View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17020_high_3 (Length: 411)

Name: NF17020_high_3
Description: NF17020
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17020_high_3
NF17020_high_3
[»] chr6 (46 HSPs)
chr6 (15-353)||(19704825-19705163)
chr6 (15-353)||(2629141-2629477)
chr6 (54-353)||(18317753-18318051)
chr6 (15-353)||(12195771-12196102)
chr6 (15-353)||(30034859-30035194)
chr6 (17-353)||(26932820-26933156)
chr6 (15-353)||(30966925-30967259)
chr6 (154-353)||(5275727-5275926)
chr6 (64-353)||(17011781-17012059)
chr6 (23-347)||(17852275-17852592)
chr6 (46-353)||(22858238-22858534)
chr6 (89-353)||(20526548-20526800)
chr6 (189-275)||(30445318-30445404)
chr6 (15-99)||(28241577-28241655)
chr6 (15-93)||(14459021-14459093)
chr6 (15-95)||(20915612-20915688)
chr6 (15-99)||(1230505-1230583)
chr6 (15-95)||(14507431-14507505)
chr6 (15-99)||(26064961-26065044)
chr6 (15-99)||(26084930-26085013)
chr6 (15-120)||(15532937-15533036)
chr6 (17-95)||(15541398-15541470)
chr6 (15-95)||(8995463-8995537)
chr6 (15-95)||(9019910-9019984)
chr6 (15-95)||(11983285-11983359)
chr6 (15-95)||(19227664-19227738)
chr6 (15-95)||(4816487-4816575)
chr6 (189-275)||(30443111-30443195)
chr6 (15-95)||(1072133-1072207)
chr6 (15-95)||(24338704-24338778)
chr6 (15-95)||(32447572-32447646)
chr6 (17-95)||(13057178-13057250)
chr6 (15-54)||(25477293-25477332)
chr6 (15-95)||(15530378-15530452)
chr6 (15-54)||(3390398-3390437)
chr6 (15-95)||(3632194-3632268)
chr6 (46-95)||(26066309-26066358)
chr6 (46-95)||(26068580-26068629)
chr6 (46-95)||(29754977-29755026)
chr6 (22-54)||(15719673-15719705)
chr6 (15-54)||(3630120-3630159)
chr6 (298-341)||(12158532-12158575)
chr6 (15-53)||(3233987-3234025)
chr6 (17-54)||(13039773-13039810)
chr6 (15-54)||(22490658-22490698)
chr6 (300-345)||(30443022-30443069)
[»] chr5 (68 HSPs)
chr5 (15-389)||(27912185-27912559)
chr5 (15-387)||(18468666-18469034)
chr5 (15-353)||(25803709-25804048)
chr5 (15-359)||(27910131-27910473)
chr5 (23-387)||(18509582-18509939)
chr5 (23-355)||(18511476-18511802)
chr5 (15-387)||(26098507-26098873)
chr5 (15-335)||(10586549-10586865)
chr5 (15-353)||(15551927-15552268)
chr5 (46-353)||(3373322-3373628)
chr5 (15-353)||(26097423-26097756)
chr5 (15-275)||(18466453-18466707)
chr5 (29-353)||(18596328-18596656)
chr5 (172-353)||(21288531-21288713)
chr5 (70-275)||(15143262-15143461)
chr5 (203-348)||(17415748-17415893)
chr5 (15-99)||(4410002-4410084)
chr5 (15-222)||(40221340-40221545)
chr5 (23-143)||(6661446-6661560)
chr5 (251-353)||(6661929-6662031)
chr5 (15-99)||(6747249-6747329)
chr5 (15-99)||(10529355-10529433)
chr5 (15-95)||(25921729-25921803)
chr5 (15-95)||(31542684-31542758)
chr5 (15-99)||(39854429-39854506)
chr5 (23-144)||(41585970-41586086)
chr5 (15-95)||(1189865-1189944)
chr5 (15-95)||(2818592-2818666)
chr5 (15-95)||(20507718-20507792)
chr5 (15-95)||(31545029-31545103)
chr5 (15-95)||(38882054-38882129)
chr5 (15-95)||(21684707-21684791)
chr5 (15-95)||(2174868-2174942)
chr5 (15-95)||(4236578-4236652)
chr5 (15-95)||(31179627-31179701)
chr5 (296-353)||(40221284-40221341)
chr5 (15-90)||(16776112-16776181)
chr5 (301-353)||(18466413-18466465)
chr5 (15-99)||(6745006-6745092)
chr5 (15-58)||(34477310-34477353)
chr5 (15-58)||(34479675-34479718)
chr5 (23-95)||(12556187-12556253)
chr5 (301-350)||(15143225-15143274)
chr5 (15-95)||(16092456-16092534)
chr5 (15-95)||(17072832-17072906)
chr5 (15-95)||(20042999-20043073)
chr5 (15-95)||(25904052-25904126)
chr5 (23-95)||(36402592-36402658)
chr5 (15-54)||(31472869-31472908)
chr5 (53-95)||(15354770-15354812)
chr5 (53-95)||(15357046-15357088)
chr5 (15-95)||(10474579-10474653)
chr5 (55-95)||(23665087-23665127)
chr5 (55-95)||(23667362-23667402)
chr5 (55-95)||(23793460-23793500)
chr5 (15-54)||(695873-695912)
chr5 (15-54)||(6756478-6756517)
chr5 (15-54)||(34530922-34530961)
chr5 (16-94)||(37706037-37706109)
chr5 (15-54)||(39398249-39398287)
chr5 (189-231)||(6661594-6661636)
chr5 (22-88)||(4897674-4897742)
chr5 (87-144)||(5778979-5779036)
chr5 (296-345)||(5779168-5779217)
chr5 (62-95)||(38960339-38960372)
chr5 (63-95)||(10757213-10757245)
chr5 (55-95)||(23742055-23742095)
chr5 (202-275)||(32520241-32520316)
[»] scaffold0511 (1 HSPs)
scaffold0511 (15-353)||(1737-2074)
[»] chr7 (78 HSPs)
chr7 (23-387)||(7092439-7092800)
chr7 (15-353)||(7094678-7095013)
chr7 (15-387)||(7349529-7349899)
chr7 (15-387)||(7470278-7470653)
chr7 (30-387)||(20299123-20299476)
chr7 (15-387)||(28487217-28487586)
chr7 (15-353)||(3035417-3035754)
chr7 (15-387)||(31156167-31156532)
chr7 (15-353)||(1849667-1850014)
chr7 (15-350)||(20625739-20626071)
chr7 (15-350)||(20629630-20629962)
chr7 (15-350)||(20642049-20642381)
chr7 (15-353)||(7472236-7472572)
chr7 (15-353)||(7351908-7352244)
chr7 (30-353)||(11756927-11757246)
chr7 (46-353)||(1606173-1606478)
chr7 (15-353)||(28485263-28485599)
chr7 (46-387)||(38395954-38396294)
chr7 (15-353)||(38393685-38394019)
chr7 (15-353)||(18345239-18345574)
chr7 (15-347)||(24258166-24258496)
chr7 (15-353)||(37412384-37412714)
chr7 (23-353)||(42331263-42331591)
chr7 (23-353)||(21989855-21990175)
chr7 (84-353)||(21470614-21470881)
chr7 (15-283)||(13099732-13099993)
chr7 (155-353)||(47865330-47865528)
chr7 (23-275)||(43253780-43254035)
chr7 (15-251)||(20297163-20297395)
chr7 (26-353)||(3676999-3677301)
chr7 (207-353)||(443328-443474)
chr7 (189-352)||(40281824-40281989)
chr7 (15-99)||(48457604-48457686)
chr7 (15-95)||(44523-44597)
chr7 (15-144)||(443504-443628)
chr7 (15-95)||(1049551-1049625)
chr7 (15-89)||(3878540-3878610)
chr7 (15-95)||(27306485-27306559)
chr7 (15-99)||(40946279-40946361)
chr7 (15-95)||(35588-35662)
chr7 (15-95)||(9680773-9680852)
chr7 (189-275)||(12310442-12310528)
chr7 (15-95)||(18567572-18567646)
chr7 (15-95)||(31435303-31435377)
chr7 (76-144)||(40281688-40281756)
chr7 (15-95)||(40836998-40837072)
chr7 (26-95)||(22392432-22392495)
chr7 (296-345)||(20297108-20297157)
chr7 (15-95)||(25542490-25542563)
chr7 (23-120)||(7188476-7188568)
chr7 (15-54)||(11355252-11355291)
chr7 (15-54)||(20137365-20137404)
chr7 (15-54)||(21678060-21678099)
chr7 (15-54)||(21680021-21680060)
chr7 (15-54)||(26804563-26804602)
chr7 (31-95)||(9679013-9679076)
chr7 (86-144)||(10691025-10691083)
chr7 (15-95)||(22251798-22251872)
chr7 (297-345)||(10690684-10690732)
chr7 (15-58)||(1047180-1047223)
chr7 (228-275)||(12484976-12485023)
chr7 (228-275)||(12506407-12506454)
chr7 (15-54)||(22828889-22828928)
chr7 (15-58)||(38396306-38396349)
chr7 (15-54)||(44724573-44724612)
chr7 (301-347)||(43254023-43254069)
chr7 (180-261)||(10690773-10690854)
chr7 (55-95)||(22108120-22108160)
chr7 (55-95)||(22137131-22137171)
chr7 (22-54)||(24465543-24465575)
chr7 (55-95)||(40549880-40549920)
chr7 (55-95)||(40552158-40552198)
chr7 (23-54)||(4296199-4296230)
chr7 (228-275)||(12657600-12657647)
chr7 (15-54)||(21592399-21592438)
chr7 (15-50)||(24748592-24748627)
chr7 (62-95)||(9027401-9027434)
chr7 (63-95)||(2935312-2935344)
[»] chr1 (85 HSPs)
chr1 (15-387)||(31735779-31736147)
chr1 (15-353)||(47905958-47906293)
chr1 (15-353)||(15295092-15295437)
chr1 (15-353)||(9463502-9463838)
chr1 (15-353)||(24325349-24325686)
chr1 (15-387)||(27337196-27337564)
chr1 (15-353)||(39931764-39932096)
chr1 (15-353)||(9459675-9460011)
chr1 (15-323)||(21948445-21948751)
chr1 (15-353)||(27339388-27339728)
chr1 (15-353)||(17324894-17325225)
chr1 (15-353)||(48664854-48665200)
chr1 (23-353)||(28998519-28998842)
chr1 (23-353)||(29004235-29004558)
chr1 (23-350)||(2949497-2949810)
chr1 (170-353)||(6115532-6115716)
chr1 (165-353)||(45693834-45694022)
chr1 (163-353)||(4131690-4131880)
chr1 (16-233)||(2510583-2510801)
chr1 (46-243)||(46432011-46432207)
chr1 (167-387)||(6997182-6997395)
chr1 (157-317)||(6996067-6996221)
chr1 (64-221)||(26520419-26520580)
chr1 (240-353)||(46432521-46432634)
chr1 (202-353)||(16561133-16561284)
chr1 (189-275)||(11693580-11693666)
chr1 (73-216)||(6115395-6115541)
chr1 (189-275)||(13785662-13785748)
chr1 (15-95)||(47177307-47177385)
chr1 (15-95)||(47179658-47179736)
chr1 (72-272)||(14352759-14352946)
chr1 (15-95)||(28842442-28842518)
chr1 (15-93)||(20302410-20302482)
chr1 (15-99)||(2617461-2617539)
chr1 (15-95)||(51749988-51750062)
chr1 (22-145)||(16561367-16561490)
chr1 (15-101)||(25127808-25127895)
chr1 (15-95)||(28840627-28840703)
chr1 (15-88)||(6822971-6823038)
chr1 (15-95)||(12302763-12302842)
chr1 (15-95)||(13215030-13215104)
chr1 (15-95)||(13761786-13761860)
chr1 (15-95)||(41646869-41646943)
chr1 (15-125)||(6995958-6996063)
chr1 (96-272)||(10115572-10115738)
chr1 (15-88)||(6823840-6823908)
chr1 (15-95)||(15823495-15823569)
chr1 (15-95)||(16231550-16231624)
chr1 (15-95)||(28207324-28207398)
chr1 (15-95)||(38925736-38925810)
chr1 (15-95)||(51752314-51752388)
chr1 (23-94)||(10400094-10400159)
chr1 (225-275)||(32260833-32260883)
chr1 (15-95)||(16226116-16226190)
chr1 (15-95)||(20291406-20291480)
chr1 (296-345)||(32260746-32260795)
chr1 (15-95)||(47451597-47451671)
chr1 (15-94)||(18307059-18307132)
chr1 (15-90)||(25248772-25248841)
chr1 (15-93)||(17186386-17186458)
chr1 (15-54)||(17318877-17318916)
chr1 (15-54)||(31423132-31423171)
chr1 (17-99)||(39462464-39462540)
chr1 (236-282)||(13112047-13112093)
chr1 (15-53)||(16428638-16428676)
chr1 (15-95)||(25251533-25251607)
chr1 (15-54)||(18839571-18839610)
chr1 (23-94)||(26613503-26613571)
chr1 (15-54)||(31425277-31425316)
chr1 (26-95)||(49495468-49495531)
chr1 (15-56)||(4131637-4131678)
chr1 (15-95)||(11457733-11457807)
chr1 (21-54)||(50079085-50079118)
chr1 (22-54)||(6115344-6115376)
chr1 (76-140)||(32260950-32261014)
chr1 (298-345)||(11693706-11693753)
chr1 (97-128)||(13785580-13785611)
chr1 (15-54)||(31489899-31489938)
chr1 (15-46)||(46431965-46431996)
chr1 (296-345)||(13785786-13785835)
chr1 (62-95)||(23783500-23783533)
chr1 (15-51)||(6756514-6756550)
chr1 (305-345)||(10115466-10115506)
chr1 (71-99)||(13449856-13449884)
chr1 (15-47)||(16432396-16432428)
[»] chr4 (88 HSPs)
chr4 (15-389)||(22132646-22133021)
chr4 (15-389)||(14787687-14788055)
chr4 (15-353)||(17662490-17662824)
chr4 (15-353)||(24347961-24348295)
chr4 (15-353)||(22134871-22135217)
chr4 (23-387)||(5100711-5101066)
chr4 (15-353)||(44600094-44600426)
chr4 (23-353)||(56030191-56030513)
chr4 (72-339)||(30136331-30136596)
chr4 (23-248)||(19322547-19322766)
chr4 (15-224)||(53405001-53405207)
chr4 (205-353)||(47211158-47211306)
chr4 (70-353)||(10112628-10112899)
chr4 (114-353)||(38890478-38890699)
chr4 (15-180)||(47210996-47211160)
chr4 (70-353)||(9022062-9022335)
chr4 (15-144)||(18709419-18709551)
chr4 (201-353)||(9863501-9863650)
chr4 (15-99)||(8631675-8631757)
chr4 (15-95)||(38409202-38409282)
chr4 (72-275)||(54928982-54929180)
chr4 (15-95)||(5637721-5637799)
chr4 (15-95)||(5198423-5198497)
chr4 (15-99)||(6764838-6764916)
chr4 (15-95)||(24888799-24888873)
chr4 (15-99)||(40637073-40637151)
chr4 (15-95)||(7941322-7941398)
chr4 (15-95)||(9148254-9148330)
chr4 (196-275)||(10979676-10979755)
chr4 (15-95)||(11006493-11006571)
chr4 (15-95)||(11434958-11435032)
chr4 (15-95)||(11008822-11008900)
chr4 (15-95)||(36919841-36919917)
chr4 (15-95)||(37089627-37089704)
chr4 (296-353)||(14789512-14789569)
chr4 (15-95)||(22044646-22044720)
chr4 (15-95)||(22802990-22803064)
chr4 (15-95)||(47274730-47274804)
chr4 (15-99)||(47868400-47868478)
chr4 (15-95)||(48486322-48486396)
chr4 (15-95)||(51015249-51015323)
chr4 (15-99)||(2485128-2485207)
chr4 (15-95)||(619703-619777)
chr4 (15-95)||(9174402-9174476)
chr4 (15-95)||(9176730-9176804)
chr4 (15-95)||(16934399-16934473)
chr4 (15-95)||(18847156-18847230)
chr4 (15-95)||(22046941-22047015)
chr4 (23-95)||(22801126-22801192)
chr4 (15-95)||(40091671-40091745)
chr4 (8-95)||(24446828-24446909)
chr4 (15-92)||(36921750-36921822)
chr4 (254-353)||(19322410-19322510)
chr4 (189-345)||(38209098-38209259)
chr4 (15-99)||(14633319-14633396)
chr4 (15-95)||(16932045-16932119)
chr4 (15-94)||(16453313-16453386)
chr4 (15-95)||(31849855-31849929)
chr4 (213-272)||(29609838-29609897)
chr4 (15-54)||(37313322-37313361)
chr4 (15-53)||(2891356-2891394)
chr4 (31-95)||(13543957-13544020)
chr4 (15-95)||(24878992-24879066)
chr4 (15-95)||(36378295-36378369)
chr4 (15-99)||(52942702-52942781)
chr4 (15-95)||(3824826-3824903)
chr4 (15-54)||(3937465-3937504)
chr4 (224-275)||(5516701-5516752)
chr4 (15-58)||(22780629-22780672)
chr4 (15-58)||(22782994-22783037)
chr4 (15-54)||(33415743-33415782)
chr4 (15-54)||(38928434-38928473)
chr4 (22-95)||(25357640-25357713)
chr4 (23-95)||(19095885-19095951)
chr4 (15-95)||(38270242-38270316)
chr4 (70-106)||(9863700-9863736)
chr4 (85-144)||(29609767-29609823)
chr4 (15-54)||(12396101-12396140)
chr4 (15-54)||(12401063-12401102)
chr4 (236-275)||(14647175-14647214)
chr4 (306-341)||(29609948-29609983)
chr4 (73-140)||(32274204-32274271)
chr4 (70-128)||(38208986-38209044)
chr4 (296-345)||(54929220-54929267)
chr4 (331-387)||(16455017-16455074)
chr4 (23-56)||(16455323-16455356)
chr4 (299-339)||(5516793-5516833)
chr4 (15-43)||(18409603-18409631)
[»] chr8 (48 HSPs)
chr8 (15-353)||(608472-608813)
chr8 (15-353)||(43529873-43530207)
chr8 (15-353)||(28283475-28283811)
chr8 (15-350)||(15808967-15809298)
chr8 (15-353)||(3873752-3874089)
chr8 (23-389)||(41384459-41384815)
chr8 (23-353)||(41382421-41382744)
chr8 (197-353)||(32339096-32339252)
chr8 (15-204)||(181434-181616)
chr8 (15-144)||(24873437-24873567)
chr8 (15-144)||(32339260-32339388)
chr8 (238-353)||(3265635-3265750)
chr8 (15-99)||(22684912-22685000)
chr8 (15-95)||(14807756-14807830)
chr8 (15-95)||(12517280-12517356)
chr8 (15-95)||(3886174-3886248)
chr8 (15-95)||(4424023-4424097)
chr8 (15-95)||(15072715-15072789)
chr8 (15-95)||(18810713-18810787)
chr8 (15-95)||(27826991-27827065)
chr8 (15-95)||(27829302-27829376)
chr8 (15-95)||(44720848-44720922)
chr8 (15-114)||(14419447-14419541)
chr8 (15-95)||(18812898-18812972)
chr8 (15-95)||(26775206-26775280)
chr8 (189-275)||(11701364-11701447)
chr8 (8-95)||(35872627-35872708)
chr8 (15-95)||(13858740-13858814)
chr8 (15-95)||(14477281-14477355)
chr8 (15-95)||(33541644-33541718)
chr8 (15-54)||(5622994-5623033)
chr8 (201-272)||(13986214-13986285)
chr8 (15-54)||(25952561-25952600)
chr8 (15-54)||(27107153-27107192)
chr8 (15-54)||(37214466-37214505)
chr8 (15-58)||(43082009-43082052)
chr8 (15-53)||(36865579-36865617)
chr8 (15-54)||(1225206-1225245)
chr8 (15-54)||(15068021-15068060)
chr8 (299-345)||(13986328-13986374)
chr8 (301-345)||(11701435-11701479)
chr8 (15-54)||(5372434-5372472)
chr8 (23-54)||(27911055-27911086)
chr8 (23-54)||(27957474-27957505)
chr8 (15-54)||(30480759-30480798)
chr8 (15-58)||(43079639-43079681)
chr8 (296-345)||(30679208-30679256)
chr8 (22-54)||(21480554-21480586)
[»] chr3 (83 HSPs)
chr3 (15-387)||(457918-458287)
chr3 (15-353)||(746424-746760)
chr3 (15-353)||(4104149-4104481)
chr3 (15-353)||(25533109-25533445)
chr3 (15-389)||(42991919-42992289)
chr3 (15-353)||(455575-455910)
chr3 (25-389)||(53915760-53916116)
chr3 (15-353)||(10621784-10622125)
chr3 (15-353)||(51943044-51943374)
chr3 (23-353)||(41848806-41849147)
chr3 (31-353)||(1313084-1313397)
chr3 (23-353)||(27635889-27636210)
chr3 (15-353)||(42989954-42990307)
chr3 (23-350)||(53917926-53918245)
chr3 (15-145)||(6561689-6561813)
chr3 (15-99)||(4308535-4308613)
chr3 (15-99)||(27101435-27101517)
chr3 (15-99)||(9604861-9604944)
chr3 (15-95)||(6063700-6063776)
chr3 (17-95)||(10084645-10084721)
chr3 (15-95)||(11170333-11170407)
chr3 (15-99)||(51727260-51727338)
chr3 (17-95)||(10191565-10191641)
chr3 (15-95)||(38889968-38890043)
chr3 (15-92)||(11163082-11163153)
chr3 (15-95)||(3859457-3859531)
chr3 (15-95)||(5522869-5522943)
chr3 (15-99)||(35918203-35918281)
chr3 (15-99)||(43226011-43226089)
chr3 (15-99)||(50493924-50494002)
chr3 (189-272)||(11066346-11066429)
chr3 (18-95)||(1321370-1321441)
chr3 (296-353)||(6561615-6561672)
chr3 (15-99)||(24979632-24979710)
chr3 (15-95)||(26720477-26720551)
chr3 (15-99)||(43228216-43228294)
chr3 (15-95)||(6066050-6066125)
chr3 (200-272)||(54287487-54287559)
chr3 (69-144)||(11072825-11072900)
chr3 (17-95)||(22114561-22114633)
chr3 (15-89)||(18099424-18099493)
chr3 (205-270)||(53974011-53974077)
chr3 (15-95)||(5191582-5191656)
chr3 (21-95)||(6719357-6719439)
chr3 (15-95)||(15780789-15780863)
chr3 (15-95)||(35777350-35777424)
chr3 (15-95)||(45882868-45882942)
chr3 (15-95)||(18097154-18097229)
chr3 (15-58)||(30005801-30005844)
chr3 (205-275)||(11072731-11072801)
chr3 (15-95)||(47149149-47149228)
chr3 (15-95)||(1626937-1627011)
chr3 (15-95)||(10958577-10958651)
chr3 (15-99)||(32219020-32219098)
chr3 (15-95)||(10956281-10956355)
chr3 (45-99)||(27101540-27101592)
chr3 (15-54)||(28102256-28102295)
chr3 (15-54)||(28137549-28137588)
chr3 (15-58)||(38210330-38210373)
chr3 (62-99)||(25690651-25690688)
chr3 (46-99)||(29956589-29956642)
chr3 (46-99)||(30005744-30005797)
chr3 (15-95)||(32264293-32264371)
chr3 (15-95)||(47701849-47701923)
chr3 (296-345)||(53974148-53974197)
chr3 (22-58)||(29956646-29956682)
chr3 (15-54)||(28100295-28100334)
chr3 (15-54)||(43423717-43423756)
chr3 (15-54)||(51675009-51675048)
chr3 (60-99)||(53896489-53896528)
chr3 (70-144)||(11066469-11066543)
chr3 (299-345)||(11072644-11072690)
chr3 (15-95)||(28761682-28761756)
chr3 (15-95)||(43421669-43421743)
chr3 (22-120)||(1618916-1619012)
chr3 (15-54)||(3314648-3314687)
chr3 (228-275)||(5535882-5535929)
chr3 (15-54)||(5927018-5927057)
chr3 (15-54)||(6231413-6231452)
chr3 (22-95)||(3306728-3306795)
chr3 (15-53)||(53468709-53468747)
chr3 (77-115)||(53973898-53973936)
chr3 (64-120)||(53597144-53597201)
[»] scaffold0005 (4 HSPs)
scaffold0005 (15-389)||(51675-52043)
scaffold0005 (296-353)||(50161-50218)
scaffold0005 (15-99)||(183896-183973)
scaffold0005 (236-275)||(170076-170115)
[»] chr2 (53 HSPs)
chr2 (15-387)||(35215842-35216216)
chr2 (15-353)||(23452493-23452827)
chr2 (15-353)||(42452451-42452782)
chr2 (15-353)||(35218219-35218563)
chr2 (15-353)||(42923765-42924092)
chr2 (70-353)||(27583631-27583905)
chr2 (189-345)||(28568584-28568740)
chr2 (79-275)||(15693669-15693858)
chr2 (15-99)||(5377685-5377767)
chr2 (225-353)||(27136367-27136503)
chr2 (15-95)||(24162468-24162542)
chr2 (260-348)||(34575608-34575696)
chr2 (189-274)||(7502638-7502723)
chr2 (15-95)||(13910300-13910374)
chr2 (15-95)||(19504601-19504675)
chr2 (15-95)||(40032314-40032388)
chr2 (204-275)||(39286971-39287042)
chr2 (22-99)||(45280248-45280319)
chr2 (15-95)||(27104724-27104798)
chr2 (15-95)||(42064440-42064514)
chr2 (15-95)||(21520949-21521025)
chr2 (196-275)||(41304806-41304884)
chr2 (15-100)||(19502267-19502346)
chr2 (154-250)||(34575528-34575617)
chr2 (197-275)||(41303457-41303535)
chr2 (15-95)||(6264401-6264475)
chr2 (77-144)||(41304696-41304763)
chr2 (15-95)||(22163203-22163277)
chr2 (15-95)||(22287592-22287666)
chr2 (15-95)||(22407665-22407739)
chr2 (296-345)||(28568346-28568395)
chr2 (15-95)||(31733021-31733095)
chr2 (15-55)||(38020161-38020201)
chr2 (15-54)||(19007600-19007639)
chr2 (15-95)||(43623824-43623898)
chr2 (15-54)||(28196597-28196636)
chr2 (299-345)||(15693583-15693629)
chr2 (22-95)||(37963190-37963257)
chr2 (70-140)||(41303341-41303411)
chr2 (21-54)||(17849077-17849110)
chr2 (22-54)||(22874102-22874134)
chr2 (15-54)||(11739816-11739855)
chr2 (15-54)||(34979835-34979874)
chr2 (15-54)||(38020103-38020142)
chr2 (73-144)||(7502762-7502835)
chr2 (22-95)||(18800565-18800632)
chr2 (296-345)||(41303573-41303623)
chr2 (46-95)||(20589586-20589635)
chr2 (62-95)||(36559072-36559105)
chr2 (62-95)||(36561349-36561382)
chr2 (46-95)||(40699235-40699284)
chr2 (21-58)||(45239238-45239275)
chr2 (62-95)||(45332389-45332422)
[»] scaffold0154 (1 HSPs)
scaffold0154 (23-353)||(11737-12059)
[»] scaffold0031 (1 HSPs)
scaffold0031 (15-353)||(78885-79217)
[»] scaffold0133 (2 HSPs)
scaffold0133 (207-360)||(4541-4694)
scaffold0133 (64-145)||(4722-4803)
[»] scaffold1674 (1 HSPs)
scaffold1674 (261-387)||(1-127)
[»] scaffold0468 (2 HSPs)
scaffold0468 (240-353)||(2070-2183)
scaffold0468 (23-212)||(1895-2080)
[»] scaffold0025 (2 HSPs)
scaffold0025 (15-92)||(69547-69622)
scaffold0025 (15-95)||(73279-73357)
[»] scaffold0038 (1 HSPs)
scaffold0038 (15-99)||(41739-41817)
[»] scaffold0552 (1 HSPs)
scaffold0552 (15-99)||(1087-1165)
[»] scaffold0250 (1 HSPs)
scaffold0250 (15-95)||(2838-2912)
[»] scaffold0472 (1 HSPs)
scaffold0472 (15-95)||(6157-6231)
[»] scaffold0339 (1 HSPs)
scaffold0339 (15-95)||(3955-4029)
[»] scaffold0131 (2 HSPs)
scaffold0131 (15-95)||(14977-15051)
scaffold0131 (15-88)||(14638-14707)
[»] scaffold0068 (1 HSPs)
scaffold0068 (15-95)||(29119-29203)
[»] scaffold0267 (1 HSPs)
scaffold0267 (15-86)||(1-73)
[»] scaffold0008 (2 HSPs)
scaffold0008 (202-272)||(57836-57905)
scaffold0008 (72-145)||(57740-57813)
[»] scaffold0004 (1 HSPs)
scaffold0004 (15-54)||(79852-79891)
[»] scaffold0533 (1 HSPs)
scaffold0533 (204-251)||(1971-2018)
[»] scaffold0474 (1 HSPs)
scaffold0474 (296-345)||(10443-10492)
[»] scaffold0140 (2 HSPs)
scaffold0140 (62-95)||(22168-22201)
scaffold0140 (62-95)||(24443-24476)
[»] scaffold0011 (1 HSPs)
scaffold0011 (357-389)||(35547-35579)


Alignment Details
Target: chr6 (Bit Score: 282; Significance: 1e-158; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 15 - 353
Target Start/End: Original strand, 19704825 - 19705163
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaatataactcataaatt 114  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19704825 tgttgcctttctaaacccttgtttcagccccctccatctctctctcaaagtttgctctgatacaaggtctatatttatagtgaaatataactcataaatt 19704924  T
Q  115 tggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgc 214  Q
    |||||||||||||||||| ||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19704925 tggaacgaatatcacacttaagatacgtttcttttttttctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgc 19705024  T
Q  215 atcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaa 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||    
T  19705025 atcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgaaacaaatcttttatatttttagcaa 19705124  T
Q  315 caatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19705125 caatattcttcttccatcaaattttgagtcatactacaa 19705163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 15 - 353
Target Start/End: Original strand, 2629141 - 2629477
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||    |||||||||||||||||||||||| ||| ||||||| ||||||    
T  2629141 tgttgcctttctaaacccttgtttcagcccc-tctatctctctctcaaagtttaacatgatacaaggtctatatttatagtaaaagtataactaataaat 2629239  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| ||||  |||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2629240 ttggaacaaatactacactgaagatacgttt--ttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 2629337  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  2629338 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 2629437  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2629438 acaatattcttcttccatcaaattttgagtcatactacaa 2629477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 54 - 353
Target Start/End: Complemental strand, 18318051 - 18317753
Alignment:
Q  54 ctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnn 152  Q
    ||||| ||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||            
T  18318051 ctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtataactcataaatttggaacgaataccacactgaagatacgttt--tttttt 18317954  T
Q  153 nctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttat 252  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18317953 tctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcttccttcatacgatacaaaaatatatttat 18317854  T
Q  253 tgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactaca 352  Q
    ||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18317853 tgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccttcaaattttgagtcatactaca 18317754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 15 - 353
Target Start/End: Original strand, 12195771 - 12196102
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    |||||| |||||||||||||||||||||||||||||||||      |||||||||| |||||||||||||||||||||||| ||| ||||||||||||||    
T  12195771 tgttgcttttctaaacccttgtttcagccccctctatctc------aaagtttgctttgatacaaggtctatatttatagtaaaagtataactcataaat 12195864  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| |||||||||||| |||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12195865 ttggaacaaataccacactgaagattcgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 12195962  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||       ||||||||||||||||||    
T  12195963 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagca 12196062  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||| | |||||||| ||||||||||||||||||    
T  12196063 acaatattctccatccatcaatttttgagtcatactacaa 12196102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 15 - 353
Target Start/End: Original strand, 30034859 - 30035194
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    |||||||||||||||||||||||| ||| ||||||||||||||   |||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  30034859 tgttgcctttctaaacccttgttttagctccctctatctctctt--aaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 30034956  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| ||||||||| |||||||||||||         |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  30034957 ttggaacaaatatcacattgaagatacgttt--ttattttctccttcagtgaaagaatatctgcatcaaaaatataatattccctttcaaaatatatttg 30035054  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||       ||||||||||||||||||    
T  30035055 cattaaatcgttcttcatacgatacaaaaatatatttattgtctataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagca 30035154  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  30035155 acaatattctccatccatcaaattttgagtcatactacaa 30035194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 17 - 353
Target Start/End: Original strand, 26932820 - 26933156
Alignment:
Q  17 ttgcctttctaaacccttgtttcagccccctctatctctctcgc--aaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    |||| ||||||| ||||||||||| ||||||||||||||||| |  |||||||||| ||| |||||||||||||||||||||||| |||||| |||||||    
T  26932820 ttgcttttctaagcccttgtttcaaccccctctatctctctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaat 26932919  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| |||||||||||| |||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26932920 ttggaacaaataccacactgaagattcgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 26933016  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||| ||||       ||||||||||||||||||    
T  26933017 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataataatattttcagcacaatatatatttgaaacaaatcttttatatttttagca 26933116  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||| | |||||||| ||||||||||||||||||    
T  26933117 acaatattctccatccatcaatttttgagtcatactacaa 26933156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 15 - 353
Target Start/End: Complemental strand, 30967259 - 30966925
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  |||||||   || |||||||||||||||||||||| ||| ||||||||||||||    
T  30967259 tgttgtctttctaaacccttgtttcagccccctctatctctctc--aaagtttagcct-atacaaggtctatatttatagtaaaagtataactcataaat 30967163  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| |||||||||||| |||||         |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  30967162 ttggaacaaataccacactgaagattcgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattcgctttcaaaatatatttg 30967065  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  30967064 cattaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaataaatcttttatatttttagca 30966965  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||| | |||||||||||| ||||||||||||||    
T  30966964 acaatattctccatccatcaaatttggagtcatactacaa 30966925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 154 - 353
Target Start/End: Original strand, 5275727 - 5275926
Alignment:
Q  154 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttatt 253  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5275727 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt 5275826  T
Q  254 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  5275827 gtccataaatatattttcagcacaaaatatatttgaaataaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 5275926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 64 - 353
Target Start/End: Complemental strand, 17012059 - 17011781
Alignment:
Q  64 gtttgctctgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagt 163  Q
    |||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||          |  ||||||    
T  17012059 gtttactccgatacaaggtctatatttatagagaaatataactcataaatttggaacgaacatcactctgaagatacgttttt--------tttttcagt 17011968  T
Q  164 gaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaat 263  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  17011967 gaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccatcatacggtacaaaaatatatttattgtccataaat 17011868  T
Q  264 atattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    ||||||||  |||||||||   ||         |||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||    
T  17011867 atattttctacacaaaata---tttaaaacaaacttttatatttttagcaataatattcttcatccatcaaattttaagtcatactacaa 17011781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 23 - 347
Target Start/End: Complemental strand, 17852592 - 17852275
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacg 121  Q
    ||||||||||||||||||||||||||||||||      || |||| ||||||| ||| ||||||||||||||| ||| ||||||||||||||||||||||    
T  17852592 ttctaaacccttgtttcagccccctctatctc------aaggtttactctgattcaaagtctatatttatagtaaaagtataactcataaatttggaacg 17852499  T
Q  122 aatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 221  Q
    |||| ||||| |||||||| |||         ||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17852498 aataccacac-gaagatacttttttttttcttctctttcagtgaaataatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 17852400  T
Q  222 cgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca--acaata 319  Q
     || ||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||  ||||       ||||||||||||||||||  ||||||    
T  17852399 agttcttcataaggtacaaaaatatatttattgtccataaatatattttcagcataaaata--tttgaaacaaatcttttatatttttagcaacacaata 17852302  T
Q  320 ttcttcttccatcaaattttgagtcata 347  Q
    |||| | | |||||||||||||||||||    
T  17852301 ttctccat-catcaaattttgagtcata 17852275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 46 - 353
Target Start/End: Original strand, 22858238 - 22858534
Alignment:
Q  46 ctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgtttc 145  Q
    ||||||||||||| ||||  ||  ||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||  ||||||||||||||    
T  22858238 ctctatctctctcacaaa--ttcatctgatacaaggtttatatttatagagaaatataactcataaatttggaacgtatatcacgttgaagatacgtttc 22858335  T
Q  146 nnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaata 245  Q
            |||||||| ||||||||||||||||| ||||        ||||||||||||||||||||||||| |||| || |||||||| ||||||||||    
T  22858336 ttttttt-ctccttcaatgaaagaatatttgcatcaaaa--------ttccctttcaaaatatatttgcatctaatcttctttcatacggtacaaaaata 22858426  T
Q  246 tatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 345  Q
    |||||||||||||||||||||||||||||||||| ||| |||        |||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  22858427 tatttattgtccataaatatattttcagcacaaagtatatttaaaacaaatcttttatatttttattaacaatattcttcatccatcaaattttgagtca 22858526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 89 - 353
Target Start/End: Complemental strand, 20526800 - 20526548
Alignment:
Q  89 ttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatat 188  Q
    |||||| |||||||||||  |||||||||||||||||||||| ||||||| ||||||        || |  ||| ||||||||| |||||| |||         
T  20526800 ttatagagaaatataacttgtaaatttggaacgaatatcacattgaagatgcgtttctttttttccttcc-cagggaaagaatacttgcatcaaa----- 20526707  T
Q  189 aatattccctttcaaaa-tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatcttt 287  Q
      ||||| ||||||||| ||||||||||||||||| ||||||||||| ||||||||||||| ||     ||||||||||||||||||| ||||||| |||    
T  20526706 --tattctctttcaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatgta-----cataaatatattttcagcataaaatatattt 20526614  T
Q  288 gnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |       ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  20526613 gaaacaaatcttttatatttttagcaacaatattcttcacccatcaaattttgagtcatactacaa 20526548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 189 - 275
Target Start/End: Complemental strand, 30445404 - 30445318
Alignment:
Q  189 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 275  Q
    |||||||| ||| ||||||||||||||||||||| ||||||||| | |||||||||||||||||||| |||||||||||||||||||    
T  30445404 aatattcctttttaaaatatatttgcatcaaatcttccttcatatggtacaaaaatatatttattgttcataaatatattttcagca 30445318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 28241577 - 28241655
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||||    
T  28241577 tgttgcctttctaaacccttgtttcagccccctctatctct------aagtttgctctgatacaaggtctatatttatagtgaaa 28241655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 14459021 - 14459093
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttata 93  Q
    |||||||||||||||||||| ||||||||||||||||||      ||||||||||||||||||||||||||||||||||    
T  14459021 tgttgcctttctaaacccttatttcagccccctctatct------caaagtttgctctgatacaaggtctatatttata 14459093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 20915612 - 20915688
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||   || || || |||||||||||||||||||||||||    
T  20915612 tgttgcctttctaaacccttgtttcagccccctctatctctctc---aatttagc-ctgatacaaggtctatatttatagt 20915688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 1230505 - 1230583
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    |||||||||||||||||||||||||| ||| |||||||||      |||||||||| ||||||||||||||||||||||||||||    
T  1230505 tgttgcctttctaaacccttgtttcaaccctctctatctc------aaagtttgctatgatacaaggtctatatttatagtgaaa 1230583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 14507431 - 14507505
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||| ||||||||||||||      ||||||||||||| ||||||||||||||||||||||    
T  14507431 tgttgcctttctaaacccttgttttagccccctctatct------caaagtttgctctaatacaaggtctatatttatagt 14507505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 26065044 - 26064961
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||    | || ||||||||||||||||||||||||||||    
T  26065044 tgttgccattctaaacccttgtttcagccccctctatctctctc-caagaaatactgtgatacaaggtctatatttatagtgaaa 26064961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 26085013 - 26084930
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||    | || ||||||||||||||||||||||||||||    
T  26085013 tgttgccattctaaacccttgtttcagccccctctatctctctc-caagaaatactgtgatacaaggtctatatttatagtgaaa 26084930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 15532937 - 15533036
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    |||| ||||||||||||||||||||||||||||||||||      ||||||||  |||||||||||||||||||||||||| ||| ||||||| | ||||    
T  15532937 tgttacctttctaaacccttgtttcagccccctctatct------caaagtttagtctgatacaaggtctatatttatagtaaaagtataactta-aaat 15533029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 15541398 - 15541470
Alignment:
Q  17 ttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||      ||||||||  ||||||||||||||||||||||||||    
T  15541398 ttgcctttctaaacccttgtttcagccccctctatct------caaagtttagtctgatacaaggtctatatttatagt 15541470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 8995537 - 8995463
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||| |||||||||||||||||      ||||| |||||||||||| ||||||||||||||    
T  8995537 tgttgcctttctaaacccttgttttagccccctctatctctc------agtttactctgatacaagatctatatttatagt 8995463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 9019984 - 9019910
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||| |||||||||||||||||      ||||| |||||||||||| ||||||||||||||    
