| |||| | || |||||||||||||||||||||| |  | |||||| |||||||||    
T  30604774 taatatgttttgaagaagaagggatgggagtgtatattttaacataagagagaaggggaatgtaattta 30604706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 40036395 - 40036439
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | ||||||||| |||||||    
T  40036395 gaggggagtgtatattttaacataagaggggaggggaatgtaatt 40036439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 41587310 - 41587354
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | ||||| |||||||||||    
T  41587310 gaggggagtgtatattttaacataagaggggagaggagtgtaatt 41587354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 49765128 - 49765172
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||| ||||||||||||||||| | |||||||||||||||||    
T  49765128 gaggggaatgtatattttaacataagaggggaggggagtgtaatt 49765172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 54403636 - 54403592
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||| ||||||||||||||||||| | |||||||||||||||||    
T  54403636 gagggaagtgtatattttaacataagaggggaggggagtgtaatt 54403592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 10592838 - 10592767
Alignment:
Q  1 tttctaatatgttttgaataaga-ggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||  || || |||| |||||||||||||||||||| | | |||||| ||||||||    
T  10592838 tttctaatatgttttgaatttgaaggggaggtgagtgtatattttaacataagaggtgaggggggtgtaatt 10592767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 19547003 - 19547053
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||| ||   | ||||||||||||||||||||||    
T  19547003 tttctaatatgttttgaataaaagagaaagggagtgtatattttaacataa 19547053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 20096110 - 20096160
Alignment:
Q  5 taatatgttttgaataagaggagaggggagtgtatattttaacataaaaag 55  Q
    ||||||||||||||||| || | | | ||||||||||||||||||||||||    
T  20096110 taatatgttttgaataacagaatatgcgagtgtatattttaacataaaaag 20096160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 30605343 - 30605389
Alignment:
Q  25 gagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||| ||||||||||||||||||| |  ||||||||||||||||    
T  30605343 gagagggaagtgtatattttaacataagagtggaggggagtgtaatt 30605389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 32222095 - 32222133
Alignment:
Q  33 agtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  32222095 agtgtatattttaacataagaagggaagggagtgtaatt 32222133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 33979254 - 33979324
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||| | | ||||| | | |||||||||||||||||  ||||| |||| |||||    
T  33979254 tttctaatatgttttgaataaaatgggagggaaatatatattttaacataaaagaggaggagagtataatt 33979324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 37973541 - 37973471
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||| |||||||| ||| | | |||||||||||| |||||| |||| |  |||||||||    
T  37973541 tttctaatatgttttgcataagaggggagagaattgtatattttaatataaaaggggatgaaagtgtaatt 37973471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 48842028 - 48842065
Alignment:
Q  33 agtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  48842028 agtgtatattttaacat-aaaagggaggggagtgtaatt 48842065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 5984912 - 5984949
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgta 38  Q
    ||||||||||||||||||||| ||| ||||||||||||    
T  5984912 tttctaatatgttttgaataataggggaggggagtgta 5984949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 20612099 - 20612152
Alignment:
Q  18 ataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||| ||||||| ||||||||||||||||| | || |||| |||||||||    
T  20612099 ataagaggggaggggattgtatattttaacataagagggaagggaagtgtaatt 20612152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 1364051 - 1364095
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | | || ||||||||||||    
T  1364051 gaggggagtgtatattttaacataagaggagatgggagtgtaatt 1364095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 10888409 - 10888449
Alignment:
Q  33 agtgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    ||||||||||||||| ||| | |||||||||||||||||||    
T  10888409 agtgtatattttaacttaagaggggaggggagtgtaattta 10888449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 13623252 - 13623208
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||| ||||||||||||||||||| | ||||||| |||||||||    
T  13623252 gagggaagtgtatattttaacataagaggggagggaagtgtaatt 13623208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 32255125 - 32255081
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||| |||||||||||||| |||| ||||||||| |||||||||    
T  32255125 gagggtagtgtatattttaatataagaagggagggaagtgtaatt 32255081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 40974697 - 40974741
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | |||| || |||||||||    
T  40974697 gaggggagtgtatattttaacataagaggggacggaagtgtaatt 40974741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 44499432 - 44499396
Alignment:
Q  2 ttctaatatgttttgaataagaggagaggggagtgta 38  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  44499432 ttctaatatgttttgaataagaggggagggaagtgta 44499396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 45241278 - 45241234
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||| |||||||||||||||||||| |  ||||||||||||||||    
T  45241278 gaggagagtgtatattttaacataagagaggaggggagtgtaatt 45241234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 53329408 - 53329364
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||| |||||| ||||||| | |||||||    
T  53329408 gaggggagtgtatattttaatataaaaggggagggaaatgtaatt 53329364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 53333086 - 53333042
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||| |||||| ||||||| | |||||||    
T  53333086 gaggggagtgtatattttaatataaaaggggagggaaatgtaatt 53333042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 3e-25; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 20183461 - 20183391
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||    
T  20183461 tttctaatatgttttgaataagagggaaggggagtgtatattttaacataagaagggaggggagtgtaatt 20183391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 36742555 - 36742629
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatttact 75  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||    
T  36742555 tttctactatgttttgaataagaggggaggggagtgtatattttaacataagaggggaggggagtgtaatttact 36742629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 19408639 - 19408570
Alignment:
Q  2 ttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||    
T  19408639 ttctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggaggggagtgtaatt 19408570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 4877348 - 4877418
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||| ||||||||||    
T  4877348 tttctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggaggagagtgtaatt 4877418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 9017748 - 9017678
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||| | |||||||||||||||||    
T  9017748 tttctaatatgttttgaataagaggggagggaagtgtatattttaacataagaggggaggggagtgtaatt 9017678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 37334561 - 37334631
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||| |||||||||    
T  37334561 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaagggagggaagtgtaatt 37334631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 37658048 - 37658118
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| | |||||||||||||||||    
T  37658048 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaatt 37658118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 1199718 - 1199788
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| | || ||||||||||||||    
T  1199718 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagagggaaggggagtgtaatt 1199788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 21639119 - 21639049
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||| | ||||| |||||||||||    
T  21639119 tttctaatatgttttgaataagaggggaggagagtgtatattttaacataagaggggagtggagtgtaatt 21639049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 27028614 - 27028684
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||| |  ||||||||||||||||    
T  27028614 tttctaatatgttttgaataagaggagagaggagtatatattttaacataagagaggaggggagtgtaatt 27028684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 32458486 - 32458556
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||| |||||| |||||| ||||||||||    
T  32458486 tttctaatatgttttgaataagaggggagaggagtgtatattttaatataaaaggggaggagagtgtaatt 32458556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 35751617 - 35751547
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||| | |||| ||||||||||||    
T  35751617 tttctaatatgttttgattaagaggggaggggagtgtatattttaacataagaggggaagggagtgtaatt 35751547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 15175306 - 15175236
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||| |||||| ||||| ||||||||||||||||||| | ||||||| |||||||||    
T  15175306 tttctaatatgttttgaaaaagaggggagggaagtgtatattttaacataagaggggagggaagtgtaatt 15175236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 20570801 - 20570867
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgt 67  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||| | |||||| ||||||    
T  20570801 tttctaatatgttttgaataagaggggagtggagtgtatattttaacataagaggggaggagagtgt 20570867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 27979873 - 27979923
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27979873 tttctaatatgttttgaataagaggggaggggagtgtatattttaacataa 27979923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 31476938 - 31477008
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| || |  ||||||||||||||||||| | |||||||||||||||||    
T  31476938 tttctaatatgttttgaataagaggggatgaaagtgtatattttaacataagaggggaggggagtgtaatt 31477008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 6031322 - 6031392
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||| |  |||||||||    
T  6031322 tttctaatatgttttgaataagaggggagtggagtatatattttaacataagaagggatgaaagtgtaatt 6031392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 6048086 - 6048016
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||| |||||| ||||||||||||| |||| |||||||||||||||||||| | ||||||| |||||||||    
T  6048086 tttcaaatatggtttgaataagaggggaggagagtgtatattttaacataagaggggagggaagtgtaatt 6048016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 9118936 - 9118866
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||| ||| |  ||| ||||||||||||    
T  9118936 tttctaatatgttttgaataagaggggagaggagtgtatattttaacttaagagaggaagggagtgtaatt 9118866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 1405635 - 1405570
Alignment:
Q  4 ctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaa 69  Q
    ||||||| ||||||||||||||||||  |||||||||||||||||||| | | |||||||||||||    
T  1405635 ctaatatattttgaataagaggagagatgagtgtatattttaacataagaggtgaggggagtgtaa 1405570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 22731058 - 22731103
Alignment:
Q  26 agaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  22731058 agaggggagtgtatattttaacataagaagggaggggagtgtaatt 22731103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 5138399 - 5138328
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    |||||||||| |||||||||||| | |||||| || ||||||||||||||| || ||||||||||||||||||    
T  5138399 tttctaatatattttgaataagaagggagggg-gtatatattttaacataagaaaggaggggagtgtaattta 5138328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 32020566 - 32020495
Alignment:
Q  2 ttctaatatgttttgaataagaggagaggggagtgt--atattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||| ||||||||||||||||| |||||||||||  |||||||||||||| | ||||||||| |||||||    
T  32020566 ttctaaaatgttttgaataagaggggaggggagtgtatatattttaacataagaggggaggggaatgtaatt 32020495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 40027473 - 40027544
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaattt 72  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||||| || | ||||| ||| ||||||||    
T  40027473 tttctaatatattttgaataagaggggagggaagtgtatattttaacacaagaggggagaggaatgtaattt 40027544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 8572800 - 8572730
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||  ||| | ||||||||||||||||||| |   |||||||||||||||    
T  8572800 tttctaatatgttttgaataagagaggagtgaagtgtatattttaacataagagatgaggggagtgtaatt 8572730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15144513 - 15144463
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    |||||||||||||| |||||| ||||||||| |||||||||||||||||||    
T  15144513 tttctaatatgtttagaataaaaggagagggaagtgtatattttaacataa 15144463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 18524337 - 18524407
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||| |||||||||||||| ||||||| | ||||||||||||||| | |||||| || |||||||    
T  18524337 tttctaatatattttgaataagaggggaggggactatatattttaacataagaggggaggcgaatgtaatt 18524407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 20540401 - 20540331
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||||| ||||| |||| |  |||||||||    
T  20540401 tttctaatatgttttgaataaaaggggaggagagtgtatattttaacttaaaaggggaagatagtgtaatt 20540331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20691771 - 20691817
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaac 47  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  20691771 tttctaatatgttttgaataataggggaggggagtgtatattttaac 20691817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 24625468 - 24625538
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| |  ||||||||||||| |||| ||| | |||||||| ||||||||    
T  24625468 tttctaatatgttttgaataagagggggtgggagtgtatattctaacttaagaggggaggggggtgtaatt 24625538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 24763453 - 24763391
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggagggga 63  Q
    ||||||||||||||||||||||||  || ||||||||||||||||| |||| | |||||||||    
T  24763453 tttctaatatgttttgaataagagatgatgggagtgtatattttaagataagaggggagggga 24763391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 42598961 - 42599031
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||| |||| ||||||||| ||||| ||||||||||||||||||| |  ||||| ||||||||||    
