View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17024_high_4 (Length: 320)
Name: NF17024_high_4
Description: NF17024
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17024_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 33488764 - 33489063
Alignment:
| Q |
1 |
aaaccctcgattccaatacactctcgtcatctttcagagcttcctcatctttcaacgattttctctcagcagcagaagcacatgaagaagtggaagaaga |
100 |
Q |
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| T |
33488764 |
aaaccctcgattccaatacactctcgtcatctttcagagcttcctcatctttcaacgattttctctcagcagcagaagcacatgaagaagtggaagaaga |
33488863 |
T |
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| Q |
101 |
gggaggatatgcagctaataaagctgtagcattccactcatggttcctaacaagttctgaaaatagaagtatcagtgaagccatattgcaattcaaaaat |
200 |
Q |
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| T |
33488864 |
gggaggatatgcagctaataaagctgtagcattccactcatggttcctaacaagttctgaaaatagaagtatcagtgaagccatattgcaattcaaaaat |
33488963 |
T |
|
| Q |
201 |
ttcaagagatttgtatatagtagttgatgttaaataaaagttgatggttataaagaaagaaaatttcaaaagttatatatagagaatgaaggaatataaa |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33488964 |
ttcaagagatttgtatatagtagttgatgttaaataaaagttgatggtt---aagaaagaaaatttcaaaagttatatatagagaatgaaggaatataaa |
33489060 |
T |
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