T  9019984 tgttgcctttctaaacccttgttttagccccctctatctctc------agtttactctgatacaagatctatatttatagt 9019910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 11983285 - 11983359
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||| || ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  11983285 tgttgcctttctaagcctttgtttcagccccctctatctcc------aagtttgctctgatacaaggtctatatttatagt 11983359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 19227664 - 19227738
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||| |||||||| |||||      ||||||||||||||||||||| ||||||||||||||    
T  19227664 tgttgcctttctaaacccttgtttgagccccctttatct------caaagtttgctctgatacaagatctatatttatagt 19227738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 4816487 - 4816575
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc--------aaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||||||| |        |||||||   |||||||||||||||||||||||||    
T  4816487 tgttgcctttctaaacccttgtttcagccccctctatctctctctctctctctcaaagtttagcctgatacaaggtctatatttatagt 4816575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 189 - 275
Target Start/End: Complemental strand, 30443195 - 30443111
Alignment:
Q  189 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 275  Q
    |||||| | ||| |||||| |||||||||||||| ||||| ||||| |||||| |||||||  ||||||||||||||||||||||||    
T  30443195 aatatttcttttaaaaatacatttgcatcaaatcttcctttatacggtacaaacatatatt--ttgtccataaatatattttcagca 30443111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 1072133 - 1072207
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||| || |||||||      |||||||| ||||||||||| |||||||||||||||    
T  1072133 tgttgcctttctaaacccttgtttcagctccttctatct------caaagtttactctgatacaatgtctatatttatagt 1072207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 24338704 - 24338778
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      ||| |||| | ||||||||| |||||||||||||||    
T  24338704 tgttgcctttctaaacccttgtttcagccccctctatct------caaggtttacactgatacaatgtctatatttatagt 24338778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 32447572 - 32447646
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      ||| |||| ||||||||||| | |||||||||||||    
T  32447572 tgttgcctttctaaacccttgtttcagccccctctatct------caaggtttactctgatacaaagcctatatttatagt 32447646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 13057250 - 13057178
Alignment:
Q  17 ttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||      ||| |||| | ||||||||| |||||||||||||||    
T  13057250 ttgcctttctaaacccttgtttcagccccctctatct------caaggtttacactgatacaatgtctatatttatagt 13057178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 25477332 - 25477293
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25477332 tgttgcctttctaaacccttgtttcagccccctctatctc 25477293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 15530378 - 15530452
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||| |||||| |||||| |||||||||||||||||| |      ||||| |||||||||||||||||||||||||||    
T  15530378 tgttgccattctaagcccttgcttcagccccctctatctccc------agtttactctgatacaaggtctatatttatagt 15530452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 3390437 - 3390398
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  3390437 tgttgcctttctaaacccttgtttcagccccgtctatctc 3390398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 3632194 - 3632268
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||| | ||||||||||      ||| |||| | ||||||||| |||||||||||||||    
T  3632194 tgttgcctttctaaacccttgtttcaactccctctatct------caaggtttacactgatacaatgtctatatttatagt 3632268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 95
Target Start/End: Original strand, 26066309 - 26066358
Alignment:
Q  46 ctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||  || ||||||||||| ||||||||||||||||||||||||    
T  26066309 ctctatctcaatctcaaagtttgctttgatacaaggtctatatttatagt 26066358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 95
Target Start/End: Original strand, 26068580 - 26068629
Alignment:
Q  46 ctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||  || ||||||||||| ||||||||||||||||||||||||    
T  26068580 ctctatctcaatctcaaagtttgctttgatacaaggtctatatttatagt 26068629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 95
Target Start/End: Original strand, 29754977 - 29755026
Alignment:
Q  46 ctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||| |||||||| || |||||||| ||||||||||||||||||||||||    
T  29754977 ctctctctctctctcagagtttgctttgatacaaggtctatatttatagt 29755026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 15719705 - 15719673
Alignment:
Q  22 tttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||||||||||||||||||    
T  15719705 tttctaaacccttgtttcagccccctctatctc 15719673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 3630120 - 3630159
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  3630120 tgttgcctttctaaaccgatgtttcagccccctctatctc 3630159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 12158575 - 12158532
Alignment:
Q  298 ttttatatttttagcaacaatattcttcttccatcaaattttga 341  Q
    ||||||||||||||||||||| |||||| | |||||||||||||    
T  12158575 ttttatatttttagcaacaatcttcttcattcatcaaattttga 12158532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 3233987 - 3234025
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatct 53  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  3233987 tgttgtctttctaaatccttgtttcagccccctctatct 3234025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 13039810 - 13039773
Alignment:
Q  17 ttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  13039810 ttgcctttctaaacccttgtttcagcctcctatatctc 13039773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 22490698 - 22490658
Alignment:
Q  15 tgttgcctttctaaa-cccttgtttcagccccctctatctc 54  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  22490698 tgttgcctttcaaaaacccttgtttcagccccctctatctc 22490658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 345
Target Start/End: Complemental strand, 30443069 - 30443022
Alignment:
Q  300 ttatatttttagcaacaatattcttcttccatc--aaattttgagtca 345  Q
    ||||||||||| |||||||||||||| ||||||  |||||||||||||    
T  30443069 ttatatttttaacaacaatattcttcatccatcataaattttgagtca 30443022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 251; Significance: 1e-139; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 15 - 389
Target Start/End: Complemental strand, 27912559 - 27912185
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  27912559 tgttgcctttctaaacccttgtttcagcaccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 27912460  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||||||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27912459 ttggaacaaatatcacactgaagatacgttt-ttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 27912361  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  27912360 catcaaatcgtttttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 27912261  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatgtc 389  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||    
T  27912260 acaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattagtgatgatgtc 27912185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 15 - 387
Target Start/End: Complemental strand, 18469034 - 18468666
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||    |||||||||||||||||||||||| ||| ||||||||||||||    
T  18469034 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttatcatgatacaaggtctatatttatagtaaaagtataactcataaat 18468937  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| |||||||||||||| |||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18468936 ttggaacaaataccacactgaagatactttt---tattttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 18468840  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  18468839 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 18468740  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatg 387  Q
    | |||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  18468739 aaaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattagtgatgatg 18468666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 15 - 353
Target Start/End: Complemental strand, 25804048 - 25803709
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc----aaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcat 109  Q
    ||||||| |||||||||||||||| ||||||||||||||||||| |    ||| || || ||||||||||||||||||||||||| ||| ||||||||||    
T  25804048 tgttgccattctaaacccttgtttgagccccctctatctctctctctctcaaatttagc-ctgatacaaggtctatatttatagtaaaagtataactcat 25803950  T
Q  110 aaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatata 209  Q
    ||||||||||| ||||| |||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25803949 aaatttggaacaaatattacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatata 25803853  T
Q  210 tttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattttt 309  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||    
T  25803852 tttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttt 25803753  T
Q  310 agcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||||||| | |||||||||||||||||||||||||||    
T  25803752 agcaacaatattctccatccatcaaattttgagtcatactacaa 25803709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 15 - 359
Target Start/End: Complemental strand, 27910473 - 27910131
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    |||||||||| |||||| |||||||||||||| ||||||||||| ||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  27910473 tgttgcctttttaaacc-ttgtttcagcccccgctatctctctctcaaagtttaacctgatacaaggtctatatttatagtaaaagtataactcataaat 27910375  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| |||||||||||||| |||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27910374 ttggaacaaataccacactgaagatactttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 27910277  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  27910276 catcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 27910177  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaaaattct 359  Q
    | |||||||| | ||||||||||||||||||||||||||| |||||    
T  27910176 ataatattctccatccatcaaattttgagtcatactacaacattct 27910131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 23 - 387
Target Start/End: Original strand, 18509582 - 18509939
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaa-atataactcataaatttggaacg 121  Q
    ||||||||||||||||||||||| ||||||||||    |||||||  |||||||||||||||||||||||||| || ||||||||||||||||||| | |    
T  18509582 ttctaaacccttgtttcagcccc-tctatctctc----aaagtttagtctgatacaaggtctatatttatagtaaacatataactcataaatttgggatg 18509676  T
Q  122 aatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 221  Q
    |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18509677 aataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 18509773  T
Q  222 cgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatatt 321  Q
    | | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |       ||||||||||||||||||||||||||    
T  18509774 cattcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatattcgaaataaatcttttatatttttagcaacaatatt 18509873  T
Q  322 cttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatg 387  Q
    || | ||||||||||||||||||||||||||  |||||| |||||||||  |||||||||||||||    
T  18509874 ctccatccatcaaattttgagtcatactacaccattctccaccttgactttaaattagtgatgatg 18509939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 23 - 355
Target Start/End: Original strand, 18511476 - 18511802
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaa-atataactcataaatttggaacg 121  Q
    ||||||||||||||||||||||||||||||||||    |||||||  |||||||||||||||||||||||| | || |||||||||||||||||||||||    
T  18511476 ttctaaacccttgtttcagccccctctatctctc----aaagtttagtctgatacaaggtctatatttatattaaacatataactcataaatttggaacg 18511571  T
Q  122 aatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 221  Q
    |||| |||||| |||||||||||         |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  18511572 aataccacactaaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatatttcctttcaaaatatatttgcatcaaat 18511668  T
Q  222 cgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatatt 321  Q
    ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |       ||||||||||||||||||||||||||    
T  18511669 cgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatattcgaaacaaatcttttatatttttagcaacaatatt 18511768  T
Q  322 cttcttccatcaaattttgagtcatactacaaaa 355  Q
    |||| |||||||||||||||||||||||||||||    
T  18511769 cttcatccatcaaattttgagtcatactacaaaa 18511802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 15 - 387
Target Start/End: Original strand, 26098507 - 26098873
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||| |||||||||||| |||||||||||||||||||       | |||| ||||||| ||||||||||||||||||| ||| |||||||||||||     
T  26098507 tgttgccattctaaacccttatttcagccccctctatctcc------aggtttactctgattcaaggtctatatttatagtaaaagtataactcataaaa 26098600  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    |||||||||||| |||| |||||||||||||         |||||||| ||||||||| |||| || |||||||||||||||||||||||||||||||||    
T  26098601 ttggaacgaataccacattgaagatacgttt-ttttatttctccttcaatgaaagaatttttgtatcaaaaatataatattccctttcaaaatatatttg 26098699  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  26098700 catcaaatcgttctttatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 26098799  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatg 387  Q
    | |||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  26098800 ataatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattagtgatgatg 26098873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 15 - 335
Target Start/End: Complemental strand, 10586865 - 10586549
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||  |||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  10586865 tgttgccattctaaacccttgtttcagcccc-tctatctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 10586769  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10586768 ttggaacaaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 10586671  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  10586670 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 10586571  T
Q  314 acaatattcttcttccatcaaa 335  Q
    |||||||||  | |||||||||    
T  10586570 acaatattccccatccatcaaa 10586549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 15 - 353
Target Start/End: Complemental strand, 15552268 - 15551927
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc----aaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcat 109  Q
    |||||| |||||||||||||||||||| |||||||||||||||| |    |||||||   ||||||||||||||||||||||||| ||| ||||||||||    
T  15552268 tgttgcttttctaaacccttgtttcagtcccctctatctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcat 15552169  T
Q  110 aaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatata 209  Q
    ||||||||||| |||| ||| ||||||||||||||         |||||||||||||||||||||||||| |||||| | ||||||||||||||||||||    
T  15552168 aaatttggaacaaataccacgctgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatgtcatattccctttcaaaatata 15552071  T
Q  210 tttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattttt 309  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||       ||||||||||||||    
T  15552070 tttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatcttcagcacaatatatatttgaaacaaatcttttatattttt 15551971  T
Q  310 agcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||||||| | |||||||||||||||||||||||||||    
T  15551970 agcaacaatattctccatccatcaaattttgagtcatactacaa 15551927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 46 - 353
Target Start/End: Original strand, 3373322 - 3373628
Alignment:
Q  46 ctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacgaatatcacactgaagatacgttt 144  Q
    |||||||||  || ||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| ||||||||||||||||||    
T  3373322 ctctatctcaatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgttt 3373421  T
Q  145 cnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaat 244  Q
             |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3373422 --tttttttctccttcagtgaaaaaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaat 3373519  T
Q  245 atatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtc 344  Q
    |||||||||||||||||||||||||||||||||| |||| ||||       |||||||||||||||||||||||||||| | ||||||||||| ||||||    
T  3373520 atatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattctgagtc 3373619  T
Q  345 atactacaa 353  Q
    |||||||||    
T  3373620 atactacaa 3373628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 15 - 353
Target Start/End: Complemental strand, 26097756 - 26097423
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||| ||||||||| || |||||||||||||||||||      ||||||| ||||||| ||||||||||||||||||| ||| ||||||||||||||    
T  26097756 tgttgccattctaaacctttatttcagccccctctatctc------aaagtttactctgattcaaggtctatatttatagtaaaagtataactcataaat 26097663  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctt--tcaaaatatatt 211  Q
    |||||||||||| |||||||||||||| |||         |||||||||||||||||||||||||| |||||||||| ||| ||||  ||||||||||||    
T  26097662 ttggaacgaataccacactgaagatacattt--ttttttcctccttcagtgaaagaatatttgcatcaaaaatataacatttccttcttcaaaatatatt 26097565  T
Q  212 tgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttag 311  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||       | ||||||||||||||    
T  26097564 tgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagtacaaaatatatttgaaacaaattttttatatttttag 26097465  T
Q  312 caacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||||| | |||||||||||||||||||||||||||    
T  26097464 caacaatattctccatccatcaaattttgagtcatactacaa 26097423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 15 - 275
Target Start/End: Complemental strand, 18466707 - 18466453
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  18466707 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaaatataactcataaat 18466610  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| |||||||||||||| |||         |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18466609 ttggaacaaataccacactgaagatactttt-----ttttctcctttagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 18466515  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 275  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18466514 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatttttagca 18466453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 29 - 353
Target Start/End: Complemental strand, 18596656 - 18596328
Alignment:
Q  29 acccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacgaatatc 127  Q
    |||||||||||||||||||||||| |      || |||| ||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| |    
T  18596656 acccttgtttcagccccctctatccc------aaggtttactctgattcaaggtctatatttatagtaaaagtataactcataaatttggaacgaatacc 18596563  T
Q  128 acactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtcct 227  Q
    |||||||||||||||||         |||||||||||| |||||||||| || ||||||||||||||| |||||||||||||||||||||||||||| ||    
T  18596562 acactgaagatacgttt--tttttttctccttcagtgatagaatatttgtatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttct 18596465  T
Q  228 tcatacgatacaaaaatatat-----------ttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaaca 316  Q
    | ||||| |||||||||||||           |||||||||||||||||||||||| |||||||||| ||||       |||||||||||||||||||||    
T  18596464 ttatacggtacaaaaatatatttatggtatatttattgtccataaatatattttcaacacaaaatatatttgaaacaaatcttttatatttttagcaaca 18596365  T
Q  317 atattcttcttccatcaaattttgagtcatactacaa 353  Q
    ||||||| | ||||||||||||||||||||| |||||    
T  18596364 atattctccatccatcaaattttgagtcatagtacaa 18596328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 172 - 353
Target Start/End: Complemental strand, 21288713 - 21288531
Alignment:
Q  172 atttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgata-caaaaatatatttattgtccataaatatatttt 270  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || | |||||||||||||||||||||||||||||||    
T  21288713 atttgcatcaaaaatataatattccctttcaaaatatatttgcataaaatcgttcttcatacggtaccgaaaatatatttattgtccataaatatatttt 21288614  T
Q  271 cagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    ||||||||||||| |||        |||||| ||||||||||||||||||||| | ||||||||||||||||| |||||||||    
T  21288613 cagcacaaaatatattttaaacaaatcttttttatttttagcaacaatattctccatccatcaaattttgagttatactacaa 21288531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 70 - 275
Target Start/End: Complemental strand, 15143461 - 15143262
Alignment:
Q  70 tctgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnc-tccttcagtgaaag 168  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| |||||||||||||||        | | ||||||||||||    
T  15143461 tctgatacaaggtctatatttatagagaaatataactcataaatttgtaacggatatcacgctgaagatacgtttcttttttccccttcttcagtgaaag 15143362  T
Q  169 aatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatatt 268  Q
    ||||||||||| |||       |||||||||||||||||||||||||||||||| ||||||||| | ||||||||| |||||||||||||||||||||||    
T  15143361 aatatttgcatcaaa-------tattccctttcaaaatatatttgcatcaaatcttccttcatatggtacaaaaatgtatttattgtccataaatatatt 15143269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 203 - 348
Target Start/End: Original strand, 17415748 - 17415893
Alignment:
Q  203 aaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntctttta 302  Q
    |||||||||||||||||||  ||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||    
T  17415748 aaatatatttgcatcaaattttccttcatacagtacaaaaatatatttattgtccataaatatattttcagcaaaaaatatatttgaaacaaatctttta 17415847  T
Q  303 tatttttagcaacaatattcttcttccatcaaattttgagtcatac 348  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  17415848 tatttttagcaacaatattcttcatccatcaaattttgagtcatac 17415893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 4410084 - 4410002
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  4410084 tgttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttgctctgatacaaggtctatatttatagtgaaa 4410002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 15 - 222
Target Start/End: Complemental strand, 40221545 - 40221340
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaatataactcataaatt 114  Q
    ||||||| ||||||||||||||||||||||||||||||||      || |||| ||||||  ||| ||||||||||||||| |||  |||||||||||||    
T  40221545 tgttgccattctaaacccttgtttcagccccctctatctc------aaggtttactctgagtcaatgtctatatttatagtaaaag-taactcataaatt 40221453  T
Q  115 tggaacgaatatcacactgaagatacgtttcnnnnnnnn-----ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatata 209  Q
    | ||||| ||||||||||||||||||||||              ||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  40221452 tagaacggatatcacactgaagatacgttttttgttttttccttctcctgcagtgaaagaatatttgcatcaaaaatataatattccttttcaaaatata 40221353  T
Q  210 tttgcatcaaatc 222  Q
    |||| | ||||||    
T  40221352 tttgaaacaaatc 40221340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 23 - 143
Target Start/End: Original strand, 6661446 - 6661560
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaatataactcataaatttggaacga 122  Q
    |||||||||||||||||| ||| |||||||||      || |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||     
T  6661446 ttctaaacccttgtttcaaccctctctatctc------aaggtttactctgatacaaggtctatatttatagtgaaatataactcataaatttgaaacgg 6661539  T
Q  123 atatcacactgaagatacgtt 143  Q
    |||| ||||||||||| ||||    
T  6661540 atataacactgaagatgcgtt 6661560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 251 - 353
Target Start/End: Original strand, 6661929 - 6662031
Alignment:
Q  251 attgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatacta 350  Q
    |||||||||||||||||||||| |||||||||| ||||       | |||||||||||||||||||||||||||| |||||||| |||| ||||||||||    
T  6661929 attgtccataaatatattttcaacacaaaatatatttgaaacaaatattttatatttttagcaacaatattcttcatccatcaagttttaagtcatacta 6662028  T
Q  351 caa 353  Q
    |||    
T  6662029 caa 6662031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 6747329 - 6747249
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    |||||| |||||||||||||||||||||||||||||||||| || |    |||||||||||||||||||||||||||||||||||    
T  6747329 tgttgcttttctaaacccttgtttcagccccctctatctctttctc----tttgctctgatacaaggtctatatttatagtgaaa 6747249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 10529355 - 10529433
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    |||||||||||||||||||||||||| ||| |||||||||      |||||||||||||||||||||||||||||||||||||||    
T  10529355 tgttgcctttctaaacccttgtttcaacccactctatctc------aaagtttgctctgatacaaggtctatatttatagtgaaa 10529433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 25921729 - 25921803
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||| |||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||    
T  25921729 tgttgtctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatttatagt 25921803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 31542758 - 31542684
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||| ||||||||||||||||||||||||    
T  31542758 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctttgatacaaggtctatatttatagt 31542684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 39854506 - 39854429
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    ||||||||||||||||||||||||||||||| ||||||||      |||||||||||||||||||||||||||||||||||||||    
T  39854506 tgttgcctttctaaacccttgtttcagcccc-tctatctc------aaagtttgctctgatacaaggtctatatttatagtgaaa 39854429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 23 - 144
Target Start/End: Original strand, 41585970 - 41586086
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacg 121  Q
    ||||||||||||||||||||||||| ||||||      || |||| |||||||||||   ||||||||||||| ||| ||||||||||| ||||||||||    
T  41585970 ttctaaacccttgtttcagccccctttatctc------aaggtttactctgatacaaaacctatatttatagtaaaagtataactcatagatttggaacg 41586063  T
Q  122 aatatcacactgaagatacgttt 144  Q
    |||| || |||||||||||||||    
T  41586064 aataccagactgaagatacgttt 41586086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 1189865 - 1189944
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgc-tctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||| ||||||||||||||||||||||||||  ||| |||| | ||||||||||||||||||||||||||    
T  1189865 tgttgcctttctaaactcttgtttcagccccctctatctctct--caaggtttacatctgatacaaggtctatatttatagt 1189944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 2818592 - 2818666
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||| ||||||||||||||||||||||||||||||||||      |||||||| |||||||||||||||||||||||||||    
T  2818592 tgttacctttctaaacccttgtttcagccccctctatct------caaagtttactctgatacaaggtctatatttatagt 2818666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 20507718 - 20507792
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      |||||||| |||||||||||| ||||||||||||||    
T  20507718 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttactctgatacaagatctatatttatagt 20507792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 31545103 - 31545029
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||||||||||||||||||||||||||| |||||      ||||||||||| ||||||||||||||||||||||||    
T  31545103 tgttgcctttctaaacccttgtttcagccccctttatct------caaagtttgctttgatacaaggtctatatttatagt 31545029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 38882129 - 38882054
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||||||||||||||||||||||||||     |||| || | ||||||||||||||||||||||||||||||||||    
T  38882129 tgttgcctttctaaacccttgtttcagccccc-----ctctatctccaagtttgctctgatacaaggtctatatttatagt 38882054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 21684707 - 21684791
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc----aaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |    |||||||   |||||||||||||||||||||||||    
T  21684707 tgttgcctttttaaacccttgtttcagccccctctatctctctctctctcaaagtttagcctgatacaaggtctatatttatagt 21684791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 2174942 - 2174868
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      | |||||||||||||||||||| || ||||||||||    
T  2174942 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggcctgtatttatagt 2174868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 4236652 - 4236578
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||| |||||||||||||||| ||||||       ||||||||||||||||||||||||||||||||||    
T  4236652 tgttgcctttctaaactcttgtttcagccccctttatctcc------aagtttgctctgatacaaggtctatatttatagt 4236578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 31179627 - 31179701
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||| ||||||||||      ||||||||||| |||||||| |||||||||||||||    
T  31179627 tgttgcctttctaaacccttgtttcagctccctctatct------caaagtttgctttgatacaatgtctatatttatagt 31179701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 296 - 353
Target Start/End: Complemental strand, 40221341 - 40221284
Alignment:
Q  296 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||||||||||||||||||||||| || || |||||||||||||||||||||    
T  40221341 tcttttatatttttagcaacaatattcttcatcaattaaattttgagtcatactacaa 40221284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 16776181 - 16776112
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattt 90  Q
    |||||||||| ||||||||||||||||||||||||||||      |||||||||||| ||||||||||||||||||    
T  16776181 tgttgcctttgtaaacccttgtttcagccccctctatct------caaagtttgctcagatacaaggtctatattt 16776112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 353
Target Start/End: Complemental strand, 18466465 - 18466413
Alignment:
Q  301 tatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  18466465 tatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 18466413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 6745092 - 6745006
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagt--ttgctctgatacaaggtctatatttatagtgaaa 99  Q
    |||||| ||||||||| |||||||||||||||| |||||||||| |    |  ||||||||||||||||||||||||||||||||||    
T  6745092 tgttgcttttctaaacacttgtttcagccccctttatctctctctctctctctttgctctgatacaaggtctatatttatagtgaaa 6745006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 34477310 - 34477353
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctc 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  34477310 tgttgcctttctaaacccttgtttcagccccctctatctctctc 34477353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 34479675 - 34479718
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctc 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  34479675 tgttgcctttctaaacccttgtttcagccccctctatctctctc 34479718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 12556187 - 12556253
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||| |||||||||||||||||||      ||||||| |||||||||||||||||||||||||||    
T  12556187 ttctaaacccttatttcagccccctctatctc------aaagtttactctgatacaaggtctatatttatagt 12556253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 301 - 350
Target Start/End: Complemental strand, 15143274 - 15143225
Alignment:
Q  301 tatatttttagcaacaatattcttcttccatcaaattttgagtcatacta 350  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  15143274 tatatttttagcaacaatattctccatccatcaaattttgagtcatacta 15143225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 16092456 - 16092534
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgc-tctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||| ||||||||||||||| |   |||||| | |||||||||| |||||||||| ||||    
T  16092456 tgttgcctttctaaacccttgtttcaaccccctctatctctcac---aagtttacatctgatacaaagtctatatttctagt 16092534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 17072906 - 17072832
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||| |||||||||||||||||||||||||||||||||      ||| |||| | ||||||||| |||||||||||||||    
T  17072906 tgttgtctttctaaacccttgtttcagccccctctatct------caaggtttacactgatacaatgtctatatttatagt 17072832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 20043073 - 20042999
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||| ||||||||||||||||||||||      ||| ||||||| |||||||| | |||||||||||||    
T  20043073 tgttgcctttctaaacacttgtttcagccccctctatct------caaggtttgctatgatacaaagcctatatttatagt 20042999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 25904126 - 25904052
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||| |||||||||||||||||||||||||||||||||      ||| |||| | ||||||||| |||||||||||||||    
T  25904126 tgttgtctttctaaacccttgtttcagccccctctatct------caaggtttacactgatacaatgtctatatttatagt 25904052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 36402592 - 36402658
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||      ||| |||| |||||||| ||||||||||||||||||    
T  36402592 ttctaaacccttgtttcagccccctctatct------caacgtttactctgatataaggtctatatttatagt 36402658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 31472869 - 31472908
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  31472869 tgttgcctttctaaacccttgttttagccccctctatctc 31472908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 15354770 - 15354812
Alignment:
Q  53 tctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||| ||||||||||| ||||||||||||||||||||||||    
T  15354770 tctctcccaaagtttgctttgatacaaggtctatatttatagt 15354812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 15357046 - 15357088
Alignment:
Q  53 tctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||| ||||||||||| ||||||||||||||||||||||||    
T  15357046 tctctcccaaagtttgctttgatacaaggtctatatttatagt 15357088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 10474579 - 10474653
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||||||||| ||||||||||||||||||||| |      ||| |||| | ||||||||| |||||||||||||||    
T  10474579 tgttgcctttctaaatccttgtttcagccccctctattt------caaggtttacactgatacaatgtctatatttatagt 10474653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 95
Target Start/End: Complemental strand, 23665127 - 23665087
Alignment:
Q  55 tctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  23665127 tctctcaaagtttgctttgatacaaggtctatatttatagt 23665087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 95
Target Start/End: Complemental strand, 23667402 - 23667362
Alignment:
Q  55 tctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  23667402 tctctcaaagtttgctttgatacaaggtctatatttatagt 23667362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 95
Target Start/End: Original strand, 23793460 - 23793500
Alignment:
Q  55 tctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  23793460 tctctcaaagtttgctttgatacaaggtctatatttatagt 23793500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 695912 - 695873
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  695912 tgttgcctttctaaacccttgtttcatccccctttatctc 695873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 6756517 - 6756478
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  6756517 tgttgcctttctaaaccattgtttcagctccctctatctc 6756478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 34530922 - 34530961
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  34530922 tgttgcatttctaaacacttgtttcagccccctctatctc 34530961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 37706037 - 37706109
Alignment:
Q  16 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatag 94  Q
    |||||||||||||||| || ||||||||||||||||||      ||| |||| | ||||||||| ||||||||||||||    
T  37706037 gttgcctttctaaacctttatttcagccccctctatct------caaggtttacactgatacaatgtctatatttatag 37706109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 39398249 - 39398287
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  39398249 tgttgcctttctaaacccttgtttcag-cccctctatctc 39398287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 231
Target Start/End: Original strand, 6661594 - 6661636
Alignment:
Q  189 aatattccctttcaaaatatatttgcatcaaatcgtccttcat 231  Q