T  42598961 tttctaatatattttcaataagaggggagggaagtgtatattttaacataagagtggaggagagtgtaatt 42599031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 13280121 - 13280190
Alignment:
Q  2 ttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||| |||| |||||| || ||||| ||||||||||||||||||| | ||||||| |||||||||    
T  13280121 ttctaatatattttaaataaggggggagggaagtgtatattttaacataagaggggagggcagtgtaatt 13280190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 20570212 - 20570159
Alignment:
Q  18 ataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||| ||||||||||||||||||||||||| |  ||||||||||||||||    
T  20570212 ataagaggggaggggagtgtatattttaacataagagaggaggggagtgtaatt 20570159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 4054827 - 4054781
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaac 47  Q
    ||||||||||||||||||||||| | ||||| |||||||||||||||    
T  4054827 tttctaatatgttttgaataagatgggagggaagtgtatattttaac 4054781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 13686595 - 13686665
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||| |||||||||||||| || | ||| |||||||||||||||| | |||| | ||||||||||    
T  13686595 tttctaatatattttgaataagaggggatgagagggtatattttaacataagaggggatgagagtgtaatt 13686665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17967920 - 17967870
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||| ||||||||||||||||||| || || |||||||||||||||||||    
T  17967920 tttctgatatgttttgaataagaggggatggaagtgtatattttaacataa 17967870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30782814 - 30782764
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||| ||||   ||||||||||||||||||    
T  30782814 tttctaatatgttttgaataagaggggaggaacgtgtatattttaacataa 30782764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 40957392 - 40957458
Alignment:
Q  5 taatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||  |||| || ||||||||||||| ||| | |||||| ||||||||||    
T  40957392 taatatgttttgaataagagaggaggagattgtatattttaacctaagaggggaggtgagtgtaatt 40957458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 15175878 - 15175915
Alignment:
Q  34 gtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||| |||||||||||||||||||    
T  15175878 gtgtatattttaacataagaagggaggggagtgtaatt 15175915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 16614230 - 16614193
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgta 38  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  16614230 tttctaatatgttttgaataagaggggaggggagtgta 16614193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 36762757 - 36762794
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgta 38  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  36762757 tttctaatatgttttgaataagaggggaggggagtgta 36762794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 4717272 - 4717316
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| |||||| | ||||||||||    
T  4717272 gaggggagtgtatattttaacataagaagggatgagagtgtaatt 4717316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 27979306 - 27979262
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||| ||||||||||||||||| | |||||||||||||||||    
T  27979306 gaggggaatgtatattttaacataagaggggaggggagtgtaatt 27979262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 36737448 - 36737492
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||| ||||||||||||||||||| | |||||||||||||||||    
T  36737448 gagggaagtgtatattttaacataagaggggaggggagtgtaatt 36737492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 17780987 - 17781038
Alignment:
Q  1 tttctaatatgttttgaataagaggaga-ggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||| ||  || |||||||||||||||||||    
T  17780987 tttctaatatgttttgaataagaggggataggaagtgtatattttaacataa 17781038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 38498000 - 38498073
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtata---ttttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| || ||| || ||||   ||||||||||| | |||||| ||||||||||    
T  38498000 tttctaatatgttttgaataagaggggaagggggtttatatatttttaacataagaggggaggagagtgtaatt 38498073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 5345109 - 5345175
Alignment:
Q  5 taatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||||  | | ||||||||||||||| |   ||| |||||||||||    
T  5345109 taatatgttttgaataagaggagaggaaattatatattttaacataagagatgagaggagtgtaatt 5345175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 14594716 - 14594786
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||| ||||  ||| | | ||||||||||||||||| | ||||| || ||||||||    
T  14594716 tttctaatatgttttgaatgagagaggagtgaaatgtatattttaacataagaggggagaggtgtgtaatt 14594786  T

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Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20259434 - 20259384
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||| | |||   |||||||||||||||||||    
T  20259434 tttctaatatgttttgaataagaagggagataagtgtatattttaacataa 20259384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 30920620 - 30920586
Alignment:
Q  4 ctaatatgttttgaataagaggagaggggagtgta 38  Q
    |||||||||||||||||||||| ||||||||||||    
T  30920620 ctaatatgttttgaataagaggggaggggagtgta 30920586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 1198500 - 1198455
Alignment:
Q  33 agtgtatattttaacataaaaagggaggggagtgtaatttactcta 78  Q
    ||||||||||||||| ||| | ||||||||||||||| ||||||||    
T  1198500 agtgtatattttaacttaagaggggaggggagtgtaaattactcta 1198455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 20570233 - 20570192
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgta 68  Q
    ||||||| ||||||||||||||||| | ||||||||||||||    
T  20570233 gaggggaatgtatattttaacataagaggggaggggagtgta 20570192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 3933407 - 3933355
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaa 53  Q
    |||||||||| |||||||||| ||| ||| | |||||||||||||| ||||||    
T  3933407 tttctaatatattttgaataaaaggggagagaagtgtatattttaaaataaaa 3933355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 5701067 - 5701139
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    ||||||||||||||||   || ||| ||||| |||||||||||||| |||| | ||||||  |||||||||||    
T  5701067 tttctaatatgttttgctaaaaaggggagggaagtgtatattttaatataagaggggaggatagtgtaattta 5701139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 8573348 - 8573392
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | || ||| ||||||||||    
T  8573348 gaggggagtgtatattttaacataagagggaaggagagtgtaatt 8573392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 10688235 - 10688296
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggag 64  Q
    |||||||||| |||||||||||||| |||||  || ||||||||||||||| |  |||||||||    
T  10688235 tttctaatatattttgaataagaggggaggg--gtatatattttaacataagagaggaggggag 10688296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 20184013 - 20184057
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||| |||||||||| |||||||| | |||||||||||||||||    
T  20184013 gagggaagtgtatattgtaacataagaggggaggggagtgtaatt 20184057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 36762189 - 36762145
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||| |||||||||||||| |||| | |||||||||||||||||    
T  36762189 gagggaagtgtatattttaaaataagaggggaggggagtgtaatt 36762145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 3e-25; HSPs: 95)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 35667257 - 35667327
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||    
T  35667257 tttctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggaggggagtgtaatt 35667327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 37423881 - 37423809
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||| | |||||||||||||||||||    
T  37423881 tttctaatatgttttgaataagaggggtggggagtgtatattttaacataagaggggaggggagtgtaattta 37423809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 17722848 - 17722781
Alignment:
Q  4 ctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||    
T  17722848 ctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggaggggagtgtaatt 17722781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4950569 - 4950635
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgt 67  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||    
T  4950569 tttctaatatgttttgaataagaggggaggggagtgtatattttaacataagaagagaggggagtgt 4950635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 6233077 - 6233147
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| | |||||||||||||||||    
T  6233077 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaatt 6233147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 7797047 - 7796977
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||  | |||||||||||||||||    
T  7797047 tttctaatatgttttgaataagaggagagggaagtgtatattttaacataggaggggaggggagtgtaatt 7796977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 8192964 - 8193034
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| | |||||||||||||||||    
T  8192964 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaatt 8193034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 10155604 - 10155534
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||    
T  10155604 tttctaatatgttttgaataagaggggagggaagtgtatattttaacttaaaaagggaggagagtgtaatt 10155534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 16960306 - 16960236
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||| |||||||||    
T  16960306 tttctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggagggaagtgtaatt 16960236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 19313987 - 19314057
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||| | |||||||||||||||||    
T  19313987 tttctaatatgttttgaataagaggggagaggagtgtatattttaacataagacgggaggggagtgtaatt 19314057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 26705643 - 26705713
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||    
T  26705643 tttctaatatgttttgaataagaggggaggggagtgtatattttaacataagagaggaggggagtgtaatt 26705713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 33047203 - 33047273
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||| | |||||||||||||||||    
T  33047203 tttctaatatgttttgaataagaggggaagggagtgtatattttaacataagaggggaggggagtgtaatt 33047273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 35667730 - 35667800
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||| | |||||||||||||||||    
T  35667730 tttctaatatgttttgaataagagggggggggagtgtatattttaacataagaggggaggggagtgtaatt 35667800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 44665159 - 44665229
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||    
T  44665159 tttctaatatattttgaataagaggggaggggagtgtatattttaacataaaaggggaggggagcgtaatt 44665229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 796484 - 796414
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||| ||| | |||||||||||||||||    
T  796484 tttctaatatcttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaatt 796414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 13395290 - 13395220
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||| ||| | |||||||||||||||||    
T  13395290 tttctaatatgttttgaataagaggggagggaagtgtatattttaacttaagaggggaggggagtgtaatt 13395220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 30192610 - 30192540
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||| | |||||| ||||||||||    
T  30192610 tttctaatatgttttgaataagaggggagggaagtgtatattttaacataagaggggaggagagtgtaatt 30192540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 37708876 - 37708806
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||| | ||||| |||||||||||    
T  37708876 tttctattatgttttgaataagaggggaggggagtgtatattttaacataagaggggagaggagtgtaatt 37708806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 45847236 - 45847166
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||| | ||||||| |||||||||    
T  45847236 tttctaatatgttttgaataagaggggaggggattgtatattttaacataagaggggagggaagtgtaatt 45847166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 46095507 - 46095437
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| | |||||| ||||||||||    
T  46095507 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggagagtgtaatt 46095437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 47030456 - 47030526
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| | |||||| ||||||||||    
T  47030456 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggagagtgtaatt 47030526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 721423 - 721353
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||||||  |||| |||||||||||||| |||| | |||||||||||||||||    
T  721423 tttctaatatgttttgaataagagggaagggaagtgtatattttaatataagaggggaggggagtgtaatt 721353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 23308899 - 23308829
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||  ||||||||||||||| ||| | |||||||||||||||||    
T  23308899 tttctaatatgttttgaataagaggggaggaaagtgtatattttaacttaagaggggaggggagtgtaatt 23308829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 26809020 - 26809090
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||| | | | |||||||||||||||    
T  26809020 tttctaatatgttttgaataagaggggagggaagtgtatattttaacatgagatgtgaggggagtgtaatt 26809090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 8138971 - 8139036
Alignment:
Q  6 aatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  | ||||||||| |||||||    
T  8138971 aatatgttttgaataagaggggaggggagtgtatattttaacatatgaggggaggggattgtaatt 8139036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 36651244 - 36651313
Alignment:
Q  2 ttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||| | ||||  |||||||| ||||||||||||| ||||||||||||||||    
T  36651244 ttctaatatgttttgaataagaagggaggaaagtgtatactttaacataaaaaaggaggggagtgtaatt 36651313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 36897559 - 36897489
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||| ||||| ||||  |||||||||||||    
T  36897559 tttctaatatattttgaataagaggggaggggagtgtatattttaacttaaaagggga--ggagtgtaattta 36897489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 54092275 - 54092203
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatttac 74  Q
    ||||||||||||||||||||||||| ||||| |||||||||||| |||||| | |||| |||||||||||||||    
