View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17025_low_15 (Length: 309)
Name: NF17025_low_15
Description: NF17025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17025_low_15 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 175 - 309
Target Start/End: Complemental strand, 7499433 - 7499299
Alignment:
| Q |
175 |
gcacaagaattacactcgaaaatgatcgaatcatccggtttctccaaaagcttgtcaatggttgtattgcttacacctaaagaggtagcaactatctctc |
274 |
Q |
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| T |
7499433 |
gcacaagaattacactcgaaaatgatcgaatcatccggtttctccaaaagcttgtcaatggttgtattgcttacacctaaagaggtagcaactatctctc |
7499334 |
T |
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| Q |
275 |
tgtctagaatttgcagcacagattctttaccagcc |
309 |
Q |
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| T |
7499333 |
tgtctagaatttgcagcacagattctttaccagcc |
7499299 |
T |
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