    |||||||||||||||||||||||| | ||||||| ||||||||    
T  6661594 aatattccctttcaaaatatatttacttcaaatcttccttcat 6661636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 4897742 - 4897674
Alignment:
Q  22 tttctaaacccttgtttcag--ccccctctatctctctcgcaaagtttgctctgatacaaggtctatat 88  Q
    ||||||||||||||||||||  | | |||| |||||||| ||| |||| ||||||| ||||||||||||    
T  4897742 tttctaaacccttgtttcagctctctctctctctctctctcaaggtttactctgatgcaaggtctatat 4897674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 5778979 - 5779036
Alignment:
Q  87 atttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgttt 144  Q
    |||||||| ||||||||| ||||||||||  |||| |||||||  |||||||||||||    
T  5778979 atttatagagaaatataattcataaatttaaaacggatatcacgttgaagatacgttt 5779036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 345
Target Start/End: Original strand, 5779168 - 5779217
Alignment:
Q  296 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 345  Q
    ||||||||||||||||||| ||| |||||| || |||||||||| |||||    
T  5779168 tcttttatatttttagcaataatcttcttcatctatcaaattttaagtca 5779217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 95
Target Start/End: Original strand, 38960339 - 38960372
Alignment:
Q  62 aagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||| ||||||||||||||||||||||||    
T  38960339 aagtttgctttgatacaaggtctatatttatagt 38960372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 63 - 95
Target Start/End: Complemental strand, 10757245 - 10757213
Alignment:
Q  63 agtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||| ||||||||||||||||||||||||    
T  10757245 agtttgctttgatacaaggtctatatttatagt 10757213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 95
Target Start/End: Original strand, 23742055 - 23742095
Alignment:
Q  55 tctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||| ||||||||||| ||| ||||||||||||||||||||    
T  23742055 tctctcaaagtttgctttgacacaaggtctatatttatagt 23742095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 202 - 275
Target Start/End: Complemental strand, 32520316 - 32520241
Alignment:
Q  202 aaaatatatttgcatcaaatcgtccttcatacgatacaaaaatata--tttattgtccataaatatattttcagca 275  Q
    ||||||| ||||||||||||  | |||| |||| ||||||||||||  |||| | | |||||||||||||||||||    
T  32520316 aaaatatgtttgcatcaaatttttcttcgtacggtacaaaaatatatttttactctacataaatatattttcagca 32520241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 15 - 353
Target Start/End: Complemental strand, 2074 - 1737
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||| ||| |||||||||||||||||||||||| ||||||| ||||||    
T  2074 tgttgcctttctaaacccttgtttcagccccctatatctttctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtataacttataaat 1975  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    |||||||||||| ||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1974 ttggaacgaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 1877  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  1876 catcaaatcttccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 1777  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  1776 acaatattcttcttccttcaaattttgagtcatactacaa 1737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 238; Significance: 1e-131; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 23 - 387
Target Start/End: Original strand, 7092439 - 7092800
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaa-atataactcataaatttggaacg 121  Q
    |||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  7092439 ttctaaacccttgtttcagccccctccatctctctc--aaagtttgctctgatacaaggtctatatttatagtaaacatataactcataaatttggaacg 7092536  T
Q  122 aatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 221  Q
    |||| ||||||||||||||  ||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7092537 aataccacactgaagatacaatt--ttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 7092634  T
Q  222 cgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatatt 321  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||       ||||||||||||||||||||||||||    
T  7092635 cgttcttcatacgatacaaaaatatatttattgtccataaatatatcttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatatt 7092734  T
Q  322 cttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatg 387  Q
    || | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  7092735 ctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattagtgatgatg 7092800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 15 - 353
Target Start/End: Original strand, 7094678 - 7095013
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaa-atataactcataaat 113  Q
    ||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| | || |||||||||||||||    
T  7094678 tgttgccattctaaacccttgtttcagccccctctatctctctc--aaagtttgctctgatacaaggtctatatttataataaacatataactcataaat 7094775  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    |||||||||||| ||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7094776 ttggaacgaataccacactgaagatacgttt--ttttttcctccttcagtgaaagaatatttgcataaaaaatataatatttcctttcaaaatatatttg 7094873  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  7094874 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 7094973  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  7094974 acaatattctccatccatcaaattttgagtcatactacaa 7095013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 15 - 387
Target Start/End: Original strand, 7349529 - 7349899
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  7349529 tgttgcctttctaaacccctgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 7349628  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||||||||||||||||||||||         ||| |||||||||||||||||||| | ||||||||||||||| |||||||||||||||||    
T  7349629 ttggaacaaatatcacactgaagatacgttt---ttttttctcattcagtgaaagaatatttgcctcaaaaatataatattctctttcaaaatatatttg 7349725  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||       ||||||||||||||||||    
T  7349726 catcaaatcgttcttcatgcgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagca 7349825  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatg 387  Q
    |||||||||| | |||||||| |||||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  7349826 acaatattctccatccatcaatttttgagtcatactacaacattctccaccttgactctaaattagtgatgatg 7349899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 15 - 387
Target Start/End: Original strand, 7470278 - 7470653
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaa-atataactcataaat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||  |||||||||||||||||||||||||| || |||||||||||||||    
T  7470278 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagtctgatacaaggtctatatttatagtaaacatataactcataaat 7470375  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnn----ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatata 209  Q
    |||||||||||| ||||||||||||||||||             |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  7470376 ttggaacgaataccacactgaagatacgtttttttttttcttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatata 7470475  T
Q  210 tttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattttt 309  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       | ||||||||||||    
T  7470476 tttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatgttttatattttt 7470575  T
Q  310 agcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatg 387  Q
    ||||| |||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| ||||| |||||||||    
T  7470576 agcaataatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaatttgtgatgatg 7470653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 30 - 387
Target Start/End: Complemental strand, 20299476 - 20299123
Alignment:
Q  30 cccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacgaatatca 128  Q
    |||||||||||||||||||||||||||||  |||||||   ||||||||||||||||||||||||| ||| |||||||||||||| |||||| |||| ||    
T  20299476 cccttgtttcagccccctctatctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaatatggaacaaatacca 20299379  T
Q  129 cactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtcctt 228  Q
    ||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  20299378 cactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttctt 20299282  T
Q  229 catacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttc 328  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | ||    
T  20299281 catacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaataaatcttttatatttttagcaacaatattctccatc 20299182  T
Q  329 catcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatg 387  Q
    ||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  20299181 catcaaattttgagtcatactacaacattctccaccttgactctaaattagtgatgatg 20299123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 15 - 387
Target Start/End: Complemental strand, 28487586 - 28487217
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    |||| |||||||||||||||||||||||||||||||||||||||  |||||||   |||||||| |||||||||||||||  ||| ||||||||||||||    
T  28487586 tgttacctttctaaacccttgtttcagccccctctatctctctc--aaagtttagcctgatacatggtctatatttataggaaaagtataactcataaat 28487489  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    || |||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28487488 ttagaacaaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 28487391  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  28487390 catcaaatcattcttcatacgatacaaaattatatttattgtccataaatatattttcagcacaaaatatatttgaagcaaatcttttatatttttagca 28487291  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatg 387  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  28487290 acaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattagtgatgatg 28487217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 15 - 353
Target Start/End: Complemental strand, 3035754 - 3035417
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  3035754 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 3035657  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| || |||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3035656 ttggaacaaataccatactgaagatacgttttttttctttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 3035557  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  3035556 catcaaatcattcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 3035457  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  3035456 acaatattctccatccatcaaattttgagtcatactacaa 3035417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 15 - 387
Target Start/End: Original strand, 31156167 - 31156532
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||||||||||||||||||||||||||||||||||||      |||||||||  ||||||||| |||||||||||||| ||| |||| |||||||||    
T  31156167 tgttgcctttctaaacccttgtttcagccccctctatctc------aaagtttgccttgatacaagctctatatttatagtaaaagtatagctcataaat 31156260  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| |||||||||||| |||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31156261 ttggaacaaataccacactgaagattcgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 31156358  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||       ||||||||||||||||||    
T  31156359 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagca 31156458  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatg 387  Q
    |||||||||| | |||||||| |||||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  31156459 acaatattctccatccatcaatttttgagtcatactacaacattctccaccttgactctaaattagtgatgatg 31156532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 15 - 353
Target Start/End: Complemental strand, 1850014 - 1849667
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc----------aaagtttgctctgatacaaggtctatatttatagtgaaa-tata 103  Q
    |||||||||||||||||||||||||||||||||||||||||||| |          |||||||||| ||| |||||||||||||||||||| ||| ||||    
T  1850014 tgttgcctttctaaacccttgtttcagccccctctatctctctctctctctctctcaaagtttgctatgaaacaaggtctatatttatagtaaaagtata 1849915  T
Q  104 actcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaa 203  Q
    ||||||||||||||||| |||| |||||||||||| |||||         |||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  1849914 actcataaatttggaacaaataccacactgaagattcgttt--tttttttctccttcagtgaaagaatatctgcatcaaaaatataatattccctttcaa 1849817  T
Q  204 aatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttat 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||    
T  1849816 aatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttat 1849717  T
Q  304 atttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1849716 atttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 1849667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 15 - 350
Target Start/End: Complemental strand, 20626071 - 20625739
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaa-atataactcataaat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||  ||||||| |||||||||||||||| | || |||||||||||||||    
T  20626071 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagtctgatagaaggtctatatttataataaacatataactcataaat 20625974  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    |||||||||||| ||||||||||||||||||         |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  20625973 ttggaacgaataccacactgaagatacgttt--ttttttgctccttcagtgaaaaaatatttgcatcaaaaatataatattccctttcaaaatatatttg 20625876  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
     |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  20625875 tatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 20625776  T
Q  314 acaatattcttcttccatcaaattttgagtcatacta 350  Q
    |||||||||| | ||||||||||||||||||||||||    
T  20625775 acaatattctccatccatcaaattttgagtcatacta 20625739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 15 - 350
Target Start/End: Complemental strand, 20629962 - 20629630
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaa-atataactcataaat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||  ||||||| |||||||||||||||| | || |||||||||||||||    
T  20629962 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagtctgatagaaggtctatatttataataaacatataactcataaat 20629865  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    |||||||||||| ||||||||||||||||||         |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  20629864 ttggaacgaataccacactgaagatacgttt--ttttttgctccttcagtgaaaaaatatttgcatcaaaaatataatattccctttcaaaatatatttg 20629767  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
     |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  20629766 tatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 20629667  T
Q  314 acaatattcttcttccatcaaattttgagtcatacta 350  Q
    |||||||||| | ||||||||||||||||||||||||    
T  20629666 acaatattctccatccatcaaattttgagtcatacta 20629630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 15 - 350
Target Start/End: Complemental strand, 20642381 - 20642049
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaa-atataactcataaat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||  ||||||| |||||||||||||||| | || |||||||||||||||    
T  20642381 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagtctgatagaaggtctatatttataataaacatataactcataaat 20642284  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    |||||||||||| ||||||||||||||||||         |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  20642283 ttggaacgaataccacactgaagatacgttt--ttttttgctccttcagtgaaaaaatatttgcatcaaaaatataatattccctttcaaaatatatttg 20642186  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
     |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  20642185 tatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 20642086  T
Q  314 acaatattcttcttccatcaaattttgagtcatacta 350  Q
    |||||||||| | ||||||||||||||||||||||||    
T  20642085 acaatattctccatccatcaaattttgagtcatacta 20642049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 15 - 353
Target Start/End: Original strand, 7472236 - 7472572
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaa-atataactcataaat 113  Q
    |||||| |||||||||||||||||||||||||||||||||||||  |||||||  |||||||||||||||||||||||||| || |||||||||||||||    
T  7472236 tgttgcttttctaaacccttgtttcagccccctctatctctctc--aaagtttagtctgatacaaggtctatatttatagtaaacatataactcataaat 7472333  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| ||||||||||||||||||         |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7472334 ttggaacaaataccacactgaagatacgttt-ttttttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 7472432  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  7472433 catcaaatcgttcttcatatgatacaataatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 7472532  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  7472533 acaatattctccatccatcaaattttgagtcatactacaa 7472572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 15 - 353
Target Start/End: Original strand, 7351908 - 7352244
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||   |||||||||||| |||||||||||| ||| ||||||||||||||    
T  7351908 tgttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtttatatttatagtaaaagtataactcataaat 7352007  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||||||||||||||||||||||         ||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  7352008 ttggaacaaatatcacactgaagatacgttt---ttttttctcattcagtgaaagaatatttgcctcaaaaatataatattccctttcaaaatatatttg 7352104  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||       ||||||||||||||||||    
T  7352105 catcaaatcgttcttcatgcgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagca 7352204  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||| | |||||||| ||||||||||||||||||    
T  7352205 acaatattctccatccatcaatttttgagtcatactacaa 7352244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 30 - 353
Target Start/End: Complemental strand, 11757246 - 11756927
Alignment:
Q  30 cccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacgaatatca 128  Q
    |||||||||||||||||||||||||||||  |||||||   ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| ||    
T  11757246 cccttgtttcagccccctctatctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaatacca 11757149  T
Q  129 cactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtcctt 228  Q
    ||||||||||||||||         |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||    
T  11757148 cactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatagttctt 11757052  T
Q  229 catacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttc 328  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | ||    
T  11757051 catacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatc 11756952  T
Q  329 catcaaattttgagtcatactacaa 353  Q
    |||||||||||||||||||||||||    
T  11756951 catcaaattttgagtcatactacaa 11756927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 46 - 353
Target Start/End: Complemental strand, 1606478 - 1606173
Alignment:
Q  46 ctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacgaatatcacactgaagatacgttt 144  Q
    |||||||||| || ||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| |||||||||||| |||||    
T  1606478 ctctatctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagattcgttt 1606379  T
Q  145 cnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaat 244  Q
             |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  1606378 ---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaat 1606282  T
Q  245 atatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtc 344  Q
    |||||||||||||||||||||||||||||||||| |||| ||||       |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1606281 atatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtc 1606182  T
Q  345 atactacaa 353  Q
    |||||||||    
T  1606181 atactacaa 1606173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 15 - 353
Target Start/End: Complemental strand, 28485599 - 28485263
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    |||||||||||||||||||||||||| |||| ||||||||||||  |||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  28485599 tgttgcctttctaaacccttgtttcaaccccttctatctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 28485502  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| |||||||||||||||| |         ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28485501 ttggaacaaataccacactgaagatacgtgt-tttttttcctccttcggtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 28485403  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       | ||||||||||||||||    
T  28485402 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatattttatatttttagca 28485303  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||||| ||||||||||||||| |||||||||||    
T  28485302 acaatattcttcatccatcaaattttgaatcatactacaa 28485263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 46 - 387
Target Start/End: Complemental strand, 38396294 - 38395954
Alignment:
Q  46 ctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacgaatatcacactgaagatacgttt 144  Q
    |||| |||||||| |||| |||   ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| ||||| ||||||||||||    
T  38396294 ctctctctctctctcaaaatttagcctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacaccgaagatacgttt 38396195  T
Q  145 cnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaat 244  Q
             |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38396194 --tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaat 38396097  T
Q  245 atatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtc 344  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||| |||||    
T  38396096 atatttattgtacataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttggagtc 38395997  T
Q  345 atactacaaaattctcaaccttgactccaaattagtgatgatg 387  Q
    ||||||||| |||||| |||||||||| |||||||||||||||    
T  38395996 atactacaacattctccaccttgactctaaattagtgatgatg 38395954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 15 - 353
Target Start/End: Complemental strand, 38394019 - 38393685
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  38394019 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 38393922  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| |||||||||||||||||          | |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  38393921 ttggaacaaataccacactgaagatacgtt---attttttcaccttcagtgaaagaatatttgcatcaaaaatataacattccctttcaaaatatatttg 38393825  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||       |||| |||||||||||||    
T  38393824 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaataaattttcagcacaaaatatatttgaaacaaatcttatatatttttagca 38393725  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||| | |||||||||||| || |||||||||||    
T  38393724 acaatattctccatccatcaaatttagaatcatactacaa 38393685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 15 - 353
Target Start/End: Complemental strand, 18345574 - 18345239
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    |||||||||||||||||||||||||| ||||||||||||| |||  ||||||    ||||||||||||||||||||||||| ||| ||||||||||||||    
T  18345574 tgttgcctttctaaacccttgtttcaaccccctctatctccctc--aaagttcagcctgatacaaggtctatatttatagtaaaagtataactcataaat 18345477  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  18345476 ttggaacaaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccatttcaaaatatatttg 18345379  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||| ||||       ||||||||||||||||||    
T  18345378 catcaaatcgttcttcatacggtacaaaaatatatttattgtcaataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagca 18345279  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  18345278 acaatattctccatccatcaaattttgagtcatactacaa 18345239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 15 - 347
Target Start/End: Complemental strand, 24258496 - 24258166
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaatataactcataaatt 114  Q
    ||||||||||||||||||||||||||||||||||||||||      || |||| |||||||||||   |||||||||||| |||||||||||||||||||    
T  24258496 tgttgcctttctaaacccttgtttcagccccctctatctc------aatgtttactctgatacaaaacctatatttatagagaaatataactcataaatt 24258403  T
Q  115 tggaacgaatatcacac--tgaagatacgtttcnnnnnnnn---ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatata 209  Q
    |||||||||||||||||  ||||||||| ||||           |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  24258402 tggaacgaatatcacacactgaagatacatttctttatttttttctccttcagtgaaagaatatttacatcaaaaatataatattccctttcaaaatata 24258303  T
Q  210 tttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattttt 309  Q
    |||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||    
T  24258302 tttgcatcaa-tcgtccttcatactgtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttt 24258204  T
Q  310 agcaacaatattcttcttccatcaaattttgagtcata 347  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24258203 agcaacaatattcttcttccatcaaattttgagtcata 24258166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 15 - 353
Target Start/End: Original strand, 37412384 - 37412714
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||| ||||||||||||||||||||||||| ||||||       | |||| ||||||| ||||||||||||||||||| ||| ||||||||||||||    
T  37412384 tgttgccattctaaacccttgtttcagccccctatatctcc------aggtttactctgattcaaggtctatatttatagtaaaaatataactcataaat 37412477  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    |||||||||||| ||||||||||||||||||         ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  37412478 ttggaacgaataacacactgaagatacgttt---ttttttctccttcagtggaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 37412574  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||| | ||||||||| |||| || |||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  37412575 catcaaatcattcttcatacgttacataattatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 37412674  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  37412675 acaatattctccatccatcaaattttgagtcatactacaa 37412714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 23 - 353
Target Start/End: Original strand, 42331263 - 42331591
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacg 121  Q
    ||||||||||||||||||||||||||||||||      |||||||  |||||||||| ||||||||||||||| ||| ||||||||||||||||||||||    
T  42331263 ttctaaacccttgtttcagccccctctatctc------aaagtttagtctgatacaaagtctatatttatagtaaaagtataactcataaatttggaacg 42331356  T
Q  122 aatatcacactgaagatacgtttcnnnnnnnn---ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatca 218  Q
    |||| |||||| |||||||||||            |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42331357 aataccacactaaagatacgtttttttttttctttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatca 42331456  T
Q  219 aatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaat 318  Q
    |||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  42331457 aatcgttcttcatacggtacaaaaatatacttattgtccataaatatattttcagcacaaaatatatttaaaacaaatcttttatatttttagcaacaat 42331556  T
Q  319 attcttcttccatcaaattttgagtcatactacaa 353  Q
    ||||||| | ||||||||||| |||||||||||||    
T  42331557 attcttcattcatcaaattttaagtcatactacaa 42331591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 23 - 353
Target Start/End: Complemental strand, 21990175 - 21989855
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaat-ataactcataaatttggaacg 121  Q
    ||||||||||||||||||||||| ||||||||       | |||| ||||||| ||||||||||||||||||| |||| |||||||||||||||||||||    
T  21990175 ttctaaacccttgtttcagcccc-tctatctcc------aggtttactctgattcaaggtctatatttatagtaaaattataactcataaatttggaacg 21990083  T
Q  122 aatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 221  Q
    |||| ||||| ||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21990082 aataccacacagaagatacgttt--ttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 21989985  T
Q  222 cgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatatt 321  Q
    ||| ||||||||| |||||||||||||||||||||||||||||||||||||  ||| ||||| ||||       ||||||||||||||||||||||||||    
T  21989984 cgttcttcatacggtacaaaaatatatttattgtccataaatatattttca--acacaatatatttgaaacaaatcttttatatttttagcaacaatatt 21989887  T
Q  322 cttcttccatcaaattttgagtcatactacaa 353  Q
    || | |||||||||||||| ||||||||||||    
T  21989886 ctccatccatcaaattttgggtcatactacaa 21989855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 84 - 353
Target Start/End: Original strand, 21470614 - 21470881
Alignment:
Q  84 tatatttatagtgaaa-tataactcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaa 182  Q
    |||||||||||| ||| ||||||||||||||||||||| |||| ||||| ||||||||||||         |||||||||||||||||||||||||| ||    
T  21470614 tatatttatagtaaaagtataactcataaatttggaacaaataccacaccgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaa 21470710  T
Q  183 aaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaata 282  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21470711 aaatataatattccctttcaaaatatattcgcatcaaatcgttcttcatacgatataaaaatatatttattgtccataaatatattttcagcacaaaata 21470810  T
Q  283 tctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    | ||||       |||||||||||||||||||||||||||| | |||||||||||| |||||| |||||||    
T  21470811 tatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttggagtcaaactacaa 21470881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 15 - 283
Target Start/End: Original strand, 13099732 - 13099993
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||| |||||||||||||||||| |||||||||||||      || |||| || |||| ||||||||||||||||||| ||| ||||||||||||||    
T  13099732 tgttgccattctaaacccttgtttcaaccccctctatctc------aaggtttactttgattcaaggtctatatttatagtaaaagtataactcataaat 13099825  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    |||||||||||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13099826 ttggaacgaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 13099923  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatat 283  Q
     |||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13099924 tatcaaatcgttcttcatacggtacgaaaatatatttattgtccataaatatattttcagcacaaaatat 13099993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 155 - 353
Target Start/End: Complemental strand, 47865528 - 47865330
Alignment:
Q  155 tccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattg 254  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  47865528 tccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattg 47865429  T
Q  255 tccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    ||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||    
T  47865428 tccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttggagtcatactacaa 47865330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 23 - 275
Target Start/End: Original strand, 43253780 - 43254035
Alignment:
Q  23 ttctaaacccttgtttcagccccct--ctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaa 119  Q
    ||||||| |||||||||||||| ||  || |||||||| ||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  43253780 ttctaaaaccttgtttcagccctctttctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaatttggaa 43253879  T
Q  120 cgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaa 219  Q
    | |||| ||||| |||||||| ||          |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  43253880 caaataccacaccgaagatactttcttattttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaa 43253979  T
Q  220 atcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 275  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43253980 atcgttcttcatacgatacaaaaatatatttattgtccataaatatatttttagca 43254035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 15 - 251
Target Start/End: Complemental strand, 20297395 - 20297163
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||| ||||||||||||||||||||||||||||||||||||  |||||||   ||||||||||||| |||||| |||| ||| |||||||| |||||    
T  20297395 tgttgccattctaaacccttgtttcagccccctctatctctctc--aaagtttagcctgatacaaggtccatatttttagtaaaagtataactcgtaaat 20297298  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| ||||||||||||||||||         ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20297297 ttggaacaaataccacactgaagatacgttt---ttttttctccttcggtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 20297201  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatattta 251  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  20297200 catcaaatcgttcttcatacgatacaaaaatatattta 20297163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 26 - 353
Target Start/End: Complemental strand, 3677301 - 3676999
Alignment:
Q  26 taaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaat-ataactcataaatttggaacgaat 124  Q
    |||||||||||||||||||| ||||||||       |||||| ||||||| |||| |||||||||||||| |||  ||||||||||||||||||||||||    
T  3677301 taaacccttgtttcagcccc-tctatctcc------aagtttactctgattcaagatctatatttatagtaaaaacataactcataaatttggaacgaat 3677209  T
Q  125 atcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgt 224  Q
    ||||||||||||||||||||         |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3677208 atcacactgaagatacgttttttttttctctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgt 3677109  T
Q  225 ccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattctt 324  Q
     ||||||||| |||||||||||                   |||||||||||||||||| ||||       ||||||||||||||||||||||||||||     
T  3677108 tcttcatacggtacaaaaatat-------------------attttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctc 3677028  T
Q  325 cttccatcaaattttgagtcatactacaa 353  Q
    | || ||||||||||||||||||||||||    
T  3677027 catctatcaaattttgagtcatactacaa 3676999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 207 - 353
Target Start/End: Complemental strand, 443474 - 443328
Alignment:
Q  207 atatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatt 306  Q
    ||||||||||||||| || ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||    
T  443474 atatttgcatcaaattgttcttcagacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatt 443375  T
Q  307 tttagcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||    
T  443374 tttagcaacaatattctccatccatcaaattttgagtcatactacaa 443328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 189 - 352
Target Start/End: Original strand, 40281824 - 40281989
Alignment:
Q  189 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttg 288  Q
    |||||||| ||| |||||||||  | |||||||  || |||||||| |||||||||||||||||| |||||||||||||||||| |||||||||| ||||    
T  40281824 aatattccttttaaaaatatatccgtatcaaatattctttcatacggtacaaaaatatatttattttccataaatatattttcaacacaaaatatatttg 40281923  T
Q  289 nnnnnnntcttttatatttttagcaacaa--tattcttcttccatcaaattttgagtcatactaca 352  Q
           | ||||||||||||||||||||  | |||||| ||||||||||||||||||||||||||    
T  40281924 aaacaaatattttatatttttagcaacaaattcttcttcatccatcaaattttgagtcatactaca 40281989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 48457686 - 48457604
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||    
T  48457686 tgttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttagcctgatacaaggtctatatttatagtgaaa 48457604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 44597 - 44523
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||    
T  44597 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatttatagt 44523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 443628 - 443504
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||| ||||||||| |||||| ||| |||||||||||      || |||| ||||||| ||| ||||||||||||||| ||| ||||||||||||||    
T  443628 tgttgccattctaaaccattgttttagctccctctatctc------aaggtttactctgattcaaagtctatatttatagtaaaagtataactcataaat 443535  T
Q  114 ttggaacgaatatcacactgaagatacgttt 144  Q
    |||||||||||  ||||||||||||||||||    
T  443534 ttggaacgaattccacactgaagatacgttt 443504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 1049551 - 1049625
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||||| ||||||||||||||||||||||    
T  1049551 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctaatacaaggtctatatttatagt 1049625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 3878610 - 3878540
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||| |||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||    