T  54092275 tttctaatatgttttgaataagaggggagggaagtgtatatttt-acataagaggggaagggagtgtaatttac 54092203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 6233771 - 6233830
Alignment:
Q  12 ttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||| |||||||||||||||||||||||| ||||| | ||||||||||||    
T  6233771 ttttgaataagaggggaggggagtgtatattttaacatagaaaggaatgggagtgtaatt 6233830  T

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Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 755500 - 755570
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||||||  |||| |||||||||||||| |||| | ||||||||||| |||||    
T  755500 tttctaatatgttttgaataagagggaagggaagtgtatattttaatataagaggggaggggagtataatt 755570  T

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Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7166052 - 7166122
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||| ||| |  |||||| |||||||||    
T  7166052 tttctgatatgttttgaataagaggggaggggagtgtatattttaacttaagagaggagggaagtgtaatt 7166122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 13482773 - 13482843
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| || || ||||||||||| ||||||| |  ||||||||||||||||    
T  13482773 tttctaatatgttttgaataagaggggaaggaagtgtatatttaaacataagagaggaggggagtgtaatt 13482843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 13771819 - 13771769
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  13771819 tttctaatatgttttgaataagagaggaggggagtgtatattttaacataa 13771769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17729612 - 17729562
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  17729612 tttctaatatgttttgaataagaggcgaggggaatgtatattttaacataa 17729562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 28464302 - 28464232
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||| ||| || || ||||||||||||||||||| | ||||||| |||||||||    
T  28464302 tttctaatatgttttgaataaaaggggatggaagtgtatattttaacataagaggggagggaagtgtaatt 28464232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 33032261 - 33032191
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||||||||| | ||||| | |||||||||    
T  33032261 tttctaatatgttttgaataaaaggggagaggagtgtatattttaacataataggggagagaagtgtaatt 33032191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 35667544 - 35667610
Alignment:
Q  5 taatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||| || ||||||||||||||||||||||||| | ||||||  |||||||||    
T  35667544 taatatgttttgaataagtggggaggggagtgtatattttaacataagaggggaggaaagtgtaatt 35667610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 37423244 - 37423174
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||  | || |||||||||||||| || ||||||||||||||||    
T  37423244 tttctaatatgttttgaataagaggggaggaaactgcatattttaacataagaatggaggggagtgtaatt 37423174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 25008319 - 25008272
Alignment:
Q  3 tctaatatgttttgaataagaggagaggggagtgtatattttaacata 50  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||    
T  25008319 tctaatatgttttgaataagaggggaagggagtgtatattttaacata 25008272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 616109 - 616175
Alignment:
Q  5 taatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||| || | |||||||||||||||| ||| |  ||||||||||||||||    
T  616109 taatatgttttgaataagaggggatgagagtgtatattttaacttaagagaggaggggagtgtaatt 616175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9784687 - 9784637
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||||    
T  9784687 tttctaatatgttttgaataagagaggaggagagtgtatattttaacataa 9784637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 76
Target Start/End: Original strand, 17723426 - 17723468
Alignment:
Q  34 gtgtatattttaacataaaaagggaggggagtgtaatttactc 76  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  17723426 gtgtatattttaacataaaaggggaggggagtgtaatttactc 17723468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 23721480 - 23721411
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||| || ||||  | ||||||||||||||||||| |||||||| ||||||||    
T  23721480 tttctaatatgttttgaataagtggggaggaaaatgtatattttaacataaaaggggagggg-gtgtaatt 23721411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 49621321 - 49621371
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||| ||||    
T  49621321 tttctaatatgttttgaataagaggggagggaagtgtatattttaaaataa 49621371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 50824729 - 50824659
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| || | |||||||||||||||||||| |  | || |||||||||||    
T  50824729 tttctaatatgttttgaataagaggggatgagagtgtatattttaacataagagagaagtggagtgtaatt 50824659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 55069488 - 55069538
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||| ||||| | |||||||||||||||||    
T  55069488 tttctaatatgttttgaataagaggggagggaattgtatattttaacataa 55069538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 56310041 - 56310110
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||| |||||||||||||||||||| |||||| |||||||||||||||||| |  ||||| ||||||||||    
T  56310041 tttcaaatatgttttgaataagaggggagggg-gtgtatattttaacataagagaggaggagagtgtaatt 56310110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 29979683 - 29979735
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaa 53  Q
    ||||||||||||||| ||||||||||||| ||||||| || ||||||||||||    
T  29979683 tttctaatatgttttaaataagaggagagaggagtgtctaatttaacataaaa 29979735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 32448375 - 32448304
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    ||||||||||||||| ||||||||| |||| || ||||||||||||||||| | |||||| | ||||||||||    
T  32448375 tttctaatatgttttaaataagaggggaggagaatgtatattttaacataagaggggaggag-gtgtaattta 32448304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 36898099 - 36898143
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||||| | |||||||||||||||    
T  36898099 gaggggagtgtatattttaacataaaaggagaggggagtgtaatt 36898143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 55068918 - 55068874
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | |||||||||||||||||    
T  55068918 gaggggagtgtatattttaacataagaggggaggggagtgtaatt 55068874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 35854203 - 35854250
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaaca 48  Q
    |||||||||||||||||||||||||| |||| |||||||| |||||||    
T  35854203 tttctaatatgttttgaataagaggaaagggaagtgtatagtttaaca 35854250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 55139452 - 55139377
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatttactc 76  Q
    ||||| |||| ||||||||||||||  |  ||||||||||||||||||||| | | ||| ||||||||||||||||    
T  55139452 tttctgatatattttgaataagagggaaatggagtgtatattttaacataagaggagagaggagtgtaatttactc 55139377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 4649678 - 4649743
Alignment:
Q  5 taatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||| ||||||||||||| |||| | ||||||||||||||||| || || |||||||||||||||    
T  4649678 taatatattttgaataagagaagagtgaagtgtatattttaacat-aagagcgaggggagtgtaatt 4649743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12251326 - 12251372
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaac 47  Q
    |||||||||||||||||||||||||  |||| |||||||||||||||    
T  12251326 tttctaatatgttttgaataagagggaagggaagtgtatattttaac 12251372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 26619513 - 26619570
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggag 59  Q
    |||||||||| ||||||||||| || |||| ||||||||| ||||||||||||||||||    
T  26619513 tttctaatattttttgaataaggggtgaggagagtgtata-tttaacataaaaagggag 26619570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 77 - 111
Target Start/End: Original strand, 32930083 - 32930117
Alignment:
Q  77 tattaaattacagcttcatcactcatgtccagttg 111  Q
    |||||||||||||||||||||||||||||||||||    
T  32930083 tattaaattacagcttcatcactcatgtccagttg 32930117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 37735453 - 37735503
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    |||||||||||||||||||||||| |||| | |||||||||||||| ||||    
T  37735453 tttctaatatgttttgaataagagaagagagaagtgtatattttaatataa 37735503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 42074404 - 42074454
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||| | | ||||| |||||||||||||||    
T  42074404 tttctaatatgttttgaataagaggggggaggagtatatattttaacataa 42074454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 47931204 - 47931274
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||| |||||||||||||  | | ||||||||||||||||||||| | |||||  ||||||||||    
T  47931204 tttctaatatattttgaataagagaggtgaggagtgtatattttaacataagaggggagatgagtgtaatt 47931274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 49702477 - 49702407
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| |||  || |||||||||||| |||| | ||||| | |||||||||    
T  49702477 tttctaatatgttttgaataagaggggagaagattgtatattttaatataagaggggagagaagtgtaatt 49702407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 36408524 - 36408601
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaaggga-ggggagtgtaatttactct 77  Q
    ||||| ||||||||||||||||||| ||||||| ||| |||||||  |||| | |||| |||| ||||||||||||||    
T  36408524 tttctgatatgttttgaataagaggggaggggattgtgtattttatgataagaggggagggggggtgtaatttactct 36408601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 36422690 - 36422767
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaaggga-ggggagtgtaatttactct 77  Q
    ||||| ||||||||||||||||||| ||||||| ||| |||||||  |||| | |||| |||| ||||||||||||||    
T  36422690 tttctgatatgttttgaataagaggggaggggattgtgtattttatgataagaggggagggggggtgtaatttactct 36422767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 46490145 - 46490096
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacata 50  Q
    |||||||||| ||||| |||||||||||| | ||||||||||||||||||    
T  46490145 tttctaatatattttgcataagaggagagtgaagtgtatattttaacata 46490096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 7797613 - 7797657
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||||    
T  7797613 gagggaagtgtatattttaacataagaagggaggggaatgtaatt 7797657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 13482258 - 13482214
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | |||||| ||||||||||    
T  13482258 gaggggagtgtatattttaacataagaggggaggagagtgtaatt 13482214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 16192315 - 16192359
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| |  ||||||||||||||||    
T  16192315 gaggggagtgtatattttaacataagagaggaggggagtgtaatt 16192359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19854778 - 19854830
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaa 53  Q
    |||| |||||||||||||||||||| ||| | | |||||||||||||||||||    
T  19854778 tttcaaatatgttttgaataagaggggagagaaatgtatattttaacataaaa 19854830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 20545018 - 20545062
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||| ||||||||||||||||| | |||||||||||||||||    
T  20545018 gaggggaatgtatattttaacataagaggggaggggagtgtaatt 20545062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 23722051 - 23722095
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||| ||||||||||||||||||| | |||||||||||||||||    
T  23722051 gagggtagtgtatattttaacataagaggggaggggagtgtaatt 23722095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 33 - 76
Target Start/End: Original strand, 796997 - 797040
Alignment:
Q  33 agtgtatattttaacataaaaagggaggggagtgtaatttactc 76  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||    
T  796997 agtgtatattttaacttaagaggggaggggagtgtaatttactc 797040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 54096718 - 54096757
Alignment:
Q  30 gggagtgtatattttaacataaaaagggaggggagtgtaa 69  Q
    |||||||||||||||||||||||| |||||| ||||||||    
T  54096718 gggagtgtatattttaacataaaaggggaggagagtgtaa 54096757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 17201918 - 17201968
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    |||||||||| |||||||||||| | ||||| |||||| ||||||||||||    
T  17201918 tttctaatatattttgaataagatgggagggaagtgtagattttaacataa 17201968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 22474933 - 22474891
Alignment:
Q  5 taatatgttttgaataagaggagaggggagtgtatattttaac 47  Q
    |||||||||||| |||||||||||||  |||||||||||||||    
T  22474933 taatatgttttgcataagaggagaggaaagtgtatattttaac 22474891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 23269241 - 23269199
Alignment:
Q  29 ggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||| ||| | |||||||||||||||||    
T  23269241 ggggagtgtatattttaacttaagaggggaggggagtgtaatt 23269199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 51268553 - 51268599
Alignment:
Q  31 ggagtgtatattttaacataaaaagggaggggagtgtaatttactct 77  Q
    ||||||||||||||||||||| |  |||| |||||||||||||||||    
T  51268553 ggagtgtatattttaacataagagaggagaggagtgtaatttactct 51268599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 55814417 - 55814367
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||| ||||||||||||||||| ||||| | ||||||||| |||||||    
T  55814417 tttctaagatgttttgaataagaggggagggaaatgtatatttaaacataa 55814367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 4950006 - 4949965
Alignment:
Q  30 gggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||| |  ||||||||||||||||    
T  4950006 gggagtgtatattttaacataagagaggaggggagtgtaatt 4949965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 21037926 - 21037975
Alignment:
Q  2 ttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||| |||| ||||| ||| ||||||||| |||||||||||||||    
T  21037926 ttctaatatattttaaataaaaggggaggggagtatatattttaacataa 21037975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 48373063 - 48373140
Alignment:
Q  1 tttctaatatgttttgaataagaggagagg-----ggagtgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    |||||||||| |||||||||||||| ||||     ||||||||||||||||| ||||| |  |||||| |||||||||    
T  48373063 tttctaatatattttgaataagaggggaggggaggggagtgtatattttaacttaaaatgaaaggggattgtaattta 48373140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 81
Target Start/End: Original strand, 7384228 - 7384256
Alignment:
Q  53 aagggaggggagtgtaatttactctatta 81  Q
    |||||||||||||||||||||||||||||    
T  7384228 aagggaggggagtgtaatttactctatta 7384256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 7478771 - 7478723
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacat 49  Q
    |||||||||||||||||| || | | ||||||| |||||||||||||||    
T  7478771 tttctaatatgttttgaaaaaaaagggaggggaatgtatattttaacat 7478723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 16191751 - 16191715
Alignment:
Q  2 ttctaatatgttttgaataagaggagaggggagtgta 38  Q
    |||||||||||||||||||||||  ||||||||||||    
T  16191751 ttctaatatgttttgaataagagaggaggggagtgta 16191715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 17730180 - 17730224
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||    
T  17730180 gagggtagtgtatattttaacataaaaggagaggagagtgtaatt 17730224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 19313420 - 19313376
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | |||| | ||||||||||    
T  19313420 gaggggagtgtatattttaacataagaggggatgagagtgtaatt 19313376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 25010061 - 25010101
Alignment:
Q  31 ggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||| | |||||| ||||||||||    
T  25010061 ggagtgtatattttaacataagaggggaggagagtgtaatt 25010101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 32448940 - 32448984
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||| ||||||||||||||||||| | ||||| |||||||||||    
T  32448940 gagggaagtgtatattttaacataagaggggagtggagtgtaatt 32448984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 35667381 - 35667425
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||| ||||||||||||||||||| | ||||||| |||||||||    
T  35667381 gagggaagtgtatattttaacataagaggggagggaagtgtaatt 35667425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 36721407 - 36721359
Alignment:
Q  6 aatatgttttgaataaga-ggagaggggagtgtatattttaacataaaa 53  Q
    |||||||||||||||||| ||||| | |||| |||||||||||||||||    
T  36721407 aatatgttttgaataagacggagatgagagtatatattttaacataaaa 36721359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 37147814 - 37147770
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||| ||||||||||||||||||| | ||||| |||||||||||    
T  37147814 gagggaagtgtatattttaacataagaggggagaggagtgtaatt 37147770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 37424446 - 37424490
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||| |||||||||||||||||||| | ||||||||| |||||||    
T  37424446 gaggtgagtgtatattttaacataagaggggaggggaatgtaatt 37424490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 81
Target Start/End: Original strand, 46096176 - 46096204
Alignment:
Q  53 aagggaggggagtgtaatttactctatta 81  Q
    |||||||||||||||||||||||||||||    
T  46096176 aagggaggggagtgtaatttactctatta 46096204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 81
Target Start/End: Original strand, 46138677 - 46138705
Alignment:
Q  53 aagggaggggagtgtaatttactctatta 81  Q
    |||||||||||||||||||||||||||||    
T  46138677 aagggaggggagtgtaatttactctatta 46138705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 51019726 - 51019682
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||| ||||||||||||||||||| | |||||| ||||||||||    
T  51019726 gagggaagtgtatattttaacataagaggggaggagagtgtaatt 51019682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 53102740 - 53102784
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||| ||| ||||||||||||||| | |||||||||||||||||    
T  53102740 gagggaagtatatattttaacataagatgggaggggagtgtaatt 53102784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 3e-25; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7939967 - 7940037
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  7939967 tttctaatatgttttgaataagaggggaggggagtgtatattttaacataaaaggggaggagagtgtaatt 7940037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 10357097 - 10357164
Alignment:
Q  4 ctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||    
T  10357097 ctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggaggggagtgtaatt 10357164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 11796240 - 11796170
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||| | |||||||||||||||||    
T  11796240 tttctaatatgttttgaataagaggggaggggagtgtacattttaacataagaggggaggggagtgtaatt 11796170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 17829151 - 17829081
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||| |||||||||||    
T  17829151 tttctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggagtggagtgtaatt 17829081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 20894254 - 20894324
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| | |||||||||||||||||    
T  20894254 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaatt 20894324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 34173146 - 34173076
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||| |||||||||    
T  34173146 tttctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggagggtagtgtaatt 34173076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 35899238 - 35899168
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| | |||||||||||||||||    
T  35899238 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaatt 35899168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 33146676 - 33146743
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgta 68  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||| ||||||||    
T  33146676 tttctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggagaggagtgta 33146743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 552481 - 552551
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||   |||||||||||||||||    
T  552481 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaaggggggaggggagtgtaatt 552551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 15006530 - 15006468
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggagggga 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||    
T  15006530 tttctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggagggga 15006468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 38972564 - 38972494
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||  | |||||||||||||||||    
T  38972564 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaggaggggaggggagtgtaatt 38972494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5474724 - 5474664
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggg 61  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||    
T  5474724 tttctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggaggg 5474664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 11051656 - 11051589
Alignment:
Q  4 ctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |  || |||||||||||||    
T  11051656 ctaatatgttttgaataagaggggaggggagtgtatattttaacataagagaggtggggagtgtaatt 11051589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 11563719 - 11563649
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||| ||||||| ||||| ||||||||||||||||||| | || ||||||||||||||    
T  11563719 tttctaatatgttttgattaagaggggagggaagtgtatattttaacataagagggtaggggagtgtaatt 11563649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 31597789 - 31597859
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||| ||| ||||| |||||||||||||| |||| |||||||| ||||||||||    
T  31597789 tttctaatatgttttgaataaaaggggagggaagtgtatattttaatataagaagggaggagagtgtaatt 31597859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 34248036 - 34248106
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||| | ||||||||||||||| ||| | |||||||||||||||||    
T  34248036 tttctaatatgttttgaataagaggggagagaagtgtatattttaacttaagaggggaggggagtgtaatt 34248106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 37199024 - 37198974
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  37199024 tttctaatatgttttgaataagaggggaggggagtgtatattttaacataa 37198974  T

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Target: chr2; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 41078132 - 41078199
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgta 68  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||| |  ||||| |||||||    
T  41078132 tttctattatgttttgaataagaggggaggggagtgtatattttaacataagagaggaggagagtgta 41078199  T

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Target: chr2; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 42791583 - 42791516
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgta 68  Q
    ||||||||||||||||||||||||| ||||||| | ||||||||||||||| | ||||||||| ||||    
T  42791583 tttctaatatgttttgaataagaggggaggggattatatattttaacataagaggggaggggattgta 42791516  T

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Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 3045028 - 3044958
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||||||| | | |||| ||||||||||    
T  3045028 tttctaatatgttttgaataagatggaaggggagtgtatattttaacataagaggtgaggagagtgtaatt 3044958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 4437412 - 4437342
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||||||  |||||| ||||||||||||||||| | |||| || |||||||||    
T  4437412 tttctaatatgttttgaataagagggaaggggattgtatattttaacataagaggggatggaagtgtaatt 4437342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 13873416 - 13873366
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  13873416 tttctaatatgttttgaataagagaggaggggagtgtatattttaacataa 13873366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 14013541 - 14013491
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  14013541 tttctaatatgttttgaataagagaggaggggagtgtatattttaacataa 14013491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 37009091 - 37009025
Alignment:
Q  5 taatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||| ||||||||| ||| | ||||||||||||||||||| | |||||||||||||||||    
T  37009091 taatatgttttaaataagaggggagagaagtgtatattttaacataagaggggaggggagtgtaatt 37009025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 38910771 - 38910705
Alignment:
Q  5 taatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||| ||| | ||||||||||||||||||| |  ||||||||||||||||    
T  38910771 taatatgttttgaataagaggggagtgaagtgtatattttaacataagagaggaggggagtgtaatt 38910705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 8726826 - 8726777
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacata 50  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  8726826 tttctaatatgttttgaataagatgagaggagagtgtatattttaacata 8726777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 18467877 - 18467800
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatttactcta 78  Q
    |||||||| |||||||||||| ||| || || |||||||| |||||||||||| || |||||||||||||||| ||||    
T  18467877 tttctaatctgttttgaataaaaggtgatggaagtgtataatttaacataaaagggaaggggagtgtaatttattcta 18467800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 40768934 - 40768882
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaa 53  Q
    ||||||||||||||||||||  ||| |||||||||||||||||||||||||||    
T  40768934 tttctaatatgttttgaatagaaggggaggggagtgtatattttaacataaaa 40768882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 41521645 - 41521700
Alignment:
Q  5 taatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggagg 60  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||| | ||||||    
T  41521645 taatatgttttaaataagaggggaggggagtgtatattttaacataagaggggagg 41521700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 3514899 - 3514853
Alignment:
Q  5 taatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  3514899 taatatgttttgaataagaggggaggggggtgtatattttaacataa 3514853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 11563897 - 11563827
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||| |||||||||||||||||||| || || ||||||||||||||||||| | |||| | ||||||||||    
T  11563897 tttccaatatgttttgaataagaggggaaggaagtgtatattttaacataagaggggatgagagtgtaatt 11563827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 16599625 - 16599567
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggag 59  Q
    |||||||||||||||||||||||| | | || ||||||||||||||||||| |||||||    
T  16599625 tttctaatatgttttgaataagagaataaggaagtgtatattttaacataagaagggag 16599567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 18997165 - 18997235
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||| |||| ||||||||||||| | |||||||||||||||||||||   ||||| |||||||||    
T  18997165 tttctaatatattttaaataagaggagagagaagtgtatattttaacataaaatatgagggaagtgtaatt 18997235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 26196134 - 26196084
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||| ||||| || ||||||||||||||||    
T  26196134 tttctaatatgttttgaataagaggggagggaagcgtatattttaacataa 26196084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 31363994 - 31363924
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||| ||||  ||||| ||||||||||||||||||| | || ||||| ||||||||    
T  31363994 tttctaatatgttttgaatgagagaggagggaagtgtatattttaacataagagggaaggggtgtgtaatt 31363924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 37330348 - 37330398
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||| || | ||||||||||||||||||||    
T  37330348 tttctaatatgttttgaataagaggggatgagagtgtatattttaacataa 37330398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 43657008 - 43656938
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||| || |||| |||||||||||||||| ||| | || | ||||||||||||    
T  43657008 tttctaatatgttttgaataagtggggaggagagtgtatattttaacttaagatggaatgggagtgtaatt 43656938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 64413 - 64368
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaa 46  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||    
T  64413 tttctaatatgttttgaataagaggggagggaagtgtatattttaa 64368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 37199599 - 37199643
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | |||||||||||||||||    
T  37199599 gaggggagtgtatattttaacataagaggggaggggagtgtaatt 37199643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 43439227 - 43439179
Alignment:
Q  3 tctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||||    
T  43439227 tctaatatgttttgaataagaggggacgagagtgtatattttaacataa 43439179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 16111141 - 16111210