T  3878610 tgttgtctttctaaacccttgtttcagccccctctatctct----caaagtttgctctgatacaaggtctatatt 3878540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 27306485 - 27306559
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      |||||||| |||||||||||||||||||||||||||    
T  27306485 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttactctgatacaaggtctatatttatagt 27306559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 40946361 - 40946279
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    ||||||||||||||||||||||||||||||||||| || ||||  ||||||||||| ||| ||||||| ||||||||||||||||    
T  40946361 tgttgcctttctaaacccttgtttcagccccctctgtccctct--caaagtttgctatgaaacaaggtttatatttatagtgaaa 40946279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 35662 - 35588
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||| |||||| |||||||||||||||||||||||||||      |||||||||||||||||||||||||||||||||||    
T  35662 tgttgtctttctgaacccttgtttcagccccctctatctc------aaagtttgctctgatacaaggtctatatttatagt 35588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 9680852 - 9680773
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgc-tctgatacaaggtctatatttatagt 95  Q
    ||||||| |||||||||||||||||| ||||||||||||||||  ||| |||| | ||||||||||||||||||||||||||    
T  9680852 tgttgcccttctaaacccttgtttcaaccccctctatctctct--caaggtttacatctgatacaaggtctatatttatagt 9680773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 189 - 275
Target Start/End: Original strand, 12310442 - 12310528
Alignment:
Q  189 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 275  Q
    |||||||| ||| ||||||||||| ||||||||| ||||||||||| |||||||||||||| | ||||| ||| |||| ||||||||    
T  12310442 aatattccttttaaaaatatatttacatcaaatcttccttcatacggtacaaaaatatattaactgtccttaagtataatttcagca 12310528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 18567646 - 18567572
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||||||||||||||||||||||||| |||||||      |||||||| |||||||||||| ||||||||||||||    
T  18567646 tgttgcctttctaaacccttgtttcagccccttctatct------caaagtttactctgatacaagatctatatttatagt 18567572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 31435303 - 31435377
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||||||||||||||||||||||||| |||||||      |||||||| |||||||||||| ||||||||||||||    
T  31435303 tgttgcctttctaaacccttgtttcagccccttctatct------caaagtttactctgatacaagatctatatttatagt 31435377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 144
Target Start/End: Original strand, 40281688 - 40281756
Alignment:
Q  76 acaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgttt 144  Q
    ||||||| ||||||||||  |||||||||||||||||||||||||  ||||||| ||||||||||||||    
T  40281688 acaaggtttatatttataaagaaatataactcataaatttggaacagatatcacgctgaagatacgttt 40281756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 40836998 - 40837072
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||| ||||||||||||| |||||     |||| |||||||||||||||||||||||||||||||    
T  40836998 tgttgcctttctaaacccttctttcagccccctcaatctc-----caaa-tttgctctgatacaaggtctatatttatagt 40837072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 22392495 - 22392432
Alignment:
Q  26 taaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||      ||||||| |||||||||||||||||||||||||||    
T  22392495 taaacccttgtttcagccccctctatctc------aaagtttactctgatacaaggtctatatttatagt 22392432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 20297157 - 20297108
Alignment:
Q  296 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 345  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||    
T  20297157 tcttttatatttttagcaacaatattctccatccatcaaattttgagtca 20297108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 25542563 - 25542490
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||| |||||||||||| ||||||||||||| ||||||||      |||||||||||||||||||||||||||||||||||    
T  25542563 tgttacctttctaaacctttgtttcagcccc-tctatctc------aaagtttgctctgatacaaggtctatatttatagt 25542490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 7188568 - 7188476
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaac 120  Q
    |||||||||||||||||||||||||||||||      ||| |||| ||||||||||| ||||||||||||||| ||| |||  |||||||| |||||||    
T  7188568 ttctaaacccttgtttcagccccctctatct------caaggtttactctgatacaaagtctatatttatagtaaaagtatccctcataaaattggaac 7188476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 11355291 - 11355252
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11355291 tgttgcctttctaaacccttgtttcagccccctctatctc 11355252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 20137365 - 20137404
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  20137365 tgttgcctttctaaacccttgtttcagccccctctatctc 20137404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 21678099 - 21678060
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21678099 tgttgcctttctaaacccttgtttcagccccctctatctc 21678060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 21680060 - 21680021
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21680060 tgttgcctttctaaacccttgtttcagccccctctatctc 21680021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 26804602 - 26804563
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26804602 tgttgcctttctaaacccttgtttcagccccctctatctc 26804563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 9679076 - 9679013
Alignment:
Q  31 ccttgtttcagccccctctatctctctcgcaaagtttgc-tctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||  |||||||| | ||||||||||| ||||||||||||||    
T  9679076 ccttgtttcagccccctctatctctct--caaagtttacatctgatacaagatctatatttatagt 9679013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 10691083 - 10691025
Alignment:
Q  86 tatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgttt 144  Q
    ||||||||| |||||||||||||| ||||||||||  ||||||||| ||||||||||||    
T  10691083 tatttatagagaaatataactcatgaatttggaacagatatcacaccgaagatacgttt 10691025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 22251798 - 22251872
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||| |||||||||||| |||||||||      |||||||| ||||||| |||||| ||||||||||||    
T  22251798 tgttgcctttctaaactcttgtttcagcctcctctatct------caaagtttactctgattcaaggtttatatttatagt 22251872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 10690732 - 10690684
Alignment:
Q  297 cttttatatttttagcaacaatattcttcttccatcaaattttgagtca 345  Q
    |||||||||||||||||||||| |||| | |||||||||||||||||||    
T  10690732 cttttatatttttagcaacaatcttctccctccatcaaattttgagtca 10690684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 1047180 - 1047223
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctc 58  Q
    |||||| ||||||||||| |||||||||||||||||||||||||    
T  1047180 tgttgcttttctaaacccctgtttcagccccctctatctctctc 1047223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 12484976 - 12485023
Alignment:
Q  228 tcatacgatacaaaaatatatttattgtccataaatatattttcagca 275  Q
    |||||||||||||||||||||||  | |||||||||||||||||||||    
T  12484976 tcatacgatacaaaaatatatttgctatccataaatatattttcagca 12485023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 12506407 - 12506454
Alignment:
Q  228 tcatacgatacaaaaatatatttattgtccataaatatattttcagca 275  Q
    |||||||||||||||||||||||  | |||||||||||||||||||||    
T  12506407 tcatacgatacaaaaatatatttgctatccataaatatattttcagca 12506454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 22828889 - 22828928
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  22828889 tgttgcctttctaaactcttgtttcagccccctctatctc 22828928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 38396349 - 38396306
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctc 58  Q
    ||||||||||||||||||||||||||||||||||  ||||||||    
T  38396349 tgttgcctttctaaacccttgtttcagccccctccctctctctc 38396306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 44724612 - 44724573
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  44724612 tgttgcctttctaaacccttgtttcagccccctatatctc 44724573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 347
Target Start/End: Original strand, 43254023 - 43254069
Alignment:
Q  301 tatatttttagcaacaatattcttcttccatcaaattttgagtcata 347  Q
    ||||||||||||||||||||||| | |||||||||||||||| ||||    
T  43254023 tatatttttagcaacaatattctccatccatcaaattttgagacata 43254069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 261
Target Start/End: Complemental strand, 10690854 - 10690773
Alignment:
Q  180 aaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataa 261  Q
    |||| ||| |||||||| ||| ||||||||||||||||||||  ||  ||| | | |||||||||||||||||||| |||||    
T  10690854 aaaatataaaatattccttttaaaaatatatttgcatcaaatattctgtcacatggtacaaaaatatatttattgtacataa 10690773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 95
Target Start/End: Complemental strand, 22108160 - 22108120
Alignment:
Q  55 tctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  22108160 tctctcaaagtttgctttgatacaaggtctatatttatagt 22108120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 95
Target Start/End: Complemental strand, 22137171 - 22137131
Alignment:
Q  55 tctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  22137171 tctctcaaagtttgctttgatacaaggtctatatttatagt 22137131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 24465575 - 24465543
Alignment:
Q  22 tttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||||||||||||||||||    
T  24465575 tttctaaacccttgtttcagccccctctatctc 24465543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 95
Target Start/End: Complemental strand, 40549920 - 40549880
Alignment:
Q  55 tctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  40549920 tctctcaaagtttgctttgatacaaggtctatatttatagt 40549880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 95
Target Start/End: Complemental strand, 40552198 - 40552158
Alignment:
Q  55 tctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  40552198 tctctcaaagtttgctttgatacaaggtctatatttatagt 40552158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 54
Target Start/End: Original strand, 4296199 - 4296230
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||    
T  4296199 ttctaaacccttgtttcagccccctctatctc 4296230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 12657600 - 12657647
Alignment:
Q  228 tcatacgatacaaaaatatatttattgtccataaatatattttcagca 275  Q
    |||||||||||||||||||||||  | ||||| |||||||||||||||    
T  12657600 tcatacgatacaaaaatatatttgctatccatgaatatattttcagca 12657647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 21592399 - 21592438
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||| |||||||||| ||||||||||||||||||||||    
T  21592399 tgttgcatttctaaacctttgtttcagccccctctatctc 21592438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 24748627 - 24748592
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctcta 50  Q
    ||||| ||||||||||||||||||||||||||||||    
T  24748627 tgttgtctttctaaacccttgtttcagccccctcta 24748592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 95
Target Start/End: Original strand, 9027401 - 9027434
Alignment:
Q  62 aagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||| ||||||||||||||||||||||||    
T  9027401 aagtttgctttgatacaaggtctatatttatagt 9027434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 63 - 95
Target Start/End: Complemental strand, 2935344 - 2935312
Alignment:
Q  63 agtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||| ||||||||||||||||||||||||    
T  2935344 agtttgctttgatacaaggtctatatttatagt 2935312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 238; Significance: 1e-131; HSPs: 85)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 15 - 387
Target Start/End: Original strand, 31735779 - 31736147
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    |||||||||||||||||||||||| |||||||||||||||  ||  |||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  31735779 tgttgcctttctaaacccttgttttagccccctctatctcattc--aaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 31735876  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31735877 ttggaacaaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 31735973  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  31735974 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 31736073  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatg 387  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  31736074 acaatattctccttccatcaaattttgagtcatactacaacattctccaccttgactctaaattagtgatgatg 31736147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 15 - 353
Target Start/End: Complemental strand, 47906293 - 47905958
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  47906293 tgttgccattctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 47906194  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| |||||||||||||| |||         |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  47906193 ttggaacaaataccacactgaagatactttt----tttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 47906098  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  47906097 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 47905998  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  47905997 acaatattctccatccatcaaattttgagtcatactacaa 47905958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 15 - 353
Target Start/End: Original strand, 15295092 - 15295437
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc--------aaagtttgctctgatacaaggtctatatttatagtgaa-atataac 105  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |        ||||||||||||||||||||||||||||||||||| || |||||||    
T  15295092 tgttgcctttctaaacccttgtttcagccctctctatctctctctctctctctcaaagtttgctctgatacaaggtctatatttatagtaaacatataac 15295191  T
Q  106 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 205  Q
    ||||||||| |||||||||| |||||||||||||| |||         |||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  15295192 tcataaattaggaacgaataccacactgaagatacattt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattcgctttcaaaa 15295289  T
Q  206 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 305  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  15295290 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 15295389  T
Q  306 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15295390 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 15295437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 15 - 353
Target Start/End: Original strand, 9463502 - 9463838
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  9463502 tgttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 9463601  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| |||| |||||||||||||         |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9463602 ttggaacaaataccacaatgaagatacgttt---ttttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 9463698  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||| |||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  9463699 cattaaattgttcttcatacgatataaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 9463798  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  9463799 acaatattctccatccatcaaattttgagtcatactacaa 9463838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 15 - 353
Target Start/End: Complemental strand, 24325686 - 24325349
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc--aaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataa 111  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  24325686 tgttgcctttctaa-cccttgtttcagccccctctatctctctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagtataactcataa 24325588  T
Q  112 atttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatt 211  Q
    ||||||||| |||| |||||| ||||||| |||         |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  24325587 atttggaacaaataccacactaaagatacattt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattcactttcaaaatatatt 24325491  T
Q  212 tgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttag 311  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||       ||||||||||||||||    
T  24325490 tgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttag 24325391  T
Q  312 caacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||||| | |||||||||||||||||||||||||||    
T  24325390 caacaatattctccatccatcaaattttgagtcatactacaa 24325349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 15 - 387
Target Start/End: Original strand, 27337196 - 27337564
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||   || |||||||||||||||||||||| ||| |||||| |||||||    
T  27337196 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagcctaatacaaggtctatatttatagtaaaagtataacgcataaat 27337293  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| ||||  ||||||||||||          ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27337294 ttggaacaaataccacatcgaagatacgtttttttttt---tccttcagttaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 27337390  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||| |||||||||||||    
T  27337391 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttatatatttttagca 27337490  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatg 387  Q
    |||||||||  | |||||||||||| |||||||||||||| |||||| |||||||||| |||||||||||||||    
T  27337491 acaatattccccatccatcaaatttggagtcatactacaacattctccaccttgactctaaattagtgatgatg 27337564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 15 - 353
Target Start/End: Complemental strand, 39932096 - 39931764
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaa-atataactcataaat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||    |||||||  ||| |||||||||||||||||||||| || |||||||||||||||    
T  39932096 tgttgcctttctaaacccttgtttcagccccctctatctctc----aaagttttgtctcatacaaggtctatatttatagtaaacatataactcataaat 39932001  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||||||||  |||||||||||||||||         |||||||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  39932000 ttggaacgaatactacactgaagatacgttt---ttttttctccttcaataaaagaatatttgcatcaaaagtataatattccctttcaaaatatatttg 39931904  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  39931903 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 39931804  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  39931803 acaatattctccatccatcaaattttgagtcatactacaa 39931764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 15 - 353
Target Start/End: Original strand, 9459675 - 9460011
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  9459675 tgttgactttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 9459774  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| |||| |||||||||||||         |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9459775 ttggaacaaataccacaatgaagatacgttt---ttttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 9459871  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||| |||| || ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  9459872 cattaaattgttcttcatacggtataaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 9459971  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  9459972 acaatattctccatccatcaaattttgagtcatactacaa 9460011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 15 - 323
Target Start/End: Original strand, 21948445 - 21948751
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaa-atataactcataaat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||  | |||||||||||||||||||||||| || |||||||||||||||    
T  21948445 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagtatgatacaaggtctatatttatagtaaacatataactcataaat 21948542  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    |||||||||||| ||||||||||||||||||         ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  21948543 ttggaacgaataccacactgaagatacgttt-tttttttcctccttctgtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 21948641  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  21948642 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 21948741  T
Q  314 acaatattct 323  Q
    ||||||||||    
T  21948742 acaatattct 21948751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 15 - 353
Target Start/End: Original strand, 27339388 - 27339728
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    |||||||||||||| |||||||||||||||||||||||||||||  |||||||   || |||||||||||||||||||||| ||| ||||||||||||||    
T  27339388 tgttgcctttctaagcccttgtttcagccccctctatctctctc--aaagtttagcctaatacaaggtctatatttatagtaaaagtataactcataaat 27339485  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| ||||||||||||||||| |         ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27339486 ttggaacaaataccacactgaagatacgtt-cttttttttttccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 27339584  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataa----atatattttcagcacaaaatatctttgnnnnnnntcttttatattttt 309  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||| ||||       ||||||||||||||    
T  27339585 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatatattttcagcacaaaatatatttgaaacaaatcttttatattttt 27339684  T
Q  310 agcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||||||| | ||| |||||||| ||||||||||||||    
T  27339685 agcaacaatattctccatccgtcaaatttggagtcatactacaa 27339728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 15 - 353
Target Start/End: Original strand, 17324894 - 17325225
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||| |||||||||||||||| |||||||| |||||   ||   | |||| ||||| | ||||||||||||||||||| ||| ||||||||||||||    
T  17324894 tgttgccattctaaacccttgttttagccccctgtatct---tc---aggtttactctggttcaaggtctatatttatagtaaaagtataactcataaat 17324987  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    |||||||||||||||| ||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17324988 ttggaacgaatatcaccctgaagatacgttt--tttttttctccttcagtgaaagaatatttgcataaaaaatataatattcccttgcaaaatatatttg 17325085  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    |||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||| | |||||||| ||||       ||||||||||||||||||    
T  17325086 catcaaatcgtttttcatacggtacaaaaatatatttattgtccataaatatattttcaactcaaaatatatttgaaacaaatcttttatatttttagca 17325185  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  17325186 acaatattctccatccatcaaattttgagtcatactacaa 17325225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 15 - 353
Target Start/End: Complemental strand, 48665200 - 48664854
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    |||||||||||||||||||||||||| |||||||   |||| ||  || |||| ||||||| ||||||||||||||||||| ||| ||||||||||||||    
T  48665200 tgttgcctttctaaacccttgtttcaaccccctccccctctatcttaaggtttactctgattcaaggtctatatttatagtaaaagtataactcataaat 48665101  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctc-------cttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaat 206  Q
    ||||||| ||||  |||||||||||||||||          |        ||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  48665100 ttggaacaaatactacactgaagatacgttttttttttttttttttctttcttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaat 48665001  T
Q  207 atatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatt 306  Q
    |||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||    
T  48665000 atatgtgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatt 48664901  T
Q  307 tttagcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||    
T  48664900 tttagcaacaatattctccatccatcaaattttgagtcatactacaa 48664854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 23 - 353
Target Start/End: Original strand, 28998519 - 28998842
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacg 121  Q
    ||||||||||||||||||||| ||||||||||      ||||||| ||||||| ||| ||||||||||||||| ||| ||||||||||||||||||||||    
T  28998519 ttctaaacccttgtttcagcctcctctatctc------aaagtttactctgattcaaagtctatatttatagtaaaagtataactcataaatttggaacg 28998612  T
Q  122 aatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 221  Q
    |||| |||||| || ||||| ||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28998613 aataccacactaaatatacggtt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 28998710  T
Q  222 cgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatatt 321  Q
      | |||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||        ||||||||| ||||||||||||||||    
T  28998711 atttcttcgtacggtacaaaaatgtatttattgtccataaatatattttcagcacaaaatatattttaaacaaatcttttatagttttagcaacaatatt 28998810  T
Q  322 cttcttccatcaaattttgagtcatactacaa 353  Q
    || | |||||||||||||||||||||||||||    
T  28998811 ctccatccatcaaattttgagtcatactacaa 28998842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 23 - 353
Target Start/End: Original strand, 29004235 - 29004558
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacg 121  Q
    ||||||||||||||||||||| ||||||||||      ||||||| ||||||| ||| ||||||||||||||| ||| ||||||||||||||||||||||    
T  29004235 ttctaaacccttgtttcagcctcctctatctc------aaagtttactctgattcaaagtctatatttatagtaaaagtataactcataaatttggaacg 29004328  T
Q  122 aatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 221  Q
    |||| |||||| || ||||| ||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29004329 aataccacactaaatatacggtt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 29004426  T
Q  222 cgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatatt 321  Q
      | |||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||        ||||||||| ||||||||||||||||    
T  29004427 atttcttcgtacggtacaaaaatgtatttattgtccataaatatattttcagcacaaaatatattttaaacaaatcttttatagttttagcaacaatatt 29004526  T
Q  322 cttcttccatcaaattttgagtcatactacaa 353  Q
    || | |||||||||||||||||||||||||||    
T  29004527 ctccatccatcaaattttgagtcatactacaa 29004558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 23 - 350
Target Start/End: Original strand, 2949497 - 2949810
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacg 121  Q
    ||||||||||||||||||||||||||||||||      || |||| ||| ||| |||  ||||||||||| || ||| ||||||||||||||||||||||    
T  2949497 ttctaaacccttgtttcagccccctctatctc------aaggttttctcggattcaatatctatatttattgtaaaagtataactcataaatttggaacg 2949590  T
Q  122 aatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 221  Q
    |||| ||      ||||||||||         ||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  2949591 aatacca------agatacgttt--tttttttctc-ttcagtgaaagaatatttgtatcaaaaatataatattccctttcaaaatatatttgcatcaaat 2949681  T
Q  222 cgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatatt 321  Q
    | | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||||||||||    
T  2949682 cattcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatatt 2949781  T
Q  322 cttcttccatcaaattttgagtcatacta 350  Q
    |||| ||||| ||||||||||||||||||    
T  2949782 cttcatccatgaaattttgagtcatacta 2949810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 170 - 353
Target Start/End: Original strand, 6115532 - 6115716
Alignment:
Q  170 atatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattt 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6115532 atatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtcattcatacgatacaaaaatatatttattgtccataaatatattt 6115631  T
Q  270 tcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaa-ttttgagtcatactacaa 353  Q
    |||||||||||||| ||||       |||||||||||||||||||||||||||| | ||||||||| ||||||||||| ||||||    
T  6115632 tcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttttgagtcatcctacaa 6115716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 165 - 353
Target Start/End: Original strand, 45693834 - 45694022
Alignment:
Q  165 aaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaata 264  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  45693834 aaagaatatttgcataaaaaatatattattctctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaata 45693933  T
Q  265 tattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||| |||||||||||| ||||       |||||||||||||||||||||||||||| | ||||||||||||||| ||||| |||||    
T  45693934 tatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgaatcatagtacaa 45694022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 163 - 353
Target Start/End: Original strand, 4131690 - 4131880
Alignment:
Q  163 tgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatattta-ttgtccataa 261  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||    
T  4131690 tgaaagaatatttgcatcaaaa-tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatttgtccataa 4131788  T
Q  262 atatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||| |||| |||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  4131789 atatatgttcaacacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 4131880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 16 - 233
Target Start/End: Original strand, 2510583 - 2510801
Alignment:
Q  16 gttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatt 114  Q
    ||||||||| ||||||||||||||||||||||||||||||||  ||||||||   ||||||||||||||||||||||||| ||| |||||||||||||||    
T  2510583 gttgcctttataaacccttgtttcagccccctctatctctct--caaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaatt 2510680  T
Q  115 tggaacgaatatcacactgaagatacg--tttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatattt 212  Q
    |||||| |||| ||||||||| |||||  |||         |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  2510681 tggaacaaataccacactgaaaatacgttttttttctttccctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatattt 2510780  T
Q  213 gcatcaaatcgtccttcatac 233  Q
    |||||||||||| ||||||||    
T  2510781 gcatcaaatcgttcttcatac 2510801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 46 - 243
Target Start/End: Original strand, 46432011 - 46432207
Alignment:
Q  46 ctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacgaatatcacactgaagatacgttt 144  Q
    |||| |||||||| ||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| |||| |||||||||||||    
T  46432011 ctctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacagtgaagatacgttt 46432110  T
Q  145 cnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaa 243  Q
             |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  46432111 --tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaa 46432207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 167 - 387
Target Start/End: Complemental strand, 6997395 - 6997182
Alignment:
Q  167 agaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatata 266  Q
    ||||||||||||| ||||||||||||||| |||||||      ||||||||||||||| ||||||||| || ||||||||||||||||||||||| ||||    
T  6997395 agaatatttgcatcaaaaatataatattctctttcaa------tttgcatcaaatcgttcttcatacggtataaaaatatatttattgtccataa-tata 6997303  T
Q  267 ttttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaacctt 366  Q
    |||| |||||||||||| ||||       ||||||||||||||||||| |||||||| | |||||||||||||||||||||||| || |||||| |||||    
T  6997302 tttttagcacaaaatatatttgaaacaaatcttttatatttttagcaataatattctccatccatcaaattttgagtcatactataacattctccacctt 6997203  T
Q  367 gactccaaattagtgatgatg 387  Q
    ||||| |||||||||||||||    
T  6997202 gactctaaattagtgatgatg 6997182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 157 - 317
Target Start/End: Complemental strand, 6996221 - 6996067
Alignment:
Q  157 cttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtc 256  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||      ||| ||||||||||| ||||||||| ||||||||||||| |||||||    
T  6996221 cttcagtgaaagaatatttgcaacaaaaatataatattccctttcaa------tttacatcaaatcgttcttcatacggtacaaaaatatatgtattgtc 6996128  T
Q  257 cataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaa 317  Q
    ||||||||||||||||||||||||||| ||||       ||||||||||||||||||||||    
T  6996127 cataaatatattttcagcacaaaatatatttgaaacaagtcttttatatttttagcaacaa 6996067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 64 - 221
Target Start/End: Original strand, 26520419 - 26520580
Alignment:
Q  64 gtttgctctgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgtttc----nnnnnnnnctcctt 159  Q
    |||| ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||            || |||    
T  26520419 gtttactctgatacaaagtctatatttatagagaaatataacttataaatttggaacgaatatcacactgaagatacatttcttttgtttttttcttctt 26520518  T
Q  160 cagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 221  Q
    | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26520519 cggtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 26520580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 240 - 353
Target Start/End: Original strand, 46432521 - 46432634
Alignment:
Q  240 aaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaatttt 339  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||||    
T  46432521 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 46432620  T
Q  340 gagtcatactacaa 353  Q
    ||||||||||||||    
T  46432621 gagtcatactacaa 46432634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 202 - 353
Target Start/End: Complemental strand, 16561284 - 16561133
Alignment:
Q  202 aaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntctttt 301  Q
    ||||||||||||  ||||||  ||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| ||||       | ||||    
T  16561284 aaaatatatttgtttcaaatattccttcatacggtacaaaaagatatttattgtcaataaatatattttcagcacaaaatatatttgaaacaaatatttt 16561185  T
Q  302 atatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||| ||||    
T  16561184 atatttttagcaacaatattcttcatccaacaaattttgaatcatacaacaa 16561133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 189 - 275
Target Start/End: Original strand, 11693580 - 11693666
Alignment:
Q  189 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 275  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11693580 aatattccctttaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatttattgtccataaatatattttcagca 11693666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 73 - 216
Target Start/End: Original strand, 6115395 - 6115541
Alignment:
Q  73 gatacaaggtctatatttatagtgaaatataac--tcataaatttggaacgaatatcacactgaa---gatacgtttcnnnnnnnnctccttcagtgaaa 167  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||| |    |||||||||         |||||||| |||||    
T  6115395 gatacaaggtctatatttatagagaaatataacgctcataaatttggaacgaatatcacactaatagtgatacgttt--tttttttctccttcaatgaaa 6115492  T
Q  168 gaatatttgcataaaaaatataatattccctttcaaaatatatttgcat 216  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6115493 gaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 6115541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 189 - 275
Target Start/End: Original strand, 13785662 - 13785748
Alignment:
Q  189 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 275  Q
    |||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||| | || ||||||||||||||||||    
T  13785662 aatattccttttaaaaatatatttgcatcaaatcttccttcatacgatacaaaaatatatttactatctataaatatattttcagca 13785748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 47177385 - 47177307
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||| ||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||    
T  47177385 tgttgcttttctaaacccttgtttcagccccctctatctctct--caaagtttgctttgatacaaggtctatatttatagt 47177307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 47179736 - 47179658
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||| ||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||    
T  47179736 tgttgcttttctaaacccttgtttcagccccctctatctctct--caaagtttgctttgatacaaggtctatatttatagt 47179658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 72 - 272
Target Start/End: Complemental strand, 14352946 - 14352759
Alignment:
Q  72 tgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtg-aaagaa 170  Q
    ||||||| | ||| ||||||||| |||||||||||| |||||||||||| |||||||| ||||||||||||||          |||||||  | |||  |    
T  14352946 tgatacatgatctgtatttatagagaaatataactcgtaaatttggaacaaatatcacgctgaagatacgttt-------tcttccttcaacgcaaaata 14352854  T
Q  171 tatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatatttt 270  Q
    ||||||||| |       |||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||| | | ||||||||||||||    