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||| ||||||||||||||||| ||| | ||||||||||||||| ||| |  ||||||||||||||||    
T  16111141 tttctaacatgttttgaataagagg-gagagaagtgtatattttaacttaagagtggaggggagtgtaatt 16111210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 22606408 - 22606366
Alignment:
Q  9 atgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||| ||||| |||||||||||||||||||    
T  22606408 atgttttgaataagaggggagggaagtgtatattttaacataa 22606366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 24387101 - 24387031
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||  |||||||||||||| ||||||| |||||| |||||| || | | ||||||||||    
T  24387101 tttctaatatgttttacataagaggagagggaagtgtatgttttaatataaaagggaaagagagtgtaatt 24387031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 37009659 - 37009705
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    ||||||||||||||||||||||||| | ||||| |||||||||||||    
T  37009659 gaggggagtgtatattttaacataagaggggagaggagtgtaattta 37009705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 40020728 - 40020778
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    |||||||||||||||||| |||||| ||| | |||||||||||||||||||    
T  40020728 tttctaatatgttttgaaaaagaggggagtgaagtgtatattttaacataa 40020778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 15890750 - 15890705
Alignment:
Q  26 agaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||| ||||||||||||||||||||||| ||||||| |||||||||    
T  15890750 agagaggagtgtatattttaacataaaaggggagggaagtgtaatt 15890705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 31709710 - 31709783
Alignment:
Q  1 tttctaatatgttttgaataagaggag-aggggagtgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    |||||||||||||||||| |||||| | |||  | ||||||||||||||||| | ||||| |||||||||||||    
T  31709710 tttctaatatgttttgaaaaagagggggaggaaaatgtatattttaacataagaggggagaggagtgtaattta 31709783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 33886395 - 33886338
Alignment:
Q  12 ttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaa 69  Q
    |||||||||| || || |||||||||||||||||||| || ||||||||| |||||||    
T  33886395 ttttgaataaaagaagcggggagtgtatattttaacacaataagggagggaagtgtaa 33886338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 40947503 - 40947462
Alignment:
Q  30 gggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||||| |||||| ||||||||||    
T  40947503 gggagtgtatattttaacataaaaggggaggagagtgtaatt 40947462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 41521697 - 41521746
Alignment:
Q  22 gaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||||||||||| |||||| | || |||||||    
T  41521697 gaggagaggggagtgtatattttaacataagaagggaagagaatgtaatt 41521746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 3515472 - 3515516
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | |||||||| ||||||||    
T  3515472 gaggggagtgtatattttaacataagaggggaggggggtgtaatt 3515516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 6229884 - 6229928
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | || ||||||||||||||    
T  6229884 gaggggagtgtatattttaacataagagggaaggggagtgtaatt 6229928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 8313726 - 8313686
Alignment:
Q  31 ggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  8313726 ggagtgtatattttaacataagaggggaggggagtgtaatt 8313686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11942911 - 11942963
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaa 53  Q
    ||||| ||||||||| ||||||||| || || |||||||||||||||||||||    
T  11942911 tttctcatatgttttaaataagaggggatggaagtgtatattttaacataaaa 11942963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 33146109 - 33146065
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | |||||||||||| ||||    
T  33146109 gaggggagtgtatattttaacataagaggggaggggagtgcaatt 33146065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 34173713 - 34173757
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||| ||||||||||||||||| | |||||||||||||||||    
T  34173713 gaggggaatgtatattttaacataagaggggaggggagtgtaatt 34173757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 41521080 - 41521032
Alignment:
Q  25 gagaggggagtgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    ||||||| || |||||||||||||||| ||||||||||||| |||||||    
T  41521080 gagagggaagcgtatattttaacataagaagggaggggagtataattta 41521032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 4437979 - 4438022
Alignment:
Q  28 aggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||||| | ||||| |||||||||||    
T  4437979 aggggagtgtatattttaacataagaggggagaggagtgtaatt 4438022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 1534622 - 1534692
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||| ||||||||||||||||||||||||  |||||||||| | || |||| |  |||| |||||||||||    
T  1534622 tttcaaatatgttttgaataagaggagagatgagtgtatatatgaatataagagaggagaggagtgtaatt 1534692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 5113702 - 5113633
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||| |||||||||  ||  ||||||||| |||||||| || ||||||| ||||||||||    
T  5113702 tttctaatatgttttaaataagagggaagatgagtgtataatttaacat-aagagggaggtgagtgtaatt 5113633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 14743101 - 14743151
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    |||||||||||||||||||| |||| |||   |||||||||||||||||||    
T  14743101 tttctaatatgttttgaatacgaggggagtaaagtgtatattttaacataa 14743151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 59
Target Start/End: Complemental strand, 17449797 - 17449763
Alignment:
Q  25 gagaggggagtgtatattttaacataaaaagggag 59  Q
    ||||||||||||||||||||||||||| |||||||    
T  17449797 gagaggggagtgtatattttaacataagaagggag 17449763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 24758218 - 24758168
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    |||||||||||||||||||||||||  |||  ||| |||||||||||||||    
T  24758218 tttctaatatgttttgaataagagggaaggaaagtatatattttaacataa 24758168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 44332180 - 44332110
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||| |||||  ||||  ||||||||||| ||||||| | ||||||| || ||||||    
T  44332180 tttctaatatgttttgaaaaagagaggaggaaagtgtatatttaaacataagaggggagggaagggtaatt 44332110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 42791536 - 42791483
Alignment:
Q  18 ataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||| ||||||| ||||||||||||||||| | ||||| | |||||||||    
T  42791536 ataagaggggaggggattgtatattttaacataagaggggagagaagtgtaatt 42791483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 28167614 - 28167570
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||| |||||||||||||||||||| | || ||||||||||||||    
T  28167614 gaggagagtgtatattttaacataagagggaaggggagtgtaatt 28167570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 31597299 - 31597255
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||| ||||||||||||||| | |||||| ||||||||||    
T  31597299 gaggggagtttatattttaacataagaggggaggtgagtgtaatt 31597255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 40769369 - 40769413
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||| |||||||||||||||||||| | | |||||||||||||||    
T  40769369 gaggagagtgtatattttaacataagaggtgaggggagtgtaatt 40769413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 44332382 - 44332426
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | |||| | ||||||||||    
T  44332382 gaggggagtgtatattttaacataagaggggatgagagtgtaatt 44332426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 1e-24; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 5228613 - 5228682
Alignment:
Q  2 ttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  5228613 ttctaatatgttttgaataagaggggaggggagtgtatattttaacataaaaggggaggagagtgtaatt 5228682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 25357 - 25287
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| | |||||||||||||||||    
T  25357 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaatt 25287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 317379 - 317309
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| | |||||||||||||||||    
T  317379 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaatt 317309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 8535407 - 8535477
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||||||||||||| |||||||||||||||||    
T  8535407 tttctaatatgttttgaataagaggggagtggagtatatattttaacataaaaggggaggggagtgtaatt 8535477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 25607585 - 25607655
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| | |||||||||||||||||    
T  25607585 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaatt 25607655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 48982512 - 48982582
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||| |||||||||    
T  48982512 tttctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggagggaagtgtaatt 48982582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 27144277 - 27144210
Alignment:
Q  6 aatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||    
T  27144277 aataagttttgaataagaggggaggggagtgtatattttaacataagaggggaggggagtgtaattta 27144210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 1573178 - 1573109
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||| | |||||||||||||||||    
T  1573178 tttctaatatgttttgaataagaggggagggga-tgtatattttaacataagaggggaggggagtgtaatt 1573109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 2146137 - 2146067
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||| ||| | |||||||||||||||||    
T  2146137 tttctaatatgatttgaataagaggagaggagagtgtatattttaacttaagaggggaggggagtgtaatt 2146067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 34999282 - 34999216
Alignment:
Q  5 taatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||    
T  34999282 taatatgtgttgaataagaggggaggggagtgtatattttaacataagaggggaggggagtgtaatt 34999216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 19332474 - 19332397
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatttactcta 78  Q
    ||||||||||||||||||||||| | ||||  |||||||||||||||||||   ||||||||||||||||||||||||    
T  19332474 tttctaatatgttttgaataagatgggaggaaagtgtatattttaacataagtggggaggggagtgtaatttactcta 19332397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 36847933 - 36847872
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggagggg 62  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||    
T  36847933 tttctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggagggg 36847872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 11640953 - 11641025
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    ||||||||||||||||||||||||| |||   ||||||||| ||||||||||| |||||||||||||||||||    
T  11640953 tttctaatatgttttgaataagaggggagaaaagtgtatatattaacataaaaggggaggggagtgtaattta 11641025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 14078457 - 14078407
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14078457 tttctaatatgttttgaataagaggggaggggagtgtatattttaacataa 14078407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 14388485 - 14388435
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14388485 tttctaatatgttttgaataagaggggaggggagtgtatattttaacataa 14388435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 29823431 - 29823361
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||| ||| | |||||| ||||||||||    
T  29823431 tttctaatatattttgaataagaggggaggggagtgtatattttaacttaagaggggaggagagtgtaatt 29823361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 36687397 - 36687327
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||| | | ||||||||||||||||||||||| | ||||||| |||||||||    
T  36687397 tttctaatatgttttgaataagacggggggggagtgtatattttaacataagaggggagggaagtgtaatt 36687327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 38670657 - 38670727
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||| |||||| ||||| ||||||||||||||| ||| | |||||||||||||||||    
T  38670657 tttctaatatgttttgaaaaagaggggagggtagtgtatattttaacttaagaggggaggggagtgtaatt 38670727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 40401003 - 40400933
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||| | |||| | ||||||||||    
T  40401003 tttctaatatgttttgaataagaggggagaggagtgtatattttaacataagaggggatgagagtgtaatt 40400933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 42813552 - 42813622
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||  ||||||||||||||||||| |  ||||||||||||||||    
T  42813552 tttctaatatgttttgaataagaggggaggaaagtgtatattttaacataagagaggaggggagtgtaatt 42813622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 32867886 - 32867946
Alignment:
Q  11 gttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||| ||||||||||||||||||||||||| | ||||| |||||||||||    
T  32867886 gttttgaataagaggggaggggagtgtatattttaacataagaggggagaggagtgtaatt 32867946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 2935734 - 2935804
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||| ||||||||||||||||||| ||| | ||||||||||||||||||| | |||| ||||||||||||    
T  2935734 tttctcatatgttttgaataagaggggagagaagtgtatattttaacataagaggggaagggagtgtaatt 2935804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 6184752 - 6184683
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| | || ||||||| ||||||||||    
T  6184752 tttctaatatgttttgaataagagtggaggggagtgtatattttaac-ttaagagggaggagagtgtaatt 6184683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 8122728 - 8122678
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  8122728 tttctaatatgttttgaataagaggggagggaagtgtatattttaacataa 8122678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 20261097 - 20261035
Alignment:
Q  9 atgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||| ||||| ||||||||||||||||||| | ||||||| |||||||||    
T  20261097 atgttttgaataagaggggagggaagtgtatattttaacataagaggggagggaagtgtaatt 20261035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 22712277 - 22712347
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||| | ||||| ||||||||||||||||||| ||   ||||||||||||||    
T  22712277 tttctaatatgttttgaataagaagggagggtagtgtatattttaacataataaaaaaggggagtgtaatt 22712347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 32388121 - 32388191
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||| |||| | ||||| ||||||||||||||||||| | ||||| |||||||||||    
T  32388121 tttctaatatgttttgaaaaagatgggagggaagtgtatattttaacataagaggggagtggagtgtaatt 32388191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 38790714 - 38790784
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| |||||  ||||||||||||| |||| | | |||||||||||||||    
T  38790714 tttctaatatgttttgaataagaggggagggacgtgtatattttaatataagaggagaggggagtgtaatt 38790784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 40343859 - 40343789
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||  ||||||||||||||| ||||||||||||||||||||| ||| | || ||||||||||||||    
T  40343859 tttctaattagttttgaataagaggggaggggagtgtatattttaacttaagagggaaggggagtgtaatt 40343789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 46010552 - 46010502
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  46010552 tttctaatatgttttaaataagaggagagaggagtgtatattttaacataa 46010502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 31221455 - 31221499
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  31221455 gaggggagtgtatattttaacataagaagggaggggagtgtaatt 31221499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 40402177 - 40402221
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatatttta 45  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  40402177 tttctaatatgttttgaataagaggggaggggagtgtatatttta 40402221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 48872650 - 48872698
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacat 49  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  48872650 tttctaatatgttttgaataagaggggaggggtgtgtatattttaacat 48872698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 16425438 - 16425368
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||| ||||||||||||||||   ||||| ||||||||||||||||||| | ||||| |||||||||||    
T  16425438 tttctagtatgttttgaataagaatggagggaagtgtatattttaacataagaggggagaggagtgtaatt 16425368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 19156053 - 19156119
Alignment:
Q  5 taatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||| ||||||||| ||||| ||||||||||||||||||| | |||||  ||||||||||    
T  19156053 taatatgttttcaataagaggggagggaagtgtatattttaacataagaggggagatgagtgtaatt 19156119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 20755452 - 20755518
Alignment:
Q  5 taatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||| ||||||||| ||||| ||||||||||||||||||| | |||||  ||||||||||    
T  20755452 taatatgttttcaataagaggggagggaagtgtatattttaacataagaggggagatgagtgtaatt 20755518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 22263864 - 22263814
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||||||||    
T  22263864 tttctaatatattttgaataagaggggagggaagtgtatattttaacataa 22263814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 26903217 - 26903262
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaa 46  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||    
T  26903217 tttctaatatgttttgaataagaggggagggaagtgtatattttaa 26903262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 4518387 - 4518315
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    ||||||||||||||||  |||||||||||||  |||||||||||| ||||| | ||||||| || ||||||||    
T  4518387 tttctaatatgttttgcttaagaggagagggatgtgtatattttagcataagaggggagggtagcgtaattta 4518315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 62 - 184
Target Start/End: Original strand, 29736857 - 29736971
Alignment:
Q  62 gagtgtaatttactctattaa----attacagcttcatcactcatgtccagttgcccttttat--gtgtcaatatttatggagtaattaaaaaatacctt 155  Q
    |||||||||||||||||||||    |||||| |||||||||||||    ||||||||||||||  |||||||||||||           |||||||||||    
T  29736857 gagtgtaatttactctattaattaaattacaacttcatcactcat----agttgcccttttatatgtgtcaatatttac----------aaaaatacctt 29736942  T
Q  156 cagaaacaaacaaagagataccctaaaat 184  Q
    |||||||||||||||| ||||||||||||    
T  29736943 cagaaacaaacaaagaaataccctaaaat 29736971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 1573753 - 1573799
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    |||| |||||||||||||||||||| | |||||||||||||||||||    
T  1573753 gaggtgagtgtatattttaacataagaggggaggggagtgtaattta 1573799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 2790909 - 2790979
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||| |||| |||||||||||||| ||||| ||||||||||||||||||| |||  |  |||||||||||    
T  2790909 tttctcatatattttgaataagaggggagggaagtgtatattttaacataataagaaaaaggagtgtaatt 2790979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 12677174 - 12677128
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    ||||||||||||||||||||||||| | |||||| ||||||||||||    
T  12677174 gaggggagtgtatattttaacataagaggggaggagagtgtaattta 12677128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 13068406 - 13068452
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    ||||||||||||||||||||||||| || |||||| |||||||||||    
T  13068406 gaggggagtgtatattttaacataagaaaggagggaagtgtaattta 13068452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13904406 - 13904456
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||| ||| || || |||||||||||||||||||    
T  13904406 tttctaatatgttttgaataaaaggggatggaagtgtatattttaacataa 13904456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23742632 - 23742682
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||| |||  || |||||||||||||||||    
T  23742632 tttctaatatgttttgaataagaggggagatgattgtatattttaacataa 23742682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 30870552 - 30870622
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||| || |||||||||||||  ||||||||||||||||||||| ||| || ||||| | ||||||||    
T  30870552 tttctaaaatattttgaataagagaggaggggagtgtatattttaacctaagaaaggaggagcgtgtaatt 30870622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 31220895 - 31220829
Alignment:
Q  5 taatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||  ||||| | |||||||||||| |||| |||||||  ||||||||||    
T  31220895 taatatgttttgaataagagaggagggaattgtatattttaatataagaagggagaagagtgtaatt 31220829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 40401554 - 40401595
Alignment:
Q  30 gggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||| | |||||||||||||||||    
T  40401554 gggagtgtatattttaacataagaggggaggggagtgtaatt 40401595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 11639971 - 11639927
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||| |||||||||||||||||||| | |||||||||||||||||    
T  11639971 gaggagagtgtatattttaacataagaggggaggggagtgtaatt 11639927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 27619637 - 27619677
Alignment:
Q  31 ggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  27619637 ggagtgtatattttaacataagaggggaggggagtgtaatt 27619677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 33869291 - 33869224
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||| |||||||||||||   |||| ||||||||||||||||||||||||| | | |||| ||||||||||    
T  33869291 tttcgaatatgttttgaa---gaggggaggggagtgtatattttaacataagaggagaggagagtgtaatt 33869224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 29736767 - 29736815
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||  ||| ||||| |||||||||||||||||||    
T  29736767 tttctaatatgttttgaata--aggggagggaagtgtatattttaacataa 29736815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 32 - 71
Target Start/End: Complemental strand, 38790142 - 38790103
Alignment:
Q  32 gagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||| | |||||||||||||||||    
T  38790142 gagtgtatattttaacataagaggggaggggagtgtaatt 38790103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 39186869 - 39186932
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggag 64  Q
    ||||||||||||||||||||||||| ||||  ||||||| ||| ||||| |||  |||||||||    
T  39186869 tttctaatatgttttgaataagaggggaggaaagtgtatgtttgaacatgaaagaggaggggag 39186932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3340874 - 3340824
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    |||||||||| |||||||||||||| ||  | |||||||||||||||||||    
T  3340874 tttctaatatcttttgaataagaggggaatgaagtgtatattttaacataa 3340824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 11696845 - 11696883
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtat 39  Q
    ||||||||| ||||||||||||||| |||||||||||||    
T  11696845 tttctaataagttttgaataagaggggaggggagtgtat 11696883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12677716 - 12677766
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||| ||  | | |||||||||||||||||    
T  12677716 tttctaatatgttttgaataagaggggaaagcattgtatattttaacataa 12677766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12679611 - 12679661
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||| ||  | | |||||||||||||||||    
T  12679611 tttctaatatgttttgaataagaggggaaagcattgtatattttaacataa 12679661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 19435269 - 19435339
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||| |||||||||||||||| |||   |||||||||| |||||||| |  |||| |||||||||||    
T  19435269 tttctaatttgttttgaataagaggggagaaaagtgtatattataacataagagtggagaggagtgtaatt 19435339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 28308094 - 28308028
Alignment:
Q  5 taatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||| |||||| |||   ||| ||||||||||||||| | | |||||||||||||||    
T  28308094 taatatgttttgaaaaagaggggagaaaagtatatattttaacataagaggagaggggagtgtaatt 28308028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 29103622 - 29103572
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    |||| ||||| |||||||||||||  ||||| |||||||||||||||||||    
T  29103622 tttcaaatatattttgaataagagaggagggaagtgtatattttaacataa 29103572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 35783463 - 35783393
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||| ||| ||||| |||||||| ||  ||||||||||||||||||||| | | ||||| |||||||||    
T  35783463 tttctattatattttgcataagaggggaatggagtgtatattttaacataagaggagagggaagtgtaatt 35783393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 36688865 - 36688903
Alignment:
Q  33 agtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  36688865 agtgtatattttaacataagaggggaggggagtgtaatt 36688903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 38987829 - 38987783
Alignment:
Q  25 gagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||| ||||||||||||||||||||| | ||||||||||| |||||    
T  38987829 gagagtggagtgtatattttaacataagaggggaggggagtttaatt 38987783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 84
Target Start/End: Original strand, 2935824 - 2935853
Alignment:
Q  55 gggaggggagtgtaatttactctattaaat 84  Q
    ||||||||||||||||||||||||||||||    
T  2935824 gggaggggagtgtaatttactctattaaat 2935853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 13067858 - 13067821
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgta 38  Q
    ||||||||||||||||||||| ||| ||||||||||||    
T  13067858 tttctaatatgttttgaataataggggaggggagtgta 13067821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 2790155 - 2790111
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||| ||||||||||||| ||| | |||||||||||||||||    
T  2790155 gaggggaatgtatattttaacttaagaggggaggggagtgtaatt 2790111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 10412555 - 10412599
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||| ||||||||||||||||||| | |||||| ||||||||||    
T  10412555 gagggaagtgtatattttaacataagaggggaggagagtgtaatt 10412599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 19155976 - 19156008
Alignment:
Q  1 tttctaatatgttttgaataagaggagagggga 33  Q
    ||||||| |||||||||||||||||||||||||    
T  19155976 tttctaacatgttttgaataagaggagagggga 19156008  T

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Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 20261581 - 20261625
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | |||| | ||||||||||    
T  20261581 gaggggagtgtatattttaacataagaggggatgagagtgtaatt 20261625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 20755375 - 20755407
Alignment:
Q  1 tttctaatatgttttgaataagaggagagggga 33  Q
    ||||||| |||||||||||||||||||||||||    
T  20755375 tttctaacatgttttgaataagaggagagggga 20755407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 22711711 - 22711667
Alignment:
Q  25 gagaggggagtgtatattttaacataaaaagggaggggagtgtaa 69  Q
    ||||| ||||||||||||||||||||| | |||||| ||||||||    
T  22711711 gagagtggagtgtatattttaacataagaggggaggagagtgtaa 22711667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 29615591 - 29615547
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||| ||||||||||||||||| | |||||| ||||||||||    
T  29615591 gaggggaatgtatattttaacataagaggggaggagagtgtaatt 29615547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 29616191 - 29616243
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaa 53  Q
    ||||||||||| ||||||||||||| ||| ||| | |||||||||| ||||||    
T  29616191 tttctaatatgatttgaataagaggggagaggattatatattttaatataaaa 29616243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 32867315 - 32867275
Alignment:
Q  31 ggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||| | ||||||||| |||||||    
T  32867315 ggagtgtatattttaacataagaggggaggggaatgtaatt 32867275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 48872086 - 48872042
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| |  |||||||| |||||||    
T  48872086 gaggggagtgtatattttaacataagagaggaggggaatgtaatt 48872042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 19620 - 19690
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| | |||||||||||||||||    
T  19620 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggggagtgtaatt 19690  T

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Target: chr1 (Bit Score: 55; Significance: 8e-23; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 29510452 - 29510522
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| | || ||||||||||||||    
T  29510452 tttctaatatgttttgaataagaggggaggggagtgtatattttaacataagagggaaggggagtgtaatt 29510522  T

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Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 794721 - 794791
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||| | |||||| ||||||||||    
T  794721 tttctaatatgttttgaataagagaggaggggagtgtatattttaacataagaggggaggagagtgtaatt 794791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 1845960 - 1845890