T  14352853 tatttgcatca-------aatattccctttaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatttactattcataaatatatttt 14352761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 28842518 - 28842442
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||| ||||||||||||    
T  28842518 tgttgcctttctaaacccttgtttcagccccctctatctct----caaagtttgctctgatacaaggtttatatttatagt 28842442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 20302482 - 20302410
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttata 93  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||    
T  20302482 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatttata 20302410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 2617539 - 2617461
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    ||||| ||||||||||||||||||||||| ||||||||||      |||||||||||||||||||||||||||||||||||||||    
T  2617539 tgttgtctttctaaacccttgtttcagcctcctctatctc------aaagtttgctctgatacaaggtctatatttatagtgaaa 2617461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 51750062 - 51749988
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      | ||||||||||||||||||||||||||||||||||    
T  51750062 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggtctatatttatagt 51749988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 16561490 - 16561367
Alignment:
Q  22 tttctaaacccttgttt-cagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaatataactcataaatttggaac 120  Q
    ||||||| ||||||||| ||||| | |||| ||||||| ||| ||||  ||||||| ||||| ||||||||||| ||||||||||||||||||||| |||    
T  16561490 tttctaatcccttgttttcagcctc-tctacctctctctcaaggtttcatctgatataaggtttatatttatagagaaatataactcataaatttgaaac 16561392  T
Q  121 gaatatcacactgaagatacgtttc 145  Q
    | ||||||| ||||||||| |||||    
T  16561391 ggatatcacgctgaagataagtttc 16561367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 25127895 - 25127808
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgc-tctgatacaaggtctatatttatagtgaaata 101  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| |||| | ||| ||||||||| ||||||||||| ||||||    
T  25127895 tgttgcctttctaaacccttgtttcaggcccctctatctctctctcaaggtttacatctaatacaaggtttatatttatagagaaata 25127808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 28840703 - 28840627
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||| ||||||||||||||||||||| |||||| ||||||||    |||||||||||||||||||||||||||||||||||    
T  28840703 tgtttcctttctaaacccttgtttcatccccctgtatctctc----aaagtttgctctgatacaaggtctatatttatagt 28840627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 6823038 - 6822971
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatat 88  Q
    |||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||||||||    
T  6823038 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatat 6822971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 12302763 - 12302842
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgc-tctgatacaaggtctatatttatagt 95  Q
    |||||| ||||||||||||||||||||||||||||||||||||  ||| |||| | ||||||||||||||||||||||||||    
T  12302763 tgttgcatttctaaacccttgtttcagccccctctatctctct--caaggtttacatctgatacaaggtctatatttatagt 12302842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 13215104 - 13215030
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      |||| ||| |||||||||||||||||||||||||||    
T  13215104 tgttgcctttctaaacccttgtttcagccccctctatct------caaaatttactctgatacaaggtctatatttatagt 13215030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 13761860 - 13761786
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||| ||||||||      | ||||||||||||||||||||||||||||||||||    
T  13761860 tgttgcctttctaaacccttgtttcagccctctctatct------ccaagtttgctctgatacaaggtctatatttatagt 13761786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 41646943 - 41646869
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||| ||||||||||||||||||      |||||||| |||||||||||||||||||||||||||    
T  41646943 tgttgcctttctaaacccttatttcagccccctctatct------caaagtttactctgatacaaggtctatatttatagt 41646869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 6995958 - 6996063
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||||||||||||| ||||||| ||||||||||||||      ||  ||| ||||||| ||||||||||||||||| | ||| ||||||||||||||    
T  6995958 tgttgcctttctaaaccgttgtttcggccccctctatctc------aagatttactctgattcaaggtctatatttataataaaagtataactcataaat 6996051  T
Q  114 ttggaacgaata 125  Q
    ||||||||||||    
T  6996052 ttggaacgaata 6996063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 96 - 272
Target Start/End: Complemental strand, 10115738 - 10115572
Alignment:
Q  96 gaaatataactcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtg-aaagaatatttgcataaaaaatataatatt 194  Q
    |||||||||||||||||||||||||| ||||||| ||||||||| ||||         ||| ||||||| ||| ||||||||||| |||       ||||    
T  10115738 gaaatataactcataaatttggaacggatatcacgctgaagatatgttt--ttttttcctcattcagtgcaaaaaatatttgcatcaaa-------tatt 10115648  T
Q  195 ccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttca 272  Q
    || ||| ||||||||||||||||||||  |||||||||||  | ||||  ||||||||||||||||||||||||||||    
T  10115647 ccgtttaaaaatatatttgcatcaaatattccttcatacgggataaaa--atatttattgtccataaatatattttca 10115572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 6823908 - 6823840
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatat 88  Q
    ||||||||||||||||||||||||||||||||     |||| || |||||||||||||||||||||||||||||    
T  6823908 tgttgcctttctaaacccttgtttcagccccc-----ctctatctcaaagtttgctctgatacaaggtctatat 6823840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 15823569 - 15823495
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||||||||||||||||||||||||||| |||||||      |||||| || ||||||||||||||||||||||||    
T  15823569 tgttgcctttctaaacccttgtttcagccccctttatctct------aagtttactttgatacaaggtctatatttatagt 15823495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 16231624 - 16231550
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||| |||||| ||||||||||||||||||||||||||      |||||||||| ||||||||||||||||||||||||    
T  16231624 tgttgcttttctagacccttgtttcagccccctctatctc------aaagtttgctttgatacaaggtctatatttatagt 16231550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 28207324 - 28207398
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||| |||||||||||||||||||||||||||||||||      ||||||||  ||||||||||||||||||||||||||    
T  28207324 tgttgtctttctaaacccttgtttcagccccctctatct------caaagtttagtctgatacaaggtctatatttatagt 28207398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 38925736 - 38925810
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||| ||| ||||||||||||||||||||||      |||||||| |||||||||||||||||||||||||||    
T  38925736 tgttgcctttctgaactcttgtttcagccccctctatct------caaagtttactctgatacaaggtctatatttatagt 38925810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 51752388 - 51752314
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||| ||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  51752388 tgttacctttctaaactcttgtttcagccccctctatctcc------aagtttgctctgatacaaggtctatatttatagt 51752314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 10400094 - 10400159
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatag 94  Q
    |||||||||||||||||||||||||||||||| |      ||||||||||||||||||||||||||||||||    
T  10400094 ttctaaacccttgtttcagccccctctatctccc------agtttgctctgatacaaggtctatatttatag 10400159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 32260883 - 32260833
Alignment:
Q  225 ccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 275  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  32260883 ccttcatacggtacaaaaatatatttattgttcataaatatattttcagca 32260833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 16226190 - 16226116
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||| ||||||||||||||||| || ||||||||||||      |||||||||| ||||||||||||||||||||||||    
T  16226190 tgttgcttttctaaacccttgttttagacccctctatctc------aaagtttgctttgatacaaggtctatatttatagt 16226116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 20291480 - 20291406
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||| | ||||||||||      |||| |||||||| ||||||||||||||||||||||    
T  20291480 tgttgcctttctaaacccttgtttcatctccctctatct------caaaatttgctctaatacaaggtctatatttatagt 20291406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 32260795 - 32260746
Alignment:
Q  296 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 345  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  32260795 tcttttatatttttagcaacaatcttcttcatccatcaaattttgagtca 32260746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 47451671 - 47451597
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||| ||| |||||||||||| |||||||||||||||      ||||||| |||||||||||||||||||||||||||    
T  47451671 tgttgccattccaaacccttgtttaagccccctctatctc------aaagtttactctgatacaaggtctatatttatagt 47451597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 18307132 - 18307059
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatag 94  Q
    |||||||||||||||||||||||||||||||||||||||      ||| |||| | ||||||||| ||||||||||||||    
T  18307132 tgttgcctttctaaacccttgtttcagccccctctatct------caaggtttacactgatacaatgtctatatttatag 18307059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 25248772 - 25248841
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatattt 90  Q
    |||||||||||||||||||||||||||||||||||||||      ||| |||| ||||||||||| ||||||||||    
T  25248772 tgttgcctttctaaacccttgtttcagccccctctatct------caaggtttactctgatacaaagtctatattt 25248841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 17186386 - 17186458
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttata 93  Q
    |||||||||||||||||||| ||||||||||||||||||      ||| ||||||||||||||||  ||||||||||||    
T  17186386 tgttgcctttctaaacccttatttcagccccctctatct------caaggtttgctctgatacaaaatctatatttata 17186458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 17318916 - 17318877
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17318916 tgttgcctttctaaacccttgtttcagccccctctatctc 17318877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 31423132 - 31423171
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  31423132 tgttgcctttctaaacccttgtttcagccccctctatctc 31423171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 39462540 - 39462464
Alignment:
Q  17 ttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    |||| |||||||||| |||||||||||  |||||||||      ||||||| |||||||||||||||||||||||||||||||    
T  39462540 ttgcatttctaaacctttgtttcagccttctctatctc------aaagtttactctgatacaaggtctatatttatagtgaaa 39462464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 236 - 282
Target Start/End: Original strand, 13112047 - 13112093
Alignment:
Q  236 tacaaaaatatatttattgtccataaatatattttcagcacaaaata 282  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||    
T  13112047 tacaaaaatatatttattgtccatgaatatattttcagcataaaata 13112093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 16428676 - 16428638
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatct 53  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16428676 tgttgcctttctaaacccttgtttcagccccctctatct 16428638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 25251533 - 25251607
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||| ||||||||||| |||||||||||||||||||||      ||| |||| ||||||||||| |||||||||||||||    
T  25251533 tgttgtctttctaaacctttgtttcagccccctctatct------caaggtttactctgatacaaagtctatatttatagt 25251607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 18839610 - 18839571
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  18839610 tgttgcctatctaaacccttgtttcagccccctctatctc 18839571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 26613503 - 26613571
Alignment:
Q  23 ttctaaacccttgttt-cagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatag 94  Q
    |||||||||||||||| ||||||||||||||||||    || ||||  |||||||||||||||||||||||||    
T  26613503 ttctaaacccttgttttcagccccctctatctctc----aaggtttcatctgatacaaggtctatatttatag 26613571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 31425277 - 31425316
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  31425277 tgttgcctttctaaacccttgtttcagccccctttatctc 31425316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 49495468 - 49495531
Alignment:
Q  26 taaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||||||||||||||||||||||      ||| |||| ||||||||||| |||||||||||||||    
T  49495468 taaacccttgtttcagccccctctatct------caaggtttactctgatacaaagtctatatttatagt 49495531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 4131637 - 4131678
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctc 56  Q
    ||||||| ||||||| ||||||||||||||||||||||||||    
T  4131637 tgttgccattctaaatccttgtttcagccccctctatctctc 4131678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 11457733 - 11457807
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||| ||||||||||| |||||||||||||||||||||      ||| |||| | ||||||||| |||||||||||||||    
T  11457733 tgttgtctttctaaaccattgtttcagccccctctatct------caaggtttacactgatacaatgtctatatttatagt 11457807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 50079085 - 50079118
Alignment:
Q  21 ctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||    
T  50079085 ctttctaaacccttgtttcagccccctctatctc 50079118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 6115344 - 6115376
Alignment:
Q  22 tttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||||||||||||||||||    
T  6115344 tttctaaacccttgtttcagccccctctatctc 6115376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 32261014 - 32260950
Alignment:
Q  76 acaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatac 140  Q
    ||||| ||||||||||||| |||||||||||| |||||||| |||| || ||||| |||| ||||    
T  32261014 acaagatctatatttatagagaaatataactcgtaaatttgaaacggatgtcacattgaatatac 32260950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 298 - 345
Target Start/End: Original strand, 11693706 - 11693753
Alignment:
Q  298 ttttatatttttagcaacaatattcttcttccatcaaattttgagtca 345  Q
    ||||||| ||||||||| ||| |||||| |||||||||||||||||||    
T  11693706 ttttataattttagcaataatcttcttcatccatcaaattttgagtca 11693753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 97 - 128
Target Start/End: Original strand, 13785580 - 13785611
Alignment:
Q  97 aaatataactcataaatttggaacgaatatca 128  Q
    ||||||||||||||||||||||||||||||||    
T  13785580 aaatataactcataaatttggaacgaatatca 13785611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 31489938 - 31489899
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  31489938 tgttacctttctaaacccttgtttcaaccccctctatctc 31489899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 46
Target Start/End: Original strand, 46431965 - 46431996
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccc 46  Q
    ||||||||||||||||||||||||||||||||    
T  46431965 tgttgcctttctaaacccttgtttcagccccc 46431996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 345
Target Start/End: Original strand, 13785786 - 13785835
Alignment:
Q  296 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 345  Q
    ||||| ||||||||||| |||||||||| | |||||||| ||||||||||    
T  13785786 tctttcatatttttagcgacaatattctccatccatcaatttttgagtca 13785835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 95
Target Start/End: Complemental strand, 23783533 - 23783500
Alignment:
Q  62 aagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||| ||||||||||||||||||||||||    
T  23783533 aagtttgctttgatacaaggtctatatttatagt 23783500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 6756550 - 6756514
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctat 51  Q
    |||||||||||||| |||||||||||| |||||||||    
T  6756550 tgttgcctttctaagcccttgtttcagtcccctctat 6756514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 10115506 - 10115466
Alignment:
Q  305 tttttagcaacaatattcttcttccatcaaattttgagtca 345  Q
    ||||| ||||||||||||||  |||||||||||||||||||    
T  10115506 ttttttgcaacaatattcttaatccatcaaattttgagtca 10115466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 99
Target Start/End: Original strand, 13449856 - 13449884
Alignment:
Q  71 ctgatacaaggtctatatttatagtgaaa 99  Q
    |||||||||||||||||||||||||||||    
T  13449856 ctgatacaaggtctatatttatagtgaaa 13449884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 47
Target Start/End: Complemental strand, 16432428 - 16432396
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccct 47  Q
    ||||||||||||||||||||||||| |||||||    
T  16432428 tgttgcctttctaaacccttgtttctgccccct 16432396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 232; Significance: 1e-128; HSPs: 88)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 15 - 389
Target Start/End: Original strand, 22132646 - 22133021
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccc---tctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcata 110  Q
    |||||||||||||||||||||||||||||||    ||| |||||||| ||||||||   ||||||||||||||||||||||||| ||| |||||||||||    
T  22132646 tgttgcctttctaaacccttgtttcagcccctctatctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcata 22132745  T
Q  111 aatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatat 210  Q
    |||||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22132746 aatttggaacaaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 22132842  T
Q  211 ttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattttta 310  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||    
T  22132843 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttta 22132942  T
Q  311 gcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatgtc 389  Q
    ||||||||||||| | ||||||||||||||| ||||||||||| |||||| |||||||||||||||| |||||||||||    
T  22132943 gcaacaatattctccatccatcaaattttgaatcatactacaacattctccaccttgactccaaatttgtgatgatgtc 22133021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 15 - 389
Target Start/End: Original strand, 14787687 - 14788055
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||| ||||||||||||||||||||||||||||||||||    |||||||  | |||||||||||||||||||||||| ||| ||||||||||||||    
T  14787687 tgttgccattctaaacccttgtttcagccccctctatctctc----aaagtttagtatgatacaaggtctatatttatagtaaaagtataactcataaat 14787782  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    |||||||||||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14787783 ttggaacgaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 14787879  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||       ||||||||||||||||||    
T  14787880 catcaaatcgttctttatacggtacaaaaatatatttattgtccataaatatattttcaccacaaaatatatttgaaacaaatcttttatatttttagca 14787979  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatgtc 389  Q
    ||| |||||| | ||||||||||||||||||||||||||| |||||| |||||||||| ||||||| |||||||||    
T  14787980 acattattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattagcgatgatgtc 14788055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 15 - 353
Target Start/End: Original strand, 17662490 - 17662824
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  17662490 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttgctctgatacaaggtctatatttatagtaaaagtataactcataaat 17662587  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| |||||||||||||| |||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17662588 ttggaacaaataccacactgaagatactttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 17662684  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||        ||||||||||||||||||    
T  17662685 catcaaatcgttcttcgtacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttaaaacaaatcttttatatttttagca 17662784  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||| | ||||||||||||  |||||||||||||    
T  17662785 acaatattctccatccatcaaatttgtagtcatactacaa 17662824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 15 - 353
Target Start/End: Complemental strand, 24348295 - 24347961
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagttt-gctctgatacaaggtctatatttatagtgaaa-tataactcataaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||||||||||||||||||||| ||| |||||||||||||    
T  24348295 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagct-tgatacaaggtctatatttatagtaaaagtataactcataaa 24348199  T
Q  113 tttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatattt 212  Q
    |||||||| |||| |||| ||||||||| |||         |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24348198 tttggaacaaataccacattgaagatactttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatattt 24348101  T
Q  213 gcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagc 312  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||       |||||||||||||||||    
T  24348100 gcatcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttc-gcacaaaatatatttgaaacaaatcttttatatttttagc 24348002  T
Q  313 aacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  24348001 aacaatattctccatccatcaaattttgagtcatactacaa 24347961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 15 - 353
Target Start/End: Original strand, 22134871 - 22135217
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagcccc---------ctctatctctctcgcaaagttt-gctctgatacaaggtctatatttatagtgaaa-tata 103  Q
    |||||||||||||||||||||||||||||||         |||| |||||||| |||||||| ||| |||||||||||||||||||||||| ||| ||||    
T  22134871 tgttgcctttctaaacccttgtttcagcccctctatctctctctctctctctctcaaagtttagct-tgatacaaggtctatatttatagtaaaagtata 22134969  T
Q  104 actcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaa 203  Q
    ||||||||||||||||| |||| ||||||||||||||||||         ||||||||||||||||||||||| || |||||||||||||||||||||||    
T  22134970 actcataaatttggaacaaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgaatcaaaaatataatattccctttcaa 22135067  T
Q  204 aatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttat 303  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||    
T  22135068 aatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttat 22135167  T
Q  304 atttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||    
T  22135168 atttttagcaacaatattctccatccatcaaattttgagtcatactacaa 22135217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 23 - 387
Target Start/End: Complemental strand, 5101066 - 5100711
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacg 121  Q
    ||||||||| ||||||||| ||||||||||||      || |||| | ||||| ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  5101066 ttctaaacctttgtttcagtcccctctatctc------aaggtttaccctgattcaaggtctatatttatagtaaaagtataactcataaatttggaacg 5100973  T
Q  122 aatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 221  Q
    |||| || | |||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5100972 aataccagattgaagatacgttt----tttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 5100877  T
Q  222 cgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatatt 321  Q
    ||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||        ||||||||||||||||||||||||||    
T  5100876 cgttcttcatacggtacaaaaatatatttgttgtccataaatatattttcagcacaaaatatatttaaaacaaatcttttatatttttagcaacaatatt 5100777  T
Q  322 cttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatg 387  Q
    || | ||||||||||||||||||||||||||| |||||| |||||||||| ||||||| |||||||    
T  5100776 ctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattagcgatgatg 5100711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 15 - 353
Target Start/End: Original strand, 44600094 - 44600426
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    |||||| |||||||||||||||||||||||||||||||||      |||||||||| | |||||||||||||||||||||| ||| ||||||||||||||    
T  44600094 tgttgcttttctaaacccttgtttcagccccctctatctc------aaagtttgctttaatacaaggtctatatttatagtaaaagtataactcataaat 44600187  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||| ||| |||| |||||||||||| |||||         |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  44600188 ttgaaacaaataccacactgaagattcgttt-tttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattcccttttaaaatatatttg 44600286  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||       ||||||||||||||||||    
T  44600287 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagca 44600386  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||| | |||||||| ||||||||||||||||||    
T  44600387 acaatattctccatccatcaatttttgagtcatactacaa 44600426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 23 - 353
Target Start/End: Complemental strand, 56030513 - 56030191
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacg 121  Q
    ||||||||||||||||||||||| ||||||||      || |||| ||||||||||| | ||||||||||||| ||| |||||||||||||||||||| |    
T  56030513 ttctaaacccttgtttcagccccttctatctc------aaggtttactctgatacaaagcctatatttatagtaaaaatataactcataaatttggaaag 56030420  T
Q  122 aatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 221  Q
    |||| ||||| |||||||| |||         |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  56030419 aataccacaccgaagatactttt---ttttttctccttcagtgaaagaatatttgcaccaaaaatataatattccctttcaaaatatatttgcatcaaat 56030323  T
Q  222 cgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatatt 321  Q
    ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||||||||||    
T  56030322 cgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatatt 56030223  T
Q  322 cttcttccatcaaattttgagtcatactacaa 353  Q
    || | |||||||||||||||||||||||||||    
T  56030222 ctccatccatcaaattttgagtcatactacaa 56030191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 72 - 339
Target Start/End: Complemental strand, 30136596 - 30136331
Alignment:
Q  72 tgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaat 171  Q
    |||||| |||| ||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||         |||||||| |||||||||    
T  30136596 tgatactaggtatatatttatagagaaatataactaataaatttagaacgaatatcacactgaagatacgttt--tttttttctccttcaatgaaagaat 30136499  T
Q  172 atttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttc 271  Q
    ||||| || ||||||||||||||| |||| ||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||    
T  30136498 atttgaatcaaaaatataatattctcttttaaaatatatttgcatcaaatcgttcttcatacagtacaaaaatatatttattgtccataaatatattttc 30136399  T
Q  272 agcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaatttt 339  Q
    ||||||| |||| ||||       |||||||||||||||||||||||||||| | | |||||||||||    
T  30136398 agcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccattcatcaaatttt 30136331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 23 - 248
Target Start/End: Complemental strand, 19322766 - 19322547
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaatataactcataaatttggaacga 122  Q
    |||||||||||||||||| |||||||||||||      || |||| |||||||||||| |||||||||||||   |||||||||||||||||||||| ||    
T  19322766 ttctaaacccttgtttcatccccctctatctc------aaggtttactctgatacaagatctatatttatagatgaatataactcataaatttggaatga 19322673  T
Q  123 atatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatc 222  Q
    |||||||| ||||||||| ||||        |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19322672 atatcacattgaagatacatttcttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatc 19322573  T
Q  223 gtccttcatacgatacaaaaatatat 248  Q
    |||||| ||||  |||||||||||||    
T  19322572 gtcctttatacagtacaaaaatatat 19322547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 15 - 224
Target Start/End: Complemental strand, 53405207 - 53405001
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||||||||||||||||||||||||||| ||||||||||||  |||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  53405207 tgttgcctttctaaacccttgtttcagcccc-tctatctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 53405111  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| ||||||||| ||||||||         |||||| ||||||||||||||||||| ||||||||||| || ||||||||||||||||||    
T  53405110 ttggaacaaataccacactgaaaatacgttt-ttttttttctcctttagtgaaagaatatttgcatcaaaaatataatttttcctttcaaaatatatttg 53405012  T
Q  214 catcaaatcgt 224  Q
    |||||||||||    
T  53405011 catcaaatcgt 53405001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 205 - 353
Target Start/End: Original strand, 47211158 - 47211306
Alignment:
Q  205 atatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttata 304  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||       |||||||||    
T  47211158 atatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttgagcacaaaatatatttgaaacaaatcttttata 47211257  T
Q  305 tttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    ||||||||||||||||||| | ||||||||||||| |||||||||||||    
T  47211258 tttttagcaacaatattctccatccatcaaattttaagtcatactacaa 47211306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 70 - 353
Target Start/End: Complemental strand, 10112899 - 10112628
Alignment:
Q  70 tctgatacaaggtctatatttatagtgaaa--tataactcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaa 167  Q
    |||||||||| |||||||||||||   |||  |||||||||||||||||||||| || |||| |||||||||| |||         |||||| |||||||    
T  10112899 tctgatacaatgtctatatttataaaaaaaaatataactcataaatttggaacggatttcacgctgaagatacattt--tttttttctcctttagtgaaa 10112802  T
Q  168 gaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatat 267  Q
     ||||||||||| |||       ||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||     
T  10112801 taatatttgcatcaaa-------tattctctttcaaa-tatatttacatcaaatcttccttcatacgatacaaaaatatatttattgtccataaatatag 10112710  T
Q  268 tttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||||||||| ||||        ||||||||||||||||||||||||||||| | || |||||||| |||||||||||||    
T  10112709 tttcagcacaaaatatatttgaaac----cttttatatttttagcaacaatattcttcattcaacaaattttaagtcatactacaa 10112628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 114 - 353
Target Start/End: Original strand, 38890478 - 38890699
Alignment:
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatatt-ccctttcaaaatatattt 212  Q
    ||||||||||||||||| ||||||||| ||||        |||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  38890478 ttggaacgaatatcacattgaagatacatttcttttttt-ctcctttagtgaaagaatatttgcatcaaaaatataatatttccctttcaaaatatattt 38890576  T
Q  213 gcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagc 312  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |  |||||                |||||||||||||||||    
T  38890577 gcatcaaatcgtccttcatacaatacaaaaatatatttattgtccataaatatatttgaa--acaaa----------------tcttttatatttttagc 38890658  T
Q  313 aacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    ||||||||||| | |||||||||||||||||||| ||||||    
T  38890659 aacaatattctccatccatcaaattttgagtcatgctacaa 38890699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 47210996 - 47211160
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  47210996 tgttgcctttctaaacccttgtttcagccccctctatctccctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 47211095  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcata 180  Q
    ||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||||    
T  47211096 ttggaacaaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcata 47211160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 70 - 353
Target Start/End: Complemental strand, 9022335 - 9022062
Alignment:
Q  70 tctgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaaga 169  Q
    ||||||||||||| ||||||||||| |||||||||| ||||||||||||| | |||||||  ||||||||| |||          ||||| |||||||||    
T  9022335 tctgatacaaggtttatatttatagagaaatataacacataaatttggaatggatatcacgttgaagatacatttttttttat--tcctttagtgaaaga 9022238  T
Q  170 atatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattt 269  Q
    |||||||||| |||       |||||||||| ||||||||||||||||||||| | ||||||||| || ||||||||||||||||| |||||||||||||    
T  9022237 atatttgcatcaaa-------tattcccttttaaaatatatttgcatcaaatctttcttcatacggtagaaaaatatatttattgt-cataaatatattt 9022146  T
Q  270 tcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||| ||||||| ||||       || |||||||||| | ||||||||||  || ||||| ||||||||| |||||||||||    
T  9022145 tcagcaaaaaatatatttgaaacaaatcatttatattttcaacaacaatatttctcatccataaaattttgaatcatactacaa 9022062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 144
Target Start/End: Original strand, 18709419 - 18709551
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctcta--tctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataa 111  Q
    ||||||||||||||||||||||||||||||||||||  |||||||| ||||||||   || |||||||||||||||||||||| ||| ||||||||||||    
T  18709419 tgttgcctttctaaacccttgtttcagccccctctatctctctctctcaaagtttagcctaatacaaggtctatatttatagtaaaagtataactcataa 18709518  T
Q  112 atttggaacgaatatcacactgaagatacgttt 144  Q
    ||||||||| |||| ||||||||||||||||||    
T  18709519 atttggaacaaataccacactgaagatacgttt 18709551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 201 - 353
Target Start/End: Complemental strand, 9863650 - 9863501
Alignment:
Q  201 caaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttt 300  Q
    |||||||||||||||||||||| |||||||| |   ||||||||||||||||||| |||||||||||||| |||||||||||| ||||       || ||    
T  9863650 caaaatatatttgcatcaaatcttccttcatgc---acaaaaatatatttattgttcataaatatatttttagcacaaaatatgtttgaaacaaatcatt 9863554  T
Q  301 tatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    ||||||||||| ||||||||  ||| |||| |||||||||||||||| |||||    
T  9863553 tatatttttagtaacaatatatttcatccaacaaattttgagtcatattacaa 9863501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 8631675 - 8631757
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||| |||||||||||||||||||    
T  8631675 tgttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttgctttgatacaaagtctatatttatagtgaaa 8631757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 38409282 - 38409202
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||| |||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  38409282 tgttgcctttttaaaccattgtttcagccccctctatctccctctcaaagtttgctctgatacaaggtctatatttatagt 38409202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 72 - 275
Target Start/End: Original strand, 54928982 - 54929180
Alignment:
Q  72 tgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnc-tccttcagtgaaaga- 169  Q
    ||||||||||| |||| |||||| |||||||||||| |||||||| |||||||||||| |||||||| ||||||        | || |||||   || |     
T  54928982 tgatacaaggtttatagttatagagaaatataactcgtaaatttgaaacgaatatcacgctgaagatgcgtttcctttttttcctcattcagcataaaat 54929081  T
Q  170 atatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattt 269  Q
    |||||||||| |||       ||||||  || ||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  54929082 atatttgcatcaaa-------tattcctattaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatattttttgtccataaatatattt 54929174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 5637721 - 5637799
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||    
T  5637721 tgttgcctttctaaactcttgtttcagccccctctatctctct--caaagtttgctcttatacaaggtctatatttatagt 5637799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 5198497 - 5198423
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||    
T  5198497 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatttatagt 5198423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 6764916 - 6764838
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    ||||||||||||||||||||||||||||||| ||||||||      |||||||||||||||||||||||||||||||||||||||    
T  6764916 tgttgcctttctaaacccttgtttcagccccttctatctc------aaagtttgctctgatacaaggtctatatttatagtgaaa 6764838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 24888873 - 24888799
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||    
T  24888873 tgttgcctttctaaacccttgtttcagccccctctatctct------aagtttgctctgatacaaggtctatatttatagt 24888799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 40637151 - 40637073
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    |||||||||||||||||||||||||||||||||||||||      | ||||||||||||||||||||||||||||||||||||||    
T  40637151 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggtctatatttatagtgaaa 40637073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 7941398 - 7941322