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||| ||| | |||||||||||||||||    
T  1845960 tttctaatatgttttgaataagaggggaggggagtgtatgttttaacttaagaggggaggggagtgtaatt 1845890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 11916551 - 11916481
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||| |||||||||||||| ||||| ||||||||||||||||||| || ||||||||||||||||    
T  11916551 tttctaatatattttgaataagaggggagggaagtgtatattttaacataataaaggaggggagtgtaatt 11916481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 18407175 - 18407245
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||| | |||||| ||||||||||    
T  18407175 tttctaatatgttttgaataagaggggaggggaatgtatattttaacataagaggggaggagagtgtaatt 18407245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 23739790 - 23739860
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||| | ||||||| |||||||||    
T  23739790 tttctaatatgttttgaataagaggggaggagagtgtatattttaacataagaggggagggaagtgtaatt 23739860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 38011827 - 38011897
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| |  ||||||||||||||||    
T  38011827 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagagtggaggggagtgtaatt 38011897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 41321613 - 41321543
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| | |||||| ||||||||||    
T  41321613 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagaggggaggagagtgtaatt 41321543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 43320016 - 43319946
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||| ||||||| ||||||| ||||||||||||||||||| | |||||||||||||||    
T  43320016 tttctaatatgttttgattaagaggggaggggaatgtatattttaacataaaaggagaggggagtgtaatt 43319946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 51362464 - 51362530
Alignment:
Q  5 taatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||  |||||||||    
T  51362464 taatatgttttgaataagaggggaggggagtgtatattttaacataaaaggggaggaaagtgtaatt 51362530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 31765976 - 31766028
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaa 53  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  31765976 tttctaatatgttttgaataagaggggaggggagtgtatattttaacataaaa 31766028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 8061126 - 8061056
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||| |  ||||| ||||||||||    
T  8061126 tttctaatatgttttgaataagagggaaggggagtgtatattttaacataagagaggaggagagtgtaatt 8061056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 15357034 - 15356964
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||| |||||||||||||| ||||||| ||||||||||||||||| | ||||||| |||||||||    
T  15357034 tttctaatattttttgaataagaggggaggggattgtatattttaacataagaggggagggaagtgtaatt 15356964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 19072332 - 19072402
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||| |||||||||||||| |||||||||||||||||||| |||| |  ||||||||||||||||    
T  19072332 tttctaatatattttgaataagaggggaggggagtgtatattttaatataagagaggaggggagtgtaatt 19072402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 19120222 - 19120292
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||| |||||||||||||| |||||||||||||||||||| |||| |  ||||||||||||||||    
T  19120222 tttctaatatattttgaataagaggggaggggagtgtatattttaatataagagaggaggggagtgtaatt 19120292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 42830638 - 42830568
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||| | ||||||||||||||||| | ||| |||||||||||||    
T  42830638 tttctaatatgttttgaataagaggggagggaaatgtatattttaacataagaggggcggggagtgtaatt 42830568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 50144025 - 50144095
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||| | |||| | ||||||||||    
T  50144025 tttctaatatgttttgaataagaggggaggagagtgtatattttaacataagaggggatgagagtgtaatt 50144095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 47553237 - 47553169
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaa 69  Q
    |||||||||| |||||||||||||| ||||||| ||||||||||||||||| | |||||| ||||||||    
T  47553237 tttctaatatattttgaataagaggggaggggaatgtatattttaacataagaggggaggagagtgtaa 47553169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 9091111 - 9091060
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatttactcta 78  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  9091111 gaggggagtgtatattttaacataaaaggggaggggaatgtaatttactcta 9091060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 12048390 - 12048459
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||| ||||||||| || |||||||||||||| || ||||||||||||| |||||||    
T  12048390 tttctaatatgttttgaaaaagaggagatggaagtgtatattttaagat-aaaagggaggggaatgtaatt 12048459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 27226299 - 27226369
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||| |||||| ||||| | ||||||||||||||||| | | |||||||||||||||    
T  27226299 tttctaatatgttttgaaaaagaggggagggaaatgtatattttaacataagaggagaggggagtgtaatt 27226369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 27931279 - 27931349
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||| ||| |||||||||||||||| ||||| | ||||||||||||||||| | |||||||||||||||||    
T  27931279 tttcaaatttgttttgaataagaggggagggaattgtatattttaacataagaggggaggggagtgtaatt 27931349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 29344618 - 29344545
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatttactct 77  Q
    ||||||||||||||||||||||| |   ||| ||||||||||||||||||| | |||||| ||||||||||||||||    
T  29344618 tttctaatatgttttgaataagaag---gggaagtgtatattttaacataagaggggaggagagtgtaatttactct 29344545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 36605374 - 36605444
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||||||  |   |||||||||||||||||||| | |||||||||||||||||    
T  36605374 tttctaatatgttttgaataagagggaaaatgagtgtatattttaacataagaggggaggggagtgtaatt 36605444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 41575274 - 41575204
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||| |||||||||||||| |||||||||| |||||||||||||| | || || |||||||||||    
T  41575274 tttctaatatattttgaataagaggggaggggagtgcatattttaacataagagggaagaggagtgtaatt 41575204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 41575986 - 41576055
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||| |||||| ||||| |||||||||||||||||||||  |||||||| |||||||    
T  41575986 tttctaatatgttttgaa-aagaggggagggaagtgtatattttaacataaaagaggaggggaatgtaatt 41576055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 45195212 - 45195262
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  45195212 tttctaatatgttttgaataaaaggggaggggagtgtatattttaacataa 45195262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 47216828 - 47216898
Alignment:
Q  5 taatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatttact 75  Q
    |||||| |||||||||||||| ||||| | ||||||||||||||||| | ||||||| |||||||||||||    
T  47216828 taatatattttgaataagaggggagggaattgtatattttaacataagaggggagggaagtgtaatttact 47216898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 49129104 - 49129035
Alignment:
Q  2 ttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||| |||||||||||||||||  || ||||||||||||||||||||| |||||| | ||||||||||    
T  49129104 ttctaaaatgttttgaataagagggaagaggagtgtatattttaacataagaagggatgagagtgtaatt 49129035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19997704 - 19997632
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    ||||||||||||||||||||||||| |||   ||||||||||||||||||| | |||||| || |||||||||    
T  19997704 tttctaatatgttttgaataagaggggagaaaagtgtatattttaacataagaggggaggagaatgtaattta 19997632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 4666975 - 4666904
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtata-ttttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||| |||||||| ||||||||||| | |||||  ||||||||||    
T  4666975 tttctaatatgttttgaataagaggggagggaagtgtatatttttaacataagaggggagatgagtgtaatt 4666904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 6851899 - 6851829
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| || |||| |||| |||||||||||||| | ||||| ||| |||||    
T  6851899 tttctaatatgttttgaataagaggggatgggattgtagattttaacataaaatgagagggaagtttaatt 6851829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 7307059 - 7306989
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||| |||||| || || ||||||||||||||||||||| |||| | |||| |||||    
T  7307059 tttctaatatgttttgaaaaagaggggaaggaagtgtatattttaacataaaaggggatgagagtataatt 7306989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13574136 - 13574186
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||| ||||||| | |||||||||||||||||||    
T  13574136 tttctaatatgttttgaataataggagagagaagtgtatattttaacataa 13574186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 16537002 - 16537064
Alignment:
Q  9 atgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||| ||||  ||||||||||||||||||| | ||||||| |||||||||    
T  16537002 atgttttgaataagaggggaggaaagtgtatattttaacataagaggggagggaagtgtaatt 16537064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 17109991 - 17110060
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||| ||||||||| || | |||||||||||||||||||| | ||||||| |||||||||    
T  17109991 tttctaatatgttttaaataagagg-gaagagagtgtatattttaacataagaggggagggtagtgtaatt 17110060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 20585086 - 20585016
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||   || ||| ||||||||||||||||| ||||||||| | |||||||    
T  20585086 tttctaatatgttttgaataagagagaagaggattgtatattttaacataagaagggagggcattgtaatt 20585016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 47233688 - 47233738
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||| || |||| |||||||||||||||||    
T  47233688 tttctaatatgttttgaataagaggggaagggaatgtatattttaacataa 47233738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 52505394 - 52505324
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| |  ||||||||||||| |||| ||| | |||||||| ||||||||    
T  52505394 tttctaatatgttttgaataagagggggtgggagtgtatattctaacttaagaggggaggggggtgtaatt 52505324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 44645908 - 44645969
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggagggg 62  Q
    |||||||||| |||||||||||||| || | ||||||||||||||||||||||  |||||||    
T  44645908 tttctaatatattttgaataagaggggatgagagtgtatattttaacataaaataggagggg 44645969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 16536446 - 16536402
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | |||||||||||||||||    
T  16536446 gaggggagtgtatattttaacataagaggggaggggagtgtaatt 16536402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 47291669 - 47291601
Alignment:
Q  5 taatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    |||||| ||||||||||||||||||| |||| ||||||||||| ||||| |  ||| ||||||||||||    
T  47291669 taatatattttgaataagaggagaggtgagtatatattttaacttaaaaggaaaggagagtgtaattta 47291601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 41575842 - 41575893
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatttactcta 78  Q
    ||||| ||||||||||||||||||| | |||||| |||||||||||||||||    
T  41575842 gagggaagtgtatattttaacataagaggggaggagagtgtaatttactcta 41575893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 45559192 - 45559133
Alignment:
Q  12 ttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||| ||||| | ||||||||||||||||| | || ||||||||||||||    
T  45559192 ttttgaataagaggggagggaaatgtatattttaacataagatggaaggggagtgtaatt 45559133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 45738643 - 45738714
Alignment:
Q  5 taatatgttttgaataagaggagaggggag-----tgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||| ||||||||     ||||||||||||||||| | ||||| |||||||||||    
T  45738643 taatatgttttgaataagaggggaggggagggaagtgtatattttaacataagaggggagaggagtgtaatt 45738714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 47233133 - 47233090
Alignment:
Q  28 aggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  47233133 aggggaatgtatattttaacataagaagggaggggagtgtaatt 47233090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 125045 - 125095
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    |||||||||||||||| |||||||  ||| |||||||||||||||||||||    
T  125045 tttctaatatgttttgcataagagaggagaggagtgtatattttaacataa 125095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 25068980 - 25069026
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaac 47  Q
    ||||||||||||||||||||||| | ||||| |||||||||||||||    
T  25068980 tttctaatatgttttgaataagatgggagggaagtgtatattttaac 25069026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 27532555 - 27532601
Alignment:
Q  6 aatatgttttgaataagaggagagggga-gtgtatattttaacataa 51  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||    
T  27532555 aatatgttttgaataagaggggaggggacgtgtatattttaacataa 27532601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 46682775 - 46682725
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    |||||||||| |||||||||||||   ||||||||||||||||||||||||    
T  46682775 tttctaatatattttgaataagagagaaggggagtgtatattttaacataa 46682725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 1386620 - 1386657
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgta 38  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  1386620 tttctaatatgttttgaataagaggggaggggagtgta 1386657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 19611411 - 19611476
Alignment:
Q  13 tttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatttactcta 78  Q
    |||| |||||||| |||||| |||||||||||||| ||  | ||||||| ||||||||||||||||    
T  19611411 tttgcataagaggggaggggcgtgtatattttaacctatgaggggagggtagtgtaatttactcta 19611476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 42831201 - 42831245
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| |  ||||||||||||||||    
T  42831201 gaggggagtgtatattttaacataagagcggaggggagtgtaatt 42831245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 43320577 - 43320621
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||| ||| ||||||||||||||||| |||||||||||||||||    
T  43320577 gagggaagtctatattttaacataaaaggggaggggagtgtaatt 43320621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 44649264 - 44649339