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||||| ||    |||||||||||||||| |||||||||||||||    
T  7941398 tgttgcctttctaaacccttgtttcagccccctctatctctcccg----gtttgctctgatacaacgtctatatttatagt 7941322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 9148330 - 9148254
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||||||||||||||| |||||||||||||||||||    |||||||||||||||||||||| |||||||||||||    
T  9148330 tgttgcctttctaaacccttgcttcagccccctctatctct----caaagtttgctctgatacaaggcctatatttatagt 9148254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 196 - 275
Target Start/End: Complemental strand, 10979755 - 10979676
Alignment:
Q  196 cctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 275  Q
    ||||| ||||||||||||||||||||| ||||||||||   |||||||||||||| ||||||||||||||||||||||||    
T  10979755 cctttaaaaatatatttgcatcaaatcttccttcatacagcacaaaaatatatttgttgtccataaatatattttcagca 10979676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 11006493 - 11006571
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||   |  ||||||||||||||||||||||||||    
T  11006493 tgttgcctttctaaacccttgtttcagccccctctatctctctctcaaa--atagtctgatacaaggtctatatttatagt 11006571  T

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Target: chr4; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 11435032 - 11434958
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      | ||||||||||||||||||||||||||||||||||    
T  11435032 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggtctatatttatagt 11434958  T

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Target: chr4; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 11008822 - 11008900
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||  | || |||||||||||||||||||||||||    
T  11008822 tgttgcctttctaaacccttgtttcagccccctctatctctctctcaaa-atagc-ctgatacaaggtctatatttatagt 11008900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 36919841 - 36919917
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||||||||||||||||||||||||||| ||||| |    |||||||| |||||||||||||||||||||||||||    
T  36919841 tgttgcctttctaaacccttgtttcagccccctatatctat----caaagtttactctgatacaaggtctatatttatagt 36919917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 37089627 - 37089704
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||| ||||||||||||||||||||||||||||||||||||   ||||||   |||||||||||||||||||||||||    
T  37089627 tgttgccattctaaacccttgtttcagccccctctatctctctc---aagtttagcctgatacaaggtctatatttatagt 37089704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 296 - 353
Target Start/End: Original strand, 14789512 - 14789569
Alignment:
Q  296 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  14789512 tcttttatatttttagcaacattattcttcatccatcaaattttgagtcatactacaa 14789569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 22044646 - 22044720
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      | |||||||||||||||||||| |||||||||||||    
T  22044646 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggcctatatttatagt 22044720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 22802990 - 22803064
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||| |||||||||||||||||||||||||||||||      |||||||| |||||||||||||||||||||||||||    
T  22802990 tgttgccattctaaacccttgtttcagccccctctatct------caaagtttactctgatacaaggtctatatttatagt 22803064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 47274804 - 47274730
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||  ||||||||||||||||||||||||||    
T  47274804 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttagtctgatacaaggtctatatttatagt 47274730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 47868478 - 47868400
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    |||||||||||||||||||| ||||||||| |||||||||       ||||||||||||||||||||||||||||||||||||||    
T  47868478 tgttgcctttctaaacccttctttcagccctctctatctcc------aagtttgctctgatacaaggtctatatttatagtgaaa 47868400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 48486396 - 48486322
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||| |||||||||||||||||||||||||||||||      |||||||| |||||||||||||||||||||||||||    
T  48486396 tgttgccattctaaacccttgtttcagccccctctatct------caaagtttactctgatacaaggtctatatttatagt 48486322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 51015323 - 51015249
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      | |||||||||||||||||| |||||||||||||||    
T  51015323 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaagtctatatttatagt 51015249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 2485128 - 2485207
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    |||||||||||||||||||||||| ||||||||     |||  | ||||||||||||||||||||||||||||||||||||||||    
T  2485128 tgttgcctttctaaacccttgttttagccccct-----tctagctcaaagtttgctctgatacaaggtctatatttatagtgaaa 2485207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 619703 - 619777
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||| |||| ||||||||||||||||||||||||||||      |||||||| |||||||||||||||||||||||||||    
T  619703 tgttgtctttataaacccttgtttcagccccctctatct------caaagtttactctgatacaaggtctatatttatagt 619777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 9174402 - 9174476
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||| ||||||||||||||||||||||||||||||||      | ||||||||| ||||||||||||||||||||||||    
T  9174402 tgttgcttttctaaacccttgtttcagccccctctatct------ccaagtttgctttgatacaaggtctatatttatagt 9174476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 9176730 - 9176804
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||| ||||||||||||||||||||||||||||||||      | ||||||||| ||||||||||||||||||||||||    
T  9176730 tgttgcttttctaaacccttgtttcagccccctctatct------ccaagtttgctttgatacaaggtctatatttatagt 9176804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 16934399 - 16934473
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||| ||||||||||||||| ||||||||||||||||      ||||||||||| ||||||||||||||||||||||||    
T  16934399 tgttgcttttctaaacccttgtatcagccccctctatct------caaagtttgctttgatacaaggtctatatttatagt 16934473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 18847230 - 18847156
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||| ||||||||||||      ||||||||| | ||||||||||||||||||||||||    
T  18847230 tgttgcctttctaaacccttgtttcaaccccctctatct------caaagtttgttttgatacaaggtctatatttatagt 18847156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 22046941 - 22047015
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      | |||||||||| ||||||||| |||||||||||||    
T  22046941 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctccgatacaaggcctatatttatagt 22047015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 22801126 - 22801192
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||      |||||||| |||||||||||||||||||||||||||    
T  22801126 ttctaaacccttgtttcagccccctctatct------caaagtttactctgatacaaggtctatatttatagt 22801192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 40091671 - 40091745
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||| |||||||||||||||||||||||||||||||||      |||||||| || ||||||||||||||||||||||||    
T  40091671 tgttgtctttctaaacccttgtttcagccccctctatct------caaagtttactttgatacaaggtctatatttatagt 40091745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 24446828 - 24446909
Alignment:
Q  8 ccctagctgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||| |||||||||||||||||||||||||||||||||||||||      ||| |||| | ||||||||| |||||||||||||||    
T  24446828 ccctagttgttgcctttctaaacccttgtttcagccccctctatct------caaggtttacactgatacaatgtctatatttatagt 24446909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 36921750 - 36921822
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttat 92  Q
    |||||||||||||| ||||||||||| |||||||||||||||    ||||||| ||||||||||||||||||||||||    
T  36921750 tgttgcctttctaagcccttgtttca-ccccctctatctctc----aaagtttactctgatacaaggtctatatttat 36921822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 254 - 353
Target Start/End: Complemental strand, 19322510 - 19322410
Alignment:
Q  254 gtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaa-tattcttcttccatcaaattttgagtcatactaca 352  Q
    |||||||||||||||||||| | ||||||| |||        ||||||||||||||||||| || |||||| | ||||||||||||||||||||||||||    
T  19322510 gtccataaatatattttcagtataaaatatatttaaaacaaatcttttatatttttagcaaaaaatattctccatccatcaaattttgagtcatactaca 19322411  T
Q  353 a 353  Q
    |    
T  19322410 a 19322410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 345
Target Start/End: Original strand, 38209098 - 38209259
Alignment:
Q  189 aatattccctttcaaa-atatatttgcatcaaatcgtccttcatacgatacaaaaatatatt--tattgtc--cataaatatattttcagcacaaaatat 283  Q
    |||||||| ||||||| |||||||||||||||||| ||||||||||  ||||||||||||||  |||| ||  ||  ||| |  ||  ||||||||||||    
T  38209098 aatattccttttcaaatatatatttgcatcaaatcttccttcatacagtacaaaaatatatttatattttcaacaacaatcttcttgaagcacaaaatat 38209197  T
Q  284 ctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 345  Q
     |||        ||||||||||||||| |||||||||| ||| |||||||||||||||||||    
T  38209198 atttaaaacaaatcttttatatttttaacaacaatatttttcatccatcaaattttgagtca 38209259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 14633396 - 14633319
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    ||||||||||||||||| ||||||||||||  ||||||||      ||||||| |||||||||||||||||||||||||||||||    
T  14633396 tgttgcctttctaaacctttgtttcagccct-tctatctc------aaagtttactctgatacaaggtctatatttatagtgaaa 14633319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 16932045 - 16932119
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||| ||||||||||||||| ||||||||||||||||      ||||||||||| ||||||||||| ||||||||||||    
T  16932045 tgttgcttttctaaacccttgtatcagccccctctatct------caaagtttgctttgatacaaggtttatatttatagt 16932119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 16453386 - 16453313
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatag 94  Q
    |||||||||| |||||||||||||||||||||||||||||||       |||||||||||||||| | ||||||||||||    
T  16453386 tgttgcctttttaaacccttgtttcagccccctctatctctcg------gtttgctctgatacaaagcctatatttatag 16453313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 31849855 - 31849929
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||| ||     ||||||||||||||||||  |||||||| ||||    
T  31849855 tgttgcctttctaaacccttgtttcagccccctctatctc-ct-----agtttgctctgatacaagacctatatttctagt 31849929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 213 - 272
Target Start/End: Original strand, 29609838 - 29609897
Alignment:
Q  213 gcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttca 272  Q
    |||||||||| ||||||||||| |||||||||||||||| | | ||||||||||||||||    
T  29609838 gcatcaaatcttccttcatacggtacaaaaatatatttactcttcataaatatattttca 29609897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 37313322 - 37313361
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37313322 tgttgcctttctaaacccttgtttcagccccctctatctc 37313361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 2891394 - 2891356
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatct 53  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2891394 tgttgcctttctaaacccttgtttcagccccctctatct 2891356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 13544020 - 13543957
Alignment:
Q  31 ccttgtttcagccccctctatctctctcgcaaagtttgc-tctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||  |||||||| | ||||||||||| ||||||||||||||    
T  13544020 ccttgtttcagccccctctatctctct--caaagtttacatctgatacaagatctatatttatagt 13543957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 24879066 - 24878992
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||| ||||||||||||| |||||||||||||||||||      | |||||| ||| |||||||||||||||||||||||    
T  24879066 tgttgtctttctaaaccctagtttcagccccctctatct------ccaagtttactcggatacaaggtctatatttatagt 24878992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 36378369 - 36378295
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||||||||||||||||||||||||| |||||||      ||| ||||  |||||||||| |||||||||||||||    
T  36378369 tgttgcctttctaaacccttgtttcagccccgtctatct------caaggtttattctgatacaaagtctatatttatagt 36378295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 52942702 - 52942781
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctg--atacaaggtctatatttatagtgaaa 99  Q
    ||||||||||||||||||||||||||| |||||||||||      ||||||||  ||||  ||||||||||||||||||||||||||    
T  52942702 tgttgcctttctaaacccttgtttcag-cccctctatct------caaagtttagtctgatatacaaggtctatatttatagtgaaa 52942781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 3824826 - 3824903
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaag-tttgctctgatacaaggtctatatttatagt 95  Q
    |||||| ||||||||||  ||||||||||||||||||||||||  |||||   | |||||||||||||||||||||||||||    
T  3824826 tgttgcttttctaaacc--tgtttcagccccctctatctctct--caaagaaatactctgatacaaggtctatatttatagt 3824903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 3937465 - 3937504
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  3937465 tgttgcctttctaaacccttgtttcagctccctctatctc 3937504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 5516701 - 5516752
Alignment:
Q  224 tccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 275  Q
    |||||||||||||| ||||||||||||||| || ||||||||||||| ||||    
T  5516701 tccttcatacgataaaaaaatatatttattatctataaatatatttttagca 5516752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 22780629 - 22780672
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctc 58  Q
    |||||| ||||||||||| |||||||||||||||||||||||||    
T  22780629 tgttgcttttctaaacccctgtttcagccccctctatctctctc 22780672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 22782994 - 22783037
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctc 58  Q
    |||||| ||||||||||| |||||||||||||||||||||||||    
T  22782994 tgttgcttttctaaacccctgtttcagccccctctatctctctc 22783037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 33415743 - 33415782
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  33415743 tgttacctttctaaacccttgtttcagccccctctatctc 33415782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 38928434 - 38928473
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  38928434 tgttgcctttctaaactcttgtttcagccccctctatctc 38928473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 25357713 - 25357640
Alignment:
Q  22 tttctaaacccttgttt-cagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||||||||||| ||||||| |||  ||||||| ||| |||| || ||||||||||||||||||||||||    
T  25357713 tttctaaacccttgttttcagcccc-tctcactctctctcaaggtttactttgatacaaggtctatatttatagt 25357640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 19095951 - 19095885
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||      ||| |||| | ||||||||| |||||||||||||||    
T  19095951 ttctaaacccttgtttcagccccctctatct------caaggtttacactgatacaatgtctatatttatagt 19095885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 38270242 - 38270316
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||||||||||||||||||||||| | |||||||      ||| |||| | ||||||||| |||||||||||||||    
T  38270242 tgttgcctttctaaacccttgtttcagcctcttctatct------caaggtttacactgatacaatgtctatatttatagt 38270316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 106
Target Start/End: Complemental strand, 9863736 - 9863700
Alignment:
Q  70 tctgatacaaggtctatatttatagtgaaatataact 106  Q
    ||||||||||||||||||||||||| |||||||||||    
T  9863736 tctgatacaaggtctatatttatagagaaatataact 9863700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 144
Target Start/End: Original strand, 29609767 - 29609823
Alignment:
Q  85 atatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgttt 144  Q
    |||||||||| ||||||  |||||||||||||||||||||||||| ||| ||||||||||    
T  29609767 atatttatagagaaata--actcataaatttggaacgaatatcacgctg-agatacgttt 29609823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 12396101 - 12396140
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||| ||||||||||||||| ||||||||    
T  12396101 tgttgcctttctaaatccttgtttcagccccatctatctc 12396140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 12401063 - 12401102
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||| ||||||||||||||| ||||||||    
T  12401063 tgttgcctttctaaatccttgtttcagccccatctatctc 12401102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 275
Target Start/End: Original strand, 14647175 - 14647214
Alignment:
Q  236 tacaaaaatatatttattgtccataaatatattttcagca 275  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  14647175 tacaaaaatatatttgttgtccatgaatatattttcagca 14647214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 341
Target Start/End: Original strand, 29609948 - 29609983
Alignment:
Q  306 ttttagcaacaatattcttcttccatcaaattttga 341  Q
    |||||||||||||||||||| |||||||||||||||    
T  29609948 ttttagcaacaatattcttcatccatcaaattttga 29609983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 32274204 - 32274271
Alignment:
Q  73 gatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatac 140  Q
    |||||||| ||| ||||||||   ||||||||||| |||| |||||||| |||||||||| |||||||    
T  32274204 gatacaagatctgtatttatataaaaatataactcgtaaacttggaacggatatcacactaaagatac 32274271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 38208986 - 38209044
Alignment:
Q  70 tctgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatca 128  Q
    |||||||||| || ||||||||||  |||||||||||||||||| ||||| | ||||||    
T  38208986 tctgatacaaagtttatatttataaagaaatataactcataaatctggaatggatatca 38209044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 345
Target Start/End: Original strand, 54929220 - 54929267
Alignment:
Q  296 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 345  Q
    |||||||||||||||||||||||||| |  |||||||||||||| |||||    
T  54929220 tcttttatatttttagcaacaatattat--ttccatcaaattttaagtca 54929267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 387
Target Start/End: Complemental strand, 16455074 - 16455017
Alignment:
Q  331 tcaaattttgagtca-tactacaaaattctcaaccttgactccaaattagtgatgatg 387  Q
    |||||| |||||||| | |||||| | |||| ||||||||||||||||||||||||||    
T  16455074 tcaaatattgagtcacttctacaacaatctccaccttgactccaaattagtgatgatg 16455017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 16455356 - 16455323
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctc 56  Q
    ||||||||||||||||||||||||| ||||||||    
T  16455356 ttctaaacccttgtttcagccccctttatctctc 16455323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 5516793 - 5516833
Alignment:
Q  299 tttatatttttagcaacaatattcttcttccatcaaatttt 339  Q
    ||||||||||||||||||||||||| | | |||||||||||    
T  5516793 tttatatttttagcaacaatattctccattcatcaaatttt 5516833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 43
Target Start/End: Original strand, 18409603 - 18409631
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagcc 43  Q
    |||||||||||||||||||||||||||||    
T  18409603 tgttgcctttctaaacccttgtttcagcc 18409631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 230; Significance: 1e-127; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 15 - 353
Target Start/End: Complemental strand, 608813 - 608472
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc--aaagtttgctctgatacaaggtctatatttatagtgaaatataactcataaa 112  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |  |||||||||| ||||| |||||||||||||| ||||||||||||||||||||    
T  608813 tgttgcatttctaaacccttgtttcagccccctctatctctctctctcaaagtttgctatgatataaggtctatatttacagtgaaatataactcataaa 608714  T
Q  113 tttggaacgaatatcacactgaagatacgtt-tcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatt 211  Q
    |||||||| |||||||||| ||||||||||| |         |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  608713 tttggaacaaatatcacaccgaagatacgttcttttttttttctccttcagtgaaagaatatttgcataaaatatataatattctctttcaaaatatatt 608614  T
Q  212 tgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttag 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||    
T  608613 tgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttag 608514  T
Q  312 caacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  608513 caacaatattcttcttccatcaaattttgagtgatactacaa 608472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 15 - 353
Target Start/End: Complemental strand, 43530207 - 43529873
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    |||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  43530207 tgttgcttttctaaacccttgtttcagccccctctatctctctc--aaagtttgctctgatacaaggtctatatttatagtaaaagtataactcataaat 43530110  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||  |||| |||||||||||||| |||         ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43530109 ttggaataaataccacactgaagatactttt---ttttttctccttcagtgaaagaatattagcataaaaaatataatattccctttcaaaatatatttg 43530013  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  43530012 catcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 43529913  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  43529912 acaatattctccatccatcaaattttgagtcatactacaa 43529873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 15 - 353
Target Start/End: Original strand, 28283475 - 28283811
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  28283475 tgttgccattctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 28283574  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| ||||| |||||||||||||||||         |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  28283575 ttggaacaaatattacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattcactttcaaaatatatttg 28283671  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  28283672 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 28283771  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    | |||||||| | |||||||||||||||||||||||||||    
T  28283772 aaaatattctccatccatcaaattttgagtcatactacaa 28283811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 15 - 350
Target Start/End: Complemental strand, 15809298 - 15808967
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||||||||||||||||||||||||||||| ||||||||||  |||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  15809298 tgttgcctttctaaacccttgtttcagccccctttatctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 15809201  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15809200 ttggaacaaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 15809104  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||       ||||||||||||||||||    
T  15809103 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcaacacaaaatatatttgaaacaaatcttttatatttttagca 15809004  T
Q  314 acaatattcttcttccatcaaattttgagtcatacta 350  Q
    |||||||||| | ||||||||||||||||||||||||    
T  15809003 acaatattctccatccatcaaattttgagtcatacta 15808967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 15 - 353
Target Start/End: Complemental strand, 3874089 - 3873752
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||| |||||||||||||||||||||||||| |||||||||||  |||||||   ||||||||| ||||||||||||||| ||| ||||||||||||||    
T  3874089 tgttgtctttctaaacccttgtttcagcccccgctatctctctc--aaagtttagcctgatacaaagtctatatttatagtaaaagtataactcataaat 3873992  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| ||||| ||||||| ||||         |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  3873991 ttggaacaaataccacaccgaagatatgttt-ttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttg 3873893  T
Q  214 catcaaatcg-tccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagc 312  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||||    
T  3873892 catcaaatcgtttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagc 3873793  T
Q  313 aacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  3873792 aacaatattctccatccatcaaattttgagtcatactacaa 3873752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 23 - 389
Target Start/End: Complemental strand, 41384815 - 41384459
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacg 121  Q
    ||||||||||||||||||||||| ||||||||      ||  ||| || |||| ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  41384815 ttctaaacccttgtttcagcccc-tctatctc------aatttttactttgattcaaggtctatatttatagtaaaagtataactcataaatttggaacg 41384723  T
Q  122 aatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 221  Q
    |||| ||||||||||||||||||          ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  41384722 aataccacactgaagatacgtttttttttt---tccttcaatgaaagaatatttgcataaaaa-tataatattccctttcaaaatatatttgcatcaaat 41384627  T
Q  222 cgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatatt 321  Q
    ||| ||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| || |       ||||||||||||||||||||||||||    
T  41384626 cgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagtataaaatatattcgaaacaaatcttttatatttttagcaacaatatt 41384527  T
Q  322 cttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatgtc 389  Q
    || | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||    
T  41384526 ctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattagtgatgatgtc 41384459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 23 - 353
Target Start/End: Complemental strand, 41382744 - 41382421
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacg 121  Q
    |||||||||||||||| |||||| ||||||||      || |||| ||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  41382744 ttctaaacccttgttttagccccatctatctc------aaggtttactctgattcaaggtctatatttatagtaaaagtataactcataaatttggaacg 41382651  T
Q  122 aatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 221  Q
    |||| ||||||||||||||||||         ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  41382650 aataccacactgaagatacgttt--tttttttctcattcagtgaaagaatatttgcataaaaaatataatatttcctttcaaaatatatttgcatcaaat 41382553  T
Q  222 cgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatatt 321  Q
    |||  |||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| || |       ||||||||||||||| ||||||||||    
T  41382552 cgttgttcatacggtacaaaaatatatttattgtccataaatatattttcagtataaaatatattcgaaacaaatcttttatatttttaacaacaatatt 41382453  T
Q  322 cttcttccatcaaattttgagtcatactacaa 353  Q
    || | |||||||||||||||||||||||||||    
T  41382452 ctccatccatcaaattttgagtcatactacaa 41382421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 197 - 353
Target Start/End: Complemental strand, 32339252 - 32339096
Alignment:
Q  197 ctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnnt 296  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       |    
T  32339252 ctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaat 32339153  T
Q  297 cttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  32339152 cttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 32339096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 15 - 204
Target Start/End: Complemental strand, 181616 - 181434
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||| |||||| |||||||||||||||||||||||||      |||||||  |||||||||| ||||||||||||||| ||| ||||||||||||||    
T  181616 tgttgccattctaagcccttgtttcagccccctctatctc------aaagtttagtctgatacaaagtctatatttatagtaaaagtataactcataaat 181523  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaa 204  Q
    |||||||||||| ||||||||||||||||||         |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  181522 ttggaacgaataccacactgaagatacgttt--ttttcttctcctttagtgaaagaatatttgcatcaaaaatataatattccctttcaaa 181434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 15 - 144
Target Start/End: Original strand, 24873437 - 24873567
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  24873437 tgttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 24873536  T
Q  114 ttggaacgaatatcacactgaagatacgttt 144  Q
    ||||||| ||||  |||||||||||||||||    
T  24873537 ttggaacaaatacaacactgaagatacgttt 24873567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 32339388 - 32339260
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  32339388 tgttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 32339291  T
Q  114 ttggaacgaatatcacactgaagatacgttt 144  Q
    ||||||| |||| ||||||||||||||||||    
T  32339290 ttggaacaaataccacactgaagatacgttt 32339260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 238 - 353
Target Start/End: Original strand, 3265635 - 3265750
Alignment:
Q  238 caaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaatt 337  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||    
T  3265635 caaacatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatt 3265734  T
Q  338 ttgagtcatactacaa 353  Q
    ||||||||||||||||    
T  3265735 ttgagtcatactacaa 3265750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 22684912 - 22685000
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc----aaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    ||||| ||||||||||||||||||||||| |||||||||||||| |    |||||||||||||||||||||||||||||||||||||||    
T  22684912 tgttgtctttctaaacccttgtttcagcctcctctatctctctctctctcaaagtttgctctgatacaaggtctatatttatagtgaaa 22685000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 14807830 - 14807756
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||    
T  14807830 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatttatagt 14807756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 12517280 - 12517356
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||| ||||| ||||||    
T  12517280 tgttgcctttctaaacccttgtttcagccccctctatctct----caaagtttgctctgatacaaggtatatatatatagt 12517356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 3886174 - 3886248
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||| |||||||||||||||    
T  3886174 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaagtctatatttatagt 3886248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 4424097 - 4424023
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||||||||| |||||||||||||||||||||||      ||||||||||||||||||||||||| ||||||||||    
T  4424097 tgttgcctttctaaatccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctgtatttatagt 4424023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 15072789 - 15072715
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||  ||||||||||||||||||||||||||    
T  15072789 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttagtctgatacaaggtctatatttatagt 15072715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 18810787 - 18810713
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      | ||||||||||||||||||| ||||||||||||||    
T  18810787 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaagatctatatttatagt 18810713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 27827065 - 27826991
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      | |||||||||||||||||||| |||||||||||||    
T  27827065 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggcctatatttatagt 27826991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 27829376 - 27829302
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      | |||||||||||||||||||| |||||||||||||    
T  27829376 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggcctatatttatagt 27829302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 44720922 - 44720848
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||| ||||| ||||||||||||||||||    
T  44720922 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctttgatataaggtctatatttatagt 44720848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 14419447 - 14419541
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    |||||||||||||||||||||||||||||||||||||||      ||| |||| | ||||||||| ||||||||||||||| ||| ||| ||||||||||    
T  14419447 tgttgcctttctaaacccttgtttcagccccctctatct------caaggtttacactgatacaatgtctatatttatagtaaaagtatcactcataaat 14419540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 18812972 - 18812898
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||||||||||||||||||||||| |||||||||      | ||||||||||||||||||| ||||||||||||||    
T  18812972 tgttgcctttctaaacccttgtttcagcctcctctatct------ccaagtttgctctgatacaagatctatatttatagt 18812898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 26775280 - 26775206
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      ||| |||||||||||||||| | |||||||||||||    
T  26775280 tgttgcctttctaaacccttgtttcagccccctctatct------caaggtttgctctgatacaaagcctatatttatagt 26775206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 189 - 275
Target Start/End: Original strand, 11701364 - 11701447
Alignment:
Q  189 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 275  Q
    |||||||||||| ||||||||||| |||||| || |||   ||||| |||||||||||||||| || ||||||||||||||||||||    
T  11701364 aatattccctttaaaaatatatttacatcaattcttcc---atacggtacaaaaatatatttactgaccataaatatattttcagca 11701447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 35872627 - 35872708
Alignment:
Q  8 ccctagctgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||| |||||||||||||||||||||||||||||||||||||||      ||| |||| | ||||||||| |||||||||||||||    
T  35872627 ccctagttgttgcctttctaaacccttgtttcagccccctctatct------caaggtttacactgatacaatgtctatatttatagt 35872708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 13858740 - 13858814
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||| ||||||||||||      ||| |||| ||||||||||| |||||||||||||||    
T  13858740 tgttgcctttctaaacccttgtttcatccccctctatct------caaggtttactctgatacaaagtctatatttatagt 13858814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 14477355 - 14477281
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||| ||||||||||||      ||| |||||||||||||||| | |||||||||||||    
T  14477355 tgttgcctttctaaacccttgtttcaaccccctctatct------caaggtttgctctgatacaaagcctatatttatagt 14477281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 33541644 - 33541718
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      ||| |||| | ||||||||| |||||||||||||||    
T  33541644 tgttgcctttctaaacccttgtttcagccccctctatct------caatgtttacactgatacaatgtctatatttatagt 33541718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 5622994 - 5623033
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5622994 tgttgcctttctaaacccttgtttcagccccctctatctc 5623033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 201 - 272
Target Start/End: Original strand, 13986214 - 13986285
Alignment:
Q  201 caaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttca 272  Q
    |||||||||||||||||||||| || ||||| || ||||||||| |||| | | ||||||||||||||||||    
T  13986214 caaaatatatttgcatcaaatcttctttcatgcggtacaaaaatttattaactatccataaatatattttca 13986285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 25952600 - 25952561
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25952600 tgttgcctttctaaacccttgtttcagccccctctatctc 25952561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 27107153 - 27107192
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27107153 tgttgcctttctaaacccttgtttcagccccctctatctc 27107192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 37214466 - 37214505
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37214466 tgttgcctttctaaacccttgtttcagccccctctatctc 37214505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 43082052 - 43082009
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctc 58  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  43082052 tgttgcttttctaaacccttgtttcagccccctctatctctctc 43082009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 36865617 - 36865579
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatct 53  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36865617 tgttgcctttctaaacccttgtttcagccccctctatct 36865579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 1225245 - 1225206
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  1225245 tgttgtctttctaaacccttgtttcagccccctctatctc 1225206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 15068060 - 15068021
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  15068060 tgttgcctttctaaacccttgtttcagccccttctatctc 15068021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 345
Target Start/End: Original strand, 13986328 - 13986374
Alignment:
Q  299 tttatatttttagcaacaatattcttcttccatcaaattttgagtca 345  Q
    |||||||||||||||||||| |||||| ||||| |||||||||||||    
T  13986328 tttatatttttagcaacaatcttcttcatccataaaattttgagtca 13986374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 345
Target Start/End: Original strand, 11701435 - 11701479
Alignment:
Q  301 tatatttttagcaacaatattcttcttccatcaaattttgagtca 345  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||    
T  11701435 tatattttcagcaacaatcttcttcgtccatcaaattttgagtca 11701479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 5372434 - 5372472
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  5372434 tgttgcctttctaaacccttgtttcag-cccctctatctc 5372472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 54
Target Start/End: Complemental strand, 27911086 - 27911055
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||    
T  27911086 ttctaaacccttgtttcagccccctctatctc 27911055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 54
Target Start/End: Complemental strand, 27957505 - 27957474
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||    
T  27957505 ttctaaacccttgtttcagccccctctatctc 27957474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 30480759 - 30480798
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||||||||||| |||| ||||||||    
T  30480759 tgttgcctttctaaacccttgtttcaaccccttctatctc 30480798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 43079681 - 43079639
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctc 58  Q
    |||||| ||||||||||||||||||||||||| |||||||||||    
T  43079681 tgttgcttttctaaacccttgtttcagccccc-ctatctctctc 43079639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 345
Target Start/End: Original strand, 30679208 - 30679256
Alignment:
Q  296 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 345  Q
    |||||| |||||||| ||||| |||||||| |||||||||||||||||||    
T  30679208 tcttttttatttttaccaaca-tattcttcatccatcaaattttgagtca 30679256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 21480586 - 21480554
Alignment:
Q  22 tttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||||||||| ||||||||    
T  21480586 tttctaaacccttgtttcagccccatctatctc 21480554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 230; Significance: 1e-127; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 15 - 387
Target Start/End: Complemental strand, 458287 - 457918
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||  || ||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  458287 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaggtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 458190  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  458189 ttggaacaaataccacactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 458092  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  458091 catcaaatcgttcttcatacgatacaaaaatatatttattgtccacaaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 457992  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatg 387  Q
    |||||||||  | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||| ||||||    
T  457991 acaatattccccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattagtaatgatg 457918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 15 - 353
Target Start/End: Complemental strand, 746760 - 746424
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  746760 tgttgcttttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 746661  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  746660 ttggaacaaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 746564  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  746563 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 746464  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  746463 acaatattctccatccatcaaattttgagtcatactacaa 746424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 15 - 353
Target Start/End: Original strand, 4104149 - 4104481
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  4104149 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 4104246  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| ||||||||   |||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4104247 ttggaacaaataccacactga---tacgttt--tttttttctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 4104341  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||       ||||||||||||||||||    
T  4104342 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcataaagtatatttgaaacaaatcttttatatttttagca 4104441  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4104442 acaatattcttcttccatcaaattttgagtcatactacaa 4104481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 15 - 353
Target Start/End: Complemental strand, 25533445 - 25533109
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc--aaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataa 111  Q
    |||||||||||||||||||||||||||||||||||||||||||| |  |||||||   ||||||||||||||||||||||||| ||| ||||||||||||    
T  25533445 tgttgcctttctaaacccttgtttcagccccctctatctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataa 25533346  T
Q  112 atttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatt 211  Q
    |||| |||| |||||||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25533345 atttagaacaaatatcacactgaagatacgttt-----ttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatt 25533251  T
Q  212 tgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttag 311  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       ||||||||||||||||    
T  25533250 tgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcaaaaaatatatttgaaacaaatcttttatatttttag 25533151  T
Q  312 caacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||||| | |||||||||||||||||||||||||||    
T  25533150 caacaatattctccatccatcaaattttgagtcatactacaa 25533109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 15 - 389
Target Start/End: Complemental strand, 42992289 - 42991919
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    |||||||||| ||||||||||||||||||||||||||||||||   |||||||    ||||||||||| |||||||||||| ||| ||||||||||||||    
T  42992289 tgttgcctttttaaacccttgtttcagccccctctatctctctt--aaagtttagcatgatacaaggtatatatttatagtaaaagtataactcataaat 42992192  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||  ||||| |||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42992191 ttggaattaatattacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 42992095  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||        |||||||||||||| ||    
T  42992094 catcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaaccttttatatttttaaca 42991995  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatgtc 389  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||  |||||||||| |||||||||||||||||    
T  42991994 acaatattctccatccatcaaattttgagtcatactacaacattcttcaccttgactctaaattagtgatgatgtc 42991919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 15 - 353
Target Start/End: Complemental strand, 455910 - 455575
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||  || ||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  455910 tgttgcctttctaaacccttgtttcagccccctctatctctctc--aaggtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 455813  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| | ||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  455812 ttggaacaaataccgcactgaagatacgttt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 455715  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  455714 catcaaatcgttcttcatacgatacaaaaatatatttattgtccacaaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 455615  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||  | |||||||||||||||||||||||||||    
T  455614 acaatattccccatccatcaaattttgagtcatactacaa 455575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 25 - 389
Target Start/End: Original strand, 53915760 - 53916116
Alignment:
Q  25 ctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacgaa 123  Q
    |||||||||||||||||||||||||||||       || |||| ||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  53915760 ctaaacccttgtttcagccccctctatctt------aaggtttactctgattcaaggtctatatttatagtaaaagtataactcataaatttggaacgaa 53915853  T
Q  124 tatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcg 223  Q
    || |||||| |||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  53915854 taccacactcaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcg 53915950  T
Q  224 tccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattct 323  Q
    | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||||||||||||    
T  53915951 ttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattct 53916050  T
Q  324 tcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatgtc 389  Q
     | ||| ||||||||||||||||||||||| |||||   ||||||||| ||||||||||| |||||    
T  53916051 ccatccctcaaattttgagtcatactacaacattcttcgccttgactctaaattagtgataatgtc 53916116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 15 - 353
Target Start/End: Original strand, 10621784 - 10622125
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc------aaagtttgctctgatacaaggtctatatttatagtgaaa-tataactc 107  Q
    |||||| ||||||||||||||||||||| ||||||||||||||| |      |||||||   ||||||||||||||||||||||||| ||| ||||||||    
T  10621784 tgttgcttttctaaacccttgtttcagcaccctctatctctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactc 10621883  T
Q  108 ataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaata 207  Q
    ||||||||||||| |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10621884 ataaatttggaacaaataccacactgaagatacgttt----tttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 10621979  T
Q  208 tatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattt 307  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||       ||||||||||||    
T  10621980 tatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatcttcagcacaatatatatttgaaacaaatcttttatattt 10622079  T
Q  308 ttagcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||||||||| | |||||||||||||||||||||||||||    
T  10622080 ttagcaacaatattctccatccatcaaattttgagtcatactacaa 10622125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 15 - 353
Target Start/End: Complemental strand, 51943374 - 51943044
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||||||||||||| |||||||||| |||||||||||       | |||| ||||||| ||||||||||||||||||| ||| ||||| ||||||||    
T  51943374 tgttgcctttctaaacctttgtttcagcaccctctatctcc------aggtttactctgattcaaggtctatatttatagtaaaagtataaatcataaat 51943281  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    |||||||||||| ||||||||||||||||||         |||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  51943280 ttggaacgaataccacactgaagatacgttt---ttctttctccttcaatgaaagaatatttacatcaaaaatataatattccctttcaaaatatatttg 51943184  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  51943183 catcaaatcattcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 51943084  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  51943083 acaatattcttcatccatcaaattttgagtcatactacaa 51943044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 23 - 353
Target Start/End: Complemental strand, 41849147 - 41848806
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatct----ctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttgg 117  Q
    |||||||||||||||||||||||||||||||    ||||| ||||||||   ||||||||| ||||||||||||||| ||| ||||||||||||||||||    
T  41849147 ttctaaacccttgtttcagccccctctatctatctctctctcaaagtttagcctgatacaatgtctatatttatagtaaaagtataactcataaatttgg 41849048  T
Q  118 aacgaatatcacactgaagatacgtttcnnnnnnnn------ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatt 211  Q
    ||| |||| ||||||||||||||||||               ||| |||||| ||||||||||||||| |||||||||||||||| ||||||||||||||    
T  41849047 aacaaataccacactgaagatacgttttttttttttttttttctctttcagttaaagaatatttgcatcaaaaatataatattccttttcaaaatatatt 41848948  T
Q  212 tgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttag 311  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||    
T  41848947 tgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttag 41848848  T
Q  312 caacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||||| | |||||||||||||||||||||||||||    
T  41848847 caacaatattctccatccatcaaattttgagtcatactacaa 41848806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 31 - 353
Target Start/End: Complemental strand, 1313397 - 1313084
Alignment:
Q  31 ccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacgaatatcac 129  Q
    ||||||||||||||||||||||||      || |||| ||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  1313397 ccttgtttcagccccctctatctc------aaggtttactctgattcaaggtctatatttatagtaaaagtataactcataaatttggaacgaatatcac 1313304  T
Q  130 actgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttc 229  Q
    ||| ||||||| |||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1313303 actaaagatactttt----tttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttc 1313208  T
Q  230 atacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttcc 329  Q
    ||||| |||| |||||||||||||||||||||||||||||||| |||||||||| ||||       || ||||||||||||||||||||||||| | |||    
T  1313207 atacggtacagaaatatatttattgtccataaatatattttcaacacaaaatatatttgaaacaaatcatttatatttttagcaacaatattctccatcc 1313108  T
Q  330 atcaaattttgagtcatactacaa 353  Q
    ||||||||||||||||||||||||    
T  1313107 atcaaattttgagtcatactacaa 1313084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 23 - 353
Target Start/End: Original strand, 27635889 - 27636210
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa--tataactcataaatttggaac 120  Q
    ||||||||||||||||||||||||||||||||      || |||| |||| || |||||||||||||| |||| |||  |||||||||||||||||||||    
T  27635889 ttctaaacccttgtttcagccccctctatctc------aaggtttactctaattcaaggtctatatttgtagtaaaaaatataactcataaatttggaac 27635982  T
Q  121 gaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaa 220  Q
    ||||| |||||||||||||| |||         |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  27635983 gaataccacactgaagatacattt-----ttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaa 27636077  T
Q  221 tcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatat 320  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       | |||||||||||||||||||||||    
T  27636078 tcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaactaatattttatatttttagcaacaatat 27636177  T
Q  321 tcttcttccatcaaattttgagtcatactacaa 353  Q
    ||| | ||||||||||||| | |||||||||||    
T  27636178 tctccatccatcaaattttaaatcatactacaa 27636210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 15 - 353
Target Start/End: Complemental strand, 42990307 - 42989954
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttg-----ctc-----------tgatacaaggtctatatttatagtgaa 98  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |      |||           |||||||||||||||||||||||| ||    
T  42990307 tgttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtctctctctctcaaagtttagcatgatacaaggtctatatttatagtaaa 42990208  T
Q  99 a-tataactcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccc 197  Q
    | ||||||||||||||||||||| |||| |||||||||||||| |||         |||||||||||||||||||||||||| ||||||||||||||| |    
T  42990207 agtataactcataaatttggaacaaataccacactgaagatacattt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattctc 42990110  T
Q  198 tttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntc 297  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||       |     
T  42990109 tttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatactttcagcaaaaaatatatttgaaacaaatt 42990010  T
Q  298 ttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  42990009 ttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 42989954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 23 - 350
Target Start/End: Original strand, 53917926 - 53918245
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacg 121  Q
    ||||||||| |||||||||||||||| |||||      || ||||  |||||| ||||||||||||||||||| ||| ||||||||||||||||| ||||    
T  53917926 ttctaaaccattgtttcagccccctccatctc------aaggtttaatctgattcaaggtctatatttatagtaaaagtataactcataaatttgaaacg 53918019  T
Q  122 aatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 221  Q
    |||| ||||||||||||||||||         |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  53918020 aataccacactgaagatacgttt---ttttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 53918116  T
Q  222 cgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatatt 321  Q
    ||| ||||||||| || ||||||||||||||||||||||||||||| |||| |||||||||| ||||       ||||||||||||||||||||||||||    
T  53918117 cgttcttcatacggtaaaaaaatatatttattgtccataaatatatgttcaacacaaaatatatttgaaacaaatcttttatatttttagcaacaatatt 53918216  T
Q  322 cttcttccatcaaattttgagtcatacta 350  Q
    || | ||||||||||||||||||||||||    
T  53918217 ctccatccatcaaattttgagtcatacta 53918245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 15 - 145
Target Start/End: Complemental strand, 6561813 - 6561689
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaatataactcataaatt 114  Q
    ||||||||||||||||||||||||||||||||||||||||      || |||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  6561813 tgttgcctttctaaacccttgtttcagccccctctatctc------aaggtttactctgatacaaggtctatatttatagagaaatataactcataaatt 6561720  T
Q  115 tggaacgaatatcacactgaagatacgtttc 145  Q
    |||||||||||||||||||||||||||||||    
T  6561719 tggaacgaatatcacactgaagatacgtttc 6561689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 4308535 - 4308613
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||||||    
T  4308535 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatttatagtgaaa 4308613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 27101435 - 27101517
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    ||||||||||||||||||||||||||||| ||||||||||| || |||  |||||||||||||||||||||||||||||||||||    
T  27101435 tgttgcctttctaaacccttgtttcagcctcctctatctctatctcaa--tttgctctgatacaaggtctatatttatagtgaaa 27101517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 9604861 - 9604944
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    ||||||||||||||||| |||||||||||||||||||||||||| || ||||| |||| ||||||||||||||||||||||||||    
T  9604861 tgttgcctttctaaacc-ttgtttcagccccctctatctctctctcagagttttctctaatacaaggtctatatttatagtgaaa 9604944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 6063700 - 6063776
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||||    ||||||||||| ||||||||||||||||||||||||    
T  6063700 tgttgcctttctaaacccttgtttcagccccctctatctct----caaagtttgctttgatacaaggtctatatttatagt 6063776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 10084645 - 10084721
Alignment:
Q  17 ttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||||||||||||||| |||||||||||||||||||  |||||||||||| |||||||||||||||||||||||    
T  10084645 ttgcctttctaaacccttgttccagccccctctatctctct--caaagtttgctccgatacaaggtctatatttatagt 10084721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 11170407 - 11170333
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||    
T  11170407 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatttatagt 11170333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 51727260 - 51727338
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    ||||||||||||||||||||||||||||||||| ||||||      |||||||||||||||||||||||||||||||||||||||    
T  51727260 tgttgcctttctaaacccttgtttcagccccctttatctc------aaagtttgctctgatacaaggtctatatttatagtgaaa 51727338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 10191565 - 10191641
Alignment:
Q  17 ttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||||||||||||||| ||||||||| ||||||||||  ||||||||||| |||||||||||||||||||||||    
T  10191565 ttgcctttctaaacccttgttccagccccctttatctctctc--aaagtttgctccgatacaaggtctatatttatagt 10191641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 38890043 - 38889968
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||   ||||||||||||||||||||||    
T  38890043 tgttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttgct---atacaaggtctatatttatagt 38889968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 11163153 - 11163082
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttat 92  Q
    |||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||||||||||||    
T  11163153 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatttat 11163082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 3859531 - 3859457
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      | ||||||||||||||||||||||||||||||||||    
T  3859531 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggtctatatttatagt 3859457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 5522869 - 5522943
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      | ||||||||||||||||||||||||||||||||||    
T  5522869 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggtctatatttatagt 5522943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 35918203 - 35918281
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    |||||||||||||||||||||||||||||||||||||||      |||| |||||| ||||||||||||||||||||||||||||    
T  35918203 tgttgcctttctaaacccttgtttcagccccctctatct------caaaatttgctatgatacaaggtctatatttatagtgaaa 35918281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 43226089 - 43226011
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    |||||||||||||||||||||||||||||||||||||||      | |||||||||||||||||| |||||||||||||||||||    
T  43226089 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaatgtctatatttatagtgaaa 43226011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 50494002 - 50493924
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    |||||| |||||||||||||||||||||||||||||||||||      |||||||| ||||||||||||||||||||||||||||    
T  50494002 tgttgcttttctaaacccttgtttcagccccctctatctctc------agtttgctttgatacaaggtctatatttatagtgaaa 50493924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 272
Target Start/End: Complemental strand, 11066429 - 11066346
Alignment:
Q  189 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttca 272  Q
    ||||||| |||| ||||||||||||||||||||  ||||||||| | || ||||||||||||||||||||||||| ||||||||    
T  11066429 aatattctctttaaaaatatatttgcatcaaatattccttcatatggtaaaaaaatatatttattgtccataaatgtattttca 11066346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 1321441 - 1321370
Alignment:
Q  18 tgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||||||||||||||||||||||||||||||      |||||||||||||||||||| |||||||||||||||    
T  1321441 tgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaagtctatatttatagt 1321370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 296 - 353
Target Start/End: Complemental strand, 6561672 - 6561615
Alignment:
Q  296 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  6561672 tcttttatatttttagcaacaatattcttcatccatcaaatttcgagtcatactacaa 6561615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 24979710 - 24979632
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    ||||| |||||||||||||||||||||||||||||||||      |||||||| |||||||||||||| ||||||||||||||||    
T  24979710 tgttgtctttctaaacccttgtttcagccccctctatct------caaagtttactctgatacaaggtatatatttatagtgaaa 24979632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 26720551 - 26720477
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||| ||||||||||||||||||      | ||||||||||||||||||||||||||||||||||    
T  26720551 tgttgcctttctaaacccttatttcagccccctctatct------ccaagtttgctctgatacaaggtctatatttatagt 26720477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 43228294 - 43228216
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    |||||||||||||||| ||||||||||||||||||||||      | |||||||||||||||||| |||||||||||||||||||    
T  43228294 tgttgcctttctaaactcttgtttcagccccctctatct------ccaagtttgctctgatacaatgtctatatttatagtgaaa 43228216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 6066050 - 6066125
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||||||||||||||||||||||||||     |||| || ||||||||||| ||||||||||||||||||||||||    
T  6066050 tgttgcctttctaaacccttgtttcagccccc-----ctctatctcaaagtttgctttgatacaaggtctatatttatagt 6066125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 54287487 - 54287559
Alignment:
Q  200 tcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttca 272  Q
    ||||||||||||||||||||||  ||||||||||  ||||||||| |||||||| ||||||||||||||||||    
T  54287487 tcaaaatatatttgcatcaaatattccttcatacagtacaaaaatgtatttattatccataaatatattttca 54287559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 11072900 - 11072825
Alignment:
Q  69 ctctgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgttt 144  Q
    |||||||||||| ||| ||||||||| ||||||||||||| |||||||||||| ||||||| ||||||||| ||||    
T  11072900 ctctgatacaagatctttatttatagagaaatataactcacaaatttggaacggatatcacgctgaagatatgttt 11072825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 22114561 - 22114633
Alignment:
Q  17 ttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||||||||||||||||||||||| |||||||      | ||||||||||||||||||||||||||||||||||    
T  22114561 ttgcctttctaaacccttgtttcagccccttctatct------ccaagtttgctctgatacaaggtctatatttatagt 22114633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 18099424 - 18099493
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatt 89  Q
    ||||||| ||||||||||||||||||||||||||||||||||     |||||| |||||||||||||||||||||    
T  18099424 tgttgccattctaaacccttgtttcagccccctctatctctc-----aagtttactctgatacaaggtctatatt 18099493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 53974011 - 53974077
Alignment:
Q  205 atatatttgcatcaaatcgtcctt-catacgatacaaaaatatatttattgtccataaatatatttt 270  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||||||||||| |||||||||||||    
T  53974011 atatatttgcatcaaatcttcctttcatacggtacaaaaatatatttattgtctataaatatatttt 53974077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 5191656 - 5191582
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      | |||||||||  |||||||||||||||||||||||    
T  5191656 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgcttagatacaaggtctatatttatagt 5191582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 6719357 - 6719439
Alignment:
Q  21 ctttctaaacccttgtttcagccccctctatctctctcgc--------aaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||| ||||||||||||||||||||||| |        |||||||||||||||||||||||||||||||||||    
T  6719357 ctttctaaacccttatttcagccccctctatctctctctctctctctcaaagtttgctctgatacaaggtctatatttatagt 6719439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 15780863 - 15780789
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||| |||||||||||||||||||||||||||||||      | |||||| |||||||||||||||||||||||||||    
T  15780863 tgttgccattctaaacccttgtttcagccccctctatct------ccaagtttactctgatacaaggtctatatttatagt 15780789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 35777424 - 35777350
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||| ||||||||||||||||||||||||||||||||      ||||||||||| |||||||| |||||||||||||||    
T  35777424 tgttgcttttctaaacccttgtttcagccccctctatct------caaagtttgctttgatacaatgtctatatttatagt 35777350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 45882942 - 45882868
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      || ||||| || ||||||||||||||||||||||||    
T  45882942 tgttgcctttctaaacccttgtttcagccccctctatct------catagtttactatgatacaaggtctatatttatagt 45882868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 18097154 - 18097229
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||| |||||||||||||||| |||||||||||||||||     |||||| || ||||||||||||||||||||||||    
T  18097154 tgttgccattctaaacccttgtttgagccccctctatctctc-----aagtttactatgatacaaggtctatatttatagt 18097229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 30005844 - 30005801
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctc 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  30005844 tgttgcctttctaaacccttgtttcagccccctctatctctctc 30005801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 205 - 275
Target Start/End: Complemental strand, 11072801 - 11072731
Alignment:
Q  205 atatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 275  Q
    |||||||||||||||||| ||| | ||||| ||||||||| ||||| |||||||||||| |||||||||||    
T  11072801 atatatttgcatcaaatcttccgtaatacggtacaaaaatctatttgttgtccataaatgtattttcagca 11072731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 47149149 - 47149228
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgc-tctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||| ||  ||| |  | | ||||||||||||||||||||||||||    
T  47149149 tgttgcctttctaaacccttgtttcagccccctctatctccct--caaggcctacatctgatacaaggtctatatttatagt 47149228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 1626937 - 1627011
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      ||| |||| | ||||||||| |||||||||||||||    
T  1626937 tgttgcctttctaaacccttgtttcagccccctctatct------caaggtttacactgatacaatgtctatatttatagt 1627011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 10958577 - 10958651
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||| ||||||||||||||||||||||||||||||| |      | |||| |||||||||||||||||||||||||||    
T  10958577 tgttgccattctaaacccttgtttcagccccctctatcttt------atgtttactctgatacaaggtctatatttatagt 10958651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 32219098 - 32219020
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||      ||||||||  || ||||||||||||||||||||| |||||    
T  32219098 tgttgcctttctgaacccttgtttcagccccctctatct------caaagtttagtcagatacaaggtctatatttatactgaaa 32219020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 10956281 - 10956355
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||| ||||||||||||||||||||||||||||||| ||     | |||| |||||||||||||||||||||||||||    
T  10956281 tgttgccattctaaacccttgtttcagccccctctatct-tc-----atgtttactctgatacaaggtctatatttatagt 10956355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 27101540 - 27101592
Alignment:
Q  45 cctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    |||||||||||||| |||  |||||||||||||||||||||||||||||||||||    
T  27101540 cctctatctctctctcaa--tttgctctgatacaaggtctatatttatagtgaaa 27101592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 28102256 - 28102295
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28102256 tgttgcctttctaaacccttgtttcagccccctctatctc 28102295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 28137549 - 28137588
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28137549 tgttgcctttctaaacccttgtttcagccccctctatctc 28137588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 38210373 - 38210330
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctc 58  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  38210373 tgttgcttttctaaacccttgtttcagccccctctatctctctc 38210330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 25690651 - 25690688
Alignment:
Q  62 aagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25690651 aagtttgctctgatacaaggtctatatttatagtgaaa 25690688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 29956642 - 29956589
Alignment:
Q  46 ctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    |||| |||||||| ||||||||||||| |||||| |||||||||||||||||||    
T  29956642 ctctctctctctctcaaagtttgctctaatacaaagtctatatttatagtgaaa 29956589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 30005797 - 30005744
Alignment:
Q  46 ctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    |||| |||||||| ||||||||||||| |||||| |||||||||||||||||||    
T  30005797 ctctctctctctctcaaagtttgctctaatacaaagtctatatttatagtgaaa 30005744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 32264293 - 32264371
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||| |||||||||||||||      ||  ||| |||||||||||||||||||||||||||    
T  32264293 tgttgcctttctaaacccttgtttgagccccctctatctcaaagttaa--tttactctgatacaaggtctatatttatagt 32264371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 47701849 - 47701923
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||||||||||||||||||||||||||| |||||      ||| |||| | ||||||||| |||||||||||||||    
T  47701849 tgttgcctttctaaacccttgtttcagccccctttatct------caaggtttacactgatacaatgtctatatttatagt 47701923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 345
Target Start/End: Original strand, 53974148 - 53974197
Alignment:
Q  296 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 345  Q
    ||||||||||||||| |||||| ||||||| |||||||||||||||||||    
T  53974148 tcttttatatttttaacaacaacattcttcatccatcaaattttgagtca 53974197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 29956682 - 29956646
Alignment:
Q  22 tttctaaacccttgtttcagccccctctatctctctc 58  Q
    |||||||||||||||||||||||||||||||||||||    
T  29956682 tttctaaacccttgtttcagccccctctatctctctc 29956646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 28100295 - 28100334
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  28100295 tgttgcttttctaaacccttgtttcagccccctctatctc 28100334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 43423717 - 43423756
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  43423717 tgttgcctttctaaacccttgtttcagccccctctttctc 43423756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 51675009 - 51675048
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  51675009 tgttgtctttctaaacccttgtttcagccccctctatctc 51675048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 99
Target Start/End: Original strand, 53896489 - 53896528
Alignment:
Q  60 caaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  53896489 caaagtttgctttgatacaaggtctatatttatagtgaaa 53896528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 144
Target Start/End: Complemental strand, 11066543 - 11066469
Alignment:
Q  70 tctgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgttt 144  Q
    ||||||||||| | | ||||||||| |||| | |||||| |||||||||||| ||||||| ||||||||| ||||    
T  11066543 tctgatacaagatttgtatttatagagaaagagaactcacaaatttggaacggatatcacgctgaagatatgttt 11066469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 345
Target Start/End: Complemental strand, 11072690 - 11072644
Alignment:
Q  299 tttatatttttagcaacaatattcttcttccatcaaattttgagtca 345  Q
    ||||||||||| |||||||| |||||| |||||||||||||||||||    
T  11072690 tttatattttttgcaacaatcttcttcatccatcaaattttgagtca 11072644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 28761682 - 28761756
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||| |||||||||||||||||||| ||||||||||||      ||| |||| ||||||| ||| |||||||||||||||    
T  28761682 tgttgtctttctaaacccttgtttcaaccccctctatct------caaggtttactctgatgcaaagtctatatttatagt 28761756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 43421669 - 43421743
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||| |||| |||||||      ||| |||| | ||||||||| |||||||||||||||    
T  43421669 tgttgcctttctaaacccttgtttcaaccccttctatct------caaggtttacactgatacaatgtctatatttatagt 43421743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 120
Target Start/End: Original strand, 1618916 - 1619012
Alignment:
Q  22 tttctaaacccttgttt-cagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaa 119  Q
    ||||||||||||||||| ||||||||||| ||||||    || |||| || || ||||||||||||||||||||| ||| |||  |||||||| ||||||    
T  1618916 tttctaaacccttgttttcagccccctctgtctctc----aaggtttactatggtacaaggtctatatttatagtcaaagtatccctcataaaattggaa 1619011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 3314687 - 3314648
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  3314687 tgttacctttctaaacccttatttcagccccctctatctc 3314648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 5535882 - 5535929
Alignment:
Q  228 tcatacgatacaaaaatatatttattgtccataaatatattttcagca 275  Q
    |||||||||||||| |||| |||  |||||||||||||||||||||||    
T  5535882 tcatacgatacaaatatatcttttctgtccataaatatattttcagca 5535929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 5927018 - 5927057
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  5927018 tgttgcatttctaaacccttgtttcagccctctctatctc 5927057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 6231452 - 6231413