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatttactct 77  Q
    |||||||||| |||||||||||||| || |  |||||||||||||| ||||||  | ||||| ||||||||||||||    
T  44649264 tttctaatatattttgaataagaggggatgaaagtgtatattttaatataaaatagaagggg-gtgtaatttactct 44649339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 45737379 - 45737335
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||| |||||||||||||||||||| | |||||||||||||||||    
T  45737379 gaggagagtgtatattttaacataagaggggaggggagtgtaatt 45737335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 45737949 - 45737993
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatatttta 45  Q
    |||||||||||||||||||||||||  | ||||||||||||||||    
T  45737949 tttctaatatgttttgaataagagggaaagggagtgtatatttta 45737993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 46111651 - 46111607
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatatttta 45  Q
    ||||||||||||||||||| ||||| || ||||||||||||||||    
T  46111651 tttctaatatgttttgaatcagaggggaagggagtgtatatttta 46111607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 50143459 - 50143415
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||| ||||||||||||||||| | |||||||||||||||||    
T  50143459 gaggggaatgtatattttaacataagaggggaggggagtgtaatt 50143415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 1116499 - 1116464
Alignment:
Q  36 gtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||| |||||||||||||||||    
T  1116499 gtatattttaacataaaaggggaggggagtgtaatt 1116464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 831907 - 831977
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||| |||||||||   || |||| |||||||||||||||||||| | |||||  ||||||||||    
T  831907 tttctaatatattttgaatattgggggaggagagtgtatattttaacataagaggggagatgagtgtaatt 831977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 1114888 - 1114926
Alignment:
Q  33 agtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  1114888 agtgtatattttaacataagaggggaggggagtgtaatt 1114926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 2275756 - 2275826
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||| || |||| ||||||||  |||| || ||||||||||||||||| |||  ||||||||||||||    
T  2275756 tttctaacatattttaaataagagcggaggagaatgtatattttaacataagaagaaaggggagtgtaatt 2275826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 28045118 - 28045188
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||| |||||| |||||||  |||| | ||||||||||||||||| | | ||||| |||||||||    
T  28045118 tttctaatatcttttgagtaagagggaagggaattgtatattttaacataagaggagagggtagtgtaatt 28045188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28971435 - 28971485
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||| ||||||||||||||  |||| | ||||||||||||||||||    
T  28971435 tttctaataagttttgaataagagaggaggagcgtgtatattttaacataa 28971485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 33126285 - 33126235
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    |||||||||||||||||| |||||| ||||| | | |||||||||||||||    
T  33126285 tttctaatatgttttgaaaaagaggggagggaattatatattttaacataa 33126235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 51611900 - 51611850
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||| ||||||||| ||||||||| ||||  |||||||||||||||||||    
T  51611900 tttctcatatgttttaaataagaggggaggaaagtgtatattttaacataa 51611850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 19071783 - 19071742
Alignment:
Q  30 gggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||| | |||||| ||||||||||    
T  19071783 gggagtgtatattttaacataagaggggaggagagtgtaatt 19071742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 19119673 - 19119632
Alignment:
Q  30 gggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||||||||| | |||||| ||||||||||    
T  19119673 gggagtgtatattttaacataagaggggaggagagtgtaatt 19119632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36511502 - 36511453
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacata 50  Q
    |||||||||||||||||| |||||| ||| | ||||||| ||||||||||    
T  36511502 tttctaatatgttttgaaaaagaggggagtgaagtgtatgttttaacata 36511453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 38294228 - 38294191
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgta 38  Q
    |||||||||||||||||||||||||||||  |||||||    
T  38294228 tttctaatatgttttgaataagaggagagtagagtgta 38294191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 9997998 - 9998042
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | ||||||| || ||||||    
T  9997998 gaggggagtgtatattttaacataagaggggagggaagggtaatt 9998042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 18406604 - 18406560
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||| ||||||||||||||||||| |  ||||||||||||||||    
T  18406604 gagggtagtgtatattttaacataagagaggaggggagtgtaatt 18406560  T

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Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 27225750 - 27225706
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||| ||||||||||||||||||| | |||||| ||||||||||    
T  27225750 gagggaagtgtatattttaacataagaggggaggagagtgtaatt 27225706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 45738074 - 45738030
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||| ||||||||||||||||||| | |||||| ||||||||||    
T  45738074 gagggaagtgtatattttaacataagaggggaggagagtgtaatt 45738030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 49129683 - 49129719
Alignment:
Q  35 tgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||| | |||||||||||||||||    
T  49129683 tgtatattttaacataagaggggaggggagtgtaatt 49129719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2113 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold2113
Description:

Target: scaffold2113; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 827 - 757
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| |  ||||||||||||||||    
T  827 tttctaatatgttttgaataagaggggaggggagtgtatattttaacttaagagtggaggggagtgtaatt 757  T

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Target: scaffold0289 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 3509 - 3439
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||| | ||||||||    
T  3509 tttctaatatgttttgaataagaggggaggggagtgtatattttaacataagaggggaggagtgtgtaatt 3439  T

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Target: scaffold0289; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 4053 - 4091
Alignment:
Q  33 agtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  4053 agtgtatattttaacataagatgggaggggagtgtaatt 4091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 48; Significance: 1e-18; HSPs: 3)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 16583 - 16516
Alignment:
Q  4 ctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||| |||||||||||||| ||| ||||||||||||||||||||| | |||||||||||||||||    
T  16583 ctaatatattttgaataagaggggagaggagtgtatattttaacataagatgggaggggagtgtaatt 16516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 80
Target Start/End: Complemental strand, 16504 - 16476
Alignment:
Q  52 aaagggaggggagtgtaatttactctatt 80  Q
    |||||||||||||||||||||||||||||    
T  16504 aaagggaggggagtgtaatttactctatt 16476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 17148 - 17192
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | |||| | ||||||||||    
T  17148 gaggggagtgtatattttaacataagaggggatgtgagtgtaatt 17192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1192 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold1192
Description:

Target: scaffold1192; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 261 - 191
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||||||| | ||||||||| |||||||    
T  261 tttctaatatgttttgaataagaggggtgggaagtgtatattttaacataagaggggaggggactgtaatt 191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1192; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 824 - 868
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||| ||||||||||||||||| | | |||||||||||||||    
T  824 gaggggaatgtatattttaacataagaggagaggggagtgtaatt 868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 10694 - 10624
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||| | ||||||||||||||||| | ||| |||||||||||||    
T  10694 tttctaatatgttttgaataagaggggagggaaatgtatattttaacataagaggggcggggagtgtaatt 10624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 11257 - 11301
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| |  ||||||||||||||||    
T  11257 gaggggagtgtatattttaacataagagcggaggggagtgtaatt 11301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 47; Significance: 5e-18; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 421903 - 421973
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| ||||| ||||||||||| ||||||| | |||| ||||||||||||    
T  421903 tttctaatatgttttgaataagaggggagggaagtgtatatttaaacataagaggggaagggagtgtaatt 421973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14150 - 14080
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||| ||||||||||||||||   ||||| ||||||||||||||||||| | ||||| |||||||||||    
T  14150 tttctagtatgttttgaataagaatggagggaagtgtatattttaacataagaggggagaggagtgtaatt 14080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 421222 - 421178
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | |||||||||||||||||    
T  421222 gaggggagtgtatattttaacataagaggggaggggagtgtaatt 421178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 2863 - 2935
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||| ||| |   ||| |||||||||||||    
T  2863 tttctaatatattttgaataagaggggaggggagtgtatattttaacttaagagatgagaggagtgtaattta 2935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 2298 - 2254
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||| |||||||||||| | |||||||||||||||||    
T  2298 gaggggagtgtaaattttaacataagaggggaggggagtgtaatt 2254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12833 - 12883
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    |||||||||||||||||||||||||  |||||| |||||||||||||||||    
T  12833 tttctaatatgttttgaataagagggaaggggaatgtatattttaacataa 12883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 15968 - 16018
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||||||| ||||| | |||||||||||||||||    
T  15968 tttctaatatgttttgaataagaggggagggaactgtatattttaacataa 16018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 5950 - 5888
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggagggga 63  Q
    ||||||||||||||||||||||||  || ||||||||||||||||| |||| | |||||||||    
T  5950 tttctaatatgttttgaataagagatgatgggagtgtatattttaagataagaggggagggga 5888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 31331 - 31397
Alignment:
Q  5 taatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||| || |||| | ||||||||||||||||||||||||||| ||||||  |||||||||    
T  31331 taatatgttttaaaaaagaagggaggggagtgtatattttaacataaaaggggaggaaagtgtaatt 31397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 32782 - 32745
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgta 38  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  32782 tttctaatatgttttgaataagaggggaggggagtgta 32745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 26976 - 27046
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||| |||||||||||||||||| ||| | ||||||||||||||||||| | |||||  ||||||||||    
T  26976 tttctattatgttttgaataagaggggagagaagtgtatattttaacataagaggggagatgagtgtaatt 27046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 11069 - 11019
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    ||||||||||||||||||||| ||| ||||||||||||| |||||||||||    
T  11069 tttctaatatgttttgaataataggggaggggagtgtatgttttaacataa 11019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 11627 - 11673
Alignment:
Q  25 gagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    |||||||||||||||| |||||||||| | |||||| ||||||||||    
T  11627 gagaggggagtgtataatttaacataagaggggaggtgagtgtaatt 11673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 37; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 351910 - 351982
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaattta 73  Q
    ||||||||||||||||||||||||| |||   ||||||||||||||||||| |  |||| ||| |||||||||    
T  351910 tttctaatatgttttgaataagaggggagaaaagtgtatattttaacataagagaggagaggaatgtaattta 351982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 7993 - 8044
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaa 52  Q
    |||||||||||||||| |||||||| |||| |||||||||| ||||||||||    
T  7993 tttctaatatgttttgcataagaggggaggtgagtgtatatattaacataaa 8044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 34304 - 34358
Alignment:
Q  17 aataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||| ||||||||||||||| ||| | |||||||||| ||||||    
T  34304 aataagaggagagggaagtgtatattttaacttaagaggggaggggagcgtaatt 34358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 3752 - 3683
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaat 70  Q
    ||||||||||||||||||||||||   || | | ||||||||||||||||||| ||||| | ||||||||    
T  3752 tttctaatatgttttgaataagagagaagagaaatgtatattttaacataaaaggggagagaagtgtaat 3683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 3772 - 3703
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataaaaagggaggggagtgtaat 70  Q
    ||||||||||||||||||||||||   || | | ||||||||||||||||||| ||||| | ||||||||    
T  3772 tttctaatatgttttgaataagagagaagagaaatgtatattttaacataaaaggggagagaagtgtaat 3703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 59335 - 59291
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | |||||| ||||||||||    
T  59335 gaggggagtgtatattttaacataagaggggaggagagtgtaatt 59291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 25857 - 25907
Alignment:
Q  1 tttctaatatgttttgaataagaggagaggggagtgtatattttaacataa 51  Q
    |||||||| | ||||||||||||||| ||  ||||||||||||||||||||    
T  25857 tttctaatgtattttgaataagaggatagaagagtgtatattttaacataa 25907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 11364 - 11320
Alignment:
Q  27 gaggggagtgtatattttaacataaaaagggaggggagtgtaatt 71  Q
    ||||||||||||||||||||||||| | ||||||  |||||||||    
T  11364 gaggggagtgtatattttaacataagaggggaggaaagtgtaatt 11320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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