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  6231452 tgttgcctttctaaatccttgtttcagcccgctctatctc 6231413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 3306795 - 3306728
Alignment:
Q  22 tttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||| |||||||      | |||| | ||||||||| |||||||||||||||    
T  3306795 tttctaaacccttgtttcagccccctatatctct------aggtttacactgatacaatgtctatatttatagt 3306728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 53468709 - 53468747
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatct 53  Q
    ||||||| ||||||||||||||||||||||||| |||||    
T  53468709 tgttgccattctaaacccttgtttcagccccctttatct 53468747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 115
Target Start/End: Original strand, 53973898 - 53973936
Alignment:
Q  77 caaggtctatatttatagtgaaatataactcataaattt 115  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  53973898 caagatctatatttatagagaaatataactcataaattt 53973936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 53597201 - 53597144
Alignment:
Q  64 gtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaac 120  Q
    |||| ||||||||||||||||||||||||||| ||| |||  |||||||| |||||||    
T  53597201 gtttactctgatacaaggtctatatttatagtaaaagtatccctcataaaattggaac 53597144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 222; Significance: 1e-122; HSPs: 4)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 15 - 389
Target Start/End: Complemental strand, 52043 - 51675
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||| ||||||||||||||||||||||||||||||||||    |||||||  | |||||||||||||||||||||||| ||| ||||||||||||||    
T  52043 tgttgccattctaaacccttgtttcagccccctctatctctc----aaagtttagtatgatacaaggtctatatttatagtaaaagtataactcataaat 51948  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    |||||||||||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  51947 ttggaacgaataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 51851  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||       ||||||||||||||||||    
T  51850 catcaaatcgttctttatacggtacaaaaatatatttattgtccataaatatattttcaccacaaaatatatttgaaacaaatcttttatatttttagca 51751  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatgtc 389  Q
    ||| |||||| | ||||||||||||||||||||||||||| |||||| |||||||||| ||||||| |||||||||    
T  51750 acattattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattagcgatgatgtc 51675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 296 - 353
Target Start/End: Complemental strand, 50218 - 50161
Alignment:
Q  296 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  50218 tcttttatatttttagcaacattattcttcatccatcaaattttgagtcatactacaa 50161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 183896 - 183973
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    ||||||||||||||||| ||||||||||||  ||||||||      ||||||| |||||||||||||||||||||||||||||||    
T  183896 tgttgcctttctaaacctttgtttcagccct-tctatctc------aaagtttactctgatacaaggtctatatttatagtgaaa 183973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 275
Target Start/End: Complemental strand, 170115 - 170076
Alignment:
Q  236 tacaaaaatatatttattgtccataaatatattttcagca 275  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  170115 tacaaaaatatatttgttgtccatgaatatattttcagca 170076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 15 - 387
Target Start/End: Original strand, 35215842 - 35216216
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc----aaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcat 109  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |    |||||||   ||||||||||||||||||||||||| ||| ||||||||||    
T  35215842 tgttgcttttctaaacccttgtttcagccccctctatctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcat 35215941  T
Q  110 aaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatata 209  Q
    ||||||||||| |||| ||||| |||||| | |||         |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  35215942 aaatttggaacaaataccacaccgaagattcattt---ttttttctccttcagtgaaagaatatctgcatcaaaaatataatattccctttcaaaatata 35216038  T
Q  210 tttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatattttt 309  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||    
T  35216039 tttgcatcaaatcgttctttatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttt 35216138  T
Q  310 agcaacaatattcttcttccatcaaattttgagtcatactacaaaattctcaaccttgactccaaattagtgatgatg 387  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  35216139 agcaacaatattcttcatccatcaaattttgagtcatactacaacattctccaccttgactctaaattagtgatgatg 35216216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 15 - 353
Target Start/End: Original strand, 23452493 - 23452827
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||||||||||||||||||||||||||||||| ||||||||  |||||||   ||||||||||||||||||||||||| ||| ||||||||||||||    
T  23452493 tgttgcctttctaaacccttgtttcagccccctctgtctctctc--aaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 23452590  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| |||||||||| ||| |||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23452591 ttggaacaaataccacactgaaggtactttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 23452687  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||       ||||||||||||||||||    
T  23452688 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatttattttcagcataaaatatatttgaaacaaatcttttatatttttagca 23452787  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  23452788 acaatattctccatccatcaaattttgagtcatactacaa 23452827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 15 - 353
Target Start/End: Complemental strand, 42452782 - 42452451
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||| ||||||||||||| | ||| ||||||||||||||    
T  42452782 tgttgcctttctaaacccttgtttcagccccctctatctcc------aagtttgctctgatacaatgtctatatttataataaaagtataactcataaat 42452689  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||| |||| ||||| |||||||| |||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42452688 ttggaacaaataccacaccgaagatacattt--tttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 42452591  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  42452590 catcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 42452491  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  42452490 acaatattcttcatccatcaaattttaagtcatactacaa 42452451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 15 - 353
Target Start/End: Original strand, 35218219 - 35218563
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc--------aaagtttgctctgatacaaggtctatatttatagtgaaa-tataac 105  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |        |||||||   || |||||||||||||||||||||| ||| ||||||    
T  35218219 tgttgcttttctaaacccttgtttcagccccctctatctctctctctctctctcaaagtttagccttatacaaggtctatatttatagtaaaagtataac 35218318  T
Q  106 tcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaa 205  Q
    ||||||||||||| | |||| |||||||||||| |||||         |||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  35218319 tcataaatttggagcaaataccacactgaagattcgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaa 35218415  T
Q  206 tatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatat 305  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  35218416 tatatttgcatcaaatcgttctttatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 35218515  T
Q  306 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  35218516 ttttagcaacaatattcttcatccatcaaattttgagtcatactacaa 35218563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 15 - 353
Target Start/End: Original strand, 42923765 - 42924092
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    ||||||| ||||||||||||||||||||| ||||||||||||    || |||| || |||| ||||||||||||||||||| ||| ||||||||||||||    
T  42923765 tgttgccattctaaacccttgtttcagcctcctctatctctc----aaggtttactatgattcaaggtctatatttatagtaaaagtataactcataaat 42923860  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    ||||||||||   ||| |||||||||| | |         |||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||    
T  42923861 ttggaacgaa---cac-ctgaagatacttat----ttgttctccttcagtgaaagaatatttgcatcaaaaatataatatttcttttcaaaatatatttg 42923952  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  42923953 catcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 42924052  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  42924053 acaatattctccatccatcaaattttgagtcatactacaa 42924092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 70 - 353
Target Start/End: Original strand, 27583631 - 27583905
Alignment:
Q  70 tctgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaaga 169  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||| ||||        ||||||||||||||||    
T  27583631 tctgatacaagatctatatttatagagaaatataactcataaatttggaacggatatcacgctgaagatacatttctttttt--ctccttcagtgaaaga 27583728  T
Q  170 atatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattt 269  Q
    |||||||||| |||       |||||| ||||||||||||||||||||||||  ||||||||| | || ||||||||||||||||| ||||||||||| |    
T  27583729 atatttgcatcaaa-------tattccttttcaaaatatatttgcatcaaatattccttcatatggtataaaaatatatttattgttcataaatatatct 27583821  T
Q  270 tcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||||||| ||||       |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  27583822 tcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaaatttgagtcatactacaa 27583905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 189 - 345
Target Start/End: Original strand, 28568584 - 28568740
Alignment:
Q  189 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttg 288  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  28568584 aatattccctttcaaaatatatttgcatcaaatcttccttcacacgatacaaaaatatatttattgtccataaatatattttcaaaacaaaatatatttg 28568683  T
Q  289 nnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 345  Q
           ||||||||| |||||||||||||||||||| || ||||||||||||||||    
T  28568684 aaacaaatcttttatagttttagcaacaatattcttcatctatcaaattttgagtca 28568740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 79 - 275
Target Start/End: Complemental strand, 15693858 - 15693669
Alignment:
Q  79 aggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaaga-atatttgc 177  Q
    |||| ||||||||||| |||||||||||||||||||| ||||| ||||||| |||||||||||||||        |||||||||   || | ||||||||    
T  15693858 aggtttatatttatagagaaatataactcataaatttagaacggatatcacgctgaagatacgtttcttttttt-ctccttcagcacaaaatatatttgc 15693760  T
Q  178 ataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 275  Q
    || |||       ||| |||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  15693759 atcaaa-------tatcccctttaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatttattgcccataaatatattttcagca 15693669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 5377685 - 5377767
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    ||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  5377685 tgttgcctttctaaacccttgtttcagtcccctctatctctct--caaagtttgctctgaaacaaggtctatatttatagtgaaa 5377767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 225 - 353
Target Start/End: Original strand, 27136367 - 27136503
Alignment:
Q  225 ccttcatacgatacaaaaatatatttattgtccataaatatattt--------tcagcacaaaatatctttgnnnnnnntcttttatatttttagcaaca 316  Q
    |||||||||| |||||||||||||||||| |||||||||||||||        ||| |||||||||| ||||       |||||||||||||||||| ||    
T  27136367 ccttcatacggtacaaaaatatatttattttccataaatatatttatatattttcaacacaaaatatatttgaaacaaatcttttatatttttagcacca 27136466  T
Q  317 atattcttcttccatcaaattttgagtcatactacaa 353  Q
    ||||||||| |||||||||||||||||||||||||||    
T  27136467 atattcttcatccatcaaattttgagtcatactacaa 27136503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 24162468 - 24162542
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||    
T  24162468 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaaggtctatatttatagt 24162542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 348
Target Start/End: Original strand, 34575608 - 34575696
Alignment:
Q  260 aaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatac 348  Q
    |||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34575608 aaatatattttcagcacaaaatatatttagaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtcatac 34575696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 7502723 - 7502638
Alignment:
Q  189 aatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagc 274  Q
    |||||| ||||| ||||||||||||||||||||| ||  |||||| |||||||||||| |||||||| ||||||||||||||||||    
T  7502723 aatatttcctttaaaaatatatttgcatcaaatcttctgtcatacaatacaaaaatatttttattgttcataaatatattttcagc 7502638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 13910300 - 13910374
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      | ||||||||||||||||||||||||||||||||||    
T  13910300 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggtctatatttatagt 13910374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 19504601 - 19504675
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      | ||||||||||||||||||||||||||||||||||    
T  19504601 tgttgcctttctaaacccttgtttcagccccctctatct------ccaagtttgctctgatacaaggtctatatttatagt 19504675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 40032314 - 40032388
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      |||||||| |||||||||||||||||||||||||||    
T  40032314 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttactctgatacaaggtctatatttatagt 40032388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 204 - 275
Target Start/End: Complemental strand, 39287042 - 39286971
Alignment:
Q  204 aatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 275  Q
    ||||||||||||||||||| || |||||| | ||||||||||||||||||||||||||||||||||| ||||    
T  39287042 aatatatttgcatcaaatcttcattcatatggtacaaaaatatatttattgtccataaatatattttaagca 39286971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 45280248 - 45280319
Alignment:
Q  22 tttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    |||||||||||||||||||||||||||||||||      |||||||||||||||||||||| ||||||||||||||||    
T  45280248 tttctaaacccttgtttcagccccctctatctc------aaagtttgctctgatacaaggtatatatttatagtgaaa 45280319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 27104798 - 27104724
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||| ||||||||||||||||||||||||||      |||||||| |||||||||||||||||||||||||||    
T  27104798 tgttgcctttctgaacccttgtttcagccccctctatct------caaagttttctctgatacaaggtctatatttatagt 27104724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 42064514 - 42064440
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||| ||||||||||      | ||||||||||||||||||||||||||||||||||    
T  42064514 tgttgcctttctaaacccttgtttcagctccctctatct------ccaagtttgctctgatacaaggtctatatttatagt 42064440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 21520949 - 21521025
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||||||||||||||||||||||||| |||||||||    ||||||||  ||||||||||||| ||||||||||||    
T  21520949 tgttgcctttctaaacccttgtttcagccccatctatctct----caaagtttagtctgatacaaggtttatatttatagt 21521025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 196 - 275
Target Start/End: Original strand, 41304806 - 41304884
Alignment:
Q  196 cctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 275  Q
    ||||| ||||||||||||||||||||| ||||||||| | |||||||||||||||| | |||||||||||||| ||||||    
T  41304806 cctttaaaaatatatttgcatcaaatcttccttcatatg-tacaaaaatatatttactatccataaatatattgtcagca 41304884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 19502267 - 19502346
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaat 100  Q
    |||||||||||||||| |||||||||||||||| ||||||       |||||||||||||||||||||||||||||||||| ||||    
T  19502267 tgttgcctttctaaactcttgtttcagccccctttatctcc------aagtttgctctgatacaaggtctatatttatagtaaaat 19502346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 154 - 250
Target Start/End: Original strand, 34575528 - 34575617
Alignment:
Q  154 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatattt 250  Q
    |||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||||||  ||||| ||| | |||||||||||||||    
T  34575528 ctccttcagtgaaagaatatttgcatcaaa-------tattccctttcaaaatatatttgcatcaaattttcctttatatggtacaaaaatatattt 34575617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 197 - 275
Target Start/End: Original strand, 41303457 - 41303535
Alignment:
Q  197 ctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagca 275  Q
    |||| |||||||||||| ||||| || ||||||| ||| ||||||| |||||||| |||||||||||||||||||||||    
T  41303457 ctttaaaaatatatttgaatcaattcttccttcacacggtacaaaattatatttactgtccataaatatattttcagca 41303535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 6264401 - 6264475
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||||||||||| |||||||||||||||||||||      ||||||||  ||||||||||||||||||||||||||    
T  6264401 tgttgcctttctaaacctttgtttcagccccctctatct------caaagtttagtctgatacaaggtctatatttatagt 6264475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 77 - 144
Target Start/End: Original strand, 41304696 - 41304763
Alignment:
Q  77 caaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgttt 144  Q
    |||| ||| ||||||||| |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  41304696 caagatctgtatttatagagaaatataactcataaatttggaatggatatcacgctgaagatacgttt 41304763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 22163203 - 22163277
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||||||||| |||||||||||||||||||||||      |||||||| | ||||||||| |||||||||||||||    
T  22163203 tgttgcctttctaaatccttgtttcagccccctctatct------caaagtttacactgatacaatgtctatatttatagt 22163277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 22287592 - 22287666
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||||||||||||||||||||||||||| |||||      |||||||| || | ||||||||||||||||||||||    
T  22287592 tgttgcctttctaaacccttgtttcagccccctatatct------caaagtttactttaatacaaggtctatatttatagt 22287666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 22407665 - 22407739
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||| |||| |||||      || ||||| |||||||||||||||||||||||||||    
T  22407665 tgttgcctttctaaacccttgtttcagcaccctatatct------cacagtttactctgatacaaggtctatatttatagt 22407739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 28568395 - 28568346
Alignment:
Q  296 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 345  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  28568395 tcttttatatttttaacaacaatattcttcatccatcaaattttgagtca 28568346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 31733021 - 31733095
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      ||| |||| ||||| ||||| |||||||||||||||    
T  31733021 tgttgcctttctaaacccttgtttcagccccctctatct------caatgtttactctgttacaaagtctatatttatagt 31733095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 38020201 - 38020161
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctct 55  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38020201 tgttgcctttctaaacccttgtttcagccccctctatctct 38020161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 19007639 - 19007600
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19007639 tgttgcctttctaaacccttgtttcagccccctctatctc 19007600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 43623824 - 43623898
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||||||||||| |||||||| ||||||||||||| |      ||||| |||||||||||||||||| ||||||||    
T  43623824 tgttgcctttctaaaccattgtttcacccccctctatctccc------agtttactctgatacaaggtctatttttatagt 43623898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 28196636 - 28196597
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  28196636 tgttgcctttctaaacctttgtttcagccccctctatctc 28196597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 345
Target Start/End: Complemental strand, 15693629 - 15693583
Alignment:
Q  299 tttatatttttagcaacaatattcttcttccatcaaattttgagtca 345  Q
    ||||||||||||||||||||||| ||| ||||||||||||| |||||    
T  15693629 tttatatttttagcaacaatattattcatccatcaaattttaagtca 15693583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 37963190 - 37963257
Alignment:
Q  22 tttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||||||||||||||||||||||||||      ||| |||| |||| |||||| |||||||||||||||    
T  37963190 tttctaaacccttgtttcagccccctctatct------caaggtttactcttatacaaagtctatatttatagt 37963257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 41303341 - 41303411
Alignment:
Q  70 tctgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatac 140  Q
    ||||||||||| | | ||||||||| |||||||||||| ||||||||||| | ||||||| |||| |||||    
T  41303341 tctgatacaagatatttatttatagagaaatataactcgtaaatttggaatggatatcacgctgatgatac 41303411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 17849110 - 17849077
Alignment:
Q  21 ctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||||||||||||||    
T  17849110 ctttctaaacccttgtttcagccccctctatctc 17849077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 22874134 - 22874102
Alignment:
Q  22 tttctaaacccttgtttcagccccctctatctc 54  Q
    |||||||||||||||||||||||||||||||||    
T  22874134 tttctaaacccttgtttcagccccctctatctc 22874102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 11739816 - 11739855
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||| ||||||||||||||||| ||||||||||||||||    
T  11739816 tgttgtctttctaaacccttgttccagccccctctatctc 11739855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 34979835 - 34979874
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  34979835 tgttacctttctaaacgcttgtttcagccccctctatctc 34979874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 38020142 - 38020103
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||||||||||||||||||||| || |||||||||||||    
T  38020142 tgttgcctttctaaacccttgttccaaccccctctatctc 38020103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 144
Target Start/End: Complemental strand, 7502835 - 7502762
Alignment:
Q  73 gatacaaggtctatatttatagtgaaatata--actcataaatttggaacgaatatcacactgaagatacgttt 144  Q
    |||||| | ||| ||||||||| ||||||||  |||| ||||||||||| | ||||||| ||||||||||||||    
T  7502835 gatacatgatctgtatttatagagaaatatataactcgtaaatttggaatggatatcacgctgaagatacgttt 7502762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 18800565 - 18800632
Alignment:
Q  22 tttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||| |||||      | | |||| | |||||||||||||||||||||||||    
T  18800565 tttctaaacccttgtttcagccccctatatct------ccatgtttaccctgatacaaggtctatatttatagt 18800632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 345
Target Start/End: Original strand, 41303573 - 41303623
Alignment:
Q  296 tcttttatatttt-tagcaacaatattcttcttccatcaaattttgagtca 345  Q
    ||||||||||||| |||||||||| |||||| ||||||||||| |||||||    
T  41303573 tcttttatattttttagcaacaatcttcttcatccatcaaattctgagtca 41303623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 20589635 - 20589586
Alignment:
Q  46 ctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||| |||||||| ||| ||||  ||||||||||||||||||||||||||    
T  20589635 ctctctctctctctcaaggtttcatctgatacaaggtctatatttatagt 20589586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 95
Target Start/End: Original strand, 36559072 - 36559105
Alignment:
Q  62 aagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||| ||||||||||||||||||||||||    
T  36559072 aagtttgctttgatacaaggtctatatttatagt 36559105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 95
Target Start/End: Original strand, 36561349 - 36561382
Alignment:
Q  62 aagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||| ||||||||||||||||||||||||    
T  36561349 aagtttgctttgatacaaggtctatatttatagt 36561382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 40699284 - 40699235
Alignment:
Q  46 ctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||| |||||||| ||| |||| ||||||| |||||||||||||||||||    
T  40699284 ctctctctctctctcaaggtttactctgatgcaaggtctatatttatagt 40699235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 45239238 - 45239275
Alignment:
Q  21 ctttctaaacccttgtttcagccccctctatctctctc 58  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  45239238 ctttctaaatcattgtttcagccccctctatctctctc 45239275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 95
Target Start/End: Original strand, 45332389 - 45332422
Alignment:
Q  62 aagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||| ||||||||||||||||||||||||    
T  45332389 aagtttgctttgatacaaggtctatatttatagt 45332422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 184; Significance: 2e-99; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 23 - 353
Target Start/End: Original strand, 11737 - 12059
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacg 121  Q
    ||||||| || |||||||||||||||||||||       | |||| ||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  11737 ttctaaatccctgtttcagccccctctatctcc------aggtttactctgattcaaggtctatatttatagtaaaagtataactcataaatttggaacg 11830  T
Q  122 aatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaat 221  Q
    |||| ||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11831 aataccacactgaagatacgttt---ttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 11927  T
Q  222 cgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatatt 321  Q
    ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||       | ||||||||||||||||||||||||    
T  11928 cgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaattttttatatttttagcaacaatatt 12027  T
Q  322 cttcttccatcaaattttgagtcatactacaa 353  Q
    || | ||||||||||||||| |||||||||||    
T  12028 ctccatccatcaaattttgaatcatactacaa 12059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 176; Significance: 1e-94; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 15 - 353
Target Start/End: Complemental strand, 79217 - 78885
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaat 113  Q
    |||||||||||||||||||||||| |||||||||||||||      ||  ||| ||||||| ||||||||||||||||||| ||  ||||||||||||||    
T  79217 tgttgcctttctaaacccttgttttagccccctctatctc------aagttttactctgattcaaggtctatatttatagtaaaggtataactcataaat 79124  T
Q  114 ttggaacgaatatcacactgaagatacgtttcnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 213  Q
    |||||||||||| |||||||||||||| |||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  79123 ttggaacgaataccacactgaagatacattt-tttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 79025  T
Q  214 catcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagca 313  Q
    ||||||||||| ||||||||  |||||||||||||||||| |||||||||||||||| |||| ||||||| ||||       ||||||||||||||||||    
T  79024 catcaaatcgttcttcatacagtacaaaaatatatttattatccataaatatatttttagcagaaaatatatttgagacaaatcttttatatttttagca 78925  T
Q  314 acaatattcttcttccatcaaattttgagtcatactacaa 353  Q
    |||||||||| | ||||||||||||| |||||||||||||    
T  78924 acaatattctccatccatcaaattttaagtcatactacaa 78885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 89; Significance: 9e-43; HSPs: 2)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 207 - 360
Target Start/End: Complemental strand, 4694 - 4541
Alignment:
Q  207 atatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatt 306  Q
    ||||||||||||||| |||||||||||  ||||||||||||| ||||||||||||||||||||||||||| |||||| || |       |||||||||||    
T  4694 atatttgcatcaaattgtccttcatacagtacaaaaatatatatattgtccataaatatattttcagcacgaaatatattcgaaacaaatcttttatatt 4595  T
Q  307 tttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctc 360  Q
    ||||||||||||||||||| ||||||||||||||||| ||||| ||| ||||||    
T  4594 tttagcaacaatattcttcatccatcaaattttgagttatactgcaacattctc 4541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 64 - 145
Target Start/End: Complemental strand, 4803 - 4722
Alignment:
Q  64 gtttgctctgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgtttc 145  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4803 gtttactctgatacaaggtctatatttatagagaaatataactcataaatttgaaacgaatatcacactgaagatacgtttc 4722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 261 - 387
Target Start/End: Original strand, 1 - 127
Alignment:
Q  261 aatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaaaattctc 360  Q
    ||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||    
T  1 aatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctc 100  T
Q  361 aaccttgactccaaattagtgatgatg 387  Q
     |||||||||| |||||||||||||||    
T  101 caccttgactctaaattagtgatgatg 127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 81; Significance: 5e-38; HSPs: 2)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 240 - 353
Target Start/End: Original strand, 2070 - 2183
Alignment:
Q  240 aaaatatatttattgtccataaatatattttcagcacaaaatatctttgnnnnnnntcttttatatttttagcaacaatattcttcttccatcaaatttt 339  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||| | |||||||||||||    
T  2070 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 2169  T
Q  340 gagtcatactacaa 353  Q
    ||||||||||||||    
T  2170 gagtcatactacaa 2183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 23 - 212
Target Start/End: Original strand, 1895 - 2080
Alignment:
Q  23 ttctaaacccttgtttcagccccctctatctctctcgcaaagtttgc-tctgatacaaggtctatatttatagtgaaatataactcataaatttggaacg 121  Q
    ||||||||||||||||||||| |||||||||||      | |||| | |||||||||||||||||||||| ||  |||| |||||| ||||||||||| |    
T  1895 ttctaaacccttgtttcagccacctctatctct------aggtttacatctgatacaaggtctatatttagag--aaatgtaactcgtaaatttggaatg 1986  T
Q  122 aatatcacactgaagatacgtttcnnnnnnnn---ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatattt 212  Q
     ||||||| ||||||||| |||||           |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  1987 gatatcacgctgaagataggtttccttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatattt 2080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 69547 - 69622
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttat 92  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  69547 tgttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttgctctgatataaggtctatatttat 69622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 73279 - 73357
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||| || ||||||| ||||||||||||||||    
T  73279 tgttgcctttctaaacccttgtttcagccccctctatctctct--caaagtttcctttgatacacggtctatatttatagt 73357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 41739 - 41817
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||||    
T  41739 tgttgcctttctaaacccttgtttcagccccctctatctct------aagtttgctctgatacaaggtctatatttatagtgaaa 41817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 1087 - 1165
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagtgaaa 99  Q
    ||||||||||||||||||||||||||||||| ||||||||      |||||||||||||||||||||||||||||||||||||||    
T  1087 tgttgcctttctaaacccttgtttcagccccttctatctc------aaagtttgctctgatacaaggtctatatttatagtgaaa 1165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 2912 - 2838
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||| ||||||||||||||    
T  2912 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttgctctgatacaagttctatatttatagt 2838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 6231 - 6157
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||| ||||||||||||||||||||||||||||||||      ||||||||||| ||||||||||||||||||||||||    
T  6231 tgttgcttttctaaacccttgtttcagccccctctatct------caaagtttgctttgatacaaggtctatatttatagt 6157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 4029 - 3955
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||||||||||||||||||||||||||||||||      ||||||||  ||||||||||||||||||||||||||    
T  4029 tgttgcctttctaaacccttgtttcagccccctctatct------caaagtttagtctgatacaaggtctatatttatagt 3955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 15051 - 14977
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||||||||| | ||||||||||||||||||||||      |||||||||||||||||||||||||||||||||||    
T  15051 tgttgcctttctaaatcattgtttcagccccctctatctc------aaagtttgctctgatacaaggtctatatttatagt 14977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 14638 - 14707
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaagtttgctctgatacaaggtctatat 88  Q
    ||||| ||||||||||| |||||||| ||||||||||||||    ||||||||||||| | |||||||||||||    
T  14638 tgttgtctttctaaaccattgtttcatccccctctatctct----caaagtttgctctaaaacaaggtctatat 14707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 29203 - 29119
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgc----aaagtttgctctgatacaaggtctatatttatagt 95  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |    |||||||   |||||||||||||||||||||||||    
T  29203 tgttgcctttttaaacccttgtttcagccccctctatctctctctctctcaaagtttagcctgatacaaggtctatatttatagt 29119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 73 - 1
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctctctcgcaaag-tttgctctgatacaaggtctat 86  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||   | ||||||||||||||||||    
T  73 tgttgcttttctaaacccttgtttcagccccctctatctctctctcaaagaaatactctgatacaaggtctat 1  T

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Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 202 - 272
Target Start/End: Original strand, 57836 - 57905
Alignment:
Q  202 aaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttca 272  Q
    ||||||||||||||||||||  || |||||||| |||||||||||||||||||| |||| |||||||||||    
T  57836 aaaatatatttgcatcaaattttc-ttcatacggtacaaaaatatatttattgttcatacatatattttca 57905  T

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Target: scaffold0008; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 145
Target Start/End: Original strand, 57740 - 57813
Alignment:
Q  72 tgatacaaggtctatatttatagtgaaatataactcataaatttggaacgaatatcacactgaagatacgtttc 145  Q
    ||||||||| | | ||||| ||| ||||||||| ||| |||||||||| | |||| || |||||||||||||||    
T  57740 tgatacaagatatgtatttctagagaaatataattcacaaatttggaatggatattacgctgaagatacgtttc 57813  T

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Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 79891 - 79852
Alignment:
Q  15 tgttgcctttctaaacccttgtttcagccccctctatctc 54  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  79891 tgttgtctttctaaacccttgtttcagccccctctatctc 79852  T

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Target: scaffold0533 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 251
Target Start/End: Original strand, 1971 - 2018
Alignment:
Q  204 aatatatttgcatcaaatcgtccttcatacgatacaaaaatatattta 251  Q
    |||||||||| |||||||  ||||||||| ||||||||||||||||||    
T  1971 aatatatttgtatcaaatattccttcatatgatacaaaaatatattta 2018  T

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Target: scaffold0474 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 10492 - 10443
Alignment:
Q  296 tcttttatatttttagcaacaatattcttcttccatcaaattttgagtca 345  Q
    ||||||||||||||| ||||||| || ||  |||||||||||||||||||    
T  10492 tcttttatatttttaacaacaatcttttttatccatcaaattttgagtca 10443  T

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Target: scaffold0140 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 95
Target Start/End: Complemental strand, 22201 - 22168
Alignment:
Q  62 aagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||| ||||||||||||||||||||||||    
T  22201 aagtttgctttgatacaaggtctatatttatagt 22168  T

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Target: scaffold0140; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 95
Target Start/End: Complemental strand, 24476 - 24443
Alignment:
Q  62 aagtttgctctgatacaaggtctatatttatagt 95  Q
    ||||||||| ||||||||||||||||||||||||    
T  24476 aagtttgctttgatacaaggtctatatttatagt 24443  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 389
Target Start/End: Complemental strand, 35579 - 35547
Alignment:
Q  357 tctcaaccttgactccaaattagtgatgatgtc 389  Q
    |||| ||||||||||||||||||||||||||||    
T  35579 tctccaccttgactccaaattagtgatgatgtc 35547  T

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